RGD DISEASE ONTOLOGY - ANNOTATIONS
RGD uses the Human Disease Ontology (DO, https://disease-ontology.org/) for disease curation across species. RGD automatically downloads each new release of the ontology on a monthly basis. Some additional terms which are required for RGD's curation purposes but are not currently covered in the official version of DO have been added. As corresponding terms are added to DO, these custom terms are retired and the DO terms substituted in existing annotations and subsequently used for curation.
Term: skin cancer
Accession: DOID:4159
browse the term
Definition: An integumentary system cancer located_in the skin that is the uncontrolled growth of abnormal skin cells. (DO)
Synonyms: exact_synonym: CA - skin cancer; cancer of skin; cancer of the skin; malignant neoplasm of skin; melanoma and non-melanoma skin cancer; skin cancers
xref: EFO:0004198 ; GARD:10421 ; MONDO:0002898 ; NCI:C2920
For additional species annotation, visit the
Alliance of Genome Resources .
GViewer not supported for the selected species.
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Anxa7
annexin A7
ISO
protein:decreased expression:skin
RGD
PMID:17708571
RGD:2292654
NCBI chrNW_004936521:5,639,193...5,671,369
Ensembl chrNW_004936521:5,651,719...5,671,050
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Chuk
component of inhibitor of nuclear factor kappa B kinase complex
ISO
RGD
PMID:21755017
RGD:13504775
NCBI chrNW_004936636:33,933...78,990
Ensembl chrNW_004936636:33,673...79,194
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Crkl
CRK like proto-oncogene, adaptor protein
ISO
RGD
PMID:16391854
RGD:7488899
NCBI chrNW_004936619:2,447,686...2,479,589
Ensembl chrNW_004936619:2,447,614...2,479,805
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Pml
PML nuclear body scaffold
severity
ISO
human gene in a mouse model
RGD
PMID:19058256
RGD:41404688
NCBI chrNW_004936471:33,135,186...33,173,218
Ensembl chrNW_004936471:33,135,164...33,177,666
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Snai1
snail family transcriptional repressor 1
ISO
MouseDO
NCBI chrNW_004936514:4,456,498...4,462,436
Ensembl chrNW_004936514:4,456,484...4,462,987
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Srsf6
serine and arginine rich splicing factor 6
ISO
protein:increased expression:skin (human)
RGD
PMID:24440982
RGD:11039481
NCBI chrNW_004936530:3,086,944...3,092,780
Ensembl chrNW_004936530:3,086,680...3,092,828
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Abi3bp
ABI family member 3 binding protein
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:36428691
NCBI chrNW_004936630:2,286,089...2,518,588
Ensembl chrNW_004936630:2,286,153...2,517,511
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Acaa2
acetyl-CoA acyltransferase 2
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:36428691
NCBI chrNW_004936497:13,242,644...13,269,007
Ensembl chrNW_004936497:13,242,644...13,269,532
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Acadl
acyl-CoA dehydrogenase long chain
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:36428691
NCBI chrNW_004936845:66,674...96,248
Ensembl chrNW_004936845:66,241...96,249
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Adam23
ADAM metallopeptidase domain 23
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:36428691
NCBI chrNW_004936631:2,777,595...2,946,191
Ensembl chrNW_004936631:2,778,849...2,946,187
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Alcam
activated leukocyte cell adhesion molecule
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:36428691
NCBI chrNW_004936701:895,414...1,084,155
Ensembl chrNW_004936701:895,376...1,084,172
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Alyref
Aly/REF export factor
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:36428691
NCBI chrNW_004936594:5,398,973...5,402,846
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Arid5b
AT-rich interaction domain 5B
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:36428691
NCBI chrNW_004936614:1,072,263...1,252,573
Ensembl chrNW_004936614:1,072,260...1,252,283
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Arpc1b
actin related protein 2/3 complex subunit 1B
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:36428691
NCBI chrNW_004936750:1,651,026...1,662,208
Ensembl chrNW_004936750:1,650,979...1,662,206
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Asip
agouti signaling protein
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:18488027
NCBI chrNW_004936561:6,341,667...6,346,440
Ensembl chrNW_004936561:6,341,623...6,346,458
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Atf2
activating transcription factor 2
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:36428691
NCBI chrNW_004936509:4,729,984...4,826,367
Ensembl chrNW_004936509:4,732,930...4,826,443
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Atp5pb
ATP synthase peripheral stalk-membrane subunit b
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:36428691
NCBI chrNW_004936690:120,572...135,509
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Bap1
BRCA1 associated deubiquitinase 1
ISO
CTD Direct Evidence: marker/mechanism
RGD CTD
PMID:25080371 PMID:26719535
RGD:9586038
NCBI chrNW_004936473:3,239,009...3,247,806
Ensembl chrNW_004936473:3,239,010...3,247,806
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Basp1
brain abundant membrane attached signal protein 1
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:36428691
NCBI chrNW_004936480:19,695,949...19,812,681
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Bnc2
basonuclin zinc finger protein 2
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:36428691
NCBI chrNW_004936771:747,487...1,036,546
Ensembl chrNW_004936771:747,496...1,036,122
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C1qa
complement C1q A chain
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:36428691
NCBI chrNW_004936474:8,007,953...8,010,591
Ensembl chrNW_004936474:8,008,534...8,010,191
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C1qtnf1
C1q and TNF related 1
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:36428691
NCBI chrNW_004936594:3,338,863...3,358,137
Ensembl chrNW_004936594:3,338,774...3,358,985
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Cav1
caveolin 1
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:36428691
NCBI chrNW_004936589:2,504,235...2,536,778
Ensembl chrNW_004936589:2,504,224...2,537,170
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Ccdc152
coiled-coil domain containing 152
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:36428691
NCBI chrNW_004936518:167,017...208,187
Ensembl chrNW_004936518:167,017...208,187
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Ccnh
cyclin H
ISO
ClinVar Annotator: match by term: BCC1 | ClinVar Annotator: match by term: Basal cell carcinoma, somatic | ClinVar Annotator: match by term: Basal cell carcinoma, susceptibility to, 1 | ClinVar Annotator: match by term: RASA1-related condition
ClinVar
PMID:8275088 PMID:9219684 PMID:15574420 PMID:18363760 PMID:18446851 PMID:24038909 PMID:24274751 PMID:25040287 PMID:25741868 PMID:27081547 PMID:28295764 PMID:28492532 PMID:28655553 PMID:29891884 PMID:33248299 PMID:36980822 More...
NCBI chrNW_004936469:5,933,163...5,952,190
Ensembl chrNW_004936469:5,935,131...5,952,460
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Chchd7
coiled-coil-helix-coiled-coil-helix domain containing 7
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:36428691
NCBI chrNW_004936496:2,855,944...2,862,422
Ensembl chrNW_004936496:2,855,898...2,865,185
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Chd3
chromodomain helicase DNA binding protein 3
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:36428691
NCBI chrNW_004936595:1,131,198...1,154,615
Ensembl chrNW_004936595:1,130,078...1,157,822
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Chga
chromogranin A
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:36428691
NCBI chrNW_004936733:915,700...927,220
Ensembl chrNW_004936733:915,830...927,409
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Clptm1l
CLPTM1 like
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:19151717
NCBI chrNW_004936815:421,996...445,577
Ensembl chrNW_004936815:428,920...445,750
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Creb5
cAMP responsive element binding protein 5
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:36428691
NCBI chrNW_004936478:5,184,157...5,319,176
Ensembl chrNW_004936478:4,924,489...5,319,844
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Crnkl1
crooked neck pre-mRNA splicing factor 1
ISO
DNA:missense mutation:cds:p.S128F (human)
RGD
PMID:23774526
RGD:9850250
NCBI chrNW_004936485:328,077...351,323
Ensembl chrNW_004936485:327,835...350,132
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Cspg4
chondroitin sulfate proteoglycan 4
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:36428691
NCBI chrNW_004936471:34,438,676...34,475,005
Ensembl chrNW_004936471:34,438,676...34,475,052
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Ctcf
CCCTC-binding factor
ISO
DNA:mutations:multiple (human)
RGD
PMID:27974201
RGD:151356739
NCBI chrNW_004936475:17,987,137...18,031,733
Ensembl chrNW_004936475:17,987,156...18,031,760
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Ctla4
cytotoxic T-lymphocyte associated protein 4
susceptibility
ISO
DNA:SNP: :rs3087243(human)
RGD
PMID:19622768
RGD:7411686
NCBI chrNW_004936631:484,356...489,643
Ensembl chrNW_004936631:484,356...489,643
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Dclre1a
DNA cross-link repair 1A
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:36428691
NCBI chrNW_004936486:4,199,527...4,221,984
Ensembl chrNW_004936486:4,199,410...4,221,761
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Dcp1b
decapping mRNA 1B
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:36428691
NCBI chrNW_004936606:2,145,289...2,196,157
Ensembl chrNW_004936606:2,145,260...2,196,193
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Dhx15
DEAH-box helicase 15
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:36428691
NCBI chrNW_004936477:4,797,345...4,844,804
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Dio2
iodothyronine deiodinase 2
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:36428691
NCBI chrNW_004936488:8,769,555...8,783,157
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Dsc2
desmocollin 2
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:36428691
NCBI chrNW_004936682:2,057,331...2,091,034
Ensembl chrNW_004936682:2,057,190...2,164,429
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Dusp10
dual specificity phosphatase 10
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:36428691
NCBI chrNW_004936650:679,650...718,867
Ensembl chrNW_004936650:679,647...720,038
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Edn1
endothelin 1
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:36428691
NCBI chrNW_004936534:885,489...892,292
Ensembl chrNW_004936534:885,287...891,772
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Elk3
ETS transcription factor ELK3
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:36428691
NCBI chrNW_004936507:12,244,163...12,307,621
Ensembl chrNW_004936507:12,244,163...12,307,623
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Erbb2
erb-b2 receptor tyrosine kinase 2
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:26950094
NCBI chrNW_004936490:14,887,062...14,910,038
Ensembl chrNW_004936490:14,887,043...14,909,956
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Fam234a
family with sequence similarity 234 member A
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:36428691
NCBI chrNW_004936501:648,859...679,012
Ensembl chrNW_004936501:649,017...656,930
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Farp1
FERM, ARH/RhoGEF and pleckstrin domain protein 1
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:36428691
NCBI chrNW_004936472:11,891,234...12,100,202
Ensembl chrNW_004936472:11,887,767...12,100,242
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Fbn3
fibrillin 3
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:36428691
NCBI chrNW_004936588:5,000,128...5,054,177
Ensembl chrNW_004936588:5,000,645...5,054,228
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Fbxw7
F-box and WD repeat domain containing 7
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:26950094
NCBI chrNW_004936689:2,261,163...2,449,951
Ensembl chrNW_004936689:2,259,477...2,344,764
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Fmo2
flavin containing dimethylaniline monoxygenase 2
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:36428691
NCBI chrNW_004936481:15,885,375...15,910,216
Ensembl chrNW_004936481:15,885,280...15,910,267
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Fnbp1l
formin binding protein 1 like
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:36428691
NCBI chrNW_004936537:5,671,517...5,789,480
Ensembl chrNW_004936537:5,671,331...5,790,054
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Fscn1
fascin actin-bundling protein 1
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:36428691
NCBI chrNW_004936765:609,894...619,417
Ensembl chrNW_004936765:609,861...619,456
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Galnt15
polypeptide N-acetylgalactosaminyltransferase 15
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:36428691
NCBI chrNW_004936473:8,974,884...9,016,222
Ensembl chrNW_004936473:8,975,948...9,016,228
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Gjb6
gap junction protein beta 6
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:36428691
NCBI chrNW_004936720:1,485,895...1,494,673
Ensembl chrNW_004936720:1,493,733...1,494,518
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Gli2
GLI family zinc finger 2
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:10700170 PMID:36428691
NCBI chrNW_004936469:49,616,552...49,788,760
Ensembl chrNW_004936469:49,617,095...49,673,213
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Gpx8
glutathione peroxidase 8 (putative)
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:36428691
NCBI chrNW_004936480:12,600,010...12,604,411
Ensembl chrNW_004936480:12,597,933...12,604,470
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Grm5
glutamate metabotropic receptor 5
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:36428691
NCBI chrNW_004936736:623,118...1,060,273
Ensembl chrNW_004936736:623,013...1,064,054
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Gtf2i
general transcription factor IIi
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:36428691
NCBI chrNW_004936543:3,521,763...3,611,410
Ensembl chrNW_004936543:3,518,462...3,611,452
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Hhip
hedgehog interacting protein
treatment
ISO
mRNA:increased expression:skin:
RGD
PMID:15024045
RGD:11552592
NCBI chrNW_004936535:4,210,305...4,305,930
Ensembl chrNW_004936535:4,210,305...4,305,930
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Ift88
intraflagellar transport 88
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:36428691
NCBI chrNW_004936720:1,041,216...1,168,725
Ensembl chrNW_004936720:1,041,211...1,168,748
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Igf2bp1
insulin like growth factor 2 mRNA binding protein 1
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:36428691
NCBI chrNW_004936490:12,430,343...12,468,794
Ensembl chrNW_004936490:12,430,008...12,469,083
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Igf2bp2
insulin like growth factor 2 mRNA binding protein 2
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:36428691
NCBI chrNW_004936578:4,070,997...4,222,661
Ensembl chrNW_004936578:4,070,955...4,222,427
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Il6
interleukin 6
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:22108589
NCBI chrNW_004936549:7,015,595...7,016,246
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Inpp4a
inositol polyphosphate-4-phosphatase type I A
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:36428691
NCBI chrNW_004936744:1,629,432...1,692,069
Ensembl chrNW_004936744:1,629,438...1,693,141
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Irs4
insulin receptor substrate 4
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:36428691
NCBI chrNW_004936499:6,111,422...6,127,487
Ensembl chrNW_004936499:6,111,487...6,115,272
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Irx1
iroquois homeobox 1
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:36428691
NCBI chrNW_004936634:3,130,197...3,135,273
Ensembl chrNW_004936634:3,130,167...3,135,537
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Jun
Jun proto-oncogene, AP-1 transcription factor subunit
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:36428691
NCBI chrNW_004936522:3,034,364...3,037,632
Ensembl chrNW_004936522:3,035,346...3,036,350
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Krt5
keratin 5
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:19578363 PMID:20871598
NCBI chrNW_004936512:9,923,593...9,929,517
Ensembl chrNW_004936512:9,922,523...9,929,517
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Lats1
large tumor suppressor kinase 1
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:26950094
NCBI chrNW_004936489:2,607,114...2,649,879
Ensembl chrNW_004936489:2,605,195...2,649,879
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Lef1
lymphoid enhancer binding factor 1
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:36428691
NCBI chrNW_004936818:453,635...569,194
Ensembl chrNW_004936818:453,635...567,469
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Lgr5
leucine rich repeat containing G protein-coupled receptor 5
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:36428691
NCBI chrNW_004936568:530,314...662,524
Ensembl chrNW_004936568:530,188...663,520
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Litaf
lipopolysaccharide induced TNF factor
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:36428691
NCBI chrNW_004936530:9,409,378...9,421,974
Ensembl chrNW_004936530:9,409,692...9,421,974
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Lman1
lectin, mannose binding 1
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:36428691
NCBI chrNW_004936497:5,383,636...5,409,347
Ensembl chrNW_004936497:5,383,524...5,408,452
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LOC101967386
cytochrome c oxidase assembly factor 7
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:36428691
NCBI chrNW_004936522:8,291,293...8,309,949
Ensembl chrNW_004936522:8,291,279...8,310,266
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LOC101968645
THAP domain-containing protein 2
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:36428691
NCBI chrNW_004936568:748,020...769,813
Ensembl chrNW_004936568:731,218...745,493 Ensembl chrNW_004936568:731,218...745,493
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LOC101972068
cytochrome c oxidase assembly factor 3 homolog, mitochondrial
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:36428691
NCBI chrNW_004936490:17,508,663...17,509,538
Ensembl chrNW_004936490:17,508,663...17,509,582
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LOC101972766
tubulin alpha-1A chain
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:36428691
NCBI chrNW_004936512:6,959,656...6,964,299
Ensembl chrNW_004936512:6,958,985...6,964,299
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Lpl
lipoprotein lipase
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:36428691
NCBI chrNW_004936555:4,084,099...4,108,219
Ensembl chrNW_004936555:4,084,099...4,108,365
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Lrig3
leucine rich repeats and immunoglobulin like domains 3
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:36428691
NCBI chrNW_004936646:2,889,331...2,929,836
Ensembl chrNW_004936646:2,886,069...2,929,552
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Lrrcc1
leucine rich repeat and coiled-coil centrosomal protein 1
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:36428691
NCBI chrNW_004936544:78,450...114,341
Ensembl chrNW_004936544:78,440...114,314
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Ltbp1
latent transforming growth factor beta binding protein 1
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:36428691
NCBI chrNW_004936493:253,390...640,140
Ensembl chrNW_004936493:253,216...640,140
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Marcksl1
MARCKS like 1
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:36428691
NCBI chrNW_004936474:15,351,599...15,354,285
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Mc1r
melanocortin 1 receptor
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:18539553
NCBI chrNW_004936641:193,885...198,730
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Mex3a
mex-3 RNA binding family member A
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:36428691
NCBI chrNW_004936580:5,334,026...5,339,536
Ensembl chrNW_004936580:5,334,575...5,339,507
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Mgat5
alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:36428691
NCBI chrNW_004936469:57,615,755...57,875,156
Ensembl chrNW_004936469:57,674,982...57,875,107
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Mmp11
matrix metallopeptidase 11
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:36428691
NCBI chrNW_004936619:1,309,013...1,320,062
Ensembl chrNW_004936619:1,310,846...1,320,062
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Mpped1
metallophosphoesterase domain containing 1
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:36428691
NCBI chrNW_004936718:1,217,066...1,283,558
Ensembl chrNW_004936718:1,217,166...1,282,978
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Mycn
MYCN proto-oncogene, bHLH transcription factor
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:26950094
NCBI chrNW_004936493:14,618,176...14,624,201
Ensembl chrNW_004936493:14,618,060...14,624,315
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Myh9
myosin heavy chain 9
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:36428691
NCBI chrNW_004936492:4,384,215...4,466,229
Ensembl chrNW_004936492:4,384,215...4,466,262
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Nnmt
nicotinamide N-methyltransferase
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:36428691
NCBI chrNW_004936612:333,421...351,202
Ensembl chrNW_004936612:333,421...351,202
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Nudcd1
NudC domain containing 1
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:36428691
NCBI chrNW_004936470:35,649,752...35,709,569
Ensembl chrNW_004936470:35,649,742...35,711,985
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Nxn
nucleoredoxin
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:36428691
NCBI chrNW_004936538:6,966,296...6,995,691
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Oca2
OCA2 melanosomal transmembrane protein
susceptibility
ISO
DNA:missense mutation:cds:p.R419Q (rs1800407) (human) DNA:snps:intron:IVS1+132A>G (rs7495174), IVS1+8550A>G (rs11855019), IVS1+15605G>A (rs7174027) (human)
RGD
PMID:19384953 PMID:21270109
RGD:9491840 RGD:9491841
NCBI chrNW_004936471:38,612,450...38,952,150
Ensembl chrNW_004936471:38,612,427...38,952,199
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Ogg1
8-oxoguanine DNA glycosylase
no_association
ISO
DNA:missense mutation: :p.S326C (rs1052133)(human)
RGD
PMID:15466987 PMID:22436579
RGD:8657137 RGD:8657158
NCBI chrNW_004936602:3,411,106...3,418,826
Ensembl chrNW_004936602:3,413,282...3,418,831
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Oscp1
organic solute carrier partner 1
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:36428691
NCBI chrNW_004936474:18,832,866...18,864,540
Ensembl chrNW_004936474:18,830,650...18,864,713
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Palb2
partner and localizer of BRCA2
ISO
ClinVar Annotator: match by term: Basal cell carcinoma
ClinVar
PMID:17200668 PMID:17200671 PMID:17200672 PMID:24136930 PMID:25099575 PMID:25741868 PMID:27878467 PMID:28135048 PMID:28423363 PMID:28492532 PMID:28779002 PMID:32339256 PMID:32566746 PMID:33471991 More...
