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RGD DISEASE ONTOLOGY - ANNOTATIONS

RGD uses the Human Disease Ontology (DO, https://disease-ontology.org/) for disease curation across species. RGD automatically downloads each new release of the ontology on a monthly basis. Some additional terms which are required for RGD's curation purposes but are not currently covered in the official version of DO have been added. As corresponding terms are added to DO, these custom terms are retired and the DO terms substituted in existing annotations and subsequently used for curation.

Term:glomerulonephritis
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Accession:DOID:2921 term browser browse the term
Definition:A nephritis that causes inflammation of the glomeruli located_in kidney. (DO)
Synonyms:exact_synonym: Bright Disease;   Glomerulonephritides
 related_synonym: Primary Glomerulonephritis
 primary_id: MESH:D005921
 xref: GARD:6516;   MONDO:0002462;   NCI:C26784
For additional species annotation, visit the Alliance of Genome Resources.


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glomerulonephritis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ace angiotensin I converting enzyme ISO RGD PMID:19164508 RGD:2325229 NCBI chrNW_004624849:998,262...1,019,305
Ensembl chrNW_004624849:998,277...1,019,521
JBrowse link
G Adm adrenomedullin ISO associated with Anti-Glomerular Basement Membrane Disease
CTD Direct Evidence: marker/mechanism
RGD
CTD
PMID:15063164 PMID:15680492 PMID:16735801 PMID:20431304 RGD:1625317 RGD:2325320 NCBI chrNW_004624766:2,402,152...2,404,343
Ensembl chrNW_004624766:2,401,769...2,404,446
JBrowse link
G Agt angiotensinogen disease_progression ISO CTD Direct Evidence: marker/mechanism CTD
RGD
PMID:11459117 PMID:15888567 RGD:13432360 NCBI chrNW_004624775:18,846,222...18,856,093
Ensembl chrNW_004624775:18,849,118...18,855,577
JBrowse link
G Agtr2 angiotensin II receptor type 2 ISO RGD PMID:19139720 RGD:6903845 NCBI chrNW_004624967:327,627...332,000
Ensembl chrNW_004624967:329,284...330,372
JBrowse link
G Aif1 allograft inflammatory factor 1 ISO protein:increased expression:kidney (rat) RGD PMID:17035944 RGD:2313038 NCBI chrNW_004624754:24,590,071...24,591,913
Ensembl chrNW_004624754:24,590,071...24,591,904
JBrowse link
G Alb albumin ISO CTD Direct Evidence: marker/mechanism CTD PMID:3160244 PMID:6343549 PMID:6769622 PMID:8501856 PMID:17161813 More... NCBI chrNW_004624735:34,105,237...34,123,479
Ensembl chrNW_004624735:34,104,537...34,123,624
JBrowse link
G Alox5ap arachidonate 5-lipoxygenase activating protein onset ISO protein:increased expression:glomerulus, endothelial cell, cytoplasm (rat) RGD PMID:14733414 RGD:2313931 NCBI chrNW_004624776:7,475,269...7,646,805
Ensembl chrNW_004624776:7,475,200...7,506,283
JBrowse link
G Anxa5 annexin A5 ISO RGD PMID:11271515 RGD:7241853 NCBI chrNW_004624777:1,921,354...1,969,772
Ensembl chrNW_004624777:1,919,602...1,970,059
JBrowse link
G Apoe apolipoprotein E ISO Apoe(-/-) Id3(-/-) double knockout RGD PMID:21801865 RGD:6903286 NCBI chrNW_004624907:1,752,322...1,755,308 JBrowse link
G Axl AXL receptor tyrosine kinase ISO RGD PMID:11290560 RGD:1579882 NCBI chrNW_004624907:76,236...106,765
Ensembl chrNW_004624907:77,806...106,228
JBrowse link
G Bcl2l11 BCL2 like 11 ISO RGD PMID:10576740 RGD:734641 NCBI chrNW_004624749:1,033,824...1,130,099
Ensembl chrNW_004624749:1,091,096...1,125,341
JBrowse link
G Bdkrb1 bradykinin receptor B1 ISO RGD PMID:20448019 RGD:7241551 NCBI chrNW_004624734:8,545,707...8,549,846
Ensembl chrNW_004624734:8,548,356...8,549,414
JBrowse link
G C1qa complement C1q A chain susceptibility ISO DNA:nonsense mutation (human) RGD PMID:8840296 RGD:1600549 NCBI chrNW_004624764:7,363,615...7,366,408
Ensembl chrNW_004624764:7,363,567...7,366,617
JBrowse link
G C3 complement C3 ISO RGD PMID:11950907 RGD:5129550 NCBI chrNW_004624828:3,773,816...3,798,077
Ensembl chrNW_004624828:3,770,221...3,797,946
JBrowse link
G C6 complement C6 ISO RGD PMID:10807586 RGD:1600489 NCBI chrNW_004624759:13,775,339...13,842,415
Ensembl chrNW_004624759:13,775,358...13,842,648
JBrowse link
G Ccl1 C-C motif chemokine ligand 1 ISO CTD Direct Evidence: marker/mechanism RGD
CTD
PMID:10385480 PMID:11157384 RGD:8693624 NCBI chrNW_004624875:2,224,784...2,229,465 JBrowse link
G Ccl5 C-C motif chemokine ligand 5 ISO CTD Direct Evidence: marker/mechanism CTD PMID:10385480 NCBI chrNW_004624875:3,334,136...3,342,085
Ensembl chrNW_004624875:3,334,078...3,341,614
JBrowse link
G Cd163 CD163 molecule ISO associated with liver disease;protein:increased expression:blood serum (human) RGD PMID:26339412 RGD:11251207 NCBI chrNW_004624860:3,976,746...4,000,349
Ensembl chrNW_004624860:3,975,747...4,000,349
JBrowse link
G Cfd complement factor D ISO CTD Direct Evidence: marker/mechanism CTD PMID:14675043 NCBI chrNW_004624828:7,714,926...7,717,139
Ensembl chrNW_004624828:7,711,537...7,717,337
JBrowse link
G Cfh complement factor H ISO RGD PMID:17344423 RGD:7365002 NCBI chrNW_004624798:3,332,549...3,414,435 JBrowse link
G Cfi complement factor I ISO MouseDO NCBI chrNW_004624830:111,123...151,668
Ensembl chrNW_004624830:111,004...151,514
JBrowse link
G Cndp1 carnosine dipeptidase 1 ISO RGD PMID:20851293 RGD:7207223 NCBI chrNW_004624806:6,113,052...6,169,943
Ensembl chrNW_004624806:6,113,227...6,169,745
JBrowse link
G Col4a3 collagen type IV alpha 3 chain ISO RGD PMID:11158397 RGD:1600928 NCBI chrNW_004624843:1,557,756...1,623,936 JBrowse link
G Col4a4 collagen type IV alpha 4 chain ISO ClinVar Annotator: match by term: Glomerulonephritis ClinVar PMID:12028435 PMID:12325029 PMID:16467446 PMID:17216251 PMID:17942953 More... NCBI chrNW_004624843:1,364,674...1,486,813
Ensembl chrNW_004624843:1,364,674...1,486,250
JBrowse link
G Cpb2 carboxypeptidase B2 ISO RGD PMID:18612543 RGD:7243117 NCBI chrNW_004624748:8,850,128...8,927,986
Ensembl chrNW_004624748:8,849,900...8,928,853
JBrowse link
G Csf1 colony stimulating factor 1 ISO RGD PMID:11477167 RGD:7257579 NCBI chrNW_004624772:5,663,374...5,705,965
Ensembl chrNW_004624772:5,663,070...5,707,753
JBrowse link
G Cx3cl1 C-X3-C motif chemokine ligand 1 ISO mRNA, protein:increased expression:glomerulus, urine RGD PMID:14605272 RGD:4891995 NCBI chrNW_004624746:28,677,956...28,688,638
Ensembl chrNW_004624746:28,677,709...28,689,122
JBrowse link
G Cx3cr1 C-X3-C motif chemokine receptor 1 ISO mRNA:increased expression:glomerulus RGD PMID:10432400 PMID:14605272 RGD:4891995 RGD:4892027 NCBI chrNW_004624731:1,705,953...1,719,452
Ensembl chrNW_004624731:1,706,043...1,719,452
JBrowse link
G Cxcl8 C-X-C motif chemokine ligand 8 ISO CTD Direct Evidence: marker/mechanism CTD PMID:9403216 PMID:10910440 NCBI chrNW_004624730:1,744,097...1,747,206
Ensembl chrNW_004624730:1,743,916...1,747,293
JBrowse link
G Cxcr3 C-X-C motif chemokine receptor 3 ISO CTD Direct Evidence: marker/mechanism CTD PMID:12517959 NCBI chrNW_004624903:1,958,323...1,961,789
Ensembl chrNW_004624903:1,958,698...1,961,763
JBrowse link
G Des desmin ISO CTD Direct Evidence: marker/mechanism CTD PMID:20962747 NCBI chrNW_004624823:5,624,958...5,632,234
Ensembl chrNW_004624823:5,622,283...5,632,283
JBrowse link
G Esr1 estrogen receptor 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:20962747 NCBI chrNW_004624785:6,164,507...6,601,302
Ensembl chrNW_004624785:6,164,379...6,601,326
JBrowse link
G F2 coagulation factor II, thrombin ISO protein:increased expression;urine RGD PMID:15164604 PMID:17519558 RGD:6893586 RGD:6893593 NCBI chrNW_004624767:1,876,974...1,887,720
Ensembl chrNW_004624767:1,877,024...1,887,958
JBrowse link
G Fas Fas cell surface death receptor treatment ISO CTD Direct Evidence: marker/mechanism RGD
CTD
PMID:9466307 PMID:21880982 PMID:36999444 RGD:8686428 NCBI chrNW_004624791:15,290,022...15,315,848
Ensembl chrNW_004624791:15,289,348...15,315,848
JBrowse link
G Fbn1 fibrillin 1 ISO mRNA, protein:increased expression:renal glomerulus (rat)
mRNA:increased expression:renal cortex, renal glomerulus (rat)
RGD PMID:16282705 PMID:16395273 RGD:7365077 RGD:7387262 NCBI chrNW_004624731:11,086,240...11,318,111
Ensembl chrNW_004624731:11,086,844...11,318,102
JBrowse link
G Fcgr2b Fc fragment of IgG receptor IIb ISO RGD PMID:19640933 RGD:5508403 NCBI chrNW_004624826:97,605...112,101 JBrowse link
G Fcgr3a Fc fragment of IgG receptor IIIa ISO RGD PMID:19050295 RGD:5508439 NCBI chrNW_004624826:51,387...59,117 JBrowse link
G Fn1 fibronectin 1 disease_progression ISO RGD PMID:20484935 RGD:7206839 NCBI chrNW_004624765:707,872...775,056
Ensembl chrNW_004624765:707,755...775,056
JBrowse link
G Fos Fos proto-oncogene, AP-1 transcription factor subunit treatment ISO RGD PMID:11880336 PMID:31821871 RGD:405650596 RGD:7242278 NCBI chrNW_004624734:26,424,053...26,427,431
Ensembl chrNW_004624734:26,423,079...26,427,732
JBrowse link
G Gas6 growth arrest specific 6 ISO RGD PMID:11290560 RGD:1579882 NCBI chrNW_004624793:385,846...410,934
Ensembl chrNW_004624793:385,812...410,934
JBrowse link
G Gdnf glial cell derived neurotrophic factor treatment ISO RGD PMID:22105543 RGD:405866361 NCBI chrNW_004624759:17,263,570...17,290,046
Ensembl chrNW_004624759:17,263,969...17,287,723
JBrowse link
G Gja5 gap junction protein alpha 5 ISO RGD PMID:22945766 RGD:7207390 NCBI chrNW_004624772:16,810,723...16,828,328
Ensembl chrNW_004624772:16,813,011...16,814,084
JBrowse link
G Ifng interferon gamma ISO CTD Direct Evidence: marker/mechanism
associated with kidney transplantation;mRNA:increased expression:kidney
CTD
RGD
PMID:1825860 PMID:21546865 PMID:22495297 RGD:6893377 RGD:6893462 NCBI chrNW_004624802:163,261...166,534
Ensembl chrNW_004624802:163,261...166,534
JBrowse link
G Il10 interleukin 10 ISO CTD Direct Evidence: marker/mechanism CTD PMID:10910440 NCBI chrNW_004624807:4,687,249...4,691,658
Ensembl chrNW_004624807:4,687,176...4,691,732
JBrowse link
G Il18 interleukin 18 ISO CTD Direct Evidence: therapeutic CTD PMID:18462998 NCBI chrNW_004624784:7,294,286...7,312,959
Ensembl chrNW_004624784:7,294,183...7,304,687
JBrowse link
G Il1a interleukin 1 alpha ISO associated with Malaria RGD PMID:10469263 RGD:6907108 NCBI chrNW_004624749:12,795,967...12,805,658
Ensembl chrNW_004624749:12,795,946...12,805,154
JBrowse link
G Il1b interleukin 1 beta ISO CTD Direct Evidence: marker/mechanism CTD PMID:9403216 PMID:10910440 NCBI chrNW_004624749:12,852,128...12,858,478
Ensembl chrNW_004624749:12,852,021...12,858,760
JBrowse link
G Il1r1 interleukin 1 receptor type 1 ISO RGD PMID:17500042 RGD:7207036 NCBI chrNW_004624749:6,661,142...6,737,988
Ensembl chrNW_004624749:6,708,522...6,739,871
JBrowse link
G Il1rn interleukin 1 receptor antagonist ISO mouse model treated with human protein
mRNA:increased expression:kidney (mouse)
RGD PMID:21304992 PMID:22241891 RGD:6906885 RGD:6906960 NCBI chrNW_004624749:13,210,365...13,224,471
Ensembl chrNW_004624749:13,210,476...13,225,890
JBrowse link
G Il2 interleukin 2 ISO CTD Direct Evidence: marker/mechanism CTD PMID:9403216 PMID:10910440 NCBI chrNW_004624777:2,885,537...2,890,453
Ensembl chrNW_004624777:2,885,535...2,890,453
JBrowse link
G Il2ra interleukin 2 receptor subunit alpha ISO CTD Direct Evidence: marker/mechanism CTD PMID:10910440 NCBI chrNW_004624775:927,337...991,062
Ensembl chrNW_004624775:924,648...942,354
JBrowse link
G Il6 interleukin 6 ISO CTD Direct Evidence: marker/mechanism CTD PMID:9403216 NCBI chrNW_004624739:7,957,709...7,963,414
Ensembl chrNW_004624739:7,957,674...7,962,318
JBrowse link
G Inf2 inverted formin 2 ISO ClinVar Annotator: match by term: Glomerulonephritis ClinVar PMID:25741868 PMID:28492532 NCBI chrNW_004624734:555,188...577,930
Ensembl chrNW_004624734:558,043...567,837
JBrowse link
G Itga3 integrin subunit alpha 3 ISO protein:decreased expression:glomerulus (rat) RGD PMID:19662603 RGD:2325666 NCBI chrNW_004624795:6,062,438...6,092,556
Ensembl chrNW_004624795:6,062,290...6,092,557
JBrowse link
G Itgam integrin subunit alpha M ISO RGD PMID:19752320 RGD:6907051 NCBI chrNW_004624782:14,316,505...14,367,841
Ensembl chrNW_004624782:14,318,499...14,367,922
JBrowse link
G Itgb1 integrin subunit beta 1 ISO protein:decreased expression:glomerulus (rat) RGD PMID:19662603 RGD:2325666 NCBI chrNW_004624805:8,748,848...8,800,259
Ensembl chrNW_004624805:8,765,949...8,802,149
JBrowse link
G Itgb2 integrin subunit beta 2 ISO RGD PMID:15277234 PMID:19752320 RGD:6907051 RGD:6907066 NCBI chrNW_004624745:30,452,576...30,479,036
Ensembl chrNW_004624745:30,452,576...30,470,611
JBrowse link
G Itgb3 integrin subunit beta 3 ISO RGD PMID:8083378 PMID:11051455 RGD:6907411 RGD:6907420 NCBI chrNW_004624849:1,895,378...1,952,755
Ensembl chrNW_004624849:1,895,914...1,952,665
JBrowse link
G Jund JunD proto-oncogene, AP-1 transcription factor subunit ISO CTD Direct Evidence: marker/mechanism CTD PMID:18443593 NCBI chrNW_004624908:1,572,628...1,574,205
Ensembl chrNW_004624908:1,573,174...1,574,113
JBrowse link
G Klkb1 kallikrein B1 ISO protein:increased expression:plasma: RGD PMID:2173275 RGD:7327152 NCBI chrNW_004624769:17,066,055...17,088,587
Ensembl chrNW_004624769:17,067,342...17,087,408
JBrowse link
G Lamb2 laminin subunit beta 2 ISO ClinVar Annotator: match by term: Glomerulonephritis ClinVar PMID:25741868 PMID:28492532 NCBI chrNW_004624730:3,145,643...3,158,781
Ensembl chrNW_004624730:3,145,643...3,159,101
JBrowse link
G LOC101715199 neutrophil elastase ISO RGD PMID:19752320 RGD:6907051 NCBI chrNW_004624828:7,720,020...7,722,842 JBrowse link
G LOC101719398 serotransferrin severity ISO RGD PMID:22607047 RGD:7244194 NCBI chrNW_004624730:10,078,165...10,109,349 JBrowse link
G Ltbp1 latent transforming growth factor beta binding protein 1 ISO RGD PMID:16282705 RGD:7387262 NCBI chrNW_004624738:14,602,790...15,035,610
Ensembl chrNW_004624738:14,602,805...15,034,805
JBrowse link
G Ltc4s leukotriene C4 synthase ISO protein:altered activity:kidney, cortex (rat) RGD PMID:7827126 RGD:2316641 NCBI chrNW_004624733:42,668,963...42,673,385
