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RGD DISEASE ONTOLOGY - ANNOTATIONS

RGD uses the Human Disease Ontology (DO, https://disease-ontology.org/) for disease curation across species. RGD automatically downloads each new release of the ontology on a monthly basis. Some additional terms which are required for RGD's curation purposes but are not currently covered in the official version of DO have been added. As corresponding terms are added to DO, these custom terms are retired and the DO terms substituted in existing annotations and subsequently used for curation.
Term:ovary adenocarcinoma
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Accession:DOID:3713 term browser browse the term
Definition:An ovarian carcinoma that derives_from epithelial cells of glandular origin. (DO)
Synonyms:exact_synonym: ovarian adenoacanthoma;   ovarian adenocarcinoma
 related_synonym: adenocarcinoma of the ovary
 primary_id: RDO:9002507
 xref: EFO:0006460;   NCI:C129858;   NCI:C7700
For additional species annotation, visit the Alliance of Genome Resources.


show annotations for term's descendants           Sort by:
ovary adenocarcinoma term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ccnd3 cyclin D3 disease_progression ISO RGD PMID:17885491 RGD:2316011 NCBI chr 9:13,394,161...13,400,341
Ensembl chr 9:13,394,169...13,489,371 		JBrowse link
G Cyp24a1 cytochrome P450, family 24, subfamily a, polypeptide 1 ISO mRNA:increased expression:ovary (human) RGD PMID:16180015 RGD:151361183 NCBI chr 3:159,275,947...159,290,383
Ensembl chr 3:159,275,947...159,290,383 		JBrowse link
G Pramex1 PRAME like, X-linked 1 severity ISO mRNA, protein:increased expression:female gonad (human) RGD PMID:18709641 RGD:11535054 NCBI chr  X:98,567,994...98,574,654
Ensembl chr  X:98,569,415...98,572,096 		JBrowse link
ovarian serous cystadenocarcinoma term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Birc3 baculoviral IAP repeat-containing 3 exacerbates ISO mRNA:increased expression:ovary (human) RGD PMID:31964418 RGD:153344516 NCBI chr 8:5,000,844...5,028,470
Ensembl chr 8:5,000,845...5,015,802 		JBrowse link
ovary serous adenocarcinoma term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arid1a AT-rich interaction domain 1A ISO ClinVar Annotator: match by term: Primary low grade serous adenocarcinoma of ovary ClinVar NCBI chr 5:145,908,173...145,981,552
Ensembl chr 5:145,908,181...145,985,564 		JBrowse link
G Brca1 BRCA1, DNA repair associated ISO ClinVar Annotator: match by term: Ovarian serous surface papillary adenocarcinoma ClinVar PMID:16084575 PMID:16455195 PMID:16949048 PMID:17100994 PMID:19656164 More... NCBI chr10:86,417,441...86,477,762
Ensembl chr10:86,418,000...86,477,304 		JBrowse link
G Brca2 BRCA2, DNA repair associated ISO ClinVar Annotator: match by term: Ovarian serous surface papillary adenocarcinoma ClinVar PMID:16793542 PMID:18704680 PMID:25741868 NCBI chr12:59,492...103,789
Ensembl chr12:59,819...100,567 		JBrowse link
G Bsg basigin ISO protein:increased expression:ovary RGD PMID:16633062 RGD:2289053 NCBI chr 7:9,993,170...10,000,387
Ensembl chr 7:9,993,170...10,000,387 		JBrowse link
G Kras KRAS proto-oncogene, GTPase ISO ClinVar Annotator: match by term: Primary low grade serous adenocarcinoma of ovary ClinVar PMID:7773929 PMID:8439212 PMID:12720172 PMID:15093544 PMID:15696205 More... NCBI chr 4:178,185,418...178,218,484 JBrowse link
G Tp53 tumor protein p53 ISO DNA, protein:loss of heterozygosity, increased expression:ovary RGD PMID:1310251 RGD:2290540 NCBI chr10:54,300,070...54,311,525
Ensembl chr10:54,300,048...54,311,524 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  disease 19134
    disease of cellular proliferation 7888
      cancer 5717
        cell type cancer 3782
          carcinoma 3274
            adenocarcinoma 1700
              ovary adenocarcinoma 10
                endometrioid ovary carcinoma 0
                ovarian clear cell adenocarcinoma 0
                ovarian cystadenocarcinoma + 1
                ovarian mucinous adenocarcinoma 0
                ovary serous adenocarcinoma + 7
                rete ovarii adenocarcinoma 0
Path 2
Term Annotations click to browse term
  disease 19134
    disease of anatomical entity 18447
      Urogenital Diseases 5391
        Female Urogenital Diseases and Pregnancy Complications 2667
          Female Urogenital Diseases 2190
            female reproductive system disease 2187
              Adnexal Diseases 1075
                ovarian disease 1066
                  Ovarian Neoplasms 754
                    ovarian cancer 635
                      ovary epithelial cancer 120
                        malignant ovarian surface epithelial-stromal neoplasm 95
                          ovarian carcinoma 95
                            ovary adenocarcinoma 10
                              endometrioid ovary carcinoma 0
                              ovarian clear cell adenocarcinoma 0
                              ovarian cystadenocarcinoma + 1
                              ovarian mucinous adenocarcinoma 0
                              ovary serous adenocarcinoma + 7
                              rete ovarii adenocarcinoma 0
paths to the root