NCBI chrNW_004936501:8,246,927...8,273,258
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Palm
paralemmin
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:36428691
NCBI chrNW_004936588:270,431...283,925
Ensembl chrNW_004936588:270,425...283,974
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Peli2
pellino E3 ubiquitin protein ligase family member 2
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:36428691
NCBI chrNW_004936495:895,903...1,011,486
Ensembl chrNW_004936495:875,645...1,012,081
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Pik3ca
phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:26950094
NCBI chrNW_004936566:3,924,013...3,951,052
Ensembl chrNW_004936566:3,923,934...3,951,073
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Plag1
PLAG1 zinc finger
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:36428691
NCBI chrNW_004936496:2,809,878...2,855,515
Ensembl chrNW_004936496:2,814,583...2,855,527
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Pnma1
PNMA family member 1
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:36428691
NCBI chrNW_004936488:2,992,021...2,994,647
Ensembl chrNW_004936488:2,992,828...2,993,889
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Ppp6c
protein phosphatase 6 catalytic subunit
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:26950094
NCBI chrNW_004936487:13,284,652...13,320,936
Ensembl chrNW_004936487:13,283,931...13,321,526
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Procr
protein C receptor
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:36428691
NCBI chrNW_004936561:5,557,640...5,562,981
Ensembl chrNW_004936561:5,557,630...5,563,030
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Ptch1
patched 1
disease_progression
ISO
ClinVar Annotator: match by term: Basal cell carcinoma | ClinVar Annotator: match by term: Basal cell carcinoma, somatic | ClinVar Annotator: match by term: Basal cell carcinoma, susceptibility to, 1 | ClinVar Annotator: match by term: Basal cell carcinoma, susceptibility to, 7 ClinVar Annotator: match by term: BCC1 | ClinVar Annotator: match by term: Basal cell carcinoma | ClinVar Annotator: match by term: Basal cell carcinoma, somatic | ClinVar Annotator: match by term: Basal cell carcinoma, susceptibility to, 1 | ClinVar Annotator: match by term: Basal cell carcinoma, susceptibility to, 7 mRNA:increased expression:skin of body
ClinVar OMIM RGD
PMID:8782823 PMID:8840969 PMID:9620294 PMID:10504535 PMID:11231326 PMID:11941477 PMID:12925203 PMID:15712338 PMID:16301862 PMID:16419085 PMID:16508594 PMID:17096318 PMID:18510667 PMID:22703879 PMID:23951062 PMID:24728327 PMID:24807215 PMID:25326637 PMID:25637381 PMID:25741868 PMID:26467025 PMID:26580448 PMID:27153395 PMID:28492532 PMID:28495808 PMID:29205322 PMID:29212164 PMID:29575684 PMID:29654263 PMID:30093976 PMID:30102335 PMID:30411536 PMID:31613886 PMID:31645765 PMID:32409749 PMID:33270637 PMID:33332384 PMID:33674644 More...
RGD:12801453
NCBI chrNW_004936626:4,241,993...4,301,919
Ensembl chrNW_004936626:4,241,908...4,309,476
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Ptch2
patched 2
ISO
ClinVar Annotator: match by term: BCC1 | ClinVar Annotator: match by term: Basal cell carcinoma, somatic | ClinVar Annotator: match by term: Basal cell carcinoma, susceptibility to, 1 | ClinVar Annotator: match by term: PTCH2-related condition
OMIM ClinVar
PMID:9536098 PMID:9931336 PMID:17576681 PMID:25741868 PMID:28492532 PMID:31945512 More...
NCBI chrNW_004936474:26,052,277...26,069,500
Ensembl chrNW_004936474:26,052,305...26,069,312
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Ptpn14
protein tyrosine phosphatase non-receptor type 14
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:26950094
NCBI chrNW_004936628:3,739,223...3,916,157
Ensembl chrNW_004936628:3,739,152...3,907,662
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Pycr2
pyrroline-5-carboxylate reductase 2
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:36428691
NCBI chrNW_004936526:2,721,579...2,726,699
Ensembl chrNW_004936526:2,720,521...2,726,762
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Rab28
RAB28, member RAS oncogene family
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:36428691
NCBI chrNW_004936477:14,066,063...14,140,310
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Rac3
Rac family small GTPase 3
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:36428691
NCBI chrNW_004936594:5,527,788...5,530,694
Ensembl chrNW_004936594:5,528,908...5,531,420
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Rasa1
RAS p21 protein activator 1
ISO
ClinVar Annotator: match by term: BCC1 | ClinVar Annotator: match by term: Basal cell carcinoma, somatic | ClinVar Annotator: match by term: Basal cell carcinoma, susceptibility to, 1 | ClinVar Annotator: match by term: RASA1-related condition
OMIM ClinVar
PMID:8275088 PMID:9219684 PMID:15574420 PMID:18363760 PMID:18446851 PMID:22200646 PMID:23801933 PMID:24038909 PMID:24274751 PMID:25040287 PMID:25741868 PMID:27081547 PMID:28295764 PMID:28492532 PMID:28655553 PMID:29891884 PMID:33248299 PMID:36980822 More...
NCBI chrNW_004936469:5,839,560...5,933,049
Ensembl chrNW_004936469:5,839,743...5,932,021
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Rb1
RB transcriptional corepressor 1
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:26950094
NCBI chrNW_004936565:1,596,227...1,746,706
Ensembl chrNW_004936565:1,597,593...1,746,846
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Rbp1
retinol binding protein 1
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:36428691
NCBI chrNW_004936540:1,600,673...1,626,573
Ensembl chrNW_004936540:1,600,398...1,626,652
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Rgcc
regulator of cell cycle
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:36428691
NCBI chrNW_004936667:232,807...245,131
Ensembl chrNW_004936667:232,782...245,131
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Rock1
Rho associated coiled-coil containing protein kinase 1
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:36428691
NCBI chrNW_004936550:730,462...874,601
Ensembl chrNW_004936550:733,239...874,601
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Rpe65
retinoid isomerohydrolase RPE65
ISO
mRNA:increased expression:skin (human)
RGD
PMID:16181461
RGD:9495923
NCBI chrNW_004936591:3,347,346...3,368,062
Ensembl chrNW_004936591:3,347,272...3,368,015
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Runx1t1
RUNX1 partner transcriptional co-repressor 1
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:36428691
NCBI chrNW_004936544:5,381,829...5,514,364
Ensembl chrNW_004936544:5,383,350...5,522,018
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Scamp5
secretory carrier membrane protein 5
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:36428691
NCBI chrNW_004936471:33,936,721...33,958,439
Ensembl chrNW_004936471:33,936,531...33,958,573 Ensembl chrNW_004936471:33,936,531...33,958,573
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Setbp1
SET binding protein 1
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:36428691
NCBI chrNW_004936517:1,616,169...1,798,002
Ensembl chrNW_004936517:1,616,169...1,970,398
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Sh3bp4
SH3 domain binding protein 4
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:36428691
NCBI chrNW_004936525:2,693,828...2,757,480
Ensembl chrNW_004936525:2,692,786...2,707,177
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Shh
sonic hedgehog signaling molecule
ISO
DNA, protein:hypermethylation, decreased expression:skin of body
RGD
PMID:23284750
RGD:12801452
NCBI chrNW_004936527:10,033,095...10,042,713
Ensembl chrNW_004936527:10,033,299...10,042,599
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Shox2
SHOX homeobox 2
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:36428691
NCBI chrNW_004936519:4,810,777...4,818,733
Ensembl chrNW_004936519:4,809,687...4,818,792
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Slc45a2
solute carrier family 45 member 2
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:19578363
NCBI chrNW_004936518:7,094,949...7,139,961
Ensembl chrNW_004936518:7,095,038...7,137,277
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Slc7a2
solute carrier family 7 member 2
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:36428691
NCBI chrNW_004936614:111,625...184,571
Ensembl chrNW_004936614:157,828...184,583
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Slco2a1
solute carrier organic anion transporter family member 2A1
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:36428691
NCBI chrNW_004936529:7,069,003...7,155,229
Ensembl chrNW_004936529:7,068,970...7,155,950
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Smo
smoothened, frizzled class receptor
disease_progression
ISO
mRNA:increased expression:skin of body ClinVar Annotator: match by term: BCC1 | ClinVar Annotator: match by term: Basal cell carcinoma, somatic
RGD ClinVar OMIM
PMID:9422511 PMID:10504535 PMID:25741868 PMID:28492532
RGD:12801453
NCBI chrNW_004936579:5,893,064...5,917,021
Ensembl chrNW_004936579:5,892,542...5,917,281
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Sobp
sine oculis binding protein homolog
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:36428691
NCBI chrNW_004936564:3,855,526...4,000,809
Ensembl chrNW_004936564:3,855,672...3,982,401
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Sox18
SRY-box transcription factor 18
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:36428691
NCBI chrNW_004936514:11,231,327...11,233,292
Ensembl chrNW_004936514:11,231,305...11,233,337
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Spon2
spondin 2
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:36428691
NCBI chrNW_004936477:22,087,450...22,093,677
Ensembl chrNW_004936477:22,087,394...22,093,723
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Srgap1
SLIT-ROBO Rho GTPase activating protein 1
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:36428691
NCBI chrNW_004936545:2,277,449...2,557,330
Ensembl chrNW_004936545:2,278,290...2,552,552
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Ssr3
signal sequence receptor subunit 3
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:36428691
NCBI chrNW_004936519:3,556,103...3,571,706
Ensembl chrNW_004936519:3,555,224...3,571,638
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Stmn1
stathmin 1
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:36428691
NCBI chrNW_004936474:10,470,006...10,475,557
Ensembl chrNW_004936474:10,468,728...10,475,594
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Sufu
SUFU negative regulator of hedgehog signaling
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:26950094
NCBI chrNW_004936600:3,270,662...3,381,722
Ensembl chrNW_004936600:3,268,260...3,381,781
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Synj1
synaptojanin 1
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:36428691
NCBI chrNW_004936500:9,484,571...9,565,980
Ensembl chrNW_004936500:9,484,586...9,566,100
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Tbx1
T-box transcription factor 1
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:36428691
NCBI chrNW_004936619:3,662,567...3,670,470
Ensembl chrNW_004936619:3,664,468...3,670,525
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Tert
telomerase reverse transcriptase
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:19151717
NCBI chrNW_004936815:468,987...492,666
Ensembl chrNW_004936815:469,020...491,697
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Tgfb2
transforming growth factor beta 2
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:36428691
NCBI chrNW_004936628:310,720...394,002
Ensembl chrNW_004936628:308,691...394,007
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Tgs1
trimethylguanosine synthase 1
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:36428691
NCBI chrNW_004936496:2,484,700...2,524,650
Ensembl chrNW_004936496:2,484,864...2,524,540
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Tm4sf1
transmembrane 4 L six family member 1
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:36428691
NCBI chrNW_004936519:6,306,281...6,314,045
Ensembl chrNW_004936519:6,305,881...6,314,113
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Tmco3
transmembrane and coiled-coil domains 3
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:36428691
NCBI chrNW_004936472:248,518...285,724
Ensembl chrNW_004936472:248,979...280,977
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Tmem104
transmembrane protein 104
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:36428691
NCBI chrNW_004936594:142,820...195,223
Ensembl chrNW_004936594:142,786...195,254
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Tmem170a
transmembrane protein 170A
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:36428691
NCBI chrNW_004936475:24,168,798...24,184,519
Ensembl chrNW_004936475:24,169,224...24,184,505
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Tmem176b
transmembrane protein 176B
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:36428691
NCBI chrNW_004936527:6,258,858...6,269,604
Ensembl chrNW_004936527:6,258,856...6,264,323
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Tp53
tumor protein p53
ISO
ClinVar Annotator: match by term: Basal cell carcinoma, susceptibility to, 1 | ClinVar Annotator: match by term: Basal cell carcinoma, susceptibility to, 7
OMIM ClinVar