Ensembl chrNW_004624733:42,670,632...42,672,846
JBrowse link
G Mapk1 mitogen-activated protein kinase 1 ISO RGD PMID:20203158 RGD:7243972 NCBI chrNW_004624747:1,296,062...1,389,674
Ensembl chrNW_004624747:1,296,221...1,389,757
JBrowse link
G Mmp3 matrix metallopeptidase 3 ISO RGD PMID:15034162 PMID:23224597 RGD:7241253 RGD:8694105 NCBI chrNW_004624878:39,282...47,386
Ensembl chrNW_004624878:39,358...47,075
JBrowse link
G Mpo myeloperoxidase disease_progression ISO RGD PMID:17267745 PMID:19238910 RGD:7174702 RGD:7174705 NCBI chrNW_004624871:121,026...131,433
Ensembl chrNW_004624871:121,026...131,323
JBrowse link
G Mthfr methylenetetrahydrofolate reductase ISO DNA:transition:cds:g.677C>T (human) RGD PMID:22111818 RGD:6893468 NCBI chrNW_004624818:1,184,736...1,202,708
Ensembl chrNW_004624818:1,187,869...1,199,168
JBrowse link
G Myh9 myosin heavy chain 9 ISO ClinVar Annotator: match by term: Glomerulonephritis ClinVar PMID:25741868 PMID:28492532 NCBI chrNW_004624752:11,327,881...11,414,037
Ensembl chrNW_004624752:11,327,877...11,413,669
JBrowse link
G Ngf nerve growth factor ISO protein:increased expression:serum
CTD Direct Evidence: marker/mechanism
RGD
CTD
PMID:19169037 PMID:24244623 RGD:7242783 NCBI chrNW_004624772:11,009,765...11,070,050
Ensembl chrNW_004624772:11,010,845...11,070,017
JBrowse link
G Nppa natriuretic peptide A ISO associated with Streptococcal Infections;protein:increased expression:plasma RGD PMID:12654066 RGD:7248663 NCBI chrNW_004624818:1,147,654...1,149,722
Ensembl chrNW_004624818:1,147,974...1,148,927
JBrowse link
G Parp1 poly(ADP-ribose) polymerase 1 severity ISO RGD PMID:19454727 RGD:5684011 NCBI chrNW_004624807:446,662...478,571
Ensembl chrNW_004624807:446,647...479,069
JBrowse link
G Pdgfb platelet derived growth factor subunit B treatment ISO RGD PMID:11316849 RGD:10449490 NCBI chrNW_004624752:9,072,471...9,088,289
Ensembl chrNW_004624752:9,072,512...9,088,593
JBrowse link
G Pdgfd platelet derived growth factor D ISO RGD PMID:21866094 RGD:9854633 NCBI chrNW_004624918:1,052,640...1,293,138
Ensembl chrNW_004624918:1,052,567...1,293,192
JBrowse link
G Pla2g7 phospholipase A2 group VII ISO RGD PMID:8730430 RGD:7248794 NCBI chrNW_004624754:13,905,084...13,932,366
Ensembl chrNW_004624754:13,904,797...13,931,670
JBrowse link
G Plce1 phospholipase C epsilon 1 ISO ClinVar Annotator: match by term: Glomerulonephritis ClinVar PMID:25741868 NCBI chrNW_004624737:5,309,157...5,699,384
Ensembl chrNW_004624737:5,343,570...5,695,284
JBrowse link
G Pomc proopiomelanocortin ISO CTD Direct Evidence: marker/mechanism CTD PMID:4368615 PMID:6300362 NCBI chrNW_004624738:7,442,223...7,448,513
Ensembl chrNW_004624738:7,442,292...7,445,020
JBrowse link
G Pparg peroxisome proliferator activated receptor gamma ISO CTD Direct Evidence: therapeutic CTD PMID:11318962 NCBI chrNW_004624956:84,673...207,176
Ensembl chrNW_004624956:83,842...149,481
JBrowse link
G Prf1 perforin 1 ISO RGD PMID:17622272 RGD:6482824 NCBI chrNW_004624754:4,679,451...4,681,627
Ensembl chrNW_004624754:4,679,521...4,681,627
JBrowse link
G Ptafr platelet activating factor receptor treatment ISO RGD PMID:1668710 RGD:10041057 NCBI chrNW_004624764:11,996,454...12,025,751
Ensembl chrNW_004624764:11,998,657...11,999,685
JBrowse link
G Ptk2b protein tyrosine kinase 2 beta ISO protein:increased expression:glomerulus RGD PMID:11774117 RGD:729912 NCBI chrNW_004624758:22,065,448...22,182,604
Ensembl chrNW_004624758:22,124,836...22,182,605
JBrowse link
G Scgb1a1 secretoglobin family 1A member 1 ISO recombinant human SCGB1A1 in "experimental crescentic glomerulonephritis" model (mice) RGD PMID:18558621 RGD:6903251 NCBI chrNW_004624926:1,029,120...1,030,250 JBrowse link
G Serpine1 serpin family E member 1 treatment ISO RGD PMID:12897205 RGD:13208810 NCBI chrNW_004624740:16,128,145...16,136,696
Ensembl chrNW_004624740:16,128,059...16,137,337
JBrowse link
G Smad1 SMAD family member 1 ISO protein:increased phosphorylation:glomerulus RGD PMID:15591053 RGD:1643235 NCBI chrNW_004624853:4,415,816...4,503,317
Ensembl chrNW_004624853:4,444,876...4,502,496
JBrowse link
G Spp1 secreted phosphoprotein 1 disease_progression ISO RGD PMID:20720406 RGD:6903272 NCBI chrNW_004624872:4,505,796...4,513,247
Ensembl chrNW_004624872:4,505,522...4,513,742
JBrowse link
G Tbxas1 thromboxane A synthase 1 ISO RGD PMID:10560941 RGD:1601461 NCBI chrNW_004624765:20,145,769...20,314,992
Ensembl chrNW_004624765:20,146,138...20,315,797
JBrowse link
G Tlr2 toll like receptor 2 ISO RGD PMID:16849506 RGD:7241071 NCBI chrNW_004624858:4,931,820...4,984,175
Ensembl chrNW_004624858:4,979,485...4,981,833
JBrowse link
G Tlr4 toll like receptor 4 ISO RGD PMID:16849506 PMID:20844472 RGD:4144104 RGD:7241071 NCBI chrNW_004624760:17,596,516...17,608,955
Ensembl chrNW_004624760:17,598,630...17,609,120
JBrowse link
G Tnf tumor necrosis factor ISO CTD Direct Evidence: marker/mechanism CTD PMID:9403216 PMID:10910440 NCBI chrNW_004624754:24,623,059...24,625,647
Ensembl chrNW_004624754:24,623,425...24,625,531
JBrowse link
G Tnfrsf1a TNF receptor superfamily member 1A disease_progression
treatment
ISO protein:increased expression:urine RGD PMID:20525973 PMID:23400706 RGD:7245516 RGD:7245540 NCBI chrNW_004624860:3,111,244...3,123,041
Ensembl chrNW_004624860:3,111,630...3,122,711
JBrowse link
G Tnfrsf1b TNF receptor superfamily member 1B treatment ISO RGD PMID:15841213 PMID:22449555 PMID:23400706 RGD:7245530 RGD:7245540 RGD:7245546 NCBI chrNW_004624818:894,470...922,806
Ensembl chrNW_004624818:896,150...922,710
JBrowse link
G Tpo thyroid peroxidase ISO RGD PMID:8393543 RGD:7207483 NCBI chrNW_004624846:1,934,084...1,962,637
Ensembl chrNW_004624846:1,934,469...1,961,291
JBrowse link
G Vcam1 vascular cell adhesion molecule 1 ISO protein:increased expression:kidney RGD PMID:18574676 RGD:7241215 NCBI chrNW_004624857:3,606,573...3,625,991
Ensembl chrNW_004624857:3,606,431...3,627,063
JBrowse link
G Vegfa vascular endothelial growth factor A treatment ISO RGD PMID:15195119 RGD:7421594 NCBI chrNW_004624754:15,929,414...15,943,637 JBrowse link
G Wt1 WT1 transcription factor ISO CTD Direct Evidence: marker/mechanism CTD PMID:20962747 NCBI chrNW_004624766:20,899,546...20,937,084
Ensembl chrNW_004624766:20,900,676...20,937,202
JBrowse link
anti-basement membrane glomerulonephritis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Agt angiotensinogen ISO protein:increased expression:kidney, urine
mRNA, protein:increased expression:liver, plasma
RGD PMID:7550093 PMID:21282555 RGD:11039051 RGD:5129185 NCBI chrNW_004624775:18,846,222...18,856,093
Ensembl chrNW_004624775:18,849,118...18,855,577
JBrowse link
G Agtr1 angiotensin II receptor type 1 ISO protein:increased expression:kidney RGD PMID:21282555 RGD:5129185 NCBI chrNW_004624730:25,964,848...26,006,468
Ensembl chrNW_004624730:25,964,811...26,006,463
JBrowse link
G Bax BCL2 associated X, apoptosis regulator ISO mRNA, protein:increased expression:kidney RGD PMID:12234300 RGD:1579984 NCBI chrNW_004624832:5,050,222...5,068,565
Ensembl chrNW_004624832:5,050,222...5,055,506
JBrowse link
G Bcl2 BCL2 apoptosis regulator ISO mRNA, protein:decreased expression:kidney RGD PMID:12234300 RGD:1579984 NCBI chrNW_004624792:8,854,345...9,032,727
Ensembl chrNW_004624792:8,859,522...9,031,344
JBrowse link
G Ccl17 C-C motif chemokine ligand 17 ISO mRNA:increased expression:glomerulus RGD PMID:20071465 RGD:4145614 NCBI chrNW_004624746:28,655,288...28,657,563
Ensembl chrNW_004624746:28,655,801...28,657,470
JBrowse link
G Ccl22 C-C motif chemokine ligand 22 ISO mRNA, protein:increased expression:glomerulus RGD PMID:12651599 RGD:2306306 NCBI chrNW_004624746:28,694,879...28,700,711
Ensembl chrNW_004624746:28,694,735...28,700,827
JBrowse link
G Ccl5 C-C motif chemokine ligand 5 ISO mRNA:increased expression:glomerulus RGD PMID:17898087 RGD:2307059 NCBI chrNW_004624875:3,334,136...3,342,085
Ensembl chrNW_004624875:3,334,078...3,341,614
JBrowse link
G Cd274 CD274 molecule treatment ISO RGD PMID:21965585 RGD:7248671 NCBI chrNW_004624736:9,991,851...10,017,047
Ensembl chrNW_004624736:9,996,156...10,013,814
JBrowse link
G Cd40 CD40 molecule ISO RGD PMID:15210767 RGD:7248442 NCBI chrNW_004624790:8,475,640...8,485,927
Ensembl chrNW_004624790:8,476,158...8,485,856
JBrowse link
G Cd40lg CD40 ligand ISO RGD PMID:15458437 RGD:5508170 NCBI chrNW_004624808:10,472,028...10,484,407
Ensembl chrNW_004624808:10,472,572...10,484,338
JBrowse link
G Cd80 CD80 molecule ISO RGD PMID:10712436 RGD:6902936 NCBI chrNW_004624731:28,630,540...28,655,297
Ensembl chrNW_004624731:28,630,446...28,651,994
JBrowse link
G Cfb complement factor B ISO RGD PMID:22492944 RGD:7242700 NCBI chrNW_004624754:24,310,344...24,316,482
Ensembl chrNW_004624754:24,310,247...24,317,366
JBrowse link
G Clu clusterin ISO protein:increased expression:urine RGD PMID:23791361 RGD:9068422 NCBI chrNW_004624758:22,431,331...22,444,185
Ensembl chrNW_004624758:22,426,918...22,444,357
JBrowse link
G Csf1 colony stimulating factor 1 treatment ISO RGD PMID:19242505 RGD:7257569 NCBI chrNW_004624772:5,663,374...5,705,965
Ensembl chrNW_004624772:5,663,070...5,707,753
JBrowse link
G Csf1r colony stimulating factor 1 receptor treatment
ameliorates
ISO RGD PMID:19242505 PMID:21519331 RGD:151665824 RGD:7257569 NCBI chrNW_004624774:9,363,156...9,391,939
Ensembl chrNW_004624774:9,363,908...9,391,986
JBrowse link
G Ctla4 cytotoxic T-lymphocyte associated protein 4 treatment ISO RGD PMID:8206086 PMID:10712436 RGD:11352257 RGD:6902936 NCBI chrNW_004624765:12,449,205...12,454,324
Ensembl chrNW_004624765:12,449,205...12,454,324
JBrowse link
G Cx3cl1 C-X3-C motif chemokine ligand 1 ISO mRNA, protein:increased expression:glomerulus RGD PMID:19590241 RGD:4891946 NCBI chrNW_004624746:28,677,956...28,688,638
Ensembl chrNW_004624746:28,677,709...28,689,122
JBrowse link
G Cx3cr1 C-X3-C motif chemokine receptor 1 ISO mRNA, protein:increased expression:glomerulus RGD PMID:19590241 RGD:4891946 NCBI chrNW_004624731:1,705,953...1,719,452
Ensembl chrNW_004624731:1,706,043...1,719,452
JBrowse link
G Cxcl12 C-X-C motif chemokine ligand 12 ISO mRNA:increased expression:glomerulus RGD PMID:17557270 RGD:2306579 NCBI chrNW_004624922:1,261,228...1,273,755
Ensembl chrNW_004624922:1,261,228...1,273,758
JBrowse link
G Fcgr3a Fc fragment of IgG receptor IIIa no_association ISO DNA:polymorphism:exon:(rs396991)(human)
DNA:cnv: :
RGD PMID:19640933 PMID:19946017 RGD:5508400 RGD:5508403 NCBI chrNW_004624826:51,387...59,117 JBrowse link
G Gp6 glycoprotein VI platelet ISO RGD PMID:20651232 RGD:7242710 NCBI chrNW_004624832:2,197,897...2,208,019 JBrowse link
G Il10 interleukin 10 treatment ISO RGD PMID:23826305 RGD:7365004 NCBI chrNW_004624807:4,687,249...4,691,658
Ensembl chrNW_004624807:4,687,176...4,691,732
JBrowse link
G Il17a interleukin 17A treatment ISO RGD PMID:23826305 RGD:7365004 NCBI chrNW_004624855:3,911,349...3,914,214
Ensembl chrNW_004624855:3,911,349...3,913,136
JBrowse link
G Il18 interleukin 18 ISO RGD PMID:22046355 RGD:6893447 NCBI chrNW_004624784:7,294,286...7,312,959
Ensembl chrNW_004624784:7,294,183...7,304,687
JBrowse link
G Il1b interleukin 1 beta ISO mRNA:increased expression:kidney (mouse)
mRNA, protein:increased expression:kidney
RGD PMID:9198037 PMID:22046355 RGD:6893447 RGD:7401232 NCBI chrNW_004624749:12,852,128...12,858,478
Ensembl chrNW_004624749:12,852,021...12,858,760
JBrowse link
G Il1rn interleukin 1 receptor antagonist ISO RGD PMID:20071465 RGD:4145614 NCBI chrNW_004624749:13,210,365...13,224,471
Ensembl chrNW_004624749:13,210,476...13,225,890
JBrowse link
G Il4 interleukin 4 ISO RGD PMID:9350645 PMID:17898087 RGD:2307059 RGD:2317673 NCBI chrNW_004624733:39,412,800...39,420,079 JBrowse link
G Itga4 integrin subunit alpha 4 treatment ISO RGD PMID:7679412 PMID:9032136 RGD:2308810 RGD:9698425 NCBI chrNW_004624844:3,264,794...3,353,355
Ensembl chrNW_004624844:3,265,110...3,354,087
JBrowse link
G LOC101697345 HLA class II histocompatibility antigen, DP beta 1 chain ISO RGD PMID:21569485 RGD:5147561 NCBI chrNW_004624754:23,661,031...23,672,549
Ensembl chrNW_004624754:23,658,339...23,672,663
JBrowse link
G Mapk14 mitogen-activated protein kinase 14 ISO RGD PMID:21894146 RGD:6218988 NCBI chrNW_004624754:21,528,121...21,598,064
Ensembl chrNW_004624754:21,527,333...21,597,733
JBrowse link
G Mapk8 mitogen-activated protein kinase 8 ISO RGD PMID:21894146 RGD:6218988 NCBI chrNW_004624928:1,442,216...1,494,275
Ensembl chrNW_004624928:1,439,146...1,494,266
JBrowse link
G Mif macrophage migration inhibitory factor ISO RGD PMID:10780884 RGD:1642011 NCBI chrNW_004624747:10,307,826...10,308,649
Ensembl chrNW_004624747:10,303,919...10,308,821
JBrowse link
G Mmp12 matrix metallopeptidase 12 ISO RGD PMID:21894146 RGD:6218988 NCBI chrNW_004624878:6,017...17,368
Ensembl chrNW_004624878:6,035...17,445
JBrowse link
G Mmp14 matrix metallopeptidase 14 ISO mRNA:increased expression:kidney, macrophage RGD PMID:10878552 RGD:2314954 NCBI chrNW_004624820:9,667,371...9,677,488
Ensembl chrNW_004624820:9,667,262...9,677,774
JBrowse link
G Nos2 nitric oxide synthase 2 ISO RGD PMID:21894146 RGD:6218988 NCBI chrNW_004624786:491,944...530,427
Ensembl chrNW_004624786:489,311...528,271
JBrowse link
G Nppb natriuretic peptide B ISO RGD PMID:11729234 RGD:7248605 NCBI chrNW_004624818:1,139,776...1,141,010 JBrowse link
G Pdcd1 programmed cell death 1 treatment ISO RGD PMID:21965585 RGD:7248671 NCBI chrNW_004624847:5,732,922...5,741,908
Ensembl chrNW_004624847:5,732,767...5,742,269
JBrowse link
G Ppara peroxisome proliferator activated receptor alpha ISO RGD PMID:17888025 RGD:5563035 NCBI chrNW_004624752:3,646,499...3,702,553
Ensembl chrNW_004624752:3,650,922...3,701,672
JBrowse link
G Ptk2b protein tyrosine kinase 2 beta ISO protein:increased expression:glomerulus RGD PMID:11774117 RGD:729912 NCBI chrNW_004624758:22,065,448...22,182,604
Ensembl chrNW_004624758:22,124,836...22,182,605
JBrowse link
