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RGD DISEASE ONTOLOGY - ANNOTATIONS

RGD uses the Human Disease Ontology (DO, https://disease-ontology.org/) for disease curation across species. RGD automatically downloads each new release of the ontology on a monthly basis. Some additional terms which are required for RGD's curation purposes but are not currently covered in the official version of DO have been added. As corresponding terms are added to DO, these custom terms are retired and the DO terms substituted in existing annotations and subsequently used for curation.
Term:cystadenocarcinoma
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Accession:DOID:3111 term browser browse the term
Definition:An adenocarcinoma that derives_from epithelial cells originating in glandular tissue, in which cystic accumulations of retained secretions are formed. (DO)
Synonyms:exact_synonym: cystadenocarcinomas
 primary_id: MESH:D003536
 xref: EFO:0006387;   ICDO:8440/3;   NCI:C2971
For additional species annotation, visit the Alliance of Genome Resources.


show annotations for term's descendants           Sort by:
endometrial serous adenocarcinoma term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atm ATM serine/threonine kinase ISO ClinVar Annotator: match by term: Uterine corpus serous adenocarcinoma ClinVar NCBI chr 8:53,828,741...53,932,773
Ensembl chr 8:53,831,093...53,932,437 		JBrowse link
G Brca2 BRCA2, DNA repair associated susceptibility ISO DNA:deletion: :6174delT RGD PMID:16650962 RGD:2289045 NCBI chr12:59,492...103,789
Ensembl chr12:59,819...100,567 		JBrowse link
G Msh6 mutS homolog 6 ISO ClinVar Annotator: match by term: Papillary carcinoma of the corpus uteri ClinVar PMID:18269114 PMID:21642682 PMID:24362816 PMID:25741868 PMID:28492532 More... NCBI chr 6:6,562,631...6,579,995
Ensembl chr 6:6,562,632...6,579,956 		JBrowse link
mucinous cystadenocarcinoma term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lhcgr luteinizing hormone/choriogonadotropin receptor ISO RGD PMID:11994539 RGD:2289157 NCBI chr 6:5,661,871...5,728,109
Ensembl chr 6:5,661,871...5,724,521 		JBrowse link
G Sgk1 serum/glucocorticoid regulated kinase 1 ISO RGD PMID:11994539 RGD:2289157 NCBI chr 1:22,980,257...23,098,122
Ensembl chr 1:22,980,261...23,098,283 		JBrowse link
ovarian serous cystadenocarcinoma term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Birc3 baculoviral IAP repeat-containing 3 exacerbates ISO mRNA:increased expression:ovary (human) RGD PMID:31964418 RGD:153344516 NCBI chr 8:5,000,844...5,028,470
Ensembl chr 8:5,000,845...5,015,802 		JBrowse link
ovary serous adenocarcinoma term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arid1a AT-rich interaction domain 1A ISO ClinVar Annotator: match by term: Primary low grade serous adenocarcinoma of ovary ClinVar NCBI chr 5:145,908,173...145,981,552
Ensembl chr 5:145,908,181...145,985,564 		JBrowse link
G Brca1 BRCA1, DNA repair associated ISO ClinVar Annotator: match by term: Ovarian serous surface papillary adenocarcinoma ClinVar PMID:16084575 PMID:16455195 PMID:16949048 PMID:17100994 PMID:19656164 More... NCBI chr10:86,417,441...86,477,762
Ensembl chr10:86,418,000...86,477,304 		JBrowse link
G Brca2 BRCA2, DNA repair associated ISO ClinVar Annotator: match by term: Ovarian serous surface papillary adenocarcinoma ClinVar PMID:16793542 PMID:18704680 PMID:25741868 NCBI chr12:59,492...103,789
Ensembl chr12:59,819...100,567 		JBrowse link
G Bsg basigin ISO protein:increased expression:ovary RGD PMID:16633062 RGD:2289053 NCBI chr 7:9,993,170...10,000,387
Ensembl chr 7:9,993,170...10,000,387 		JBrowse link
G Kras KRAS proto-oncogene, GTPase ISO ClinVar Annotator: match by term: Primary low grade serous adenocarcinoma of ovary ClinVar PMID:7773929 PMID:8439212 PMID:12720172 PMID:15093544 PMID:15696205 More... NCBI chr 4:178,185,418...178,218,484 JBrowse link
G Tp53 tumor protein p53 ISO DNA, protein:loss of heterozygosity, increased expression:ovary RGD PMID:1310251 RGD:2290540 NCBI chr10:54,300,070...54,311,525
Ensembl chr10:54,300,048...54,311,524 		JBrowse link
serous cystadenocarcinoma term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cdkn1a cyclin-dependent kinase inhibitor 1A disease_progression ISO RGD PMID:16012716 RGD:8662305 NCBI chr20:7,149,177...7,159,727
Ensembl chr20:7,149,217...7,159,585 		JBrowse link
G Lhcgr luteinizing hormone/choriogonadotropin receptor ISO RGD PMID:11994539 RGD:2289157 NCBI chr 6:5,661,871...5,728,109
Ensembl chr 6:5,661,871...5,724,521 		JBrowse link
G Sgk1 serum/glucocorticoid regulated kinase 1 ISO RGD PMID:11994539 RGD:2289157 NCBI chr 1:22,980,257...23,098,122
Ensembl chr 1:22,980,261...23,098,283 		JBrowse link
G Tp53 tumor protein p53 disease_progression ISO RGD PMID:16012716 RGD:8662305 NCBI chr10:54,300,070...54,311,525
Ensembl chr10:54,300,048...54,311,524 		JBrowse link
G Xpc XPC complex subunit, DNA damage recognition and repair factor disease_progression ISO DNA:SNPs: :rs1124303, rs3731108 (human) RGD PMID:21751198 RGD:10401086 NCBI chr 4:123,993,670...124,020,922
Ensembl chr 4:123,993,666...124,021,010 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  disease 19134
    disease of cellular proliferation 7888
      Neoplasms by Histologic Type 5345
        Glandular and Epithelial Neoplasms 3801
          Cystic, Mucinous, and Serous Neoplasms 34
            cystadenocarcinoma 13
              Florid Cystic Endosalpingiosis of the Uterus 0
              bile duct cystadenocarcinoma 0
              mucinous cystadenocarcinoma + 2
              ovarian cystadenocarcinoma + 1
              pancreatic cystadenocarcinoma + 0
              papillary cystadenocarcinoma 0
              serous cystadenocarcinoma + 13
Path 2
Term Annotations click to browse term
  disease 19134
    disease of cellular proliferation 7888
      cancer 5717
        cell type cancer 3782
          carcinoma 3274
            adenocarcinoma 1700
              cystadenocarcinoma 13
                Florid Cystic Endosalpingiosis of the Uterus 0
                bile duct cystadenocarcinoma 0
                mucinous cystadenocarcinoma + 2
                ovarian cystadenocarcinoma + 1
                pancreatic cystadenocarcinoma + 0
                papillary cystadenocarcinoma 0
                serous cystadenocarcinoma + 13
paths to the root