PMID:1565143 PMID:1565144 PMID:1591732 PMID:1631137 PMID:1683921 PMID:1975675 PMID:1978757 PMID:1999338 PMID:2046748 PMID:2932480 PMID:4122735 PMID:7565304 PMID:7732013 PMID:7783166 PMID:7887414 PMID:8023157 PMID:8062826 PMID:8118819 PMID:8164043 PMID:8242752 PMID:8308926 PMID:8401536 PMID:8423216 PMID:8425176 PMID:8479749 PMID:8550239 PMID:8633021 PMID:8649776 PMID:8718514 PMID:8825920 PMID:9047394 PMID:9218725 PMID:9242456 PMID:9364015 PMID:9399838 PMID:9407971 PMID:9546439 PMID:9569050 PMID:9582268 PMID:9607760 PMID:9627118 PMID:9662334 PMID:9667734 PMID:9704930 PMID:9704931 PMID:9891044 PMID:10229196 PMID:10411893 PMID:10432928 PMID:10486318 PMID:10519380 PMID:10589545 PMID:10797439 PMID:10802655 PMID:10864200 PMID:10922393 PMID:11101847 PMID:11139324 PMID:11180592 PMID:11370630 PMID:11403041 PMID:11479205 PMID:11481490 PMID:11521785 PMID:11600572 PMID:11753428 PMID:11782540 PMID:11793474 PMID:12007217 PMID:12019170 PMID:12567188 PMID:12619118 PMID:12672316 PMID:12826609 PMID:12885464 PMID:12917626 PMID:14743206 PMID:15004724 PMID:15037740 PMID:15121773 PMID:15355915 PMID:15381368 PMID:15390294 PMID:15607980 PMID:15607981 PMID:15722483 PMID:15741269 PMID:15781620 PMID:15925506 PMID:15951970 PMID:15977174 PMID:16033918 PMID:16199549 PMID:16258005 PMID:16401470 PMID:16489069 PMID:16494995 PMID:16551709 PMID:16682957 PMID:16750598 PMID:16818505 PMID:16861262 PMID:16933305 PMID:16964264 PMID:16969106 PMID:17015838 PMID:17308077 PMID:17311302 PMID:17535973 PMID:17540308 PMID:17567834 PMID:17599946 PMID:17606709 PMID:17636407 PMID:17638920 PMID:17940213 PMID:18248785 PMID:18270399 PMID:18307025 PMID:18373486 PMID:18391940 PMID:18511570 PMID:18685109 PMID:18940924 PMID:19046423 PMID:19101993 PMID:19127115 PMID:19367569 PMID:19454241 PMID:19468865 PMID:19521721 PMID:19556618 PMID:19711436 PMID:19714490 PMID:19717094 PMID:19877175 PMID:19881536 PMID:20028212 PMID:20113312 PMID:20127978 PMID:20128691 PMID:20301488 PMID:20407015 PMID:20436704 PMID:20455025 PMID:20516128 PMID:20520810 PMID:20522432 PMID:20586629 PMID:20593220 PMID:20689556 PMID:20693561 PMID:20805372 PMID:21113594 PMID:21118481 PMID:21187651 PMID:21192060 PMID:21305319 PMID:21343334 PMID:21356188 PMID:21440489 PMID:21445056 PMID:21445348 PMID:21464421 PMID:21468523 PMID:21484931 PMID:21519010 PMID:21535297 PMID:21552135 PMID:21601526 PMID:21619694 PMID:21630152 PMID:21665182 PMID:21665242 PMID:21672450 PMID:21761402 PMID:21946351 PMID:22004116 PMID:22006311 PMID:22110706 PMID:22114072 PMID:22186996 PMID:22233476 PMID:22455664 PMID:22619358 PMID:22672556 PMID:22698404 PMID:22703879 PMID:22706378 PMID:22729912 PMID:22744426 PMID:22800615 PMID:22811390 PMID:22822097 PMID:22869713 PMID:22887876 PMID:22899716 PMID:22915647 PMID:22923379 PMID:23031740 PMID:23056559 PMID:23161690 PMID:23172776 PMID:23175693 PMID:23246812 PMID:23259501 PMID:23263379 PMID:23469205 PMID:23484829 PMID:23515929 PMID:23538418 PMID:23570263 PMID:23571737 PMID:23624782 PMID:23630318 PMID:23639312 PMID:23733769 PMID:23742673 PMID:23792586 PMID:23794094 PMID:23887774 PMID:23894400 PMID:24033266 PMID:24065105 PMID:24076587 PMID:24122735 PMID:24381225 PMID:24382691 PMID:24487413 PMID:24501221 PMID:24573247 PMID:24590827 PMID:24634504 PMID:24641375 PMID:24651012 PMID:24677579 PMID:24702488 PMID:24728327 PMID:24764719 PMID:24810334 PMID:24835218 PMID:24884479 PMID:24936644 PMID:25059482 PMID:25157968 PMID:25256166 PMID:25326637 PMID:25404506 PMID:25422255 PMID:25516983 PMID:25584008 PMID:25612911 PMID:25736369 PMID:25741868 PMID:25765855 PMID:25773284 PMID:25787918 PMID:25896519 PMID:25907361 PMID:25945745 PMID:25952993 PMID:26014290 PMID:26205489 PMID:26225655 PMID:26230955 PMID:26332594 PMID:26425688 PMID:26452166 PMID:26467025 PMID:26572807 PMID:26580448 PMID:26585234 PMID:26619011 PMID:26681051 PMID:26681312 PMID:26681682 PMID:26718964 PMID:26786923 PMID:26822237 PMID:26823150 PMID:26845104 PMID:26911350 PMID:27022024 PMID:27081505 PMID:27101110 PMID:27146902 PMID:27147571 PMID:27153395 PMID:27189670 PMID:27223487 PMID:27276561 PMID:27328919 PMID:27374712 PMID:27463065 PMID:27501770 PMID:27516001 PMID:27601191 PMID:27616075 PMID:27621308 PMID:27663983 PMID:27680515 PMID:27683180 PMID:27714481 PMID:27895058 PMID:27959731 PMID:27993330 PMID:28152038 PMID:28154273 PMID:28279309 PMID:28349240 PMID:28369373 PMID:28387921 PMID:28453743 PMID:28453760 PMID:28472496 PMID:28492532 PMID:28573494 PMID:28664506 PMID:28724667 PMID:28756477 PMID:28861920 PMID:28864397 PMID:28873162 PMID:28968711 PMID:28975465 PMID:28984303 PMID:29070607 PMID:29300620 PMID:29324801 PMID:29392648 PMID:29478780 PMID:29489754 PMID:29522266 PMID:29922827 PMID:29956451 PMID:29979965 PMID:30042151 PMID:30076369 PMID:30092803 PMID:30107858 PMID:30147334 PMID:30224644 PMID:30287823 PMID:30327374 PMID:30352134 PMID:30588330 PMID:30596752 PMID:30816478 PMID:30840781 PMID:30982232 PMID:31081129 PMID:31105275 PMID:31321604 PMID:31494577 PMID:31567591 PMID:31742824 PMID:31744167 PMID:31748977 PMID:31775759 PMID:31882575 PMID:31978118 PMID:31983162 PMID:32000721 PMID:32039725 PMID:32156018 PMID:32292755 PMID:32427313 PMID:32475984 PMID:32592449 PMID:32658383 PMID:32671623 PMID:32817165 PMID:32832836 PMID:32888145 PMID:32906206 PMID:32986223 PMID:33087929 PMID:33163847 PMID:33245408 PMID:33257846 PMID:33258288 PMID:33300245 PMID:33372952 PMID:33471991 PMID:33603772 PMID:33637564 PMID:33840814 PMID:34088725 PMID:34240179 PMID:34299313 PMID:34503094 PMID:34529667 PMID:34540492 PMID:34670578 PMID:34709361 PMID:34885220 PMID:35043155 PMID:35367578 PMID:35802772 PMID:35974385 PMID:36003761 PMID:36008825 PMID:36309086 PMID:36329109 PMID:36988593 More...
NCBI chrNW_004936595:919,807...935,367
Ensembl chrNW_004936595:919,428...925,425
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Tril
TLR4 interactor with leucine rich repeats
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:36428691
NCBI chrNW_004936478:5,453,532...5,459,071
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Tyr
tyrosinase
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:18488027
NCBI chrNW_004936736:421,623...519,085
Ensembl chrNW_004936736:421,598...519,253
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Ubac2
UBA domain containing 2
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:36428691
NCBI chrNW_004936472:11,118,227...11,278,636
Ensembl chrNW_004936472:11,118,218...11,277,301
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Ust
uronyl 2-sulfotransferase
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:36428691
NCBI chrNW_004936489:1,866,792...2,133,558
Ensembl chrNW_004936489:1,867,249...2,134,874
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Vash2
vasohibin 2
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:36428691
NCBI chrNW_004936557:622,947...661,495
Ensembl chrNW_004936557:623,934...661,857
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Vcan
versican
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:36428691
NCBI chrNW_004936469:2,585,142...2,688,029
Ensembl chrNW_004936469:2,585,134...2,688,029
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Vdr
vitamin D receptor
ISO
mRNA:increased expression:skin DNA:SNPs, haplotype: :rs731236, rs7975232 (human)
RGD
PMID:15077124 PMID:22213323
RGD:8158063 RGD:8158076
NCBI chrNW_004936512:5,741,836...5,800,999
Ensembl chrNW_004936512:5,740,748...5,801,109
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Vps37d
VPS37D subunit of ESCRT-I
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:36428691
NCBI chrNW_004936543:2,887,723...2,890,907
Ensembl chrNW_004936543:2,887,708...2,890,946
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Whr1
winged helix repair factor 1
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:26950094
NCBI chrNW_004936727:1,570,650...1,576,796
Ensembl chrNW_004936727:1,570,678...1,577,026
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Xpa
XPA, DNA damage recognition and repair factor
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:17687452
NCBI chrNW_004936524:6,467,365...6,493,556
Ensembl chrNW_004936524:6,465,104...6,493,610
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Xrcc3
X-ray repair cross complementing 3
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:16501254
NCBI chrNW_004936621:1,462,441...1,474,937
Ensembl chrNW_004936621:1,462,428...1,473,868
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Xrcc5
X-ray repair cross complementing 5
ISO
protein:increased expression:epidermal cell, basal cell of epidermis (human)
RGD
PMID:16497868
RGD:8698657
NCBI chrNW_004936586:1,055,478...1,137,924
Ensembl chrNW_004936586:1,055,335...1,137,984
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Xrcc6
X-ray repair cross complementing 6
ISO
protein:increased expression:epidermal cell, basal cell of epidermis (human)
RGD
PMID:16497868
RGD:8698657
NCBI chrNW_004936492:303,843...325,812
Ensembl chrNW_004936492:300,057...325,845
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Ptch1
patched 1
ISO
DNA:missense mutations, nonsense mutations
RGD
PMID:25395299
RGD:150523793
NCBI chrNW_004936626:4,241,993...4,301,919
Ensembl chrNW_004936626:4,241,908...4,309,476
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Pik3ca
phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha
severity
ISO
DNA:mutations:multiple:
RGD
PMID:22522847
RGD:14402410
NCBI chrNW_004936566:3,924,013...3,951,052
Ensembl chrNW_004936566:3,923,934...3,951,073
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Kmt2d
lysine methyltransferase 2D
ISO
ClinVar Annotator: match by term: Eccrine porocarcinoma
ClinVar
PMID:28492532
NCBI chrNW_004936512:6,819,240...6,860,852
Ensembl chrNW_004936512:6,822,057...6,854,451
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Mre11
MRE11 homolog, double strand break repair nuclease
ISO
ClinVar Annotator: match by term: Eccrine porocarcinoma
ClinVar
NCBI chrNW_004936674:466,495...528,072
Ensembl chrNW_004936674:466,456...530,317
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Tbx3
T-box transcription factor 3
ISO
ClinVar Annotator: match by term: Eccrine porocarcinoma
ClinVar
NCBI chrNW_004936558:7,230,361...7,243,651
Ensembl chrNW_004936558:7,230,668...7,244,361
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Agap2
ArfGAP with GTPase domain, ankyrin repeat and PH domain 2
ISO
ClinVar Annotator: match by term: Familial melanoma
ClinVar
PMID:28492532
NCBI chrNW_004936646:1,865,154...1,881,614
Ensembl chrNW_004936646:1,865,395...1,876,453
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Arhgap9
Rho GTPase activating protein 9
ISO
ClinVar Annotator: match by term: Familial melanoma
ClinVar
PMID:28492532
NCBI chrNW_004936646:1,629,814...1,637,535
Ensembl chrNW_004936646:1,630,029...1,638,571
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Arhgef25
Rho guanine nucleotide exchange factor 25
ISO
ClinVar Annotator: match by term: Familial melanoma
ClinVar
PMID:28492532
NCBI chrNW_004936646:1,754,803...1,762,996
Ensembl chrNW_004936646:1,754,727...1,764,544
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B4galnt1
beta-1,4-N-acetyl-galactosaminyltransferase 1
ISO
ClinVar Annotator: match by term: Familial melanoma
ClinVar
PMID:28492532
NCBI chrNW_004936646:1,770,412...1,777,152
Ensembl chrNW_004936646:1,770,930...1,777,173
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Bap1
BRCA1 associated deubiquitinase 1
ISO
ClinVar Annotator: match by term: Familial melanoma
ClinVar
PMID:21874000 PMID:23684012 PMID:25741868 PMID:28492532
NCBI chrNW_004936473:3,239,009...3,247,806
Ensembl chrNW_004936473:3,239,010...3,247,806
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Braf
B-Raf proto-oncogene, serine/threonine kinase
ISO
ClinVar Annotator: match by term: Familial melanoma | ClinVar Annotator: match by term: Melanoma, cutaneous malignant, susceptibility to, 1 | ClinVar Annotator: match by term: Melanoma, cutaneous malignant, susceptibility to, 10
ClinVar OMIM
PMID:2500657 PMID:16439621 PMID:16474404 PMID:17366577 PMID:17551924 PMID:17703371 PMID:18039235 PMID:18042262 PMID:18413255 PMID:18456719 PMID:18854871 PMID:19206169 PMID:19376813 PMID:20186801 PMID:20395089 PMID:21784453 PMID:21871821 PMID:22301711 PMID:22495831 PMID:23312806 PMID:23564332 PMID:23975261 PMID:24033266 PMID:24088041 PMID:24409384 PMID:24524299 PMID:24719372 PMID:24775816 PMID:25035421 PMID:25741868 PMID:26242988 PMID:26472072 PMID:26633545 PMID:27146152 PMID:27322245 PMID:27478040 PMID:28404629 PMID:28492532 PMID:28687512 PMID:28783719 PMID:29540830 PMID:30986545 PMID:34411415 More...
NCBI chrNW_004936592:4,728,371...4,833,830
Ensembl chrNW_004936592:4,737,011...4,834,664
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Cdk4
cyclin dependent kinase 4
ISO
ClinVar Annotator: match by term: Cutaneous Malignant Melanoma, Dominant | ClinVar Annotator: match by term: Familial melanoma | ClinVar Annotator: match by term: MELANOMA AND RENAL CELL CARCINOMA, SUSCEPTIBILITY TO | ClinVar Annotator: match by term: Melanoma, cutaneous malignant, susceptibility to, 10 | ClinVar Annotator: match by term: Melanoma, cutaneous malignant, susceptibility to, 3 ClinVar Annotator: match by term: Cutaneous Malignant Melanoma, Dominant | ClinVar Annotator: match by term: Familial melanoma | ClinVar Annotator: match by term: Melanoma, cutaneous malignant, susceptibility to, 10 | ClinVar Annotator: match by term: Melanoma, cutaneous malignant, susceptibility to, 2 | ClinVar Annotator: match by term: Melanoma, cutaneous malignant, susceptibility to, 3 ClinVar Annotator: match by term: Cutaneous Malignant Melanoma, Dominant | ClinVar Annotator: match by term: Familial melanoma | ClinVar Annotator: match by term: Melanoma, cutaneous malignant, susceptibility to, 10 | ClinVar Annotator: match by term: Melanoma, cutaneous malignant, susceptibility to, 3 ClinVar Annotator: match by term: Cutaneous Malignant Melanoma, Dominant | ClinVar Annotator: match by term: Cutaneous malignant melanoma 5 | ClinVar Annotator: match by term: Familial melanoma | ClinVar Annotator: match by term: Melanoma, cutaneous malignant, susceptibility to, 3 | ClinVar Annotator: match by term: Melanoma, cutaneous malignant, susceptibility to, 5 ClinVar Annotator: match by term: Cutaneous Malignant Melanoma, Dominant | ClinVar Annotator: match by term: Familial melanoma | ClinVar Annotator: match by term: Melanoma, cutaneous malignant, susceptibility to, 10 | ClinVar Annotator: match by term: Melanoma, cutaneous malignant, susceptibility to, 2 | ClinVar Annotator: match by term: Melanoma, cutaneous malignant, susceptibility to, 3 | ClinVar Annotator: match by term: Melanoma, cutaneous malignant, susceptibility to, 5 ClinVar Annotator: match by term: Cutaneous Malignant Melanoma, Dominant | ClinVar Annotator: match by term: Familial melanoma | ClinVar Annotator: match by term: Hereditary cutaneous melanoma | ClinVar Annotator: match by term: Melanoma, cutaneous malignant, susceptibility to, 10 | ClinVar Annotator: match by term: Melanoma, cutaneous malignant, susceptibility to, 3 | ClinVar Annotator: match by term: Melanoma, cutaneous malignant, susceptibility to, 5 ClinVar Annotator: match by term: Cutaneous Malignant Melanoma, Dominant | ClinVar Annotator: match by term: Familial melanoma | ClinVar Annotator: match by term: Melanoma, cutaneous malignant, susceptibility to, 10 | ClinVar Annotator: match by term: Melanoma, cutaneous malignant, susceptibility to, 3 | ClinVar Annotator: match by term: Melanoma, cutaneous malignant, susceptibility to, 5 ClinVar Annotator: match by term: Cutaneous Malignant Melanoma, Dominant | ClinVar Annotator: match by term: Familial melanoma | ClinVar Annotator: match by term: MELANOMA AND RENAL CELL CARCINOMA, SUSCEPTIBILITY TO | ClinVar Annotator: match by term: Melanoma, cutaneous malignant, susceptibility to, 1 | ClinVar Annotator: match by term: Melanoma, cutaneous malignant, susceptibility to, 10 | ClinVar Annotator: match by term: Melanoma, cutaneous malignant, susceptibility to, 3 | ClinVar Annotator: match by term: Melanoma, cutaneous malignant, susceptibility to, 5
OMIM ClinVar
PMID:5377176 PMID:7652577 PMID:8528263 PMID:8968104 PMID:9228064 PMID:9311594 PMID:9425228 PMID:9536098 PMID:10398427 PMID:11756559 PMID:11828258 PMID:14621993 PMID:15880589 PMID:16201750 PMID:17576681 PMID:19139070 PMID:19690981 PMID:19888216 PMID:20668451 PMID:21520333 PMID:21801156 PMID:22804906 PMID:22932448 PMID:23384855 PMID:23546221 PMID:23718828 PMID:23737759 PMID:24162924 PMID:24256466 PMID:24321989 PMID:24728327 PMID:24755471 PMID:25157968 PMID:25186627 PMID:25305755 PMID:25318351 PMID:25344691 PMID:25416956 PMID:25741868 PMID:25980754 PMID:26252490 PMID:26467025 PMID:26534844 PMID:26580448 PMID:26619011 PMID:26800492 PMID:26976419 PMID:27640074 PMID:27978560 PMID:27997549 PMID:28060055 PMID:28135145 PMID:28166811 PMID:28380455 PMID:28492532 PMID:28640387 PMID:28726808 PMID:29625052 PMID:29641532 PMID:29774366 PMID:29917049 PMID:30093976 PMID:30374176 PMID:30426508 PMID:30851086 PMID:31118792 PMID:31159747 PMID:31570899 PMID:31784493 PMID:32645390 PMID:32980694 PMID:34130653 PMID:34285288 PMID:34326862 PMID:35264596 PMID:36095024 PMID:36243179 PMID:36816543 More...