G Rapgef1 Rap guanine nucleotide exchange factor 1 ISO protein:increased expression:renal glomerulus RGD PMID:18784646 RGD:11534983 NCBI chrNW_004624760:4,376,733...4,474,834
Ensembl chrNW_004624760:4,376,713...4,474,837
JBrowse link
G Selp selectin P ISO RGD PMID:21894146 RGD:6218988 NCBI chrNW_004624826:7,510,039...7,544,332
Ensembl chrNW_004624826:7,511,646...7,537,924
JBrowse link
G Slc34a1 solute carrier family 34 member 1 ISO protein:decreased expression:kidney, brush border membrane (mouse) RGD PMID:19193726 RGD:7242947 NCBI chrNW_004624733:12,685,544...12,699,908
Ensembl chrNW_004624733:12,685,546...12,699,901
JBrowse link
G Slit2 slit guidance ligand 2 ISO mRNA:decreased expression:kidney, glomerulus RGD PMID:15215188 RGD:2316132 NCBI chrNW_004624755:11,470,810...11,819,800
Ensembl chrNW_004624755:11,472,377...11,819,266
JBrowse link
G Spp1 secreted phosphoprotein 1 ISO RGD PMID:20504883 RGD:6903276 NCBI chrNW_004624872:4,505,796...4,513,247
Ensembl chrNW_004624872:4,505,522...4,513,742
JBrowse link
G Syk spleen associated tyrosine kinase ISO RGD PMID:21894146 RGD:6218988 NCBI chrNW_004624868:1,654,079...1,738,648
Ensembl chrNW_004624868:1,653,997...1,701,391
JBrowse link
G Tnf tumor necrosis factor ISO RGD PMID:21894146 RGD:6218988 NCBI chrNW_004624754:24,623,059...24,625,647
Ensembl chrNW_004624754:24,623,425...24,625,531
JBrowse link
G Vcam1 vascular cell adhesion molecule 1 ISO protein:increased expression:urine, serum: RGD PMID:23460853 RGD:7241232 NCBI chrNW_004624857:3,606,573...3,625,991
Ensembl chrNW_004624857:3,606,431...3,627,063
JBrowse link
C1q Deficiency term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G C1qa complement C1q A chain ISO ClinVar Annotator: match by term: C1Q deficiency ClinVar PMID:7594474 PMID:8840296 PMID:9225968 PMID:9590289 PMID:21654842 More... NCBI chrNW_004624764:7,363,615...7,366,408
Ensembl chrNW_004624764:7,363,567...7,366,617
JBrowse link
G C1qb complement C1q B chain ISO ClinVar Annotator: match by term: C1Q deficiency ClinVar PMID:17513176 PMID:21654842 PMID:25741868 PMID:28492532 NCBI chrNW_004624764:7,377,013...7,382,953
Ensembl chrNW_004624764:7,376,967...7,383,445
JBrowse link
G C1qc complement C1q C chain ISO ClinVar Annotator: match by term: C1Q deficiency ClinVar PMID:7029321 PMID:7900940 PMID:8630118 PMID:20635792 PMID:21654842 More... NCBI chrNW_004624764:7,369,365...7,373,238
Ensembl chrNW_004624764:7,369,338...7,373,436
JBrowse link
C1q Deficiency 1 term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G C1qa complement C1q A chain ISO ClinVar Annotator: match by term: C1Q deficiency 1 | ClinVar Annotator: match by term: C1QA-related condition OMIM
ClinVar
PMID:25741868 PMID:28492532 NCBI chrNW_004624764:7,363,615...7,366,408
Ensembl chrNW_004624764:7,363,567...7,366,617
JBrowse link
C1q Deficiency 2 term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G C1qb complement C1q B chain ISO ClinVar Annotator: match by term: C1Q deficiency 2 | ClinVar Annotator: match by term: C1QB-related condition OMIM
ClinVar
PMID:2894352 PMID:24160257 PMID:25741868 PMID:28492532 NCBI chrNW_004624764:7,377,013...7,382,953
Ensembl chrNW_004624764:7,376,967...7,383,445
JBrowse link
C1q Deficiency 3 term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G C1qc complement C1q C chain ISO ClinVar Annotator: match by term: C1Q deficiency 3 | ClinVar Annotator: match by term: C1QC-related condition ClinVar
OMIM
PMID:7029321 PMID:8630118 PMID:24157463 PMID:28492532 NCBI chrNW_004624764:7,369,365...7,373,238
Ensembl chrNW_004624764:7,369,338...7,373,436
JBrowse link
C3 Glomerulopathy 3 term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cfh complement factor H ISO ClinVar Annotator: match by term: C3 GLOMERULOPATHY 3 | ClinVar Annotator: match by term: CFH-Related Dense Deposit Disease / Membranoproliferative Glomerulonephritis Type II ClinVar PMID:8072530 PMID:9536098 PMID:11158219 PMID:11170895 PMID:11978762 More... NCBI chrNW_004624798:3,332,549...3,414,435 JBrowse link
Chronic Mesangial Proliferative Glomerulonephritis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cx3cl1 C-X3-C motif chemokine ligand 1 ISO RGD PMID:12028445 RGD:9491783 NCBI chrNW_004624746:28,677,956...28,688,638
Ensembl chrNW_004624746:28,677,709...28,689,122
JBrowse link
G Cx3cr1 C-X3-C motif chemokine receptor 1 ISO RGD PMID:12028445 RGD:9491783 NCBI chrNW_004624731:1,705,953...1,719,452
Ensembl chrNW_004624731:1,706,043...1,719,452
JBrowse link
crescentic glomerulonephritis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cd40 CD40 molecule ISO RGD PMID:14569091 RGD:7248599 NCBI chrNW_004624790:8,475,640...8,485,927
Ensembl chrNW_004624790:8,476,158...8,485,856
JBrowse link
G Cd40lg CD40 ligand treatment ISO RGD PMID:14569091 RGD:7248599 NCBI chrNW_004624808:10,472,028...10,484,407
Ensembl chrNW_004624808:10,472,572...10,484,338
JBrowse link
G Csf1r colony stimulating factor 1 receptor treatment ISO RGD PMID:23408165 RGD:151665815 NCBI chrNW_004624774:9,363,156...9,391,939
Ensembl chrNW_004624774:9,363,908...9,391,986
JBrowse link
G Fcgr2a Fc fragment of IgG receptor IIa ISO DNA:CNV:3'UTR: RGD PMID:16482158 RGD:2293335 NCBI chrNW_004624826:23,930...34,735 JBrowse link
G Il1b interleukin 1 beta ISO RGD PMID:19959716 RGD:7175502 NCBI chrNW_004624749:12,852,128...12,858,478
Ensembl chrNW_004624749:12,852,021...12,858,760
JBrowse link
G Il1rn interleukin 1 receptor antagonist treatment ISO human protein in a rat model RGD PMID:7637259 RGD:8551712 NCBI chrNW_004624749:13,210,365...13,224,471
Ensembl chrNW_004624749:13,210,476...13,225,890
JBrowse link
G Jund JunD proto-oncogene, AP-1 transcription factor subunit ISO RGD PMID:18443593 RGD:2293336 NCBI chrNW_004624908:1,572,628...1,574,205
Ensembl chrNW_004624908:1,573,174...1,574,113
JBrowse link
G Mmp12 matrix metallopeptidase 12 ISO RGD PMID:12626598 PMID:20488952 RGD:2325762 RGD:737630 NCBI chrNW_004624878:6,017...17,368
Ensembl chrNW_004624878:6,035...17,445
JBrowse link
G Mmp3 matrix metallopeptidase 3 ISO RGD PMID:11095647 RGD:7241255 NCBI chrNW_004624878:39,282...47,386
Ensembl chrNW_004624878:39,358...47,075
JBrowse link
G Mmp9 matrix metallopeptidase 9 ISO protein:increased expression:renal cortex (rat) RGD PMID:16046515 RGD:2313720 NCBI chrNW_004624790:8,584,399...8,591,763
Ensembl chrNW_004624790:8,583,457...8,591,713
JBrowse link
G Mtor mechanistic target of rapamycin kinase ISO RGD PMID:21403644 RGD:7245940 NCBI chrNW_004624818:1,570,155...1,698,264
Ensembl chrNW_004624818:1,570,276...1,698,259
JBrowse link
G Stat6 signal transducer and activator of transcription 6 ISO RGD PMID:21985369 RGD:7243976 NCBI chrNW_004624802:10,809,234...10,847,762
Ensembl chrNW_004624802:10,809,252...10,846,693
JBrowse link
focal segmental glomerulosclerosis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ace2 angiotensin converting enzyme 2 ISO CTD Direct Evidence: marker/mechanism CTD PMID:16723697 NCBI chrNW_004624829:344,823...391,451
Ensembl chrNW_004624829:344,933...391,527
JBrowse link
G Acta2 actin alpha 2, smooth muscle ISO CTD Direct Evidence: marker/mechanism CTD PMID:20493835 NCBI chrNW_004624791:15,243,074...15,259,362
Ensembl chrNW_004624791:15,242,432...15,259,508
JBrowse link
G Actn4 actinin alpha 4 susceptibility ISO ClinVar Annotator: match by term: Focal segmental glomerulosclerosis | ClinVar Annotator: match by term: Glomerulosclerosis, focal RGD
ClinVar
PMID:10700177 PMID:16251236 PMID:18594871 PMID:19142020 PMID:19956976 More... RGD:1598731 NCBI chrNW_004624794:12,042,627...12,113,762
Ensembl chrNW_004624794:12,042,533...12,113,886
JBrowse link
G Actr3 actin related protein 3 ISO DNA:missense mutation:cds:p.L111F (rat)
protein:increased expression:renal glomerulus (rat)
RGD PMID:18064521 PMID:27251563 RGD:11575049 RGD:2292230 NCBI chrNW_004624732:31,360,804...31,427,885
Ensembl chrNW_004624732:31,361,147...31,427,811
JBrowse link
G Agt angiotensinogen ISO CTD Direct Evidence: marker/mechanism RGD
CTD
PMID:19858406 PMID:21357516 RGD:5129175 NCBI chrNW_004624775:18,846,222...18,856,093
Ensembl chrNW_004624775:18,849,118...18,855,577
JBrowse link
G Agtr1 angiotensin II receptor type 1 ISO protein:increased expression:kidney cortex RGD PMID:21357516 RGD:5129175 NCBI chrNW_004624730:25,964,848...26,006,468
Ensembl chrNW_004624730:25,964,811...26,006,463
JBrowse link
G Agtr2 angiotensin II receptor type 2 ISO protein:increased expression:kidney cortex RGD PMID:21357516 RGD:5129175 NCBI chrNW_004624967:327,627...332,000
Ensembl chrNW_004624967:329,284...330,372
JBrowse link
G Angpt2 angiopoietin 2 ISO mRNA, protein:increased expression:glomerulus (rat) RGD PMID:16628643 RGD:2314213 NCBI chrNW_004624861:4,457,519...4,510,035
Ensembl chrNW_004624861:4,457,158...4,509,623
JBrowse link
G Anln anillin actin binding protein ISO CTD Direct Evidence: marker/mechanism CTD NCBI chrNW_004624740:24,756,633...24,831,168
Ensembl chrNW_004624740:24,756,234...24,830,978
JBrowse link
G Arhgap24 Rho GTPase activating protein 24 ISO ClinVar Annotator: match by term: Focal segmental glomerulosclerosis ClinVar NCBI chrNW_004624872:1,950,058...2,442,532
Ensembl chrNW_004624872:2,036,937...2,442,603
JBrowse link
G Axdnd1 axonemal dynein light chain domain containing 1 ISO ClinVar Annotator: match by term: Focal segmental glomerulosclerosis | ClinVar Annotator: match by term: Glomerulosclerosis, focal ClinVar PMID:8589695 PMID:10742096 PMID:11805166 PMID:15253708 PMID:15327385 More... NCBI chrNW_004624771:2,824,853...2,985,997 JBrowse link
G Bdkrb1 bradykinin receptor B1 ISO RGD PMID:21412216 RGD:7175321 NCBI chrNW_004624734:8,545,707...8,549,846
Ensembl chrNW_004624734:8,548,356...8,549,414
JBrowse link
G C2 complement C2 ISO ClinVar Annotator: match by term: Focal segmental glomerulosclerosis ClinVar PMID:2249879 PMID:6308626 PMID:8181962 PMID:16518403 PMID:16936732 More... NCBI chrNW_004624754:24,316,778...24,327,065
Ensembl chrNW_004624754:24,317,058...24,322,656
JBrowse link
G C3 complement C3 ISO ClinVar Annotator: match by term: Focal segmental glomerulosclerosis ClinVar PMID:1976733 PMID:7870343 PMID:16687714 PMID:17634448 PMID:17767156 More... NCBI chrNW_004624828:3,773,816...3,798,077
Ensembl chrNW_004624828:3,770,221...3,797,946
JBrowse link
G Casp9 caspase 9 treatment ISO RGD PMID:28245472 RGD:13782344 NCBI chrNW_004624764:1,769,270...1,789,399
Ensembl chrNW_004624764:1,773,455...1,789,423
JBrowse link
G Cat catalase ISO RGD PMID:22443450 RGD:7205647 NCBI chrNW_004624767:12,680,940...12,715,468
Ensembl chrNW_004624767:12,680,953...12,715,739
JBrowse link
G Ccn2 cellular communication network factor 2 ISO CTD Direct Evidence: marker/mechanism CTD PMID:17121042 NCBI chrNW_004624753:6,022,033...6,024,866
Ensembl chrNW_004624753:6,023,069...6,024,833
JBrowse link
G Cd2ap CD2 associated protein ISO ClinVar Annotator: match by term: Focal segmental glomerulosclerosis ClinVar PMID:25741868 PMID:28492532 NCBI chrNW_004624754:13,420,594...13,511,672
Ensembl chrNW_004624754:13,420,603...13,511,523
JBrowse link
G Cfb complement factor B ISO ClinVar Annotator: match by term: Focal segmental glomerulosclerosis ClinVar PMID:2249879 PMID:6308626 PMID:8181962 PMID:16518403 PMID:16936732 More... NCBI chrNW_004624754:24,310,344...24,316,482
Ensembl chrNW_004624754:24,310,247...24,317,366
JBrowse link
G Cfh complement factor H ISO ClinVar Annotator: match by term: Focal segmental glomerulosclerosis ClinVar PMID:8072530 PMID:15870199 PMID:16299065 PMID:17089378 PMID:17947292 More... NCBI chrNW_004624798:3,332,549...3,414,435 JBrowse link
G Cfi complement factor I ISO ClinVar Annotator: match by term: Focal segmental glomerulosclerosis ClinVar PMID:18825487 PMID:25741868 PMID:28492532 NCBI chrNW_004624830:111,123...151,668
Ensembl chrNW_004624830:111,004...151,514
JBrowse link
G Cmas cytidine monophosphate N-acetylneuraminic acid synthetase ISO MouseDO NCBI chrNW_004624752:16,712,878...16,731,937
Ensembl chrNW_004624752:16,712,660...16,732,399
JBrowse link
G Col4a1 collagen type IV alpha 1 chain ISO CTD Direct Evidence: marker/mechanism CTD PMID:16191423 PMID:18682491 NCBI chrNW_004624793:2,325,104...2,426,814
Ensembl chrNW_004624793:2,325,128...2,426,817
JBrowse link
G Col4a3 collagen type IV alpha 3 chain ISO ClinVar Annotator: match by term: Focal segmental glomerulosclerosis ClinVar PMID:14871398 PMID:17216251 PMID:18385178 PMID:24033266 PMID:24854265 More... NCBI chrNW_004624843:1,557,756...1,623,936 JBrowse link
G Col4a4 collagen type IV alpha 4 chain ISO ClinVar Annotator: match by term: Focal segmental glomerulosclerosis ClinVar PMID:12028435 PMID:15618242 PMID:17396119 PMID:19129241 PMID:20029656 More... NCBI chrNW_004624843:1,364,674...1,486,813
Ensembl chrNW_004624843:1,364,674...1,486,250
JBrowse link
G Col4a5 collagen type IV alpha 5 chain ISO ClinVar Annotator: match by term: Focal segmental glomerulosclerosis ClinVar PMID:8648925 PMID:9195222 PMID:10561141 PMID:10752524 PMID:14514738 More... NCBI chrNW_004624803:7,509,877...7,916,365
Ensembl chrNW_004624803:7,511,041...7,916,031
JBrowse link
G Coq2 coenzyme Q2, polyprenyltransferase ISO ClinVar Annotator: match by term: Focal segmental glomerulosclerosis ClinVar PMID:24033266 PMID:25741868 PMID:28492532 NCBI chrNW_004624900:272,440...288,090
Ensembl chrNW_004624900:272,404...288,675
JBrowse link
G Coq8b coenzyme Q8B ISO ClinVar Annotator: match by term: Focal segmental glomerulosclerosis ClinVar PMID:25741868 PMID:32543055 NCBI chrNW_004624925:623,656...655,940
Ensembl chrNW_004624925:622,811...655,948
JBrowse link
G Crb2 crumbs cell polarity complex component 2 ISO CTD Direct Evidence: marker/mechanism CTD NCBI chrNW_004624760:11,576,683...11,598,354
Ensembl chrNW_004624760:11,579,163...11,598,287
JBrowse link
G Cubn cubilin ISO ClinVar Annotator: match by term: Glomerulosclerosis, focal ClinVar PMID:25741868 PMID:28492532 NCBI chrNW_004624796:10,728,853...10,987,292
Ensembl chrNW_004624796:10,728,983...10,988,361
JBrowse link
G Edn1 endothelin 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:16191423 NCBI chrNW_004624756:13,842,482...13,849,003
