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RGD DISEASE ONTOLOGY - ANNOTATIONS

RGD uses the Human Disease Ontology (DO, https://disease-ontology.org/) for disease curation across species. RGD automatically downloads each new release of the ontology on a monthly basis. Some additional terms which are required for RGD's curation purposes but are not currently covered in the official version of DO have been added. As corresponding terms are added to DO, these custom terms are retired and the DO terms substituted in existing annotations and subsequently used for curation.

Term:rapidly progressive glomerulonephritis
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Accession:DOID:4776 term browser browse the term
Synonyms:xref: ICD10CM:N01;   NCI:C35264
For additional species annotation, visit the Alliance of Genome Resources.



show annotations for term's descendants           Sort by:
crescentic glomerulonephritis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CCL2 C-C motif chemokine ligand 2 treatment ISO RGD PMID:8903512 PMID:17314328 RGD:8549743 RGD:8549770 NCBI chr 9:39,008,187...39,009,932 JBrowse link
G CD40 CD40 molecule ISO RGD PMID:14569091 RGD:7248599 NCBI chr24:33,352,992...33,383,488
Ensembl chr24:33,372,930...33,383,301
JBrowse link
G CD40LG CD40 ligand treatment ISO RGD PMID:14569091 RGD:7248599 NCBI chr  X:107,001,421...107,023,007
Ensembl chr  X:107,010,890...107,023,006
JBrowse link
G CSF1R colony stimulating factor 1 receptor treatment ISO RGD PMID:23408165 RGD:151665815 NCBI chr 4:58,980,699...59,010,683
Ensembl chr 4:58,980,788...59,010,510
JBrowse link
G IL1B interleukin 1 beta ISO RGD PMID:19959716 RGD:7175502 NCBI chr17:37,019,329...37,033,388
Ensembl chr17:37,019,329...37,024,458
JBrowse link
G IL1RN interleukin 1 receptor antagonist treatment ISO human protein in a rat model RGD PMID:7637259 RGD:8551712 NCBI chr17:37,236,690...37,250,424
Ensembl chr17:37,212,751...37,249,329
JBrowse link
G JUND JunD proto-oncogene, AP-1 transcription factor subunit ISO RGD PMID:18443593 RGD:2293336 NCBI chr20:44,737,021...44,738,932
Ensembl chr20:44,736,832...44,763,020
JBrowse link
G LOC480600 chemokine (C-C motif) ligand 3 ISO associated with Anti-Neutrophil Cytoplasmic Antibody-Associated Vasculitis RGD PMID:17898087 PMID:18846416 RGD:2307059 RGD:7241813 NCBI chr 9:37,708,561...37,710,209
Ensembl chr 9:37,676,966...37,710,209
JBrowse link
G MMP12 matrix metallopeptidase 12 ISO RGD PMID:12626598 PMID:20488952 RGD:2325762 RGD:737630 NCBI chr 5:28,918,626...28,933,404
Ensembl chr 5:28,918,594...28,933,309
JBrowse link
G MMP3 matrix metallopeptidase 3 (stromelysin 1, progelatinase) ISO RGD PMID:11095647 RGD:7241255 NCBI chr 5:28,949,631...28,957,915
Ensembl chr 5:28,949,631...28,958,222
JBrowse link
G MMP9 matrix metallopeptidase 9 ISO protein:increased expression:renal cortex (rat) RGD PMID:16046515 RGD:2313720 NCBI chr24:33,274,260...33,281,116
Ensembl chr24:33,274,268...33,281,293
JBrowse link
G MTOR mechanistic target of rapamycin kinase ISO RGD PMID:21403644 RGD:7245940 NCBI chr 2:84,818,893...84,939,283
Ensembl chr 2:84,787,708...84,939,114
JBrowse link
G STAT6 signal transducer and activator of transcription 6 ISO RGD PMID:21985369 RGD:7243976 NCBI chr10:1,232,515...1,247,011
Ensembl chr10:1,233,691...1,247,075
JBrowse link
G TLR9 toll like receptor 9 severity ISO RGD PMID:20847283 RGD:7246899 NCBI chr20:37,529,322...37,547,117
Ensembl chr20:37,542,340...37,547,114
Ensembl chr20:37,542,340...37,547,114
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  disease 15758
    disease of anatomical entity 15377
      Immune & Inflammatory Diseases 5195
        Inflammation 2510
          nephritis 407
            glomerulonephritis 355
              rapidly progressive glomerulonephritis 14
                Rapidly Progressive Glomerulonephritis with Pulmonary Hemorrhage 0
                crescentic glomerulonephritis 14
Path 2
Term Annotations click to browse term
  disease 15758
    disease of anatomical entity 15377
      Urogenital Diseases 4910
        urinary system disease 2409
          kidney disease 2168
            nephritis 407
              glomerulonephritis 355
                rapidly progressive glomerulonephritis 14
                  Rapidly Progressive Glomerulonephritis with Pulmonary Hemorrhage 0
                  crescentic glomerulonephritis 14
paths to the root