NCBI chrNW_004936646:1,886,262...1,889,260
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Cdkn2b
cyclin dependent kinase inhibitor 2B
ISO
ClinVar Annotator: match by term: Familial melanoma
ClinVar
PMID:9622062 PMID:28492532
NCBI chrNW_004936652:3,576,975...3,582,790
Ensembl chrNW_004936652:3,538,986...3,581,159
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Dctn2
dynactin subunit 2
ISO
ClinVar Annotator: match by term: Familial melanoma
ClinVar
PMID:28492532
NCBI chrNW_004936646:1,678,678...1,695,142
Ensembl chrNW_004936646:1,678,678...1,695,142
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Ddit3
DNA damage inducible transcript 3
ISO
ClinVar Annotator: match by term: Familial melanoma
ClinVar
PMID:28492532
NCBI chrNW_004936646:1,665,019...1,669,212
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Dnah1
dynein axonemal heavy chain 1
ISO
ClinVar Annotator: match by term: Familial melanoma
ClinVar
PMID:21874000 PMID:23684012 PMID:25741868 PMID:28492532
NCBI chrNW_004936473:3,170,060...3,238,608
Ensembl chrNW_004936473:3,170,060...3,238,282
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Dtx3
deltex E3 ubiquitin ligase 3
ISO
ClinVar Annotator: match by term: Familial melanoma
ClinVar
PMID:28492532
NCBI chrNW_004936646:1,749,061...1,754,399
Ensembl chrNW_004936646:1,751,387...1,754,353
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Eef1akmt3
EEF1A lysine methyltransferase 3
ISO
ClinVar Annotator: match by term: Familial melanoma
ClinVar
PMID:28492532
NCBI chrNW_004936646:1,908,581...1,917,376
Ensembl chrNW_004936646:1,908,619...1,917,330
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Fanca
FA complementation group A
ISO
ClinVar Annotator: match by term: Melanoma, cutaneous malignant, susceptibility to, 5
ClinVar
PMID:28492532
NCBI chrNW_004936641:281,119...319,796
Ensembl chrNW_004936641:281,073...324,053
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Gli1
GLI family zinc finger 1
ISO
ClinVar Annotator: match by term: Familial melanoma
ClinVar
PMID:28492532
NCBI chrNW_004936646:1,622,308...1,629,787
Ensembl chrNW_004936646:1,622,308...1,629,779
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Inhbc
inhibin subunit beta C
ISO
ClinVar Annotator: match by term: Familial melanoma
ClinVar
PMID:28492532
NCBI chrNW_004936646:1,603,276...1,610,051
Ensembl chrNW_004936646:1,603,276...1,610,051
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Inhbe
inhibin subunit beta E
ISO
ClinVar Annotator: match by term: Familial melanoma
ClinVar
PMID:28492532
NCBI chrNW_004936646:1,614,902...1,616,482
Ensembl chrNW_004936646:1,614,745...1,616,279
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Kif5a
kinesin family member 5A
ISO
ClinVar Annotator: match by term: Familial melanoma
ClinVar
PMID:28492532
NCBI chrNW_004936646:1,697,531...1,730,376
Ensembl chrNW_004936646:1,697,492...1,732,832
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Klc1
kinesin light chain 1
ISO
ClinVar Annotator: match by term: Cutaneous malignant melanoma 6
ClinVar
PMID:11059748 PMID:28492532
NCBI chrNW_004936621:1,471,574...1,505,119
Ensembl chrNW_004936621:1,543,444...1,560,076 Ensembl chrNW_004936621:1,543,444...1,560,076
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LOC101978323
25-hydroxyvitamin D-1 alpha hydroxylase, mitochondrial
ISO
ClinVar Annotator: match by term: Familial melanoma
ClinVar
PMID:28492532
NCBI chrNW_004936646:1,899,686...1,904,104
Ensembl chrNW_004936646:1,900,259...1,904,104
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Lrp1
LDL receptor related protein 1
ISO
ClinVar Annotator: match by term: Familial melanoma
ClinVar
PMID:28492532
NCBI chrNW_004936646:1,326,900...1,407,236
Ensembl chrNW_004936646:1,327,374...1,406,456
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Marchf9
membrane associated ring-CH-type finger 9
ISO
ClinVar Annotator: match by term: Familial melanoma
ClinVar
PMID:28492532
NCBI chrNW_004936646:1,893,237...1,896,577
Ensembl chrNW_004936646:1,873,643...1,896,051
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Mars1
methionyl-tRNA synthetase 1
ISO
ClinVar Annotator: match by term: Familial melanoma
ClinVar
PMID:28492532
NCBI chrNW_004936646:1,644,457...1,665,081
Ensembl chrNW_004936646:1,644,457...1,665,086
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Mbd6
methyl-CpG binding domain protein 6
ISO
ClinVar Annotator: match by term: Familial melanoma
ClinVar
PMID:28492532
NCBI chrNW_004936646:1,669,281...1,678,512
G
Mc1r
melanocortin 1 receptor
ISO
ClinVar Annotator: match by term: Cutaneous malignant melanoma 5 | ClinVar Annotator: match by term: Familial melanoma | ClinVar Annotator: match by term: Melanoma, cutaneous malignant, susceptibility to, 10 | ClinVar Annotator: match by term: Melanoma, cutaneous malignant, susceptibility to, 3 | ClinVar Annotator: match by term: Melanoma, cutaneous malignant, susceptibility to, 5 | ClinVar Annotator: match by term: Melanoma, cutaneous malignant, susceptibility to, 8 ClinVar Annotator: match by term: Cutaneous malignant melanoma 5 | ClinVar Annotator: match by term: Familial melanoma | ClinVar Annotator: match by term: Melanoma, cutaneous malignant, susceptibility to, 10 | ClinVar Annotator: match by term: Melanoma, cutaneous malignant, susceptibility to, 5 ClinVar Annotator: match by term: Cutaneous malignant melanoma 5 | ClinVar Annotator: match by term: Familial melanoma | ClinVar Annotator: match by term: Melanoma, cutaneous malignant, susceptibility to, 10 | ClinVar Annotator: match by term: Melanoma, cutaneous malignant, susceptibility to, 2 | ClinVar Annotator: match by term: Melanoma, cutaneous malignant, susceptibility to, 3 | ClinVar Annotator: match by term: Melanoma, cutaneous malignant, susceptibility to, 5
OMIM ClinVar
PMID:7581459 PMID:8605020 PMID:8894704 PMID:8944016 PMID:8990005 PMID:9032047 PMID:9302268 PMID:9571181 PMID:9665397 PMID:10403794 PMID:10631149 PMID:10733465 PMID:10816645 PMID:11030758 PMID:11254446 PMID:11487574 PMID:11511307 PMID:11707265 PMID:11933208 PMID:12687585 PMID:12839583 PMID:12851329 PMID:12876664 PMID:14757863 PMID:14961558 PMID:14975928 PMID:15221796 PMID:15957185 PMID:15979202 PMID:15994880 PMID:15998953 PMID:16172233 PMID:16280005 PMID:16309897 PMID:16463023 PMID:16567973 PMID:16595073 PMID:16601669 PMID:16645598 PMID:16809487 PMID:16982779 PMID:16988943 PMID:17072629 PMID:17279550 PMID:17316231 PMID:17434924 PMID:17496785 PMID:17616515 PMID:17952075 PMID:18067130 PMID:18366057 PMID:18402696 PMID:18795926 PMID:18803811 PMID:18839200 PMID:18983535 PMID:19194882 PMID:19269164 PMID:19320745 PMID:19338054 PMID:19493000 PMID:19585506 PMID:19656326 PMID:19710684 PMID:19799798 PMID:19924138 PMID:20043015 PMID:20158590 PMID:20457063 PMID:20629734 PMID:20876876 PMID:21128237 PMID:21430882 PMID:21672182 PMID:21749400 PMID:22079958 PMID:22095472 PMID:22095742 PMID:22493355 PMID:22547573 PMID:22854540 PMID:22978401 PMID:23312576 PMID:23360207 PMID:23384855 PMID:23522749 PMID:23647022 PMID:23711066 PMID:24033266 PMID:24045876 PMID:24238329 PMID:24335900 PMID:24439955 PMID:24617981 PMID:24660985 PMID:24982914 PMID:25268584 PMID:25284244 PMID:25631192 PMID:25736238 PMID:25741868 PMID:25794181 PMID:26103569 PMID:26197705 PMID:26389780 PMID:26389967 PMID:26546047 PMID:26800492 PMID:27084066 PMID:27229376 PMID:27473757 PMID:28166811 PMID:28242083 PMID:28492532 PMID:28869973 PMID:29340229 PMID:31382929 More...
NCBI chrNW_004936641:193,885...198,730
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Mettl1
methyltransferase 1, tRNA methylguanosine
ISO
ClinVar Annotator: match by term: Familial melanoma
ClinVar
PMID:28492532
NCBI chrNW_004936646:1,905,063...1,908,968
Ensembl chrNW_004936646:1,904,599...1,908,545
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Mitf
melanocyte inducing transcription factor
ISO
ClinVar Annotator: match by term: MELANOMA AND RENAL CELL CARCINOMA, SUSCEPTIBILITY TO ClinVar Annotator: match by term: Familial melanoma | ClinVar Annotator: match by term: MELANOMA AND RENAL CELL CARCINOMA, SUSCEPTIBILITY TO | ClinVar Annotator: match by term: Melanoma, cutaneous malignant, susceptibility to, 8 ClinVar Annotator: match by term: MELANOMA AND RENAL CELL CARCINOMA, SUSCEPTIBILITY TO | ClinVar Annotator: match by term: Melanoma, cutaneous malignant, susceptibility to, 10 | ClinVar Annotator: match by term: Melanoma, cutaneous malignant, susceptibility to, 8
ClinVar OMIM
PMID:2440678 PMID:8589691 PMID:8659547 PMID:9536098 PMID:10587587 PMID:17576681 PMID:20127975 PMID:20478267 PMID:22012259 PMID:22080950 PMID:22158021 PMID:22320238 PMID:23167872 PMID:23774529 PMID:23787126 PMID:23802662 PMID:24033266 PMID:24194866 PMID:24290354 PMID:24352080 PMID:24406078 PMID:24638154 PMID:24660985 PMID:24767713 PMID:25407435 PMID:25741868 PMID:25803691 PMID:25943250 PMID:25975176 PMID:26103950 PMID:26467025 PMID:26650189 PMID:26775776 PMID:26800492 PMID:26850479 PMID:26999813 PMID:27153395 PMID:27473757 PMID:27680874 PMID:27759048 PMID:27889061 PMID:28125078 PMID:28152038 PMID:28376192 PMID:28492532 PMID:28690485 PMID:28825054 PMID:29115496 PMID:29407415 PMID:29484430 PMID:29506128 PMID:29531335 PMID:29625052 PMID:29706638 PMID:30311386 PMID:30394532 PMID:30414346 PMID:31465090 PMID:32054529 PMID:32728090 PMID:33051548 PMID:33240314 PMID:34142234 PMID:34289891 PMID:34662886 PMID:34997062 PMID:36451132 More...
NCBI chrNW_004936603:1,682,411...1,858,295
Ensembl chrNW_004936603:1,682,513...1,858,173
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Ndufa4l2
NDUFA4 mitochondrial complex associated like 2
ISO
ClinVar Annotator: match by term: Familial melanoma
ClinVar
PMID:28492532
NCBI chrNW_004936646:1,428,025...1,430,215
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Nxph4
neurexophilin 4
ISO
ClinVar Annotator: match by term: Familial melanoma
ClinVar
PMID:28492532
NCBI chrNW_004936646:1,410,937...1,421,383
Ensembl chrNW_004936646:1,410,931...1,421,531
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Os9
OS9 endoplasmic reticulum lectin
ISO
ClinVar Annotator: match by term: Familial melanoma
ClinVar
PMID:28492532
NCBI chrNW_004936646:1,832,434...1,860,200
Ensembl chrNW_004936646:1,832,015...1,859,576
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Pip4k2c
phosphatidylinositol-5-phosphate 4-kinase type 2 gamma
ISO
ClinVar Annotator: match by term: Familial melanoma
ClinVar
PMID:28492532
NCBI chrNW_004936646:1,737,088...1,748,056
Ensembl chrNW_004936646:1,737,034...1,748,057
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Pot1
protection of telomeres 1
ISO
ClinVar Annotator: match by term: Familial melanoma | ClinVar Annotator: match by term: Melanoma, cutaneous malignant, susceptibility to, 10 | ClinVar Annotator: match by term: Melanoma, cutaneous malignant, susceptibility to, 2 | ClinVar Annotator: match by term: Melanoma, cutaneous malignant, susceptibility to, 5 | ClinVar Annotator: match by term: Melanoma, cutaneous malignant, susceptibility to, 6 ClinVar Annotator: match by term: Familial melanoma | ClinVar Annotator: match by term: Hereditary cutaneous melanoma | ClinVar Annotator: match by term: Melanoma, cutaneous malignant, susceptibility to, 1 | ClinVar Annotator: match by term: Melanoma, cutaneous malignant, susceptibility to, 10 | ClinVar Annotator: match by term: Melanoma, cutaneous malignant, susceptibility to, 5 ClinVar Annotator: match by term: Familial melanoma | ClinVar Annotator: match by term: Melanoma, cutaneous malignant, susceptibility to, 1 | ClinVar Annotator: match by term: Melanoma, cutaneous malignant, susceptibility to, 10 | ClinVar Annotator: match by term: Melanoma, cutaneous malignant, susceptibility to, 5 ClinVar Annotator: match by term: Cutaneous Malignant Melanoma, Dominant | ClinVar Annotator: match by term: Cutaneous malignant melanoma 5 | ClinVar Annotator: match by term: Familial melanoma | ClinVar Annotator: match by term: Melanoma, cutaneous malignant, susceptibility to, 10 | ClinVar Annotator: match by term: Melanoma, cutaneous malignant, susceptibility to, 3 | ClinVar Annotator: match by term: Melanoma, cutaneous malignant, susceptibility to, 5 ClinVar Annotator: match by term: Familial melanoma | ClinVar Annotator: match by term: Melanoma, cutaneous malignant, susceptibility to, 1 | ClinVar Annotator: match by term: Melanoma, cutaneous malignant, susceptibility to, 10 | ClinVar Annotator: match by term: Melanoma, cutaneous malignant, susceptibility to, 3 | ClinVar Annotator: match by term: Melanoma, cutaneous malignant, susceptibility to, 5 ClinVar Annotator: match by term: Familial melanoma | ClinVar Annotator: match by term: Melanoma, cutaneous malignant, susceptibility to, 10 | ClinVar Annotator: match by term: Melanoma, cutaneous malignant, susceptibility to, 2 | ClinVar Annotator: match by term: Melanoma, cutaneous malignant, susceptibility to, 3 | ClinVar Annotator: match by term: Melanoma, cutaneous malignant, susceptibility to, 5 | ClinVar Annotator: match by term: Melanoma, cutaneous malignant, susceptibility to, 8 ClinVar Annotator: match by term: Cutaneous malignant melanoma 9 | ClinVar Annotator: match by term: Familial melanoma | ClinVar Annotator: match by term: Melanoma, cutaneous malignant, susceptibility to, 1 | ClinVar Annotator: match by term: Melanoma, cutaneous malignant, susceptibility to, 10 | ClinVar Annotator: match by term: Melanoma, cutaneous malignant, susceptibility to, 3 | ClinVar Annotator: match by term: Melanoma, cutaneous malignant, susceptibility to, 5 ClinVar Annotator: match by term: Familial melanoma | ClinVar Annotator: match by term: Melanoma, cutaneous malignant, susceptibility to, 10 | ClinVar Annotator: match by term: Melanoma, cutaneous malignant, susceptibility to, 5 ClinVar Annotator: match by term: Cutaneous malignant melanoma 5 | ClinVar Annotator: match by term: Familial melanoma | ClinVar Annotator: match by term: Melanoma, cutaneous malignant, susceptibility to, 10 | ClinVar Annotator: match by term: Melanoma, cutaneous malignant, susceptibility to, 5 ClinVar Annotator: match by term: Familial melanoma | ClinVar Annotator: match by term: Hereditary cutaneous melanoma | ClinVar Annotator: match by term: Melanoma, cutaneous malignant, susceptibility to, 1 | ClinVar Annotator: match by term: Melanoma, cutaneous malignant, susceptibility to, 10 | ClinVar Annotator: match by term: Melanoma, cutaneous malignant, susceptibility to, 3 | ClinVar Annotator: match by term: Melanoma, cutaneous malignant, susceptibility to, 5 | ClinVar Annotator: match by term: Melanoma, cutaneous malignant, susceptibility to, 8 | ClinVar Annotator: match by term: Melanoma, cutaneous malignant, susceptibility to, 9 ClinVar Annotator: match by term: Cutaneous malignant melanoma 9 | ClinVar Annotator: match by term: Familial melanoma | ClinVar Annotator: match by term: MELANOMA AND RENAL CELL CARCINOMA, SUSCEPTIBILITY TO | ClinVar Annotator: match by term: Melanoma, cutaneous malignant, susceptibility to, 1 | ClinVar Annotator: match by term: Melanoma, cutaneous malignant, susceptibility to, 10 | ClinVar Annotator: match by term: Melanoma, cutaneous malignant, susceptibility to, 2 | ClinVar Annotator: match by term: Melanoma, cutaneous malignant, susceptibility to, 3 | ClinVar Annotator: match by term: Melanoma, cutaneous malignant, susceptibility to, 5 | ClinVar Annotator: match by term: Melanoma, cutaneous malignant, susceptibility to, 8 ClinVar Annotator: match by term: Cutaneous malignant melanoma 5 | ClinVar Annotator: match by term: Familial melanoma | ClinVar Annotator: match by term: Melanoma, cutaneous malignant, susceptibility to, 1 | ClinVar Annotator: match by term: Melanoma, cutaneous malignant, susceptibility to, 10 | ClinVar Annotator: match by term: Melanoma, cutaneous malignant, susceptibility to, 2 | ClinVar Annotator: match by term: Melanoma, cutaneous malignant, susceptibility to, 5 | ClinVar Annotator: match by term: Melanoma, cutaneous malignant, susceptibility to, 8
ClinVar OMIM
PMID:9536098 PMID:16199547 PMID:17576681 PMID:19461895 PMID:19763152 PMID:20307669 PMID:22406018 PMID:23502782 PMID:24686846 PMID:24686849 PMID:25244922 PMID:25482530 PMID:25640679 PMID:25741868 PMID:25877891 PMID:25934589 PMID:26365187 PMID:26403419 PMID:26467025 PMID:27013236 PMID:27239034 PMID:27329137 PMID:27365461 PMID:27528712 PMID:27869160 PMID:28166811 PMID:28389767 PMID:28393830 PMID:28393832 PMID:28492532 PMID:28592523 PMID:28853721 PMID:29036293 PMID:29522175 PMID:29523635 PMID:29625052 PMID:29641532 PMID:29693246 PMID:30414346 PMID:30451293 PMID:30523342 PMID:30556179 PMID:30586141 PMID:30975761 PMID:31919090 PMID:31937561 PMID:32033110 PMID:32155570 PMID:32191290 PMID:32325837 PMID:32449991 PMID:32720348 PMID:32907878 PMID:32987645 PMID:33050356 PMID:33054084 PMID:33119245 PMID:33122293 PMID:33216348 PMID:33525650 PMID:33782098 PMID:33941849 PMID:34193977 PMID:34769003 PMID:35456397 PMID:35727838 PMID:36113475 PMID:36539277 PMID:36876055 PMID:37140166 PMID:38688277 More...