Ensembl chrNW_004624756:13,842,164...13,849,029
JBrowse link
G Eya1 EYA transcriptional coactivator and phosphatase 1 ISO ClinVar Annotator: match by term: Glomerulosclerosis, focal ClinVar PMID:10991693 PMID:24033266 PMID:25741868 PMID:31049720 NCBI chrNW_004624744:19,782,174...19,975,496
Ensembl chrNW_004624744:19,782,790...19,977,335
JBrowse link
G Fn1 fibronectin 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:16191423 NCBI chrNW_004624765:707,872...775,056
Ensembl chrNW_004624765:707,755...775,056
JBrowse link
G Gnaq G protein subunit alpha q ISO CTD Direct Evidence: marker/mechanism CTD PMID:16267159 NCBI chrNW_004624811:5,158,665...5,485,812
Ensembl chrNW_004624811:5,163,793...5,486,140
JBrowse link
G Havcr1 hepatitis A virus cellular receptor 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:19225054 NCBI chrNW_004624733:32,284,793...32,310,980 JBrowse link
G Hr HR lysine demethylase and nuclear receptor corepressor ISO RGD PMID:21325752 RGD:150520024 NCBI chrNW_004624758:17,699,357...17,719,188
Ensembl chrNW_004624758:17,699,400...17,715,482
JBrowse link
G Hspb1 heat shock protein family B (small) member 1 ISO protein:increased expression:glomerulus, podocyte: RGD PMID:21931298 RGD:10402764 NCBI chrNW_004624740:14,940,161...14,941,561
Ensembl chrNW_004624740:14,939,445...14,941,819
JBrowse link
G Il1b interleukin 1 beta ISO RGD PMID:21412216 RGD:7175321 NCBI chrNW_004624749:12,852,128...12,858,478
Ensembl chrNW_004624749:12,852,021...12,858,760
JBrowse link
G Inf2 inverted formin 2 ISO ClinVar Annotator: match by term: Focal segmental glomerulosclerosis | ClinVar Annotator: match by term: Glomerulosclerosis, focal ClinVar PMID:21866090 PMID:25741868 PMID:26467025 PMID:28492532 PMID:30655312 More... NCBI chrNW_004624734:555,188...577,930
Ensembl chrNW_004624734:558,043...567,837
JBrowse link
G Itgb3 integrin subunit beta 3 ISO RGD PMID:21804539 RGD:6907385 NCBI chrNW_004624849:1,895,378...1,952,755
Ensembl chrNW_004624849:1,895,914...1,952,665
JBrowse link
G Itgb4 integrin subunit beta 4 ISO ClinVar Annotator: match by term: Focal segmental glomerulosclerosis ClinVar PMID:25741868 NCBI chrNW_004624801:5,613,752...5,646,046
Ensembl chrNW_004624801:5,613,861...5,650,214
JBrowse link
G Kirrel2 kirre like nephrin family adhesion molecule 2 ISO ClinVar Annotator: match by term: Focal segmental glomerulosclerosis | ClinVar Annotator: match by term: Glomerulosclerosis, focal ClinVar PMID:19406966 PMID:25741868 PMID:26467025 PMID:28492532 NCBI chrNW_004624794:10,138,586...10,148,506
Ensembl chrNW_004624794:10,139,423...10,148,516
JBrowse link
G Lamb2 laminin subunit beta 2 ISO ClinVar Annotator: match by term: Focal segmental glomerulosclerosis | ClinVar Annotator: match by term: Glomerulosclerosis, focal ClinVar PMID:20556798 PMID:25741868 PMID:26467025 PMID:28492532 NCBI chrNW_004624730:3,145,643...3,158,781
Ensembl chrNW_004624730:3,145,643...3,159,101
JBrowse link
G Lipc lipase C, hepatic type ISO protein:reduced expression:serum (rat) RGD PMID:14531811 RGD:2308781 NCBI chrNW_004624781:13,342,469...13,468,120
Ensembl chrNW_004624781:13,342,357...13,455,055
JBrowse link
G Lmx1b LIM homeobox transcription factor 1 beta ISO ClinVar Annotator: match by term: Focal segmental glomerulosclerosis ClinVar PMID:25741868 PMID:28492532 NCBI chrNW_004624760:8,701,204...8,772,147
Ensembl chrNW_004624760:8,698,139...8,772,147
JBrowse link
G Lpl lipoprotein lipase ISO RGD PMID:14531811 RGD:2308781 NCBI chrNW_004624758:15,652,553...15,680,107
Ensembl chrNW_004624758:15,651,992...15,680,762
JBrowse link
G Med28 mediator complex subunit 28 ISO ClinVar Annotator: match by term: Focal segmental glomerulosclerosis ClinVar PMID:25741868 NCBI chrNW_004624755:14,225,597...14,236,814
Ensembl chrNW_004624755:14,227,819...14,236,775
JBrowse link
G Mmp2 matrix metallopeptidase 2 ISO mRNA, protein:increased expression, increased activity:kidney RGD PMID:19357873 RGD:2325738 NCBI chrNW_004624757:1,450,680...1,479,160
Ensembl chrNW_004624757:1,448,698...1,479,255
JBrowse link
G Mmp9 matrix metallopeptidase 9 ISO mRNA, protein:increased expression, increased activity:kidney RGD PMID:19357873 RGD:2325738 NCBI chrNW_004624790:8,584,399...8,591,763
Ensembl chrNW_004624790:8,583,457...8,591,713
JBrowse link
G Mpv17 mitochondrial inner membrane protein MPV17 ISO CTD Direct Evidence: marker/mechanism CTD PMID:18818194 NCBI chrNW_004624738:9,395,315...9,411,904
Ensembl chrNW_004624738:9,395,416...9,407,223
JBrowse link
G Myh10 myosin heavy chain 10 ISO CTD Direct Evidence: marker/mechanism CTD PMID:9678433 NCBI chrNW_004624786:11,039,436...11,190,935
Ensembl chrNW_004624786:11,040,951...11,185,627
JBrowse link
G Myh9 myosin heavy chain 9 ISO ClinVar Annotator: match by term: Focal segmental glomerulosclerosis ClinVar PMID:19557653 PMID:23144074 PMID:24033266 PMID:25741868 PMID:26346198 More... NCBI chrNW_004624752:11,327,881...11,414,037
Ensembl chrNW_004624752:11,327,877...11,413,669
JBrowse link
G Myo1e myosin IE ISO CTD Direct Evidence: marker/mechanism CTD NCBI chrNW_004624781:12,682,614...12,866,990
Ensembl chrNW_004624781:12,682,514...12,871,099
JBrowse link
G Myo9a myosin IXA ISO ClinVar Annotator: match by term: Focal segmental glomerulosclerosis | ClinVar Annotator: match by term: Glomerulosclerosis, focal ClinVar PMID:25741868 PMID:33412162 NCBI chrNW_004624781:1,900,669...2,179,269
Ensembl chrNW_004624781:1,967,671...2,175,150
JBrowse link
G Nlrp3 NLR family pyrin domain containing 3 ISO ClinVar Annotator: match by term: Focal segmental glomerulosclerosis ClinVar PMID:17509468 PMID:18263599 PMID:18311798 PMID:19319132 PMID:20182451 More... NCBI chrNW_004624937:564,191...584,470 JBrowse link
G Noc3l NOC3 like DNA replication regulator ISO ClinVar Annotator: match by term: Focal segmental glomerulosclerosis ClinVar PMID:25741868 NCBI chrNW_004624737:5,692,010...5,740,747
Ensembl chrNW_004624737:5,709,710...5,740,598
JBrowse link
G Nos2 nitric oxide synthase 2 ISO CTD Direct Evidence: marker/mechanism CTD PMID:16191423 NCBI chrNW_004624786:491,944...530,427
Ensembl chrNW_004624786:489,311...528,271
JBrowse link
G Nphp1 nephrocystin 1 ISO ClinVar Annotator: match by term: Focal segmental glomerulosclerosis ClinVar PMID:25741868 PMID:28492532 NCBI chrNW_004624749:1,725,515...1,779,787
Ensembl chrNW_004624749:1,725,598...1,779,344
JBrowse link
G Nphp3 nephrocystin 3 ISO ClinVar Annotator: match by term: Glomerulosclerosis, focal ClinVar PMID:25741868 PMID:28492532 NCBI chrNW_004624730:8,824,370...8,874,614
Ensembl chrNW_004624730:8,816,643...8,874,649
JBrowse link
G Nphp4 nephrocystin 4 ISO ClinVar Annotator: match by term: Focal segmental glomerulosclerosis ClinVar PMID:25741868 PMID:28492532 NCBI chrNW_004624818:5,325,946...5,432,290
Ensembl chrNW_004624818:5,327,038...5,432,901
JBrowse link
G Nphs1 NPHS1 adhesion molecule, nephrin disease_progression ISO protein:decreased expression:kidney,renal glomerulus (human)
mRNA:increased expression:urine (human)
RGD PMID:21414970 PMID:30900988 RGD:15023481 RGD:38549367 NCBI chrNW_004624794:10,117,464...10,138,511
Ensembl chrNW_004624794:10,116,777...10,135,963
JBrowse link
G Nphs2 NPHS2 stomatin family member, podocin ISO ClinVar Annotator: match by term: Focal segmental glomerulosclerosis | ClinVar Annotator: match by term: Glomerulosclerosis, focal ClinVar PMID:1523708 PMID:8589695 PMID:10742096 PMID:11805166 PMID:11805168 More... NCBI chrNW_004624771:2,828,758...2,847,995
Ensembl chrNW_004624771:2,828,104...2,849,254
JBrowse link
G Nup93 nucleoporin 93 ISO ClinVar Annotator: match by term: Focal segmental glomerulosclerosis ClinVar PMID:32581362 NCBI chrNW_004624746:29,153,503...29,271,518
Ensembl chrNW_004624746:29,153,503...29,253,146
JBrowse link
G Pax2 paired box 2 ISO ClinVar Annotator: match by term: Focal segmental glomerulosclerosis | ClinVar Annotator: match by term: Glomerulosclerosis, focal ClinVar PMID:3377002 PMID:8589702 PMID:9106533 PMID:11093271 PMID:11241473 More... NCBI chrNW_004624831:375,851...453,968
Ensembl chrNW_004624831:375,866...453,930
JBrowse link
G Pcna proliferating cell nuclear antigen ISO CTD Direct Evidence: marker/mechanism CTD PMID:17121042 NCBI chrNW_004624741:6,143,584...6,148,055
Ensembl chrNW_004624741:6,143,332...6,148,898
JBrowse link
G Pdss2 decaprenyl diphosphate synthase subunit 2 ISO ClinVar Annotator: match by term: Focal segmental glomerulosclerosis ClinVar PMID:25741868 PMID:28492532 NCBI chrNW_004624780:14,803,750...15,130,156
Ensembl chrNW_004624780:14,804,030...15,129,497
JBrowse link
G Pias1 protein inhibitor of activated STAT 1 ISO RGD PMID:19350281 RGD:8693412 NCBI chrNW_004624781:4,893,308...5,046,928
Ensembl chrNW_004624781:4,893,308...5,046,582
JBrowse link
G Plce1 phospholipase C epsilon 1 ISO ClinVar Annotator: match by term: Focal segmental glomerulosclerosis | ClinVar Annotator: match by term: Glomerulosclerosis, focal ClinVar PMID:18975016 PMID:20507940 PMID:25060053 PMID:25741868 PMID:26467025 More... NCBI chrNW_004624737:5,309,157...5,699,384
Ensembl chrNW_004624737:5,343,570...5,695,284
JBrowse link
G Pmm2 phosphomannomutase 2 ISO ClinVar Annotator: match by term: Glomerulosclerosis, focal ClinVar PMID:9140401 PMID:9497260 PMID:9781039 PMID:10386614 PMID:10527672 More... NCBI chrNW_004624824:6,214,193...6,244,590 JBrowse link
G Ppp3ca protein phosphatase 3 catalytic subunit alpha ISO RGD PMID:26436650 RGD:13515117 NCBI chrNW_004624830:6,318,352...6,584,232
Ensembl chrNW_004624830:6,317,968...6,581,892
JBrowse link
G Ppp3cb protein phosphatase 3 catalytic subunit beta ISO RGD PMID:26436650 RGD:13515117 NCBI chrNW_004624754:7,045,532...7,097,658
Ensembl chrNW_004624754:7,045,532...7,097,652
JBrowse link
G Psap prosaposin ISO ClinVar Annotator: match by term: Hyalinosis, Segmental Glomerular ClinVar PMID:24033266 PMID:25741868 PMID:28492532 PMID:30976395 PMID:35456468 NCBI chrNW_004624754:5,725,697...5,753,575
Ensembl chrNW_004624754:5,726,681...5,753,575
JBrowse link
G Rap1gap RAP1 GTPase activating protein ISO mRNA:increased expression:renal glomerulus (human) RGD PMID:24642466 RGD:9835343 NCBI chrNW_004624764:6,460,230...6,521,693
Ensembl chrNW_004624764:6,460,230...6,506,741
JBrowse link
G Reg1a regenerating family member 1 alpha ISO ClinVar Annotator: match by term: Focal segmental glomerulosclerosis ClinVar PMID:25741868 NCBI chrNW_004624749:23,993,755...23,995,923 JBrowse link
G Rpgrip1l RPGRIP1 like ISO ClinVar Annotator: match by term: Glomerulosclerosis, focal ClinVar PMID:19430481 PMID:20301500 PMID:25741868 PMID:28492532 NCBI chrNW_004624757:3,080,162...3,172,750
Ensembl chrNW_004624757:3,079,712...3,172,115
JBrowse link
G Scarb2 scavenger receptor class B member 2 ISO ClinVar Annotator: match by term: Focal segmental glomerulosclerosis | ClinVar Annotator: match by term: Glomerulosclerosis, focal ClinVar PMID:25088547 PMID:25741868 PMID:26467025 PMID:28492532 NCBI chrNW_004624757:14,709,120...14,795,039
Ensembl chrNW_004624757:14,709,120...14,795,243
JBrowse link
G Sdccag8 SHH signaling and ciliogenesis regulator SDCCAG8 ISO ClinVar Annotator: match by term: Focal segmental glomerulosclerosis | ClinVar Annotator: match by term: Glomerulosclerosis, focal ClinVar PMID:25741868 NCBI chrNW_004624771:15,898,172...16,116,013
Ensembl chrNW_004624771:15,896,661...16,115,375
JBrowse link
G Serpine1 serpin family E member 1 treatment ISO CTD Direct Evidence: marker/mechanism CTD
RGD
PMID:18682491 PMID:22303720 RGD:13208548 NCBI chrNW_004624740:16,128,145...16,136,696
Ensembl chrNW_004624740:16,128,059...16,137,337
JBrowse link
G Shh sonic hedgehog signaling molecule ISO RGD PMID:24744439 RGD:12859042 NCBI chrNW_004624800:2,202,986...2,215,309
Ensembl chrNW_004624800:2,203,393...2,212,068
JBrowse link
G Slc17a5 solute carrier family 17 member 5 ISO ClinVar Annotator: match by term: Glomerulosclerosis, focal ClinVar PMID:25741868 PMID:28492532 PMID:29140481 NCBI chrNW_004624819:766,332...816,255
Ensembl chrNW_004624819:767,340...815,903
JBrowse link
G Smarcal1 SNF2 related chromatin remodeling annealing helicase 1 ISO ClinVar Annotator: match by term: Focal segmental glomerulosclerosis | ClinVar Annotator: match by term: Glomerulosclerosis, focal ClinVar PMID:11799392 PMID:15880370 PMID:16840568 PMID:17089404 PMID:18805831 More... NCBI chrNW_004624823:8,645,340...8,708,039
Ensembl chrNW_004624823:8,644,826...8,706,591
JBrowse link
G Spp1 secreted phosphoprotein 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:9294829 NCBI chrNW_004624872:4,505,796...4,513,247
Ensembl chrNW_004624872:4,505,522...4,513,742
JBrowse link
G Srgap1 SLIT-ROBO Rho GTPase activating protein 1 ISO MouseDO NCBI chrNW_004624802:4,164,969...4,472,491
Ensembl chrNW_004624802:4,165,054...4,472,293
JBrowse link
G Tgfb1 transforming growth factor beta 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:16191423 PMID:18682491 PMID:20493835 NCBI chrNW_004624907:162,567...175,696
Ensembl chrNW_004624907:161,569...176,605
JBrowse link
G Tmem63c transmembrane protein 63C ISO protein:decreased expression:kidney,renal glomerulus (human) RGD PMID:30900988 RGD:15023481 NCBI chrNW_004624734:24,649,895...24,745,693
Ensembl chrNW_004624734:24,648,563...24,714,507
JBrowse link
G Tnf tumor necrosis factor ISO protein:increased expression:serum RGD PMID:21221075 RGD:7245511 NCBI chrNW_004624754:24,623,059...24,625,647
Ensembl chrNW_004624754:24,623,425...24,625,531
JBrowse link
G Tnfaip2 TNF alpha induced protein 2 ISO MouseDO NCBI chrNW_004624734:1,563,274...1,575,884
Ensembl chrNW_004624734:1,563,176...1,572,848
JBrowse link
G Tnfrsf1a TNF receptor superfamily member 1A ISO protein:increased expression:serum RGD PMID:21221075 RGD:7245511 NCBI chrNW_004624860:3,111,244...3,123,041
Ensembl chrNW_004624860:3,111,630...3,122,711
JBrowse link
G Tnfrsf1b TNF receptor superfamily member 1B ISO protein:increased expression:serum RGD PMID:21221075 RGD:7245511 NCBI chrNW_004624818:894,470...922,806