NCBI chrNW_004936605:836,824...919,099
Ensembl chrNW_004936605:836,769...920,201
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Pten
phosphatase and tensin homolog
ISO
ClinVar Annotator: match by term: MELANOMA, CUTANEOUS MALIGNANT, SUSCEPTIBILITY TO, 1
ClinVar
PMID:24033266 PMID:24055113 PMID:25741868 PMID:25980754 PMID:28492532 PMID:29706350 PMID:29785012 PMID:30311380 PMID:32350270 PMID:32832836 PMID:32885271 PMID:34793697 PMID:38645101 More...
NCBI chrNW_004936735:1,252,414...1,338,318
Ensembl chrNW_004936735:1,252,414...1,338,323
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R3hdm2
R3H domain containing 2
ISO
ClinVar Annotator: match by term: Familial melanoma
ClinVar
PMID:28492532
NCBI chrNW_004936646:1,447,704...1,571,363
Ensembl chrNW_004936646:1,448,362...1,494,637
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Shmt2
serine hydroxymethyltransferase 2
ISO
ClinVar Annotator: match by term: Melanoma, cutaneous malignant, susceptibility to, 3
ClinVar
PMID:28492532
NCBI chrNW_004936646:1,422,844...1,427,929
Ensembl chrNW_004936646:1,422,817...1,429,037
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Spire2
spire type actin nucleation factor 2
ISO
ClinVar Annotator: match by term: Melanoma, cutaneous malignant, susceptibility to, 5
ClinVar
PMID:28492532
NCBI chrNW_004936641:236,135...246,004
Ensembl chrNW_004936641:236,135...245,916
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Stac3
SH3 and cysteine rich domain 3
ISO
ClinVar Annotator: match by term: Familial melanoma
ClinVar
PMID:28492532
NCBI chrNW_004936646:1,436,505...1,444,712
Ensembl chrNW_004936646:1,436,425...1,443,595
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Stk11
serine/threonine kinase 11
ISO
ClinVar Annotator: match by term: Familial melanoma | ClinVar Annotator: match by term: Melanoma, cutaneous malignant, susceptibility to, 1 | ClinVar Annotator: match by term: Melanoma, cutaneous malignant, susceptibility to, 10 ClinVar Annotator: match by term: Familial melanoma | ClinVar Annotator: match by term: Melanoma, cutaneous malignant, susceptibility to, 1 | ClinVar Annotator: match by term: Melanoma, cutaneous malignant, susceptibility to, 3 ClinVar Annotator: match by term: Familial melanoma | ClinVar Annotator: match by term: Melanoma, cutaneous malignant, susceptibility to, 1 | ClinVar Annotator: match by term: Melanoma, cutaneous malignant, susceptibility to, 10 | ClinVar Annotator: match by term: Melanoma, cutaneous malignant, susceptibility to, 3
ClinVar OMIM
PMID:9536098 PMID:9887330 PMID:10201537 PMID:10208439 PMID:10676634 PMID:10780518 PMID:11668633 PMID:15188174 PMID:15800014 PMID:16287113 PMID:16407837 PMID:17576681 PMID:19892943 PMID:23399955 PMID:25157968 PMID:25452441 PMID:25503501 PMID:25741868 PMID:25778705 PMID:25980754 PMID:26467025 PMID:26580448 PMID:26928227 PMID:26979979 PMID:27467201 PMID:27978560 PMID:28135145 PMID:28492532 PMID:28944238 PMID:29045518 PMID:29368341 PMID:30093976 PMID:30287823 PMID:30885352 PMID:31159747 PMID:31742824 PMID:32647375 PMID:32658311 PMID:33020649 PMID:33471991 PMID:34326862 PMID:34849607 PMID:35264596 More...
NCBI chrNW_004936588:579,816...601,033
Ensembl chrNW_004936588:579,816...603,654
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Tcf25
transcription factor 25
ISO
ClinVar Annotator: match by term: Melanoma, cutaneous malignant, susceptibility to, 5
ClinVar
PMID:28492532
NCBI chrNW_004936641:202,522...232,962
Ensembl chrNW_004936641:202,624...232,962
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Tert
telomerase reverse transcriptase
ISO
ClinVar Annotator: match by term: Cutaneous malignant melanoma 9 | ClinVar Annotator: match by term: MELANOMA, CUTANEOUS MALIGNANT, SUSCEPTIBILITY TO, 9 | ClinVar Annotator: match by term: Melanoma, cutaneous malignant, susceptibility to, 1 | ClinVar Annotator: match by term: Melanoma, cutaneous malignant, susceptibility to, 9 ClinVar Annotator: match by term: Familial melanoma | ClinVar Annotator: match by term: MELANOMA, CUTANEOUS MALIGNANT, SUSCEPTIBILITY TO, 9 | ClinVar Annotator: match by term: Melanoma, cutaneous malignant, susceptibility to, 1 | ClinVar Annotator: match by term: Melanoma, cutaneous malignant, susceptibility to, 9 ClinVar Annotator: match by term: Cutaneous malignant melanoma 9 | ClinVar Annotator: match by term: Familial melanoma | ClinVar Annotator: match by term: MELANOMA, CUTANEOUS MALIGNANT, SUSCEPTIBILITY TO, 9 | ClinVar Annotator: match by term: Melanoma, cutaneous malignant, susceptibility to, 1 | ClinVar Annotator: match by term: Melanoma, cutaneous malignant, susceptibility to, 9
OMIM ClinVar
PMID:15814878 PMID:19561322 PMID:20301779 PMID:20871597 PMID:21436073 PMID:22037553 PMID:23066086 PMID:23348503 PMID:23535731 PMID:23901009 PMID:24833766 PMID:25741868 PMID:26136524 PMID:26194807 PMID:26365799 PMID:26433962 PMID:28154186 PMID:28492532 PMID:28813500 PMID:28818973 PMID:29036293 PMID:29483670 PMID:31395865 PMID:35776903 More...
NCBI chrNW_004936815:468,987...492,666
Ensembl chrNW_004936815:469,020...491,697
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Tp53
tumor protein p53
ISO
ClinVar Annotator: match by term: Melanoma, cutaneous malignant, susceptibility to, 5 ClinVar Annotator: match by term: Familial melanoma
ClinVar
PMID:12826609 PMID:25741868 PMID:28492532 PMID:29979965 PMID:30224644
NCBI chrNW_004936595:919,807...935,367
Ensembl chrNW_004936595:919,428...925,425
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Tsfm
Ts translation elongation factor, mitochondrial
ISO
ClinVar Annotator: match by term: Familial melanoma
ClinVar
PMID:28492532
NCBI chrNW_004936646:1,919,326...1,936,694
Ensembl chrNW_004936646:1,908,304...1,930,287
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Tspan31
tetraspanin 31
ISO
ClinVar Annotator: match by term: Cutaneous Malignant Melanoma, Dominant | ClinVar Annotator: match by term: Familial melanoma | ClinVar Annotator: match by term: Melanoma, cutaneous malignant, susceptibility to, 3 ClinVar Annotator: match by term: Cutaneous Malignant Melanoma, Dominant | ClinVar Annotator: match by term: Familial melanoma | ClinVar Annotator: match by term: Melanoma, cutaneous malignant, susceptibility to, 10 | ClinVar Annotator: match by term: Melanoma, cutaneous malignant, susceptibility to, 3 | ClinVar Annotator: match by term: Melanoma, cutaneous malignant, susceptibility to, 5 ClinVar Annotator: match by term: Cutaneous Malignant Melanoma, Dominant | ClinVar Annotator: match by term: Familial melanoma | ClinVar Annotator: match by term: Melanoma, cutaneous malignant, susceptibility to, 3 | ClinVar Annotator: match by term: Melanoma, cutaneous malignant, susceptibility to, 5
ClinVar
PMID:9536098 PMID:17576681 PMID:20668451 PMID:21520333 PMID:23718828 PMID:24728327 PMID:24755471 PMID:25186627 PMID:25305755 PMID:25318351 PMID:25344691 PMID:25741868 PMID:25980754 PMID:26252490 PMID:26467025 PMID:26580448 PMID:27640074 PMID:27997549 PMID:28166811 PMID:28492532 PMID:29641532 PMID:29917049 PMID:30093976 PMID:30851086 PMID:31159747 PMID:31784493 PMID:32980694 PMID:34285288 PMID:34326862 PMID:35264596 PMID:36095024 PMID:36243179 More...
NCBI chrNW_004936646:1,883,272...1,886,287
Ensembl chrNW_004936646:1,883,341...1,889,284
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Tyr
tyrosinase
ISO
ClinVar Annotator: match by term: MELANOMA AND RENAL CELL CARCINOMA, SUSCEPTIBILITY TO ClinVar Annotator: match by term: Melanoma, cutaneous malignant, susceptibility to, 10
ClinVar
PMID:666627 PMID:1429711 PMID:1820207 PMID:7704033 PMID:9158138 PMID:10766867 PMID:17952075 PMID:18326704 PMID:18488027 PMID:18488028 PMID:18925668 PMID:19208379 PMID:19533789 PMID:20301345 PMID:21541274 PMID:23504663 PMID:25216246 PMID:25741868 PMID:28492532 PMID:30472657 PMID:35803923 More...
NCBI chrNW_004936736:421,623...519,085
Ensembl chrNW_004936736:421,598...519,253
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Xrcc3
X-ray repair cross complementing 3
ISO
ClinVar Annotator: match by term: Cutaneous malignant melanoma 6
OMIM ClinVar
PMID:11059748 PMID:28492532
NCBI chrNW_004936621:1,462,441...1,474,937
Ensembl chrNW_004936621:1,462,428...1,473,868
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Tgfbr1
transforming growth factor beta receptor 1
ISO
ClinVar Annotator: match by term: Ferguson-Smith type epithelioma | ClinVar Annotator: match by term: Multiple self-healing squamous epithelioma
OMIM ClinVar
PMID:2511639 PMID:2647812 PMID:5173258 PMID:8499949 PMID:16596670 PMID:16791849 PMID:16928994 PMID:18781618 PMID:19542084 PMID:21267002 PMID:21358634 PMID:22414221 PMID:23358096 PMID:23884466 PMID:24033266 PMID:24055113 PMID:24793577 PMID:25110237 PMID:25116393 PMID:25504618 PMID:25521989 PMID:25637381 PMID:25715477 PMID:25741868 PMID:25834947 PMID:25907466 PMID:25944730 PMID:25985138 PMID:26848186 PMID:26877057 PMID:27146836 PMID:27153395 PMID:27611364 PMID:27647783 PMID:27879313 PMID:28209770 PMID:28492532 PMID:28550590 PMID:28655553 PMID:28659821 PMID:29706644 PMID:29907982 PMID:31915033 PMID:33256177 PMID:33824467 PMID:36937954 More...
NCBI chrNW_004936524:7,656,523...7,680,043
Ensembl chrNW_004936524:7,655,847...7,681,097
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LOC101965998
notch receptor 2
ISO
ClinVar Annotator: match by term: Keratoacanthoma
ClinVar
PMID:27283355
NCBI chrNW_004936872:454,273...539,544
Ensembl chrNW_004936872:390,852...536,321
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Notch1
notch receptor 1
ISO
ClinVar Annotator: match by term: Keratoacanthoma
ClinVar
PMID:27283355
NCBI chrNW_004936669:1,292,016...1,334,061
Ensembl chrNW_004936669:1,292,088...1,332,428
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Pik3ca
phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha
ISO
ClinVar Annotator: match by term: Keratoacanthoma
ClinVar
PMID:22949682 PMID:23246288 PMID:25741868 PMID:27283355 PMID:28151489 PMID:28492532 More...
NCBI chrNW_004936566:3,924,013...3,951,052
Ensembl chrNW_004936566:3,923,934...3,951,073
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Cd68
CD68 molecule
ISO
protein:increased expression:tumor (human)
RGD
PMID:22050913
RGD:40925916
NCBI chrNW_004936595:858,289...861,131
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Fgfr3
fibroblast growth factor receptor 3
ISO
mRNA:decreased expression:skin (human)
RGD
PMID:28359267
RGD:38500206
NCBI chrNW_004936477:21,591,772...21,606,289
Ensembl chrNW_004936477:21,591,792...21,606,296
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Myc
MYC proto-oncogene, bHLH transcription factor
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:25277525
NCBI chrNW_004936470:20,480,844...20,485,955
Ensembl chrNW_004936470:20,480,829...20,485,965
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Spa17
sperm autoantigenic protein 17
ISO
mRNA,protein:increased expression:nucleus
RGD
PMID:31218705
RGD:27226803
Ensembl chrNW_004936743:1,141,879...1,163,720
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Ccnh
cyclin H
ISO
ClinVar Annotator: match by term: Basal cell carcinoma, multiple
ClinVar
PMID:24038909 PMID:25741868 PMID:28492532
NCBI chrNW_004936469:5,933,163...5,952,190
Ensembl chrNW_004936469:5,935,131...5,952,460
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Ptch1
patched 1
ISO
ClinVar Annotator: match by term: Basal cell carcinoma, multiple
ClinVar
PMID:22703879 PMID:24728327 PMID:25637381 PMID:25741868 PMID:26467025 PMID:28492532 PMID:28495808 PMID:30093976 More...
NCBI chrNW_004936626:4,241,993...4,301,919
Ensembl chrNW_004936626:4,241,908...4,309,476
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Ptch2
patched 2
ISO
ClinVar Annotator: match by term: Basal cell carcinoma, multiple
ClinVar
PMID:25741868 PMID:28492532 PMID:31945512
NCBI chrNW_004936474:26,052,277...26,069,500
Ensembl chrNW_004936474:26,052,305...26,069,312
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Rasa1
RAS p21 protein activator 1
ISO
ClinVar Annotator: match by term: Basal cell carcinoma, multiple
ClinVar
PMID:22200646 PMID:23801933 PMID:24038909 PMID:25741868 PMID:28492532
NCBI chrNW_004936469:5,839,560...5,933,049
Ensembl chrNW_004936469:5,839,743...5,932,021
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Smo
smoothened, frizzled class receptor
ISO
ClinVar Annotator: match by term: Basal cell carcinoma, multiple
ClinVar
PMID:25741868 PMID:28492532
NCBI chrNW_004936579:5,893,064...5,917,021
Ensembl chrNW_004936579:5,892,542...5,917,281
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Nlrp1
NLR family pyrin domain containing 1
ISO
ClinVar Annotator: match by term: Palmoplantar carcinoma, multiple self-healing
ClinVar OMIM
PMID:16199547 PMID:17377159 PMID:23349227 PMID:24033266 PMID:25050600 PMID:25741868 PMID:27662089 PMID:28492532 More...
NCBI chrNW_004936677:2,248,153...2,290,802
Ensembl chrNW_004936677:2,248,903...2,289,151
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Aopep
aminopeptidase O (putative)
ISO
ClinVar Annotator: match by term: Gorlin syndrome
ClinVar
PMID:17703323 PMID:17924555 PMID:22382802 PMID:28492532
NCBI chrNW_004936626:3,704,474...3,973,913
Ensembl chrNW_004936626:3,667,123...3,970,433
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Arl3
ARF like GTPase 3
ISO
ClinVar Annotator: match by term: Gorlin syndrome
ClinVar
PMID:12068298 PMID:22508808 PMID:25403219 PMID:28492532 PMID:31639285
NCBI chrNW_004936600:3,190,212...3,229,831
Ensembl chrNW_004936600:3,190,208...3,232,755
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Fancc
FA complementation group C
ISO
ClinVar Annotator: match by term: Gorlin syndrome
ClinVar
PMID:16301862 PMID:16419085 PMID:17703323 PMID:17924555 PMID:22382802 PMID:28492532 More...
NCBI chrNW_004936626:3,980,311...4,147,042
Ensembl chrNW_004936626:3,982,647...4,159,976
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Gli1
GLI family zinc finger 1
ISO
RGD
PMID:15308259
RGD:12801443
NCBI chrNW_004936646:1,622,308...1,629,787
Ensembl chrNW_004936646:1,622,308...1,629,779
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Gli2
GLI family zinc finger 2
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:16936257
NCBI chrNW_004936469:49,616,552...49,788,760
Ensembl chrNW_004936469:49,617,095...49,673,213
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LOC101970767
steroid 17-alpha-hydroxylase/17,20 lyase
ISO
ClinVar Annotator: match by term: Gorlin syndrome
ClinVar
PMID:12068298 PMID:22508808 PMID:25403219 PMID:28492532 PMID:31639285
NCBI chrNW_004936600:3,097,620...3,102,713
Ensembl chrNW_004936600:3,097,638...3,102,713
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Ptch1
patched 1
ISO
ClinVar Annotator: match by term: Basal cell nevus syndrome | ClinVar Annotator: match by term: Fifth Phacomatosis | ClinVar Annotator: match by term: Gorlin syndrome | ClinVar Annotator: match by term: Gorlin-Goltz Syndrome ClinVar Annotator: match by term: Basal cell nevus syndrome | ClinVar Annotator: match by term: Gorlin syndrome | ClinVar Annotator: match by term: MULTIPLE BASAL CELL NEVI, ODONTOGENIC KERATOCYSTS, AND SKELETAL ANOMALIES
ClinVar
PMID:1347096 PMID:1850296 PMID:8302318 PMID:8658145 PMID:8681379 PMID:8840969 PMID:8981943 PMID:9096761 PMID:9231911 PMID:9341860 PMID:9415689 PMID:9463336 PMID:9536098 PMID:9620294 PMID:10048928 PMID:10200051 PMID:10564585 PMID:10890722 PMID:11231326 PMID:11387302 PMID:11457640 PMID:11941477 PMID:12192414 PMID:12204003 PMID:12655573 PMID:12879481 PMID:12900905 PMID:12925203 PMID:15042702 PMID:15290653 PMID:15459969 PMID:15545745 PMID:15565302 PMID:15712338 PMID:16088933 PMID:16199547 PMID:16203740 PMID:16231297 PMID:16301862 PMID:16419085 PMID:16508594 PMID:16906569 PMID:16909134 PMID:16929110 PMID:16931872 PMID:17001668 PMID:17021131 PMID:17096318 PMID:17328283 PMID:17349603 PMID:17576681 PMID:17703323 PMID:17924555 PMID:18302678 PMID:18373848 PMID:18477452 PMID:18502968 PMID:18510667 PMID:18830227 PMID:19002359 PMID:19346217 PMID:19362041 PMID:19521425 PMID:19557015 PMID:19618880 PMID:20068110 PMID:20301330 PMID:20485063 PMID:20690502 PMID:21188540 PMID:21368767 PMID:21490102 PMID:21514272 PMID:21520333 PMID:21567912 PMID:22193408 PMID:22221699 PMID:22313357 PMID:22382802 PMID:22434048 PMID:22572734 PMID:22675565 PMID:22703879 PMID:22820256 PMID:22829011 PMID:22844361 PMID:22952776 PMID:22995991 PMID:23061468 PMID:23313819 PMID:23334667 PMID:23761049 PMID:23951062 PMID:24033266 PMID:24055113 PMID:24204797 PMID:24335643 PMID:24368541 PMID:24369017 PMID:24529220 PMID:24651015 PMID:24668667 PMID:24728327 PMID:24807215 PMID:24814739 PMID:24816767 PMID:24942795 PMID:25117323 PMID:25131638 PMID:25260786 PMID:25326635 PMID:25403219 PMID:25525159 PMID:25567908 PMID:25637381 PMID:25640679 PMID:25727044 PMID:25741868 PMID:25938944 PMID:26356331 PMID:26467025 PMID:26489027 PMID:26544948 PMID:26559152 PMID:26580448 PMID:26604511 PMID:26802149 PMID:26893459 PMID:26997948 PMID:27028851 PMID:27153395 PMID:27535533 PMID:27561271 PMID:27793025 PMID:27930734 PMID:27993330 PMID:28252636 PMID:28342698 PMID:28492532 PMID:28495808 PMID:28596197 PMID:28627087 PMID:28690523 PMID:28733979 PMID:28873162 PMID:29146900 PMID:29205322 PMID:29212164 PMID:29230040 PMID:29277811 PMID:29381605 PMID:29446198 PMID:29498494 PMID:29575684 PMID:29641532 PMID:29654263 PMID:29753700 PMID:29983323 PMID:29992659 PMID:30032850 PMID:30093976 PMID:30102335 PMID:30166346 PMID:30256826 PMID:30262796 PMID:30368514 PMID:30411536 PMID:30584090 PMID:30666157 PMID:30754660 PMID:30762128 PMID:30936464 PMID:30997576 PMID:31127104 PMID:31180159 PMID:31437519 PMID:31548691 PMID:31613886 PMID:31639285 PMID:31644632 PMID:31645765 PMID:31655866 PMID:31837199 PMID:31911633 PMID:32074614 PMID:32238911 PMID:32251017 PMID:32311334 PMID:32321774 PMID:32409749 PMID:32741058 PMID:32906206 PMID:33077954 PMID:33179747 PMID:33209614 PMID:33270637 PMID:33332384 PMID:33418956 PMID:33441926 PMID:33466296 PMID:33609447 PMID:33674644 PMID:33729574 PMID:33807452 PMID:34008892 PMID:34194672 PMID:34426522 PMID:34831015 PMID:35170016 PMID:35181726 PMID:35437209 PMID:36693175 More...
NCBI chrNW_004936626:4,241,993...4,301,919
Ensembl chrNW_004936626:4,241,908...4,309,476
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Ptch2
patched 2
ISO
ClinVar Annotator: match by term: Basal cell nevus syndrome | ClinVar Annotator: match by term: Gorlin syndrome
ClinVar
PMID:9536098 PMID:16199547 PMID:17576681 PMID:18285427 PMID:23951062 PMID:25260786 PMID:25741868 PMID:28492532 PMID:28915250 PMID:31945512 PMID:32864857 PMID:33077954 More...
NCBI chrNW_004936474:26,052,277...26,069,500
Ensembl chrNW_004936474:26,052,305...26,069,312
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Pth
parathyroid hormone
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:24803734
NCBI chrNW_004936528:5,081,569...5,084,030
Ensembl chrNW_004936528:5,083,596...5,084,030
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Sfxn2
sideroflexin 2
ISO
ClinVar Annotator: match by term: Gorlin syndrome
ClinVar
PMID:12068298 PMID:22508808 PMID:25403219 PMID:28492532 PMID:31639285
NCBI chrNW_004936600:3,173,472...3,190,041
Ensembl chrNW_004936600:3,173,336...3,188,649
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Shh
sonic hedgehog signaling molecule
ISO
MouseDO RGD
PMID:9115210
RGD:12802345
NCBI chrNW_004936527:10,033,095...10,042,713
Ensembl chrNW_004936527:10,033,299...10,042,599
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Smo
smoothened, frizzled class receptor
ISO
RGD
PMID:15308259
RGD:12801443
NCBI chrNW_004936579:5,893,064...5,917,021
Ensembl chrNW_004936579:5,892,542...5,917,281
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Sufu
SUFU negative regulator of hedgehog signaling
ISO
ClinVar Annotator: match by term: Fifth Phacomatosis | ClinVar Annotator: match by term: Gorlin syndrome ClinVar Annotator: match by term: Basal cell nevus syndrome | ClinVar Annotator: match by term: Gorlin syndrome
ClinVar
PMID:9536098 PMID:12068298 PMID:16199547 PMID:17102621 PMID:17576681 PMID:19533801 PMID:19833601 PMID:21188540 PMID:22508808 PMID:23265383 PMID:23826113 PMID:24651015 PMID:24728327 PMID:25287320 PMID:25403219 PMID:25640679 PMID:25741868 PMID:26467025 PMID:26580448 PMID:26677030 PMID:27363716 PMID:27793025 PMID:27930734 PMID:28050010 PMID:28492532 PMID:28717660 PMID:28873162 PMID:28965847 PMID:29186568 PMID:29356994 PMID:29489754 PMID:29641532 PMID:29654263 PMID:29753700 PMID:30256826 PMID:31639285 PMID:31781912 PMID:32278351 PMID:32295625 PMID:33024317 PMID:34056767 PMID:34589056 PMID:34675124 PMID:35768194 PMID:36825822 More...
NCBI chrNW_004936600:3,270,662...3,381,722
Ensembl chrNW_004936600:3,268,260...3,381,781
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Trim8
tripartite motif containing 8
ISO
ClinVar Annotator: match by term: Gorlin syndrome
ClinVar
PMID:12068298 PMID:22508808 PMID:25403219 PMID:28492532 PMID:31639285
NCBI chrNW_004936600:3,244,888...3,259,042
Ensembl chrNW_004936600:3,244,405...3,259,218
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Wbp1l
WW domain binding protein 1 like
ISO
ClinVar Annotator: match by term: Gorlin syndrome
ClinVar
PMID:12068298 PMID:22508808 PMID:25403219 PMID:28492532 PMID:31639285
NCBI chrNW_004936600:3,111,377...3,125,244
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Ptch1
patched 1
ISO
ClinVar Annotator: match by term: Basal cell nevus syndrome 1
ClinVar OMIM
PMID:8658145 PMID:8681379 PMID:12900905 PMID:16199547 PMID:16301862 PMID:16419085 PMID:18477452 PMID:18502968 PMID:18830227 PMID:19213655 PMID:20301330 PMID:22572734 PMID:24204797 PMID:24814739 PMID:25741868 PMID:27153395 PMID:28492532 PMID:29575684 PMID:30411536 More...
NCBI chrNW_004936626:4,241,993...4,301,919
Ensembl chrNW_004936626:4,241,908...4,309,476
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Ptch2
patched 2
ISO
ClinVar Annotator: match by term: Basal cell nevus syndrome 1
ClinVar
PMID:25741868 PMID:28492532
NCBI chrNW_004936474:26,052,277...26,069,500
Ensembl chrNW_004936474:26,052,305...26,069,312
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Sufu
SUFU negative regulator of hedgehog signaling
ISO
ClinVar Annotator: match by term: Basal cell nevus syndrome 2 | ClinVar Annotator: match by term: NEVOID BASAL CELL CARCINOMA SYNDROME 2
OMIM ClinVar
PMID:12068298 PMID:19533801 PMID:19833601 PMID:21188540 PMID:22508808 PMID:25403219 PMID:25741868 PMID:28492532 PMID:29186568 PMID:29753700 PMID:33024317 PMID:34675124 PMID:35768194 PMID:36825822 More...
NCBI chrNW_004936600:3,270,662...3,381,722
Ensembl chrNW_004936600:3,268,260...3,381,781
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Aff4
ALF transcription elongation factor 4
disease_progression
ISO
RGD
PMID:33417923
RGD:155631266
NCBI chrNW_004936647:2,242,476...2,342,409
Ensembl chrNW_004936647:2,242,319...2,336,532
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Agt
angiotensinogen
ISO
protein:increased expression:serum
RGD
PMID:19394758
RGD:8548874
NCBI chrNW_004936484:19,713,299...19,721,144
Ensembl chrNW_004936484:19,716,165...19,721,261
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Arhgap44
Rho GTPase activating protein 44
severity
ISO
DNA:SNP:intron: (rs72635537) (human)
RGD
PMID:28510328
RGD:401901274
NCBI chrNW_004936595:5,373,645...5,542,915
Ensembl chrNW_004936595:5,373,476...5,543,073
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Bap1
BRCA1 associated deubiquitinase 1
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:25231345 PMID:26719535
NCBI chrNW_004936473:3,239,009...3,247,806
Ensembl chrNW_004936473:3,239,010...3,247,806
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Birc2
baculoviral IAP repeat containing 2
exacerbates
ISO
mRNA:increased expression:zone of skin (human)
RGD
PMID:31964418
RGD:153344516
NCBI chrNW_004936551:5,515,904...5,535,864
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Braf
B-Raf proto-oncogene, serine/threonine kinase
ISO
ClinVar Annotator: match by term: Cutaneous melanoma | ClinVar Annotator: match by term: DYSPLASTIC NEVUS SYNDROME, HEREDITARY | ClinVar Annotator: match by term: Malignant melanoma of skin
ClinVar
PMID:2493360 PMID:2500657 PMID:12068308 PMID:12198537 PMID:12447372 PMID:12460918 PMID:12460919 PMID:12619120 PMID:12644542 PMID:12670889 PMID:12794760 PMID:12960123 PMID:14513361 PMID:14602780 PMID:14612909 PMID:14679157 PMID:14688025 PMID:15001635 PMID:15035987 PMID:15126572 PMID:15181070 PMID:15342696 PMID:15356022 PMID:15386408 PMID:15687339 PMID:15998781 PMID:16015629 PMID:16174717 PMID:16187918 PMID:16439621 PMID:16474404 PMID:16772349 PMID:17096326 PMID:17119447 PMID:17311103 PMID:17366577 PMID:17374713 PMID:17488796 PMID:17551924 PMID:17603483 PMID:17703371 PMID:17785355 PMID:18039235 PMID:18042262 PMID:18186519 PMID:18368129 PMID:18398503 PMID:18413255 PMID:18456719 PMID:18794803 PMID:18854871 PMID:19001320 PMID:19010912 PMID:19018267 PMID:19206169 PMID:19238210 PMID:19376813 PMID:19383316 PMID:19404918 PMID:19537845 PMID:19561230 PMID:19571295 PMID:19913317 PMID:20008640 PMID:20186801 PMID:20350999 PMID:20395089 PMID:20413299 PMID:20619739 PMID:20630094 PMID:20818844 PMID:20823850 PMID:20857202 PMID:21062266 PMID:21107320 PMID:21107323 PMID:21129611 PMID:21156289 PMID:21163703 PMID:21426297 PMID:21483012 PMID:21502544 PMID:21639808 PMID:21641636 PMID:21683865 PMID:21784453 PMID:21871821 PMID:21975775 PMID:22038996 PMID:22039425 PMID:22048237 PMID:22113612 PMID:22180495 PMID:22281684 PMID:22301711 PMID:22310681 PMID:22351686 PMID:22356324 PMID:22389471 PMID:22448344 PMID:22495831 PMID:22536370 PMID:22586120 PMID:22608338 PMID:22649091 PMID:22663011 PMID:22735384 PMID:22743296 PMID:22773810 PMID:22798288 PMID:22805292 PMID:22972589 PMID:22997239 PMID:23020132 PMID:23031422 PMID:23251002 PMID:23273605 PMID:23302800 PMID:23312806 PMID:23325582 PMID:23352452 PMID:23470635 PMID:23524406 PMID:23549875 PMID:23564332 PMID:23614898 PMID:23685455 PMID:23715574 PMID:23812671 PMID:23833300 PMID:23845441 PMID:23918947 PMID:23975261 PMID:24033266 PMID:24088041 PMID:24107445 PMID:24112392 PMID:24163374 PMID:24303953 PMID:24388723 PMID:24409384 PMID:24446311 PMID:24451042 PMID:24508103 PMID:24512911 PMID:24524299 PMID:24576830 PMID:24583796 PMID:24586605 PMID:24594804 PMID:24670642 PMID:24717435 PMID:24719372 PMID:24775816 PMID:24920063 PMID:25024077 PMID:25035421 PMID:25037139 PMID:25079330 PMID:25157968 PMID:25265492 PMID:25265494 PMID:25370471 PMID:25399551 PMID:25463315 PMID:25741868 PMID:25950823 PMID:25989278 PMID:26242988 PMID:26472072 PMID:26619011 PMID:26633545 PMID:26678033 PMID:27146152 PMID:27236105 PMID:27276561 PMID:27322245 PMID:27404270 PMID:27478040 PMID:27480103 PMID:28404629 PMID:28492532 PMID:28687512 PMID:28783719 PMID:28832562 PMID:28854169 PMID:28891408 PMID:29540830 PMID:29595366 PMID:29907801 PMID:29925953 PMID:30986545 PMID:31277584 PMID:31336229 PMID:31779674 PMID:31891627 PMID:34411415 PMID:34476331 More...