Ensembl chrNW_004624818:896,150...922,710
JBrowse link
G Trpc6 transient receptor potential cation channel subfamily C member 6 treatment ISO DNA:SNP:exon:p.P15S (human)
ClinVar Annotator: match by term: Focal segmental glomerulosclerosis | ClinVar Annotator: match by term: Glomerulosclerosis, focal
RGD
ClinVar
PMID:19936226 PMID:21839714 PMID:22980509 PMID:23385000 PMID:25019165 More... RGD:7247440 RGD:7247444 RGD:7247445 NCBI chrNW_004624878:1,321,022...1,469,964
Ensembl chrNW_004624878:1,321,497...1,468,865
JBrowse link
G Vldlr very low density lipoprotein receptor ISO protein:decreased expression:adipose tissue, skeletal muscle (rat) RGD PMID:11786096 RGD:2324671 NCBI chrNW_004624736:7,280,478...7,316,897
Ensembl chrNW_004624736:7,280,490...7,316,946
JBrowse link
G Vwf von Willebrand factor ISO RGD PMID:22295953 RGD:7207031 NCBI chrNW_004624860:2,843,268...2,973,888
Ensembl chrNW_004624860:2,858,088...2,973,052
JBrowse link
G Wt1 WT1 transcription factor ISO ClinVar Annotator: match by term: Focal segmental glomerulosclerosis ClinVar PMID:7795587 PMID:8388765 PMID:9108089 PMID:9531607 PMID:10571943 More... NCBI chrNW_004624766:20,899,546...20,937,084
Ensembl chrNW_004624766:20,900,676...20,937,202
JBrowse link
G Zmpste24 zinc metallopeptidase STE24 ISO CTD Direct Evidence: marker/mechanism CTD PMID:17152860 NCBI chrNW_004624764:22,723,643...22,777,517
Ensembl chrNW_004624764:22,723,291...22,778,761
JBrowse link
focal segmental glomerulosclerosis 1 term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ace angiotensin I converting enzyme treatment ISO RGD PMID:8505110 RGD:12880006 NCBI chrNW_004624849:998,262...1,019,305
Ensembl chrNW_004624849:998,277...1,019,521
JBrowse link
G Actn4 actinin alpha 4 ISO ClinVar Annotator: match by term: ACTN4-related condition | ClinVar Annotator: match by term: Focal sclerosis with hyalinosis | ClinVar Annotator: match by term: Focal segmental glomerulosclerosis 1 OMIM
ClinVar
PMID:9536098 PMID:10700177 PMID:16251236 PMID:17576681 PMID:18594871 More... NCBI chrNW_004624794:12,042,627...12,113,762
Ensembl chrNW_004624794:12,042,533...12,113,886
JBrowse link
G Arhgap24 Rho GTPase activating protein 24 ISO ClinVar Annotator: match by term: Focal segmental glomerulosclerosis 1 ClinVar NCBI chrNW_004624872:1,950,058...2,442,532
Ensembl chrNW_004624872:2,036,937...2,442,603
JBrowse link
G Axdnd1 axonemal dynein light chain domain containing 1 ISO ClinVar Annotator: match by term: Focal sclerosis with hyalinosis ClinVar PMID:8589695 PMID:10742096 PMID:11805166 PMID:15253708 PMID:15327385 More... NCBI chrNW_004624771:2,824,853...2,985,997 JBrowse link
G C2 complement C2 ISO ClinVar Annotator: match by term: Focal sclerosis with hyalinosis ClinVar PMID:2249879 PMID:6308626 PMID:8181962 PMID:16518403 PMID:16936732 More... NCBI chrNW_004624754:24,316,778...24,327,065
Ensembl chrNW_004624754:24,317,058...24,322,656
JBrowse link
G C3 complement C3 ISO ClinVar Annotator: match by term: Focal sclerosis with hyalinosis ClinVar PMID:1976733 PMID:17634448 PMID:18325906 PMID:19168221 PMID:25741868 More... NCBI chrNW_004624828:3,773,816...3,798,077
Ensembl chrNW_004624828:3,770,221...3,797,946
JBrowse link
G Cd2ap CD2 associated protein ISO ClinVar Annotator: match by term: Focal sclerosis with hyalinosis ClinVar PMID:25741868 NCBI chrNW_004624754:13,420,594...13,511,672
Ensembl chrNW_004624754:13,420,603...13,511,523
JBrowse link
G Cfb complement factor B ISO ClinVar Annotator: match by term: Focal sclerosis with hyalinosis ClinVar PMID:2249879 PMID:6308626 PMID:8181962 PMID:16518403 PMID:16936732 More... NCBI chrNW_004624754:24,310,344...24,316,482
Ensembl chrNW_004624754:24,310,247...24,317,366
JBrowse link
G Cfi complement factor I ISO ClinVar Annotator: match by term: Focal sclerosis with hyalinosis ClinVar PMID:18825487 PMID:25741868 PMID:28492532 NCBI chrNW_004624830:111,123...151,668
Ensembl chrNW_004624830:111,004...151,514
JBrowse link
G Col4a4 collagen type IV alpha 4 chain ISO ClinVar Annotator: match by term: Focal sclerosis with hyalinosis ClinVar PMID:19129241 PMID:21196518 PMID:24052634 PMID:24522496 PMID:24854265 More... NCBI chrNW_004624843:1,364,674...1,486,813
Ensembl chrNW_004624843:1,364,674...1,486,250
JBrowse link
G Cubn cubilin ISO ClinVar Annotator: match by term: Focal sclerosis with hyalinosis ClinVar PMID:25741868 PMID:28492532 NCBI chrNW_004624796:10,728,853...10,987,292
Ensembl chrNW_004624796:10,728,983...10,988,361
JBrowse link
G Eya1 EYA transcriptional coactivator and phosphatase 1 ISO ClinVar Annotator: match by term: Focal sclerosis with hyalinosis ClinVar PMID:10991693 PMID:24033266 PMID:25741868 PMID:31049720 NCBI chrNW_004624744:19,782,174...19,975,496
Ensembl chrNW_004624744:19,782,790...19,977,335
JBrowse link
G Inf2 inverted formin 2 ISO ClinVar Annotator: match by term: Focal sclerosis with hyalinosis ClinVar PMID:25741868 PMID:28492532 NCBI chrNW_004624734:555,188...577,930
Ensembl chrNW_004624734:558,043...567,837
JBrowse link
G Kirrel2 kirre like nephrin family adhesion molecule 2 ISO ClinVar Annotator: match by term: Focal sclerosis with hyalinosis ClinVar PMID:25741868 PMID:28492532 NCBI chrNW_004624794:10,138,586...10,148,506
Ensembl chrNW_004624794:10,139,423...10,148,516
JBrowse link
G Lamb2 laminin subunit beta 2 ISO ClinVar Annotator: match by term: Focal sclerosis with hyalinosis ClinVar PMID:20556798 PMID:25741868 PMID:26467025 PMID:28492532 NCBI chrNW_004624730:3,145,643...3,158,781
Ensembl chrNW_004624730:3,145,643...3,159,101
JBrowse link
G Myh9 myosin heavy chain 9 ISO ClinVar Annotator: match by term: Focal sclerosis with hyalinosis ClinVar PMID:19557653 PMID:23144074 PMID:24033266 PMID:25741868 PMID:26346198 More... NCBI chrNW_004624752:11,327,881...11,414,037
Ensembl chrNW_004624752:11,327,877...11,413,669
JBrowse link
G Myo9a myosin IXA ISO ClinVar Annotator: match by term: Focal sclerosis with hyalinosis ClinVar PMID:25741868 PMID:33412162 NCBI chrNW_004624781:1,900,669...2,179,269
Ensembl chrNW_004624781:1,967,671...2,175,150
JBrowse link
G Nlrp3 NLR family pyrin domain containing 3 ISO ClinVar Annotator: match by term: Focal sclerosis with hyalinosis ClinVar PMID:17509468 PMID:18263599 PMID:18311798 PMID:19319132 PMID:20182451 More... NCBI chrNW_004624937:564,191...584,470 JBrowse link
G Nphp3 nephrocystin 3 ISO ClinVar Annotator: match by term: Focal sclerosis with hyalinosis ClinVar PMID:25741868 PMID:28492532 NCBI chrNW_004624730:8,824,370...8,874,614
Ensembl chrNW_004624730:8,816,643...8,874,649
JBrowse link
G Nphs2 NPHS2 stomatin family member, podocin ISO ClinVar Annotator: match by term: Focal sclerosis with hyalinosis ClinVar PMID:8589695 PMID:10742096 PMID:11805166 PMID:11854170 PMID:12446471 More... NCBI chrNW_004624771:2,828,758...2,847,995
Ensembl chrNW_004624771:2,828,104...2,849,254
JBrowse link
G Nup107 nucleoporin 107 ISO ClinVar Annotator: match by term: Focal segmental glomerulosclerosis 1 ClinVar NCBI chrNW_004624948:556,054...604,381
Ensembl chrNW_004624948:556,127...601,540
JBrowse link
G Pax2 paired box 2 ISO ClinVar Annotator: match by term: Focal sclerosis with hyalinosis ClinVar PMID:3377002 PMID:8589702 PMID:9106533 PMID:11093271 PMID:11241473 More... NCBI chrNW_004624831:375,851...453,968
Ensembl chrNW_004624831:375,866...453,930
JBrowse link
G Plce1 phospholipase C epsilon 1 ISO ClinVar Annotator: match by term: Focal sclerosis with hyalinosis ClinVar PMID:25741868 PMID:26467025 PMID:28492532 NCBI chrNW_004624737:5,309,157...5,699,384
Ensembl chrNW_004624737:5,343,570...5,695,284
JBrowse link
G Pmm2 phosphomannomutase 2 ISO ClinVar Annotator: match by term: Focal sclerosis with hyalinosis ClinVar PMID:9140401 PMID:9497260 PMID:9781039 PMID:10386614 PMID:10527672 More... NCBI chrNW_004624824:6,214,193...6,244,590 JBrowse link
G Rpgrip1l RPGRIP1 like ISO ClinVar Annotator: match by term: Focal sclerosis with hyalinosis ClinVar PMID:19430481 PMID:20301500 PMID:25741868 PMID:28492532 NCBI chrNW_004624757:3,080,162...3,172,750
Ensembl chrNW_004624757:3,079,712...3,172,115
JBrowse link
G Scarb2 scavenger receptor class B member 2 ISO ClinVar Annotator: match by term: Focal sclerosis with hyalinosis ClinVar PMID:25741868 PMID:26467025 PMID:28492532 NCBI chrNW_004624757:14,709,120...14,795,039
Ensembl chrNW_004624757:14,709,120...14,795,243
JBrowse link
G Sdccag8 SHH signaling and ciliogenesis regulator SDCCAG8 ISO ClinVar Annotator: match by term: Focal sclerosis with hyalinosis ClinVar PMID:25741868 NCBI chrNW_004624771:15,898,172...16,116,013
Ensembl chrNW_004624771:15,896,661...16,115,375
JBrowse link
G Slc17a5 solute carrier family 17 member 5 ISO ClinVar Annotator: match by term: Focal sclerosis with hyalinosis ClinVar PMID:25741868 PMID:28492532 PMID:29140481 NCBI chrNW_004624819:766,332...816,255
Ensembl chrNW_004624819:767,340...815,903
JBrowse link
G Smarcal1 SNF2 related chromatin remodeling annealing helicase 1 ISO ClinVar Annotator: match by term: Focal sclerosis with hyalinosis ClinVar PMID:11799392 PMID:15880370 PMID:16840568 PMID:17089404 PMID:18805831 More... NCBI chrNW_004624823:8,645,340...8,708,039
Ensembl chrNW_004624823:8,644,826...8,706,591
JBrowse link
G Trpc6 transient receptor potential cation channel subfamily C member 6 ISO ClinVar Annotator: match by term: Focal sclerosis with hyalinosis ClinVar PMID:25741868 PMID:28492532 NCBI chrNW_004624878:1,321,022...1,469,964
Ensembl chrNW_004624878:1,321,497...1,468,865
JBrowse link
focal segmental glomerulosclerosis 2 term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Trpc6 transient receptor potential cation channel subfamily C member 6 ISO ClinVar Annotator: match by term: Focal segmental glomerulosclerosis 2 | ClinVar Annotator: match by term: TRPC6-related condition OMIM
ClinVar
PMID:2298509 PMID:10200986 PMID:15879175 PMID:15924139 PMID:16932363 More... NCBI chrNW_004624878:1,321,022...1,469,964
Ensembl chrNW_004624878:1,321,497...1,468,865
JBrowse link
focal segmental glomerulosclerosis 3 term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cd2ap CD2 associated protein ISO ClinVar Annotator: match by term: CD2AP-related condition | ClinVar Annotator: match by term: Focal segmental glomerulosclerosis 3, susceptibility to OMIM
ClinVar
PMID:10514378 PMID:12764198 PMID:17713465 PMID:18443213 PMID:19131354 More... NCBI chrNW_004624754:13,420,594...13,511,672
Ensembl chrNW_004624754:13,420,603...13,511,523
JBrowse link
focal segmental glomerulosclerosis 5 term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adss1 adenylosuccinate synthase 1 ISO ClinVar Annotator: match by term: Focal segmental glomerulosclerosis 5 ClinVar PMID:28492532 NCBI chrNW_004624734:536,109...552,406
Ensembl chrNW_004624734:535,101...552,535
JBrowse link
G Akt1 AKT serine/threonine kinase 1 ISO ClinVar Annotator: match by term: Focal segmental glomerulosclerosis 5 ClinVar PMID:28492532 NCBI chrNW_004624734:507,880...525,295
Ensembl chrNW_004624734:509,368...525,295
JBrowse link
G Brf1 BRF1 general transcription factor IIIB subunit ISO ClinVar Annotator: match by term: Focal segmental glomerulosclerosis 5 ClinVar PMID:28492532 NCBI chrNW_004624734:213,536...280,816
Ensembl chrNW_004624734:213,895...279,777
JBrowse link
G Btbd6 BTB domain containing 6 ISO ClinVar Annotator: match by term: Focal segmental glomerulosclerosis 5 ClinVar PMID:28492532 NCBI chrNW_004624734:255,182...257,494
Ensembl chrNW_004624734:255,564...257,375
JBrowse link
G Cdca4 cell division cycle associated 4 ISO ClinVar Annotator: match by term: Focal segmental glomerulosclerosis 5 ClinVar PMID:28492532 NCBI chrNW_004624734:375,351...390,595
Ensembl chrNW_004624734:383,667...389,554
JBrowse link
G Cep170b centrosomal protein 170B ISO ClinVar Annotator: match by term: Focal segmental glomerulosclerosis 5 ClinVar PMID:28492532 NCBI chrNW_004624734:442,432...466,891
Ensembl chrNW_004624734:441,815...464,966
JBrowse link
G Clba1 clathrin binding box of aftiphilin containing 1 ISO ClinVar Annotator: match by term: Focal segmental glomerulosclerosis 5 ClinVar PMID:28492532 NCBI chrNW_004624734:394,718...401,828
Ensembl chrNW_004624734:394,627...401,296
JBrowse link
G Gpr132 G protein-coupled receptor 132 ISO ClinVar Annotator: match by term: Focal segmental glomerulosclerosis 5 ClinVar PMID:28492532 NCBI chrNW_004624734:351,220...374,603 JBrowse link
G Inf2 inverted formin 2 ISO ClinVar Annotator: match by term: Focal segmental glomerulosclerosis 5 | ClinVar Annotator: match by term: INF2-related condition OMIM
ClinVar
PMID:6054293 PMID:9536098 PMID:16199547 PMID:17576681 PMID:20023659 More... NCBI chrNW_004624734:555,188...577,930
Ensembl chrNW_004624734:558,043...567,837
JBrowse link
G Jag2 jagged canonical Notch ligand 2 ISO ClinVar Annotator: match by term: Focal segmental glomerulosclerosis 5 ClinVar PMID:28492532 NCBI chrNW_004624734:308,371...327,496
Ensembl chrNW_004624734:308,375...327,604
JBrowse link
G Nudt14 nudix hydrolase 14 ISO ClinVar Annotator: match by term: Focal segmental glomerulosclerosis 5 ClinVar PMID:28492532 NCBI chrNW_004624734:288,223...304,136
Ensembl chrNW_004624734:298,357...304,048
JBrowse link
G Pacs2 phosphofurin acidic cluster sorting protein 2 ISO ClinVar Annotator: match by term: Focal segmental glomerulosclerosis 5 ClinVar PMID:28492532 NCBI chrNW_004624734:125,190...184,690
Ensembl chrNW_004624734:125,190...184,756
JBrowse link
G Pld4 phospholipase D family member 4 ISO ClinVar Annotator: match by term: Focal segmental glomerulosclerosis 5 ClinVar PMID:28492532 NCBI chrNW_004624734:432,069...439,078
Ensembl chrNW_004624734:431,956...438,170
JBrowse link
G Siva1 SIVA1 apoptosis inducing factor ISO ClinVar Annotator: match by term: Focal segmental glomerulosclerosis 5 ClinVar PMID:28492532 NCBI chrNW_004624734:530,711...535,281 JBrowse link
G Zbtb42 zinc finger and BTB domain containing 42 ISO ClinVar Annotator: match by term: Focal segmental glomerulosclerosis 5 ClinVar PMID:28492532 NCBI chrNW_004624734:500,804...503,860 JBrowse link