NCBI chrNW_004936592:4,728,371...4,833,830
Ensembl chrNW_004936592:4,737,011...4,834,664
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Brca2
BRCA2 DNA repair associated
disease_progression
ISO
DNA:SNP: :rs206118, rs3752447, rs10492396 (human)
RGD
PMID:25243787
RGD:11344896
NCBI chrNW_004936472:26,945,659...27,017,693
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Cd40
CD40 molecule
disease_progression
ISO
RGD
PMID:8952530
RGD:8547772
NCBI chrNW_004936514:6,936,915...6,947,246
Ensembl chrNW_004936514:6,936,572...6,947,280
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Cdk4
cyclin dependent kinase 4
ISO
ClinVar Annotator: match by term: Cutaneous melanoma | ClinVar Annotator: match by term: Malignant melanoma of skin
ClinVar
PMID:5377176 PMID:7652577 PMID:8528263 PMID:8968104 PMID:9228064 PMID:9425228 PMID:11756559 PMID:15880589 PMID:21801156 PMID:22804906 PMID:23384855 PMID:23546221 PMID:24256466 PMID:25157968 PMID:25741868 PMID:26619011 PMID:28492532 PMID:29774366 More...
NCBI chrNW_004936646:1,886,262...1,889,260
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Chaf1b
chromatin assembly factor 1 subunit B
severity
ISO
protein:increased expression:skin:
RGD
PMID:20178651
RGD:9587476
NCBI chrNW_004936500:6,262,207...6,288,833
Ensembl chrNW_004936500:6,262,229...6,288,839
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Cnr1
cannabinoid receptor 1
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:28131817
NCBI chrNW_004936510:3,779,930...3,806,615
Ensembl chrNW_004936510:3,781,210...3,802,693
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Creb1
cAMP responsive element binding protein 1
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:29179997
NCBI chrNW_004936631:3,721,307...3,785,346
Ensembl chrNW_004936631:3,721,313...3,780,892
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Ctcf
CCCTC-binding factor
ISO
DNA:mutations:multiple (human)
RGD
PMID:27974201
RGD:151356739
NCBI chrNW_004936475:17,987,137...18,031,733
Ensembl chrNW_004936475:17,987,156...18,031,760
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Ctnnb1
catenin beta 1
ISO
ClinVar Annotator: match by term: Cutaneous melanoma
ClinVar
PMID:10192393 PMID:25741868 PMID:26619011
NCBI chrNW_004936473:29,999,542...30,034,610
Ensembl chrNW_004936473:29,999,562...30,038,293
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Ddr1
discoidin domain receptor tyrosine kinase 1
severity treatment
ISO
protein:increased expression:skin lesion (human) human cells in mouse model; DDR1-IN-1
RGD
PMID:31271515
RGD:151347864
NCBI chrNW_004936837:523,227...538,799
Ensembl chrNW_004936837:523,266...538,833
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Dnmt3b
DNA methyltransferase 3 beta
disease_progression
ISO
RGD
PMID:21081840
RGD:9589074
NCBI chrNW_004936485:19,547,836...19,570,716
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Eml1
EMAP like 1
disease_progression
ISO
DNA:SNP: :rs10151787 (A>G)
RGD
PMID:34249459
RGD:597538489
NCBI chrNW_004936604:3,498,413...3,662,188
Ensembl chrNW_004936604:3,498,304...3,662,244
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Fanca
FA complementation group A
disease_progression
ISO
DNA:SNP: :rs62068372 (human)
RGD
PMID:25243787
RGD:11344896
NCBI chrNW_004936641:281,119...319,796
Ensembl chrNW_004936641:281,073...324,053
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Fancd2
FA complementation group D2
ISO
mRNA,protein:increased expression:skin,nucleus:
RGD
PMID:21697891
RGD:11046262
NCBI chrNW_004936602:3,162,177...3,220,468
Ensembl chrNW_004936602:3,161,960...3,209,868
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Fbxw7
F-box and WD repeat domain containing 7
ISO
ClinVar Annotator: match by term: Cutaneous melanoma | ClinVar Annotator: match by term: Malignant melanoma of skin
ClinVar
PMID:25741868 PMID:26619011
NCBI chrNW_004936689:2,261,163...2,449,951
Ensembl chrNW_004936689:2,259,477...2,344,764
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Gpx1
glutathione peroxidase 1
ISO
mRNA:increased expression:skin of body (human)
RGD
PMID:29535818
RGD:152023655
NCBI chrNW_004936529:997,943...999,123
Ensembl chrNW_004936529:998,150...998,987
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Grm1
glutamate metabotropic receptor 1
ISO
OMIM:608035 | OMIM:612263
MouseDO
NCBI chrNW_004936625:91,229...468,242
Ensembl chrNW_004936625:90,299...466,395
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Hif1a
hypoxia inducible factor 1 subunit alpha
ISO
protein:increased expression:epidermis (human)
RGD
PMID:19558170
RGD:8695922
NCBI chrNW_004936495:5,770,988...5,816,157
Ensembl chrNW_004936495:5,770,669...5,816,157
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Hras
HRas proto-oncogene, GTPase
ISO
ClinVar Annotator: match by term: Cutaneous melanoma ClinVar Annotator: match by term: Cutaneous melanoma | ClinVar Annotator: match by term: Malignant melanoma of skin
ClinVar
PMID:1904555 PMID:3510078 PMID:11150980 PMID:12835555 PMID:16155195 PMID:16170316 PMID:16329078 PMID:16372351 PMID:16443854 PMID:16835863 PMID:16881968 PMID:16969868 PMID:17054105 PMID:17211612 PMID:17384584 PMID:17412879 PMID:17601930 PMID:17979197 PMID:18039947 PMID:18042262 PMID:18247425 PMID:18978862 PMID:19206176 PMID:19213030 PMID:19255327 PMID:19371735 PMID:19382114 PMID:19669404 PMID:19773371 PMID:20660566 PMID:20859122 PMID:20937837 PMID:20979192 PMID:21438134 PMID:21495179 PMID:21686750 PMID:21834037 PMID:21850009 PMID:22087699 PMID:22256804 PMID:22317973 PMID:22420426 PMID:22495892 PMID:22499344 PMID:22683711 PMID:22726224 PMID:22926243 PMID:23093928 PMID:23096712 PMID:23406027 PMID:23429430 PMID:23751039 PMID:23884457 PMID:24006476 PMID:24033266 PMID:24129065 PMID:24169525 PMID:24224811 PMID:24390138 PMID:24803665 PMID:25157968 PMID:25326635 PMID:25695684 PMID:25741868 PMID:25815234 PMID:25914166 PMID:26467025 PMID:26619011 PMID:26778095 PMID:27195699 PMID:27283355 PMID:27444071 PMID:27589201 PMID:28027064 PMID:28139825 PMID:28492532 PMID:29493581 PMID:30055033 PMID:30138938 PMID:30191474 PMID:31394527 PMID:31560489 PMID:31564432 PMID:31775759 PMID:32371413 PMID:32732226 PMID:33027564 PMID:33372952 PMID:34008892 PMID:34958143 PMID:168335863 More...
NCBI chrNW_004936888:375,372...378,125
Ensembl chrNW_004936888:375,377...377,958
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Icam1
intercellular adhesion molecule 1
disease_progression
ISO
DNA:missense mutation:exon:p.R241G (human)
RGD
PMID:16313300
RGD:8547698
NCBI chrNW_004936659:616,570...627,172
Ensembl chrNW_004936659:616,752...627,174
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Idh1
isocitrate dehydrogenase (NADP(+)) 1
ISO
ClinVar Annotator: match by term: Cutaneous melanoma | ClinVar Annotator: match by term: Malignant melanoma of skin
ClinVar
PMID:18772396 PMID:19657110 PMID:19798509 PMID:19818334 PMID:20946881 PMID:21352804 PMID:21446021 PMID:22160010 PMID:22397365 PMID:22417203 PMID:22898539 PMID:23558169 PMID:24606448 PMID:25043048 PMID:25157968 PMID:25741868 PMID:26619011 PMID:27993330 PMID:30231226 PMID:36201590 More...
NCBI chrNW_004936950:334,894...349,221
Ensembl chrNW_004936950:334,934...348,363
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Jmjd6
jumonji domain containing 6, arginine demethylase and lysine hydroxylase
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:30619488
NCBI chrNW_004936594:1,760,924...1,771,022
Ensembl chrNW_004936594:1,760,853...1,770,765
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Lrrc56
leucine rich repeat containing 56
ISO
ClinVar Annotator: match by term: Cutaneous melanoma ClinVar Annotator: match by term: Cutaneous melanoma | ClinVar Annotator: match by term: Malignant melanoma of skin ClinVar Annotator: match by term: Cutaneous melanoma | ClinVar Annotator: match by term: DYSPLASTIC NEVUS SYNDROME, HEREDITARY | ClinVar Annotator: match by term: Malignant melanoma of skin
ClinVar
PMID:1904555 PMID:3510078 PMID:11150980 PMID:12835555 PMID:16155195 PMID:16170316 PMID:16329078 PMID:16372351 PMID:16443854 PMID:16835863 PMID:16881968 PMID:16969868 PMID:17054105 PMID:17211612 PMID:17384584 PMID:17412879 PMID:17601930 PMID:17979197 PMID:18039947 PMID:18042262 PMID:18247425 PMID:18978862 PMID:19206176 PMID:19213030 PMID:19255327 PMID:19371735 PMID:19382114 PMID:19669404 PMID:19773371 PMID:20660566 PMID:20859122 PMID:20937837 PMID:20979192 PMID:21438134 PMID:21495179 PMID:21686750 PMID:21834037 PMID:21850009 PMID:22087699 PMID:22256804 PMID:22317973 PMID:22420426 PMID:22495892 PMID:22499344 PMID:22683711 PMID:22726224 PMID:22926243 PMID:23093928 PMID:23096712 PMID:23406027 PMID:23429430 PMID:23751039 PMID:23884457 PMID:24006476 PMID:24033266 PMID:24129065 PMID:24169525 PMID:24224811 PMID:24390138 PMID:24803665 PMID:25157968 PMID:25326635 PMID:25695684 PMID:25741868 PMID:25815234 PMID:25914166 PMID:26467025 PMID:26619011 PMID:26778095 PMID:27195699 PMID:27283355 PMID:27444071 PMID:27589201 PMID:28027064 PMID:28139825 PMID:28492532 PMID:29493581 PMID:30055033 PMID:30138938 PMID:30191474 PMID:31394527 PMID:31560489 PMID:31564432 PMID:31775759 PMID:32371413 PMID:32732226 PMID:33027564 PMID:33372952 PMID:34008892 PMID:34958143 PMID:168335863 More...
NCBI chrNW_004936888:379,622...397,647
Ensembl chrNW_004936888:382,062...402,083
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Mc1r
melanocortin 1 receptor
ISO
CTD Direct Evidence: marker/mechanism
CTD
NCBI chrNW_004936641:193,885...198,730
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Mitf
melanocyte inducing transcription factor
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:22012259 PMID:22080950
NCBI chrNW_004936603:1,682,411...1,858,295
Ensembl chrNW_004936603:1,682,513...1,858,173
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Mmp1
matrix metallopeptidase 1
disease_progression
ISO
DNA:SNPs, haplotype:promoter:multiple DNA:polymorphisms, haplotypes:promoter:multiple
RGD
PMID:20655738 PMID:22198560
RGD:8549726 RGD:8549727
NCBI chrNW_004936551:5,167,909...5,175,149
Ensembl chrNW_004936551:5,168,044...5,174,857
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Mmp2
matrix metallopeptidase 2
severity
ISO
mRNA:increased expression:skin
RGD
PMID:12404291 PMID:18251742 PMID:20966734
RGD:13204786 RGD:8657055 RGD:8657075
NCBI chrNW_004936475:7,801,356...7,825,831
Ensembl chrNW_004936475:7,801,277...7,825,851
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Mmp9
matrix metallopeptidase 9
disease progression
ISO
DNA:SNP, missense mutations:promoter, cds:-1562C>T,p.R279Q, p.P574R (human)
RGD
PMID:12404291 PMID:17346338
RGD:13204786 RGD:8547886
NCBI chrNW_004936514:7,038,240...7,045,873
Ensembl chrNW_004936514:7,037,639...7,045,793
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Naip
NLR family apoptosis inhibitory protein
exacerbates
ISO
mRNA:increased expression:zone of skin (human)
RGD
PMID:31964418
RGD:153344516
NCBI chrNW_004936549:5,000,526...5,069,110
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Oca2
OCA2 melanosomal transmembrane protein
susceptibility
ISO
DNA:snps:exon, intron:multiple (human) DNA:snp:cds:p.R419Q (rs1800407) (human) DNA:missense mutation:cds:p.H615R (rs1800414) (human)
RGD
PMID:15889046 PMID:19710684 PMID:24617981
RGD:9491818 RGD:9491829 RGD:9491831
NCBI chrNW_004936471:38,612,450...38,952,150
Ensembl chrNW_004936471:38,612,427...38,952,199
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Pdcd4
programmed cell death 4
disease_progression
ISO
mRNA:decreased expression:skin (human)
RGD
PMID:26150475
RGD:11342032
NCBI chrNW_004936486:1,684,167...1,705,387
Ensembl chrNW_004936486:1,684,135...1,705,715
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Pik3ca
phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha
ISO
ClinVar Annotator: match by term: Cutaneous melanoma ClinVar Annotator: match by term: Cutaneous melanoma | ClinVar Annotator: match by term: Malignant melanoma of skin
ClinVar
PMID:15016963 PMID:15254419 PMID:15520168 PMID:15608678 PMID:15647370 PMID:15805248 PMID:15930273 PMID:16353168 PMID:16906227 PMID:16930767 PMID:17376864 PMID:17673550 PMID:18371219 PMID:18676830 PMID:18725974 PMID:19029981 PMID:19223544 PMID:19366826 PMID:19513541 PMID:19671852 PMID:19903786 PMID:20177704 PMID:20453058 PMID:20593314 PMID:20619739 PMID:21078999 PMID:21430269 PMID:21558396 PMID:21824802 PMID:22162582 PMID:22162589 PMID:22271473 PMID:22370636 PMID:22658544 PMID:22729222 PMID:22729223 PMID:22729224 PMID:23066039 PMID:23100325 PMID:23408298 PMID:23888070 PMID:23946963 PMID:24033266 PMID:24265155 PMID:24782230 PMID:25157968 PMID:25599672 PMID:25681199 PMID:25741868 PMID:25880439 PMID:26266975 PMID:26266985 PMID:26619011 PMID:26627007 PMID:26637981 PMID:26822237 PMID:27126994 PMID:27626068 PMID:27631024 PMID:28151489 PMID:28425981 PMID:28492532 PMID:29446767 PMID:29661094 PMID:29988677 PMID:30376034 PMID:30543347 PMID:31536475 PMID:31568861 PMID:31775759 PMID:32778138 PMID:34008892 PMID:34496175 PMID:34568242 PMID:34606700 PMID:37667289 PMID:37712948 More...
NCBI chrNW_004936566:3,924,013...3,951,052
Ensembl chrNW_004936566:3,923,934...3,951,073
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Pot1
protection of telomeres 1
ISO
ClinVar Annotator: match by term: Malignant melanoma of skin ClinVar Annotator: match by term: DYSPLASTIC NEVUS SYNDROME, HEREDITARY
ClinVar
PMID:24686846 PMID:25741868 PMID:26467025 PMID:28492532 PMID:30451293 PMID:30586141 PMID:34193977 PMID:36876055 PMID:37140166 More...
NCBI chrNW_004936605:836,824...919,099
Ensembl chrNW_004936605:836,769...920,201
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Pten
phosphatase and tensin homolog
ISO
ClinVar Annotator: match by term: DYSPLASTIC NEVUS SYNDROME, HEREDITARY ClinVar Annotator: match by term: Cutaneous melanoma | ClinVar Annotator: match by term: DYSPLASTIC NEVUS SYNDROME, HEREDITARY | ClinVar Annotator: match by term: Malignant melanoma of skin
ClinVar
PMID:1945792 PMID:9467011 PMID:9915974 PMID:10866302 PMID:11051241 PMID:11504908 PMID:11875759 PMID:11948419 PMID:16773562 PMID:17942903 PMID:18767981 PMID:19457929 PMID:20085938 PMID:20300775 PMID:20301661 PMID:20926450 PMID:21190448 PMID:21194675 PMID:21659347 PMID:21822720 PMID:21824802 PMID:21828076 PMID:22266152 PMID:22320991 PMID:22327138 PMID:22595938 PMID:23335809 PMID:23361946 PMID:23399955 PMID:23470840 PMID:24033266 PMID:24055113 PMID:24292679 PMID:24778394 PMID:25157968 PMID:25527629 PMID:25741868 PMID:25980754 PMID:26418532 PMID:26619011 PMID:26798346 PMID:27477328 PMID:27535533 PMID:28475857 PMID:28492532 PMID:28677221 PMID:29359449 PMID:29706350 PMID:29785012 PMID:30311380 PMID:30528446 PMID:31159747 PMID:31636093 PMID:32350270 PMID:32442409 PMID:32832836 PMID:32885271 PMID:33077954 PMID:34793697 PMID:38645101 More...
NCBI chrNW_004936735:1,252,414...1,338,318
Ensembl chrNW_004936735:1,252,414...1,338,323
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Slc45a2
solute carrier family 45 member 2
ISO
ClinVar Annotator: match by term: Malignant melanoma of skin
ClinVar
PMID:15714523 PMID:17044855 PMID:17999355 PMID:18563784 PMID:18683857 PMID:19578363 PMID:28492532 More...
NCBI chrNW_004936518:7,094,949...7,139,961
Ensembl chrNW_004936518:7,095,038...7,137,277
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Stat3
signal transducer and activator of transcription 3
disease_progression
ISO
RGD
PMID:21876460
RGD:8694297
NCBI chrNW_004936490:17,119,189...17,178,402
Ensembl chrNW_004936490:17,117,290...17,178,402
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Stk11
serine/threonine kinase 11
ISO
ClinVar Annotator: match by term: DYSPLASTIC NEVUS SYNDROME, HEREDITARY
ClinVar
PMID:10201537 PMID:10208439 PMID:23555315 PMID:23993471 PMID:24033266 PMID:24830819 PMID:25142776 PMID:25157968 PMID:25179843 PMID:25186627 PMID:25473901 PMID:25741868 PMID:25980754 PMID:26467025 PMID:26580448 PMID:26898890 PMID:26928227 PMID:26976419 PMID:27443514 PMID:27621404 PMID:28135145 PMID:28202063 PMID:28492532 PMID:28821472 PMID:28873162 PMID:29368341 PMID:29458332 PMID:33471991 More...
NCBI chrNW_004936588:579,816...601,033
Ensembl chrNW_004936588:579,816...603,654
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Tert
telomerase reverse transcriptase
ISO
CTD Direct Evidence: marker/mechanism
CTD
NCBI chrNW_004936815:468,987...492,666
Ensembl chrNW_004936815:469,020...491,697
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Tp53
tumor protein p53
ISO
ClinVar Annotator: match by term: Cutaneous melanoma | ClinVar Annotator: match by term: DYSPLASTIC NEVUS SYNDROME, HEREDITARY | ClinVar Annotator: match by term: Malignant melanoma of skin ClinVar Annotator: match by term: Cutaneous melanoma | ClinVar Annotator: match by term: Malignant melanoma of skin
ClinVar
PMID:253702 PMID:1349175 PMID:1359493 PMID:1565143 PMID:1565144 PMID:1569604 PMID:1631137 PMID:1631151 PMID:1673792 PMID:1683921 PMID:1686725 PMID:1915267 PMID:1978757 PMID:2046748 PMID:3784963 PMID:6736287 PMID:7651740 PMID:7707106 PMID:7718482 PMID:7732013 PMID:7881428 PMID:7885831 PMID:7887414 PMID:8023157 PMID:8062826 PMID:8080050 PMID:8099841 PMID:8118819 PMID:8164043 PMID:8308926 PMID:8336941 PMID:8344492 PMID:8364550 PMID:8401536 PMID:8402598 PMID:8423216 PMID:8425176 PMID:8464896 PMID:8479749 PMID:8527048 PMID:8631304 PMID:8633021 PMID:8649776 PMID:8688334 PMID:8718514 PMID:8825920 PMID:8829627 PMID:8829653 PMID:8869100 PMID:9049183 PMID:9049184 PMID:9150393 PMID:9242456 PMID:9290701 PMID:9364015 PMID:9399658 PMID:9399838 PMID:9407971 PMID:9472631 PMID:9546439 PMID:9569050 PMID:9572492 PMID:9598730 PMID:9632751 PMID:9662334 PMID:9667734 PMID:9704930 PMID:9825943 PMID:10064694 PMID:10089074 PMID:10229196 PMID:10411893 PMID:10432928 PMID:10519380 PMID:10567903 PMID:10589545 PMID:10616528 PMID:10713666 PMID:10732753 PMID:10761705 PMID:10797439 PMID:10864200 PMID:10871862 PMID:10914716 PMID:10922393 PMID:11051239 PMID:11139324 PMID:11180592 PMID:11313981 PMID:11370630 PMID:11429705 PMID:11479205 PMID:11593407 PMID:11668501 PMID:11782540 PMID:11793474 PMID:11867759 PMID:11896595 PMID:11920788 PMID:11920959 PMID:12007217 PMID:12034820 PMID:12124823 PMID:12509279 PMID:12672316 PMID:12702523 PMID:12726864 PMID:12782597 PMID:12826609 PMID:12909720 PMID:12917626 PMID:14559903 PMID:14584079 PMID:14743206 PMID:15004724 PMID:15017592 PMID:15037740 PMID:15077194 PMID:15138567 PMID:15381368 PMID:15390294 PMID:15541116 PMID:15580553 PMID:15607980 PMID:15607981 PMID:15722483 PMID:15825182 PMID:15850016 PMID:15925506 PMID:15951970 PMID:15958617 PMID:15977174 PMID:15982667 PMID:15993273 PMID:16206219 PMID:16209708 PMID:16258005 PMID:16288208 PMID:16312222 PMID:16322298 PMID:16401470 PMID:16474844 PMID:16489069 PMID:16494995 PMID:16508005 PMID:16633321 PMID:16682957 PMID:16736287 PMID:16741917 PMID:16778209 PMID:16793544 PMID:16818505 PMID:16827139 PMID:16861262 PMID:17015838 PMID:17308077 PMID:17311302 PMID:17390010 PMID:17401428 PMID:17417627 PMID:17427234 PMID:17530187 PMID:17540308 PMID:17541742 PMID:17567834 PMID:17572079 PMID:17606709 PMID:17636407 PMID:17724467 PMID:17875924 PMID:17881637 PMID:18208484 PMID:18307025 PMID:18453682 PMID:18511570 PMID:18555592 PMID:18685109 PMID:18818522 PMID:18937320 PMID:18978813 PMID:19012332 PMID:19101993 PMID:19147582 PMID:19171880 PMID:19336573 PMID:19367569 PMID:19378321 PMID:19454241 PMID:19462533 PMID:19468865 PMID:19556618 PMID:19681600 PMID:19834951 PMID:19850740 PMID:19913028 PMID:20013323 PMID:20028212 PMID:20113312 PMID:20127978 PMID:20128691 PMID:20182602 PMID:20195489 PMID:20234365 PMID:20407015 PMID:20505364 PMID:20506564 PMID:20516128 PMID:20522432 PMID:20586629 PMID:20593220 PMID:20693561 PMID:20805372 PMID:20972454 PMID:21059199 PMID:21113594 PMID:21118481 PMID:21159183 PMID:21187651 PMID:21232794 PMID:21305319 PMID:21343334 PMID:21356188 PMID:21445056 PMID:21484931 PMID:21514416 PMID:21519010 PMID:21522129 PMID:21535297 PMID:21552135 PMID:21590121 PMID:21601526 PMID:21626334 PMID:21674059 PMID:21760960 PMID:21760996 PMID:21761402 PMID:22006311 PMID:22110706 PMID:22114072 PMID:22186996 PMID:22198284 PMID:22233476 PMID:22265402 PMID:22427690 PMID:22484423 PMID:22553421 PMID:22672556 PMID:22713868 PMID:22811390 PMID:22822097 PMID:22869713 PMID:22887876 PMID:22899716 PMID:22915647 PMID:22919068 PMID:22923379 PMID:22955915 PMID:22983585 PMID:22999923 PMID:23031740 PMID:23124483 PMID:23161690 PMID:23172776 PMID:23246812 PMID:23259501 PMID:23263379 PMID:23264849 PMID:23265383 PMID:23334668 PMID:23340422 PMID:23484829 PMID:23538418 PMID:23625637 PMID:23630318 PMID:23667202 PMID:23713777 PMID:23792586 PMID:23894400 PMID:23950206 PMID:23967324 PMID:24033266 PMID:24038938 PMID:24065105 PMID:24076587 PMID:24381225 PMID:24384472 PMID:24487413 PMID:24501221 PMID:24573247 PMID:24603336 PMID:24641375 PMID:24651012 PMID:24651015 PMID:24677579 PMID:24702488 PMID:24728327 PMID:24744791 PMID:24810334 PMID:24857548 PMID:25157968 PMID:25186627 PMID:25256166 PMID:25293557 PMID:25339994 PMID:25404506 PMID:25428789 PMID:25433984 PMID:25503501 PMID:25525159 PMID:25584008 PMID:25584637 PMID:25612911 PMID:25619955 PMID:25741868 PMID:25757876 PMID:25765855 PMID:25787918 PMID:25896519 PMID:25925845 PMID:25927356 PMID:25952993 PMID:25980754 PMID:26014290 PMID:26022348 PMID:26024390 PMID:26230955 PMID:26270727 PMID:26332594 PMID:26425688 PMID:26467025 PMID:26497680 PMID:26556299 PMID:26580448 PMID:26585234 PMID:26619011 PMID:26655088 PMID:26681312 PMID:26787237 PMID:26822237 PMID:26845104 PMID:26878390 PMID:26911350 PMID:26976419 PMID:27022024 PMID:27077130 PMID:27149858 PMID:27179933 PMID:27189670 PMID:27276561 PMID:27328919 PMID:27374712 PMID:27458004 PMID:27463065 PMID:27489289 PMID:27493922 PMID:27523101 PMID:27533082 PMID:27557517 PMID:27616075 PMID:27680515 PMID:27683180 PMID:27714481 PMID:27724982 PMID:27730344 PMID:27813088 PMID:27895058 PMID:27911860 PMID:27959731 PMID:27993330 PMID:28135145 PMID:28152038 PMID:28176830 PMID:28279309 PMID:28369373 PMID:28453743 PMID:28472496 PMID:28477316 PMID:28492532 PMID:28724667 PMID:28772286 PMID:28802053 PMID:28861920 PMID:28873162 PMID:28975465 PMID:29025599 PMID:29058119 PMID:29070607 PMID:29076966 PMID:29126202 PMID:29324801 PMID:29470806 PMID:29478780 PMID:29489754 PMID:29581140 PMID:29666004 PMID:29752822 PMID:29753700 PMID:29979965 PMID:30076369 PMID:30128536 PMID:30152528 PMID:30216591 PMID:30224644 PMID:30287823 PMID:30299350 PMID:30306255 PMID:30311369 PMID:30327374 PMID:30352134 PMID:30450585 PMID:30630526 PMID:30675318 PMID:30709381 PMID:30720243 PMID:30730202 PMID:30816478 PMID:30840781 PMID:31016814 PMID:31081129 PMID:31105275 PMID:31119730 PMID:31127191 PMID:31206626 PMID:31296311 PMID:31748977 PMID:31775759 PMID:31882575 PMID:32000721 PMID:32019277 PMID:32164171 PMID:32187361 PMID:32318955 PMID:32371905 PMID:32475984 PMID:32658383 PMID:32817165 PMID:32906206 PMID:32980694 PMID:33087929 PMID:33138793 PMID:33208383 PMID:33245408 PMID:33257846 PMID:33300245 PMID:33332384 PMID:33372952 PMID:33407742 PMID:33471991 PMID:33633026 PMID:33758026 PMID:33818021 PMID:33840814 PMID:34026625 PMID:34240179 PMID:34266904 PMID:34675114 PMID:34793666 PMID:34805717 PMID:35033608 PMID:35127508 PMID:35820297 PMID:35938033 PMID:36988593 More...
NCBI chrNW_004936595:919,807...935,367
Ensembl chrNW_004936595:919,428...925,425
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Tp73
tumor protein p73
ISO
mRNA:increased expression:skin of body (human)
RGD
PMID:30420492
RGD:151347580
NCBI chrNW_004936737:171,894...211,464
Ensembl chrNW_004936737:172,467...211,464
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Tyr
tyrosinase
susceptibility
ISO
DNA:missense mutation:cds:p.R402Q(human)
RGD
PMID:21906913
RGD:8694390
NCBI chrNW_004936736:421,623...519,085
Ensembl chrNW_004936736:421,598...519,253
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Vdr
vitamin D receptor
susceptibility no_association
ISO
DNA:missense mutation, silent mutation: :p,M1T, p.I352 (c.1056T>C) (rs2228570, rs731236) (human) DNA:SNPs: :multiple
RGD
PMID:16990805 PMID:19615888 PMID:22576141
RGD:8157629 RGD:8158071 RGD:8158075
NCBI chrNW_004936512:5,741,836...5,800,999
Ensembl chrNW_004936512:5,740,748...5,801,109
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Xrcc3
X-ray repair cross complementing 3
ISO
CTD Direct Evidence: marker/mechanism
CTD
NCBI chrNW_004936621:1,462,441...1,474,937
Ensembl chrNW_004936621:1,462,428...1,473,868
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Ctcf
CCCTC-binding factor
ISO
DNA:mutations:multiple (human)
RGD
PMID:27974201
RGD:151356739
NCBI chrNW_004936475:17,987,137...18,031,733
Ensembl chrNW_004936475:17,987,156...18,031,760
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Ddx5
DEAD-box helicase 5
ISO
protein:increased expression:foreskin (human)
RGD
PMID:22548649
RGD:9850272
NCBI chrNW_004936541:5,005,211...5,013,439
Ensembl chrNW_004936541:5,004,692...5,013,350
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Fat1
FAT atypical cadherin 1
disease_progression
ISO
associated with Neoplasm Metastasis
RGD
PMID:33328637
RGD:151347447
NCBI chrNW_004936554:2,872,729...2,996,821
Ensembl chrNW_004936554:2,872,713...2,996,823
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Fgf10
fibroblast growth factor 10
ISO
Pten conditional KO mouse
RGD
PMID:24582960
RGD:126928134
NCBI chrNW_004936480:18,114,231...18,195,884
Ensembl chrNW_004936480:18,114,204...18,195,898
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Fyn
FYN proto-oncogene, Src family tyrosine kinase
ISO
MouseDO
NCBI chrNW_004936679:388,500...588,518
Ensembl chrNW_004936679:387,387...443,880
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Knstrn
kinetochore localized astrin (SPAG5) binding protein
ISO
DNA:mutation:cds: p.Ser24Phe(human) DNA:mutation:cds: p.Ala40Glu (human)
RGD
PMID:25194279 PMID:30972880
RGD:28867225 RGD:28867226
NCBI chrNW_004936471:3,838,507...3,849,521
Ensembl chrNW_004936471:3,838,612...3,848,751
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Pten
phosphatase and tensin homolog
ameliorates
ISO
RGD
PMID:24582960
RGD:126928134
NCBI chrNW_004936735:1,252,414...1,338,318
Ensembl chrNW_004936735:1,252,414...1,338,323
Term paths to the root one shortest all shortest one longest all longest one shortest and longest all