focal segmental glomerulosclerosis 6 term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Myo1e myosin IE ISO ClinVar Annotator: match by term: Focal segmental glomerulosclerosis 6 | ClinVar Annotator: match by term: MYO1E-related condition OMIM
ClinVar
PMID:9536098 PMID:17576681 PMID:21756023 PMID:25741868 PMID:28492532 More... NCBI chrNW_004624781:12,682,614...12,866,990
Ensembl chrNW_004624781:12,682,514...12,871,099
JBrowse link
focal segmental glomerulosclerosis 7 term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pax2 paired box 2 ISO ClinVar Annotator: match by term: Focal segmental glomerulosclerosis 7 OMIM
ClinVar
PMID:3077329 PMID:3377002 PMID:8589702 PMID:9106533 PMID:10466411 More... NCBI chrNW_004624831:375,851...453,968
Ensembl chrNW_004624831:375,866...453,930
JBrowse link
focal segmental glomerulosclerosis 8 term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Anln anillin actin binding protein ISO ClinVar Annotator: match by term: ANLN-related condition | ClinVar Annotator: match by term: Focal segmental glomerulosclerosis 8 OMIM
ClinVar
PMID:24676636 PMID:25741868 PMID:28106320 PMID:28492532 PMID:29869118 NCBI chrNW_004624740:24,756,633...24,831,168
Ensembl chrNW_004624740:24,756,234...24,830,978
JBrowse link
G Synpo synaptopodin ISO ClinVar Annotator: match by term: Focal segmental glomerulosclerosis 8 ClinVar PMID:25741868 PMID:33615071 NCBI chrNW_004624774:9,860,274...9,912,722
Ensembl chrNW_004624774:9,902,851...9,910,752
JBrowse link
focal segmental glomerulosclerosis 9 term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Crb2 crumbs cell polarity complex component 2 ISO ClinVar Annotator: match by term: Focal segmental glomerulosclerosis 9 OMIM
ClinVar
PMID:25557779 PMID:25741868 PMID:26795916 PMID:27004616 PMID:27942854 More... NCBI chrNW_004624760:11,576,683...11,598,354
Ensembl chrNW_004624760:11,579,163...11,598,287
JBrowse link
Focal Segmental Glomerulosclerosis and Neurodevelopmental Syndrome term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Trim8 tripartite motif containing 8 ISO ClinVar Annotator: match by term: Focal segmental glomerulosclerosis and neurodevelopmental syndrome | ClinVar Annotator: match by term: TRIM8-related condition OMIM
ClinVar
PMID:25741868 PMID:27346735 PMID:28492532 PMID:29758562 PMID:30244534 More... NCBI chrNW_004624831:2,020,185...2,031,001
Ensembl chrNW_004624831:2,020,227...2,032,099
JBrowse link
Glomerulonephritis with Isolated C3 Deposits and Factor H Deficiency term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cfh complement factor H ISO DNA:SNPs,Haplotype:: RGD PMID:17517971 RGD:7364995 NCBI chrNW_004624798:3,332,549...3,414,435 JBrowse link
Glomerulopathy with Giant Fibrillar Deposits term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atic 5-aminoimidazole-4-carboxamide ribonucleotide formyltransferase/IMP cyclohydrolase ISO ClinVar Annotator: match by term: Glomerulopathy with fibronectin deposits 2 ClinVar PMID:25741868 PMID:28492532 PMID:29100092 PMID:32200603 NCBI chrNW_004624765:782,703...809,461
Ensembl chrNW_004624765:782,701...809,448
JBrowse link
G Fn1 fibronectin 1 ISO ClinVar Annotator: match by term: Glomerulopathy with fibronectin deposits 2 OMIM
ClinVar
PMID:1544672 PMID:7564073 PMID:7747733 PMID:9536098 PMID:12042895 More... NCBI chrNW_004624765:707,872...775,056
Ensembl chrNW_004624765:707,755...775,056
JBrowse link
G Inf2 inverted formin 2 ISO ClinVar Annotator: match by term: Glomerulopathy with fibronectin deposits 2 ClinVar PMID:25741868 NCBI chrNW_004624734:555,188...577,930
Ensembl chrNW_004624734:558,043...567,837
JBrowse link
glomerulosclerosis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ace angiotensin I converting enzyme treatment ISO RGD PMID:21718676 RGD:12879389 NCBI chrNW_004624849:998,262...1,019,305
Ensembl chrNW_004624849:998,277...1,019,521
JBrowse link
G Ager advanced glycosylation end-product specific receptor treatment ISO associated with Diabetic Nephropathies RGD PMID:20554645 PMID:23046363 RGD:7243247 RGD:7244139 NCBI chrNW_004624754:24,138,086...24,140,900 JBrowse link
G Agtr1 angiotensin II receptor type 1 ISO mRNA:decreased expression:kidney RGD PMID:12495295 RGD:6903859 NCBI chrNW_004624730:25,964,848...26,006,468
Ensembl chrNW_004624730:25,964,811...26,006,463
JBrowse link
G Agtr2 angiotensin II receptor type 2 ISO mRNA:increased expression:kidney
associated with Kidney Failure, Chronic
RGD PMID:12495295 PMID:20042458 PMID:20631980 RGD:6903284 RGD:6903859 RGD:6903882 NCBI chrNW_004624967:327,627...332,000
Ensembl chrNW_004624967:329,284...330,372
JBrowse link
G Apoe apolipoprotein E ISO protein:increased expression:renal glomerulus (rat) RGD PMID:21907828 PMID:22207560 RGD:6903199 RGD:6903285 NCBI chrNW_004624907:1,752,322...1,755,308 JBrowse link
G Col3a1 collagen type III alpha 1 chain ISO RGD PMID:20610530 RGD:7257557 NCBI chrNW_004624899:1,192,078...1,230,528
Ensembl chrNW_004624899:1,192,360...1,230,404
JBrowse link
G Esr2 estrogen receptor 2 susceptibility ISO protein:decreased expression:renal glomerulus (mouse) RGD PMID:12000739 RGD:7364801 NCBI chrNW_004624734:36,742,913...36,862,993
Ensembl chrNW_004624734:36,759,104...36,825,295
JBrowse link
G Fbn1 fibrillin 1 ISO associated with Hypertension RGD PMID:16380460 RGD:7365080 NCBI chrNW_004624731:11,086,240...11,318,111
Ensembl chrNW_004624731:11,086,844...11,318,102
JBrowse link
G Hbegf heparin binding EGF like growth factor induced ISO RGD PMID:16107576 RGD:1556472 NCBI chrNW_004624743:33,112,105...33,124,145
Ensembl chrNW_004624743:33,112,036...33,124,169
JBrowse link
G Il1b interleukin 1 beta ISO associated with Hypertension RGD PMID:19948880 RGD:7175503 NCBI chrNW_004624749:12,852,128...12,858,478
Ensembl chrNW_004624749:12,852,021...12,858,760
JBrowse link
G Mmp1 matrix metallopeptidase 1 ISO associated with Hyperhomocysteinemia
protein:decreased expression:kidney (rat)
RGD PMID:20406136 PMID:21275176 RGD:7207203 RGD:7207363 NCBI chrNW_004624878:71,642...79,660
Ensembl chrNW_004624878:71,642...79,602
JBrowse link
G Mmp9 matrix metallopeptidase 9 ISO associated with Obesity;mRNA:decreased expression:glomerulus
associated with Hyperhomocysteinemia
RGD PMID:9300240 PMID:20406136 RGD:7207203 RGD:8547929 NCBI chrNW_004624790:8,584,399...8,591,763
Ensembl chrNW_004624790:8,583,457...8,591,713
JBrowse link
G Nphs1 NPHS1 adhesion molecule, nephrin treatment ISO RGD PMID:22125642 RGD:40902998 NCBI chrNW_004624794:10,117,464...10,138,511
Ensembl chrNW_004624794:10,116,777...10,135,963
JBrowse link
G Pax2 paired box 2 ISO ClinVar Annotator: match by term: Glomerulosclerosis ClinVar PMID:3377002 PMID:8589702 PMID:9106533 PMID:11093271 PMID:11241473 More... NCBI chrNW_004624831:375,851...453,968
Ensembl chrNW_004624831:375,866...453,930
JBrowse link
G Pla2g7 phospholipase A2 group VII ISO RGD PMID:16213192 RGD:7248790 NCBI chrNW_004624754:13,905,084...13,932,366
Ensembl chrNW_004624754:13,904,797...13,931,670
JBrowse link
G Plekha7 pleckstrin homology domain containing A7 ameliorates ISO compared to wild type RGD PMID:25136115 RGD:11079199 NCBI chrNW_004624766:8,421,069...8,655,016
Ensembl chrNW_004624766:8,421,188...8,655,236
JBrowse link
G Pparg peroxisome proliferator activated receptor gamma treatment ISO RGD PMID:11318962 RGD:8553043 NCBI chrNW_004624956:84,673...207,176
Ensembl chrNW_004624956:83,842...149,481
JBrowse link
G Rgs2 regulator of G protein signaling 2 susceptibility ISO associated with Hypertension RGD PMID:26606876 RGD:13524570 NCBI chrNW_004624814:754,743...758,148
Ensembl chrNW_004624814:753,164...758,192
JBrowse link
G Rnls renalase, FAD dependent amine oxidase ISO RGD PMID:24022426 RGD:7327155 NCBI chrNW_004624791:14,542,625...14,873,393 JBrowse link
G Serpine1 serpin family E member 1 treatment ISO mRNA, protein:increased expression:kidney (rat) RGD PMID:26999660 PMID:27129290 RGD:11073618 RGD:11073688 NCBI chrNW_004624740:16,128,145...16,136,696
Ensembl chrNW_004624740:16,128,059...16,137,337
JBrowse link
G Shc1 SHC adaptor protein 1 ameliorates ISO RGD PMID:27270176 RGD:12792230 NCBI chrNW_004624885:2,511,039...2,520,883
Ensembl chrNW_004624885:2,511,240...2,521,155
JBrowse link
G Slc2a1 solute carrier family 2 member 1 ISO RGD PMID:19918242 RGD:12879501 NCBI chrNW_004624892:2,110,310...2,148,023
Ensembl chrNW_004624892:2,117,561...2,148,037
JBrowse link
G Spp1 secreted phosphoprotein 1 ISO RGD PMID:12675855 RGD:6903837 NCBI chrNW_004624872:4,505,796...4,513,247
Ensembl chrNW_004624872:4,505,522...4,513,742
JBrowse link
G Synpo synaptopodin treatment ISO RGD PMID:22125642 RGD:40902998 NCBI chrNW_004624774:9,860,274...9,912,722
Ensembl chrNW_004624774:9,902,851...9,910,752
JBrowse link
G Tnfrsf1b TNF receptor superfamily member 1B ISO associated with Hypertension RGD PMID:23389459 RGD:7245475 NCBI chrNW_004624818:894,470...922,806
Ensembl chrNW_004624818:896,150...922,710
JBrowse link
hypotrichosis-lymphedema-telangiectasia-renal defect syndrome term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sox18 SRY-box transcription factor 18 ISO ClinVar Annotator: match by term: Hypotrichosis-lymphedema-telangiectasia-renal defect syndrome OMIM
ClinVar
PMID:2484451 PMID:12740761 PMID:24697860 PMID:25741868 PMID:28492532 More... NCBI chrNW_004624741:29,679,274...29,681,069
Ensembl chrNW_004624741:29,679,091...29,681,049
JBrowse link
IgA glomerulonephritis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ace angiotensin I converting enzyme disease_progression ISO DNA:polymorphism:intron:
ClinVar Annotator: match by term: Susceptibility to progression to renal failure in IgA nephropathy
RGD
ClinVar
PMID:1313972 PMID:1319114 PMID:1328889 PMID:1386652 PMID:1976655 More... RGD:7257515 NCBI chrNW_004624849:998,262...1,019,305
Ensembl chrNW_004624849:998,277...1,019,521
JBrowse link
G Acsm3 acyl-CoA synthetase medium chain family member 3 disease_progression ISO DNA:polymorphism: : RGD PMID:12484505 RGD:7241283 NCBI chrNW_004624782:6,930,461...6,958,867
Ensembl chrNW_004624782:6,930,505...6,959,069
JBrowse link
G Adam10 ADAM metallopeptidase domain 10 ISO CTD Direct Evidence: marker/mechanism CTD PMID:32715474 NCBI chrNW_004624781:13,195,390...13,321,823
Ensembl chrNW_004624781:13,195,755...13,321,823
JBrowse link
G Add1 adducin 1 disease_progression ISO DNA:polymorphism:cds:rs4961(human) RGD PMID:19838659 RGD:7174725 NCBI chrNW_004624755:24,854,742...24,927,912
Ensembl chrNW_004624755:24,854,742...24,928,006
JBrowse link
G Add2 adducin 2 disease_progression ISO DNA:polymorphism:cds: rs4984(human) RGD PMID:19838659 RGD:7174725 NCBI chrNW_004624762:2,619,371...2,726,586
Ensembl chrNW_004624762:2,674,620...2,726,587
JBrowse link
G Agt angiotensinogen ISO CTD Direct Evidence: marker/mechanism CTD PMID:9259580 NCBI chrNW_004624775:18,846,222...18,856,093
Ensembl chrNW_004624775:18,849,118...18,855,577
JBrowse link
G Agtr1 angiotensin II receptor type 1 ISO protein:increased expression:kidney tubule RGD PMID:15930094 RGD:6903851 NCBI chrNW_004624730:25,964,848...26,006,468
Ensembl chrNW_004624730:25,964,811...26,006,463
JBrowse link
G Agtr2 angiotensin II receptor type 2 disease_progression ISO protein:increased expression:kidney tubule
DNA:polymorphism: :1818A>T (human)
RGD PMID:15930094 PMID:19194560 RGD:6903844 RGD:6903851 NCBI chrNW_004624967:327,627...332,000
Ensembl chrNW_004624967:329,284...330,372
JBrowse link
G Aurkb aurora kinase B ISO CTD Direct Evidence: marker/mechanism CTD PMID:25133636 NCBI chrNW_004624786:10,769,797...10,775,142
Ensembl chrNW_004624786:10,765,610...10,775,112
JBrowse link
G B4galt1 beta-1,4-galactosyltransferase 1 ISO OMIM:161950 | OMIM:616818 MouseDO NCBI chrNW_004624736:37,848,431...37,927,291
Ensembl chrNW_004624736:37,848,117...37,927,980
JBrowse link
G C1qa complement C1q A chain ISO CTD Direct Evidence: marker/mechanism CTD PMID:8840296 PMID:25133636 NCBI chrNW_004624764:7,363,615...7,366,408
Ensembl chrNW_004624764:7,363,567...7,366,617
JBrowse link
G C1qb complement C1q B chain ISO CTD Direct Evidence: marker/mechanism CTD PMID:25133636 NCBI chrNW_004624764:7,377,013...7,382,953
Ensembl chrNW_004624764:7,376,967...7,383,445
JBrowse link
G C2 complement C2 ISO CTD Direct Evidence: marker/mechanism CTD PMID:25133636 NCBI chrNW_004624754:24,316,778...24,327,065
Ensembl chrNW_004624754:24,317,058...24,322,656
JBrowse link
G C3 complement C3 ISO mRNA,protein:increased expression, increased activity:kidney RGD PMID:11287758 RGD:7175543 NCBI chrNW_004624828:3,773,816...3,798,077
Ensembl chrNW_004624828:3,770,221...3,797,946
JBrowse link
G Card9 caspase recruitment domain family member 9 ISO CTD Direct Evidence: marker/mechanism CTD PMID:25305756 NCBI chrNW_004624760:1,533,247...1,542,529
Ensembl chrNW_004624760:1,533,390...1,540,162
JBrowse link
G Ccl20 C-C motif chemokine ligand 20 disease_progression ISO RGD PMID:23192593 RGD:7483632 NCBI chrNW_004624843:2,017,738...2,021,153 JBrowse link
G Ccr6 C-C motif chemokine receptor 6 disease_progression ISO RGD PMID:23192593 RGD:7483632 NCBI chrNW_004624785:12,190,802...12,203,924 JBrowse link
G Cd14 CD14 molecule disease_progression ISO DNA:polymorphism:promoter:c. -159C>T (human) RGD PMID:12566518 RGD:7204499 NCBI chrNW_004624743:33,372,023...33,374,438
Ensembl chrNW_004624743:33,367,898...33,373,922
JBrowse link
G Cd163 CD163 molecule ISO CTD Direct Evidence: marker/mechanism CTD PMID:25133636 NCBI chrNW_004624860:3,976,746...4,000,349
Ensembl chrNW_004624860:3,975,747...4,000,349
JBrowse link
G Cd44 CD44 molecule (IN blood group) ISO CTD Direct Evidence: marker/mechanism CTD PMID:25133636 NCBI chrNW_004624767:11,938,452...12,024,970
Ensembl chrNW_004624767:11,938,028...12,025,069
JBrowse link
G Cfb complement factor B disease_progression ISO mRNA:increased expression:kidney
protein:increased expression:serum
RGD PMID:3118258 PMID:8567024 PMID:17385664 RGD:7242737 RGD:7242754 RGD:7242759 NCBI chrNW_004624754:24,310,344...24,316,482
Ensembl chrNW_004624754:24,310,247...24,317,366
JBrowse link
G Chga chromogranin A ISO associated with Hypertension;DNA:polymorphism:promoter:-415T>C (human) RGD PMID:20113265 RGD:6906902 NCBI chrNW_004624734:9,405,121...9,416,774
Ensembl chrNW_004624734:9,404,916...9,416,902
JBrowse link
G Coro1c coronin 1C ISO CTD Direct Evidence: marker/mechanism CTD PMID:25133636 NCBI chrNW_004624747:11,879,315...11,967,496
Ensembl chrNW_004624747:11,879,215...11,963,250
JBrowse link
G Fas Fas cell surface death receptor treatment ISO RGD PMID:29844269 RGD:13792576 NCBI chrNW_004624791:15,290,022...15,315,848
Ensembl chrNW_004624791:15,289,348...15,315,848
JBrowse link
G Fcgr3a Fc fragment of IgG receptor IIIa disease_progression ISO DNA:polymorphism:exon:p.F176V(human) RGD PMID:16221721 RGD:5508463 NCBI chrNW_004624826:51,387...59,117 JBrowse link
G Fn1 fibronectin 1 ISO protein:increased expression:kidney RGD PMID:15925904 RGD:7206844 NCBI chrNW_004624765:707,872...775,056
Ensembl chrNW_004624765:707,755...775,056
JBrowse link
G Foxm1 forkhead box M1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:25133636 NCBI chrNW_004624860:206,367...222,035
Ensembl chrNW_004624860:207,242...219,959
JBrowse link
G Havcr1 hepatitis A virus cellular receptor 1 ISO protein:increased expression:urine: RGD PMID:21467131 PMID:23135864 RGD:7245479 RGD:7245983 NCBI chrNW_004624733:32,284,793...32,310,980 JBrowse link
G Hpse heparanase ISO CTD Direct Evidence: marker/mechanism CTD PMID:25133636 NCBI chrNW_004624900:296,626...335,624
Ensembl chrNW_004624900:296,676...335,570
JBrowse link
G Igf1r insulin like growth factor 1 receptor ISO DNA: snp::rs2229765 RGD PMID:21047277 RGD:7242795 NCBI chrNW_004624768:5,396,027...5,688,435
Ensembl chrNW_004624768:5,396,156...5,681,809
JBrowse link
G Il18 interleukin 18 ISO RGD PMID:22518072 RGD:6893446 NCBI chrNW_004624784:7,294,286...7,312,959
Ensembl chrNW_004624784:7,294,183...7,304,687
JBrowse link
G Il1a interleukin 1 alpha no_association ISO DNA:SNP:promoter RGD PMID:21049406 RGD:6907116 NCBI chrNW_004624749:12,795,967...12,805,658
Ensembl chrNW_004624749:12,795,946...12,805,154
JBrowse link
G Il1b interleukin 1 beta no_association ISO DNA:SNP
DNA:SNPs: :rs1143627, rs3917356, rs1143633 (human)
RGD PMID:19280228 PMID:21049406 RGD:6907082 RGD:6907116 NCBI chrNW_004624749:12,852,128...12,858,478
Ensembl chrNW_004624749:12,852,021...12,858,760
JBrowse link
G Il1rn interleukin 1 receptor antagonist susceptibility ISO DNA:polymorphisms:intron, 3' utr:IVS1+1890G>T, IVS1+8796A>G, *138C>G (rs928940, rs439154, rs315951) (human)
response to immunoglobulin therapy
DNA:repeats:intron:IVS2+914_1000dup IL1RN*2 (human)
mouse model treated with human protein
rat model treated with human protein
protein:decreased expression:serum, urine (human)
RGD PMID:9370186 PMID:9844059 PMID:10079261 PMID:10566895 PMID:10916103 More... RGD:6906961 RGD:6907082 RGD:6907414 RGD:6907427 RGD:6909131 RGD:6909132 RGD:6909150 NCBI chrNW_004624749:13,210,365...13,224,471
Ensembl chrNW_004624749:13,210,476...13,225,890
JBrowse link
G Kif15 kinesin family member 15 ISO CTD Direct Evidence: marker/mechanism CTD PMID:25133636 NCBI chrNW_004624730:75,644,242...75,707,159
Ensembl chrNW_004624730:75,644,163...75,707,043
JBrowse link
G Lair1 leukocyte associated immunoglobulin like receptor 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:25133636 NCBI chrNW_004624832:2,323,801...2,336,720 JBrowse link
G Laptm5 lysosomal protein transmembrane 5 ISO CTD Direct Evidence: marker/mechanism CTD PMID:25133636 NCBI chrNW_004624764:14,208,144...14,277,208
Ensembl chrNW_004624764:14,207,094...14,228,135
JBrowse link
G Lhfpl2 LHFPL tetraspan subfamily member 2 ISO CTD Direct Evidence: marker/mechanism CTD PMID:25133636 NCBI chrNW_004624869:2,991,062...3,146,048
Ensembl chrNW_004624869:2,991,062...3,071,841
JBrowse link
G LOC101703821 HLA class II histocompatibility antigen, DQ beta 1 chain disease_progression ISO DNA:polymorphism: :HLA-DQB1*0301(human)
CTD Direct Evidence: marker/mechanism
RGD
CTD
PMID:7638860 PMID:25305756 RGD:36174018 NCBI chrNW_004624754:23,895,509...23,902,487
Ensembl chrNW_004624754:23,895,607...23,906,713
JBrowse link
G Man2b1 mannosidase alpha class 2B member 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:25133636 NCBI chrNW_004624901:285,981...307,177
Ensembl chrNW_004624901:285,978...307,249
JBrowse link
G Mertk MER proto-oncogene, tyrosine kinase ISO CTD Direct Evidence: marker/mechanism CTD PMID:25133636 NCBI chrNW_004624749:337,441...444,730
Ensembl chrNW_004624749:341,289...443,640
JBrowse link
G Mmp14 matrix metallopeptidase 14 ISO mRNA:increased expression:glomerulus RGD PMID:9848780 RGD:2314955 NCBI chrNW_004624820:9,667,371...9,677,488
Ensembl chrNW_004624820:9,667,262...9,677,774
JBrowse link
G Mtr 5-methyltetrahydrofolate-homocysteine methyltransferase ISO DNA:polymorphism:Cds :2756A>G(human) RGD PMID:21737517 RGD:7207085 NCBI chrNW_004624775:13,791,690...13,903,888
Ensembl chrNW_004624775:13,792,043...13,896,559
JBrowse link
G Muc20 mucin 20, cell surface associated disease_progression ISO DNA:repeat RGD PMID:16508246 RGD:7364789 NCBI chrNW_004624730:61,124,764...61,149,993 JBrowse link
G Ngf nerve growth factor ISO DNA:SNP: :rs11102930 (human) RGD PMID:21178826 RGD:7242801 NCBI chrNW_004624772:11,009,765...11,070,050
Ensembl chrNW_004624772:11,010,845...11,070,017
JBrowse link
G Notch2 notch receptor 2 ISO CTD Direct Evidence: marker/mechanism CTD PMID:32715474 NCBI chrNW_004624772:15,572,350...15,726,312
Ensembl chrNW_004624772:15,571,998...15,726,426
JBrowse link
G Otub1 OTU deubiquitinase, ubiquitin aldehyde binding 1 ISO protein:increased expression:kidney RGD PMID:22279542 RGD:7175260 NCBI chrNW_004624767:22,278,572...22,289,576
Ensembl chrNW_004624767:22,278,572...22,289,640
JBrowse link
G Pde5a phosphodiesterase 5A ISO DNA:SNP: :rs13124532(human) RGD PMID:20563733 RGD:7248685 NCBI chrNW_004624964:11,085...126,027
Ensembl chrNW_004624964:14,216...126,553
JBrowse link
G Pigr polymeric immunoglobulin receptor ISO ClinVar Annotator: match by term: IgA glomerulonephritis ClinVar PMID:12740691 PMID:16282702 NCBI chrNW_004624807:4,545,508...4,562,976
Ensembl chrNW_004624807:4,545,481...4,563,357
JBrowse link
G Pla2g7 phospholipase A2 group VII disease_progression ISO DNA:polymorphism:exon: RGD PMID:12220450 RGD:7257515 NCBI chrNW_004624754:13,905,084...13,932,366
Ensembl chrNW_004624754:13,904,797...13,931,670
JBrowse link
G Plau plasminogen activator, urokinase ISO CTD Direct Evidence: therapeutic CTD PMID:9002298 NCBI chrNW_004624754:7,405,637...7,415,870
Ensembl chrNW_004624754:7,408,983...7,416,559
JBrowse link
G Prc1 protein regulator of cytokinesis 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:25133636 NCBI chrNW_004624768:17,266,850...17,289,051
Ensembl chrNW_004624768:17,266,964...17,288,430
JBrowse link
G Scgb1a1 secretoglobin family 1A member 1 disease_progression ISO OMIM:161950 | OMIM:616818 RGD
MouseDO
PMID:11967037 RGD:6903255 NCBI chrNW_004624926:1,029,120...1,030,250 JBrowse link
G Sele selectin E ISO ClinVar Annotator: match by term: IgA nephropathy, susceptibility to ClinVar PMID:11828340 PMID:16282702 NCBI chrNW_004624826:7,624,852...7,635,330
Ensembl chrNW_004624826:7,626,380...7,635,309
JBrowse link
G Sell selectin L ISO RGD PMID:11828340 PMID:17452405 RGD:1625253 RGD:7175290 NCBI chrNW_004624826:7,590,576...7,612,370
Ensembl chrNW_004624826:7,587,970...7,610,163
JBrowse link
G Serpinb7 serpin family B member 7 disease_progression ISO DNA:SNPs:3' utr:2093C>T, 2180C>T (human)
DNA:SNP: :23167A>G (human)
DNA:SNP:5' utr, exon:267G>A (human)
RGD PMID:16550745 PMID:16796905 PMID:18793525 RGD:7207366 RGD:7207372 RGD:7207380 NCBI chrNW_004624792:9,730,223...9,794,673 JBrowse link
G Shh sonic hedgehog signaling molecule ISO RGD PMID:24744439 RGD:12859042 NCBI chrNW_004624800:2,202,986...2,215,309
Ensembl chrNW_004624800:2,203,393...2,212,068
JBrowse link
G Spry2 sprouty RTK signaling antagonist 2 susceptibility ISO ClinVar Annotator: match by term: IgA nephropathy, susceptibility to, 3 OMIM
ClinVar
PMID:25741868 PMID:25782674 NCBI chrNW_004624751:20,091,612...20,096,581
Ensembl chrNW_004624751:20,091,609...20,096,563
JBrowse link
G St6galnac2 ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 2 ISO CTD Direct Evidence: marker/mechanism CTD PMID:17480010 NCBI chrNW_004624801:6,417,416...6,434,848
Ensembl chrNW_004624801:6,418,793...6,427,290
JBrowse link
G Stat4 signal transducer and activator of transcription 4 no_association
disease_progression
ISO DNA:SNP:intron:c.274-28828C>G (rs10181656) (human)
DNA:SNP: :rs7561832 (human)
RGD PMID:20045654 PMID:20479942 RGD:7207872 RGD:7207878 NCBI chrNW_004624854:4,975,724...5,056,940
Ensembl chrNW_004624854:4,976,507...5,057,391
JBrowse link
G Tgfb1 transforming growth factor beta 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:11728950 NCBI chrNW_004624907:162,567...175,696
Ensembl chrNW_004624907:161,569...176,605
JBrowse link
G Timp1 TIMP metallopeptidase inhibitor 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:25133636 NCBI chrNW_004624978:120,723...125,006
Ensembl chrNW_004624978:121,803...124,912
JBrowse link
G Tlr1 toll like receptor 1 susceptibility ISO DNA:snps:promoter, cds:g.-414C>T, p.N248S (rs5743557, rs4833095) (human) RGD PMID:21108742 RGD:7246898 NCBI chrNW_004624840:7,287,772...7,349,282
Ensembl chrNW_004624840:7,287,781...7,290,162
JBrowse link
G Tnf tumor necrosis factor treatment ISO RGD PMID:9844059 RGD:6909132 NCBI chrNW_004624754:24,623,059...24,625,647
Ensembl chrNW_004624754:24,623,425...24,625,531
JBrowse link
G Tnfrsf1a TNF receptor superfamily member 1A treatment ISO protein:increased expression:serum RGD PMID:9844059 PMID:16209246 RGD:6907414 RGD:6909132 NCBI chrNW_004624860:3,111,244...3,123,041
Ensembl chrNW_004624860:3,111,630...3,122,711
JBrowse link
G Tnfrsf1b TNF receptor superfamily member 1B treatment ISO protein:increased expression:serum RGD PMID:9844059 PMID:16209246 RGD:6907414 RGD:6909132 NCBI chrNW_004624818:894,470...922,806
Ensembl chrNW_004624818:896,150...922,710
JBrowse link
G Tnfsf13 TNF superfamily member 13 ISO CTD Direct Evidence: marker/mechanism CTD PMID:22197929 NCBI chrNW_004624786:10,175,534...10,179,233
Ensembl chrNW_004624786:10,175,859...10,179,233
JBrowse link
G Tnfsf13b TNF superfamily member 13b ISO OMIM:161950 MouseDO NCBI chrNW_004624793:3,629,425...3,664,258 JBrowse link
G Tnfsf14 TNF superfamily member 14 ISO OMIM:161950 MouseDO NCBI chrNW_004624828:3,763,849...3,770,500 JBrowse link
G Vav3 vav guanine nucleotide exchange factor 3 ISO CTD Direct Evidence: marker/mechanism CTD PMID:25305756 NCBI chrNW_004624772:3,604,553...4,022,986
Ensembl chrNW_004624772:3,604,165...4,022,990
JBrowse link
G Vsig4 V-set and immunoglobulin domain containing 4 ISO CTD Direct Evidence: marker/mechanism CTD PMID:25133636 NCBI chrNW_004624898:1,268,998...1,288,756
Ensembl chrNW_004624898:1,268,886...1,289,180
JBrowse link
G Was WASP actin nucleation promoting factor ISO OMIM:161950 | OMIM:616818 MouseDO NCBI chrNW_004624893:453,793...493,696
Ensembl chrNW_004624893:487,396...493,482
JBrowse link
lipoid nephrosis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cdkn1a cyclin dependent kinase inhibitor 1A treatment ISO RGD PMID:24119646 RGD:10043363 NCBI chrNW_004624754:21,109,074...21,115,869
Ensembl chrNW_004624754:21,108,874...21,115,885
JBrowse link
G Il13 interleukin 13 ISO RGD PMID:17429054 RGD:2290347 NCBI chrNW_004624733:39,427,189...39,430,019
Ensembl chrNW_004624733:39,428,095...39,429,843
JBrowse link
G Il17a interleukin 17A ISO Protein:increased expression:plasma (rat) RGD PMID:22772331 RGD:9068937 NCBI chrNW_004624855:3,911,349...3,914,214
Ensembl chrNW_004624855:3,911,349...3,913,136
JBrowse link
G Lgals1 galectin 1 ISO protein:decreased expression:glomerulus, podocytes (rat) RGD PMID:19079321 RGD:2316526 NCBI chrNW_004624752:10,220,115...10,223,434
Ensembl chrNW_004624752:10,219,872...10,223,317
JBrowse link
G Lmx1b LIM homeobox transcription factor 1 beta ISO ClinVar Annotator: match by term: Lipoid nephrosis ClinVar PMID:23687361 PMID:32581362 NCBI chrNW_004624760:8,701,204...8,772,147
Ensembl chrNW_004624760:8,698,139...8,772,147
JBrowse link
G Nr3c1 nuclear receptor subfamily 3 group C member 1 disease_progression ISO RGD PMID:17890747 RGD:7174718 NCBI chrNW_004624774:2,496,276...2,603,894
Ensembl chrNW_004624774:2,495,304...2,602,632
JBrowse link
G Stat6 signal transducer and activator of transcription 6 severity
no_association
ISO DNA:repeat:exon, 5' utr:g.-3041(GT)15-16 (human)
DNA:polymorphism:3' utr:g.2964G>A (human)
DNA:polymorphism:3' utr:2964G>A (human)
RGD PMID:12900808 PMID:15687724 PMID:19011907 RGD:7244138 RGD:7244144 RGD:7244146 NCBI chrNW_004624802:10,809,234...10,847,762
Ensembl chrNW_004624802:10,809,252...10,846,693
JBrowse link
lupus nephritis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ager advanced glycosylation end-product specific receptor ISO DNA:polymorphisms:promoter, intron:g.-429T>C rs1800625, g.-374T>A rs1800624, g.2184A>G rs3134940 (human) RGD PMID:22513366 RGD:6767309 NCBI chrNW_004624754:24,138,086...24,140,900 JBrowse link
G Apoc3 apolipoprotein C3 ISO protein:increased expression:serum RGD PMID:17957542 RGD:7207211 NCBI chrNW_004624784:12,244,565...12,246,790
Ensembl chrNW_004624784:12,244,646...12,246,790
JBrowse link
G C3 complement C3 ISO protein:decreased expression:serum
CTD Direct Evidence: marker/mechanism
RGD
CTD
PMID:21888025 PMID:31182691 RGD:7175544 NCBI chrNW_004624828:3,773,816...3,798,077
Ensembl chrNW_004624828:3,770,221...3,797,946
JBrowse link
G Cd40 CD40 molecule treatment ISO RGD PMID:18566369 PMID:19265127 PMID:23799000 RGD:7248418 RGD:7248425 RGD:7248429 NCBI chrNW_004624790:8,475,640...8,485,927
Ensembl chrNW_004624790:8,476,158...8,485,856
JBrowse link
G Cd40lg CD40 ligand treatment ISO protein:increased expression:serum RGD PMID:11751940 PMID:12632425 PMID:13130474 PMID:15693003 PMID:20726330 RGD:7248426 RGD:7248439 RGD:7248600 RGD:7248710 RGD:7248714 NCBI chrNW_004624808:10,472,028...10,484,407
Ensembl chrNW_004624808:10,472,572...10,484,338
JBrowse link
G Cfb complement factor B ISO RGD PMID:3183062 PMID:10623824 PMID:21893562 RGD:7242736 RGD:7242755 RGD:7242763 NCBI chrNW_004624754:24,310,344...24,316,482
Ensembl chrNW_004624754:24,310,247...24,317,366
JBrowse link
G Cfh complement factor H ISO RGD PMID:22171659 RGD:5684551 NCBI chrNW_004624798:3,332,549...3,414,435 JBrowse link
G Clu clusterin ISO mRNA:increased expression: epithelial cell of renal tubule RGD PMID:9546356 RGD:8890679 NCBI chrNW_004624758:22,431,331...22,444,185
Ensembl chrNW_004624758:22,426,918...22,444,357
JBrowse link
G Col1a1 collagen type I alpha 1 chain ISO associated with Graft vs Host Disease
mRNA, protein:increased expression:kidney cortex
RGD PMID:7700025 PMID:7723234 PMID:21354048 RGD:5688301 RGD:5688332 RGD:5688333 NCBI chrNW_004624795:6,167,504...6,183,208
Ensembl chrNW_004624795:6,168,797...6,183,071
JBrowse link
G Crp C-reactive protein no_association ISO DNA:SNP RGD PMID:15692982 PMID:17596285 PMID:18852001 PMID:20039408 RGD:5508454 RGD:6907400 RGD:6909145 RGD:6909146 NCBI chrNW_004624794:1,531,555...1,533,804
Ensembl chrNW_004624794:1,531,571...1,533,804
JBrowse link
G Csf1 colony stimulating factor 1 ISO RGD PMID:17659436 PMID:21885670 RGD:7257567 RGD:7257589 NCBI chrNW_004624772:5,663,374...5,705,965
Ensembl chrNW_004624772:5,663,070...5,707,753
JBrowse link
G Ctla4 cytotoxic T-lymphocyte associated protein 4 ISO RGD PMID:15146424 RGD:7204726 NCBI chrNW_004624765:12,449,205...12,454,324
Ensembl chrNW_004624765:12,449,205...12,454,324
JBrowse link
G Fas Fas cell surface death receptor ISO CTD Direct Evidence: marker/mechanism CTD PMID:33632240 PMID:38555047 NCBI chrNW_004624791:15,290,022...15,315,848
Ensembl chrNW_004624791:15,289,348...15,315,848
JBrowse link
G Fcgr2a Fc fragment of IgG receptor IIa ISO ClinVar Annotator: match by term: Lupus nephritis, susceptibility to ClinVar PMID:8636449 PMID:9843982 PMID:10675363 PMID:15367919 PMID:19915573 More... NCBI chrNW_004624826:23,930...34,735 JBrowse link
G Fcgr2b Fc fragment of IgG receptor IIb ISO RGD PMID:15681388 RGD:7240529 NCBI chrNW_004624826:97,605...112,101 JBrowse link
G Fcgr3a Fc fragment of IgG receptor IIIa susceptibility ISO DNA:SNP:cds:p.V158F (human) RGD PMID:17596285 RGD:5508454 NCBI chrNW_004624826:51,387...59,117 JBrowse link
G Ifng interferon gamma ISO protein:increased expression:serum,urine
CTD Direct Evidence: marker/mechanism
protein:increased processing:kidney
RGD
CTD
PMID:22764573 PMID:29925830 PMID:31182691 RGD:14974252 RGD:6893369 NCBI chrNW_004624802:163,261...166,534
Ensembl chrNW_004624802:163,261...166,534
JBrowse link
G Il17a interleukin 17A treatment ISO RGD PMID:25129462 RGD:9244623 NCBI chrNW_004624855:3,911,349...3,914,214
Ensembl chrNW_004624855:3,911,349...3,913,136
JBrowse link
G Il18 interleukin 18 ISO RGD PMID:20980973 RGD:6893449 NCBI chrNW_004624784:7,294,286...7,312,959
Ensembl chrNW_004624784:7,294,183...7,304,687
JBrowse link
G Il1b interleukin 1 beta ISO mRNA:increased expression:renal glomerulus (mouse) RGD PMID:20410215 PMID:21641991 RGD:7175315 RGD:7175344 NCBI chrNW_004624749:12,852,128...12,858,478
Ensembl chrNW_004624749:12,852,021...12,858,760
JBrowse link
G Il1rn interleukin 1 receptor antagonist resistance ISO associated with Lupus Erythematosus, Systemic; protein:increased expression:serum (human) RGD PMID:20538031 RGD:6907068 NCBI chrNW_004624749:13,210,365...13,224,471
Ensembl chrNW_004624749:13,210,476...13,225,890
JBrowse link
G Itgam integrin subunit alpha M ISO RGD PMID:21719445 RGD:5147916 NCBI chrNW_004624782:14,316,505...14,367,841
Ensembl chrNW_004624782:14,318,499...14,367,922
JBrowse link
G Jak1 Janus kinase 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:31182691 NCBI chrNW_004624742:29,631,391...29,723,981
Ensembl chrNW_004624742:29,689,965...29,723,981
JBrowse link
G Klkb1 kallikrein B1 susceptibility ISO DNA:SNPs:promoter: RGD PMID:19307730 RGD:7327150 NCBI chrNW_004624769:17,066,055...17,088,587
Ensembl chrNW_004624769:17,067,342...17,087,408
JBrowse link
G LOC101724812 C-C chemokine receptor type 1 disease_progression ISO RGD PMID:15153561 RGD:5688164 NCBI chrNW_004624730:74,822,848...74,828,614
Ensembl chrNW_004624730:74,826,659...74,827,726
JBrowse link
G Mbl2 mannose binding lectin 2 disease_progression ISO DNA:polymorphism:exon: RGD PMID:24850777 RGD:12910847 NCBI chrNW_004624791:10,881,319...10,886,294
Ensembl chrNW_004624791:10,881,268...10,886,297
JBrowse link
G Mmp2 matrix metallopeptidase 2 ISO CTD Direct Evidence: marker/mechanism CTD PMID:22479529 NCBI chrNW_004624757:1,450,680...1,479,160
Ensembl chrNW_004624757:1,448,698...1,479,255
JBrowse link
G Mmp9 matrix metallopeptidase 9 ISO CTD Direct Evidence: marker/mechanism CTD PMID:22479529 NCBI chrNW_004624790:8,584,399...8,591,763
Ensembl chrNW_004624790:8,583,457...8,591,713
JBrowse link
G Mpo myeloperoxidase susceptibility ISO DNA:polymorphism: :−463G > A (human) RGD PMID:17896805 RGD:7174701 NCBI chrNW_004624871:121,026...131,433
Ensembl chrNW_004624871:121,026...131,323
JBrowse link
G Mtor mechanistic target of rapamycin kinase ISO RGD PMID:17283580 RGD:7245502 NCBI chrNW_004624818:1,570,155...1,698,264
Ensembl chrNW_004624818:1,570,276...1,698,259
JBrowse link
G Muc20 mucin 20, cell surface associated ISO RGD PMID:14565953 RGD:7364790 NCBI chrNW_004624730:61,124,764...61,149,993 JBrowse link
G Nr3c1 nuclear receptor subfamily 3 group C member 1 ISO RGD PMID:17880936 PMID:21509671 RGD:7174713 RGD:7174734 NCBI chrNW_004624774:2,496,276...2,603,894
Ensembl chrNW_004624774:2,495,304...2,602,632
JBrowse link
G Otub1 OTU deubiquitinase, ubiquitin aldehyde binding 1 ISO protein:increased expression:kidney RGD PMID:22279542 RGD:7175260 NCBI chrNW_004624767:22,278,572...22,289,576
Ensembl chrNW_004624767:22,278,572...22,289,640
JBrowse link
G Pdcd1 programmed cell death 1 onset ISO DNA:polymorphism:intron:6867 C>T (human)
DNA:polymorphism: :
RGD PMID:15352422 PMID:15934088 PMID:21041733 RGD:7248675 RGD:7248676 RGD:7248678 NCBI chrNW_004624847:5,732,922...5,741,908
Ensembl chrNW_004624847:5,732,767...5,742,269
JBrowse link
G Sell selectin L ISO RGD PMID:20512127 RGD:7175284 NCBI chrNW_004624826:7,590,576...7,612,370
Ensembl chrNW_004624826:7,587,970...7,610,163
JBrowse link
G Serping1 serpin family G member 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:4014294 NCBI chrNW_004624864:3,091,397...3,103,084
Ensembl chrNW_004624864:3,091,083...3,103,090
JBrowse link
G Snrpe small nuclear ribonucleoprotein polypeptide E treatment ISO mouse model RGD PMID:15494537 RGD:10760401 NCBI chrNW_004624807:7,079,944...7,086,973
Ensembl chrNW_004624807:7,079,090...7,087,215
JBrowse link
G Stat1 signal transducer and activator of transcription 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:31182691 NCBI chrNW_004624854:5,067,578...5,106,052
Ensembl chrNW_004624854:5,067,535...5,102,106
JBrowse link
G Stat4 signal transducer and activator of transcription 4 ISO RGD PMID:20980973 RGD:6893449 NCBI chrNW_004624854:4,975,724...5,056,940
Ensembl chrNW_004624854:4,976,507...5,057,391
JBrowse link
G Stat6 signal transducer and activator of transcription 6 disease_progression ISO RGD PMID:12874250 RGD:7244140 NCBI chrNW_004624802:10,809,234...10,847,762
Ensembl chrNW_004624802:10,809,252...10,846,693
JBrowse link
G Tlr7 toll like receptor 7 ISO RGD PMID:19944565 RGD:7246905 NCBI chrNW_004624882:1,375,216...1,379,705 JBrowse link
G Tnf tumor necrosis factor ISO protein:increased expression:glomerular mesangial cell RGD PMID:7750940 RGD:7394786 NCBI chrNW_004624754:24,623,059...24,625,647
Ensembl chrNW_004624754:24,623,425...24,625,531
JBrowse link
G Tnfrsf11b TNF receptor superfamily member 11b ISO associated with Lupus Erythematosus, Systemic;protein:increased expression:urine RGD PMID:21691937 RGD:7205483 NCBI chrNW_004624763:17,139,109...17,166,398
Ensembl chrNW_004624763:17,138,847...17,166,453
JBrowse link
G Tnfrsf1a TNF receptor superfamily member 1A severity ISO RGD PMID:10906156 PMID:19201910 RGD:7245569 RGD:7245572 NCBI chrNW_004624860:3,111,244...3,123,041
Ensembl chrNW_004624860:3,111,630...3,122,711
JBrowse link
G Tnfrsf1b TNF receptor superfamily member 1B treatment ISO RGD PMID:22674120 PMID:22846145 RGD:7245541 RGD:7245544 NCBI chrNW_004624818:894,470...922,806
Ensembl chrNW_004624818:896,150...922,710
JBrowse link
G Vcam1 vascular cell adhesion molecule 1 severity ISO protein:increased expression:urine RGD PMID:22788914 RGD:7241032 NCBI chrNW_004624857:3,606,573...3,625,991
Ensembl chrNW_004624857:3,606,431...3,627,063
JBrowse link
membranoproliferative glomerulonephritis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Alb albumin ISO CTD Direct Evidence: marker/mechanism CTD PMID:1556257 NCBI chrNW_004624735:34,105,237...34,123,479
Ensembl chrNW_004624735:34,104,537...34,123,624
JBrowse link
G Angpt2 angiopoietin 2 ISO protein:increased expression:glomerulus (rat) RGD PMID:16014048 PMID:18272601 RGD:2314193 RGD:2314222 NCBI chrNW_004624861:4,457,519...4,510,035
Ensembl chrNW_004624861:4,457,158...4,509,623
JBrowse link
G C1qa complement C1q A chain ISO CTD Direct Evidence: marker/mechanism CTD PMID:8840296 NCBI chrNW_004624764:7,363,615...7,366,408
Ensembl chrNW_004624764:7,363,567...7,366,617
JBrowse link
G C3 complement C3 ISO ClinVar Annotator: match by term: Mesangiocapillary glomerulonephritis ClinVar PMID:32581362 NCBI chrNW_004624828:3,773,816...3,798,077
Ensembl chrNW_004624828:3,770,221...3,797,946
JBrowse link
G Ccn2 cellular communication network factor 2 ISO protein:increased expression:kidney, glomerulus (rat) RGD PMID:15172885 RGD:1601118 NCBI chrNW_004624753:6,022,033...6,024,866
Ensembl chrNW_004624753:6,023,069...6,024,833
JBrowse link
G Ccr6 C-C motif chemokine receptor 6 treatment ISO RGD PMID:23192593 RGD:7483632 NCBI chrNW_004624785:12,190,802...12,203,924 JBrowse link
G Cdk2 cyclin dependent kinase 2 ISO RGD PMID:17893107 RGD:2293563 NCBI chrNW_004624802:12,076,443...12,082,608
Ensembl chrNW_004624802:12,076,443...12,082,630
JBrowse link
G Cdkn1b cyclin dependent kinase inhibitor 1B ISO protein:decreased expression:kidney RGD PMID:16787597 RGD:2293620 NCBI chrNW_004624752:25,202,474...25,207,107
Ensembl chrNW_004624752:25,203,474...25,207,114
JBrowse link
G Cfb complement factor B ISO RGD PMID:2329415 PMID:12091909 RGD:7242760 RGD:734771 NCBI chrNW_004624754:24,310,344...24,316,482
Ensembl chrNW_004624754:24,310,247...24,317,366
JBrowse link
G Cfh complement factor H ISO ClinVar Annotator: match by term: Mesangiocapillary glomerulonephritis | ClinVar Annotator: match by term: Mesangiocapillary glomerulonephritis, type II | ClinVar Annotator: match by term: Non-immunoglobulin-mediated membranoproliferative glomerulonephritis ClinVar PMID:21415311 PMID:22223606 PMID:22403278 PMID:25741868 PMID:28492532 More... NCBI chrNW_004624798:3,332,549...3,414,435 JBrowse link
G Cfi complement factor I ISO RGD PMID:18202746 RGD:6906892 NCBI chrNW_004624830:111,123...151,668
Ensembl chrNW_004624830:111,004...151,514
JBrowse link
G Cxcr1 C-X-C motif chemokine receptor 1 ISO RGD PMID:23336303 RGD:7207859 NCBI chrNW_004624823:6,857,649...6,861,219
Ensembl chrNW_004624823:6,859,356...6,860,426
JBrowse link
G Edn1 endothelin 1 treatment ISO mRNA, protein:increased expression:glomerulus (rat) RGD PMID:8569091 PMID:11601021 RGD:4144848 RGD:8662296 NCBI chrNW_004624756:13,842,482...13,849,003
Ensembl chrNW_004624756:13,842,164...13,849,029
JBrowse link
G F5 coagulation factor V ISO RGD PMID:15172885 RGD:1601118 NCBI chrNW_004624826:7,438,632...7,507,322
Ensembl chrNW_004624826:7,438,682...7,507,012
JBrowse link
G Fn1 fibronectin 1 ISO RGD PMID:10082755 RGD:7206847 NCBI chrNW_004624765:707,872...775,056
Ensembl chrNW_004624765:707,755...775,056
JBrowse link
G Il1b interleukin 1 beta ISO RGD PMID:21871881 RGD:7175308 NCBI chrNW_004624749:12,852,128...12,858,478
Ensembl chrNW_004624749:12,852,021...12,858,760
JBrowse link
G Kcnt2 potassium sodium-activated channel subfamily T member 2 ISO ClinVar Annotator: match by term: Mesangiocapillary glomerulonephritis ClinVar PMID:32581362 NCBI chrNW_004624798:3,579,528...3,868,717
Ensembl chrNW_004624798:3,578,706...3,867,854
JBrowse link
G Myoc myocilin ISO protein:increased expression:renal glomerulus (rat) RGD PMID:15610237 RGD:7401266 NCBI chrNW_004624771:10,066,170...10,080,257
Ensembl chrNW_004624771:10,065,788...10,080,680
JBrowse link
G Pfn1 profilin 1 ISO RGD PMID:8651905 RGD:729497 NCBI chrNW_004624786:8,803,247...8,805,958
Ensembl chrNW_004624786:8,803,118...8,805,960
JBrowse link
G Pon1 paraoxonase 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:16175651 NCBI chrNW_004624813:1,953,796...1,979,846
Ensembl chrNW_004624813:1,949,614...1,979,882
JBrowse link
G Prf1 perforin 1 ISO mRNA:increased expression:glomerulus RGD PMID:10886554 RGD:1599935 NCBI chrNW_004624754:4,679,451...4,681,627
Ensembl chrNW_004624754:4,679,521...4,681,627
JBrowse link
G Sparc secreted protein acidic and cysteine rich ISO mRNA:increased expression:glomerulus RGD PMID:8644857 RGD:2300070 NCBI chrNW_004624733:37,348,993...37,369,804
Ensembl chrNW_004624733:37,338,284...37,369,804
JBrowse link
G Tgfbr2 transforming growth factor beta receptor 2 ISO RGD PMID:11703592 RGD:1601601 NCBI chrNW_004624788:8,447,679...8,535,821
Ensembl chrNW_004624788:8,447,542...8,535,959
JBrowse link
G Tlr1 toll like receptor 1 ISO mRNA:increased expression:renal glomerulus (mouse) RGD PMID:18256364 RGD:7246909 NCBI chrNW_004624840:7,287,772...7,349,282
Ensembl chrNW_004624840:7,287,781...7,290,162
JBrowse link
G Tlr2 toll like receptor 2 ISO mRNA:increased expression:renal glomerulus (mouse) RGD PMID:18256364 RGD:7246909 NCBI chrNW_004624858:4,931,820...4,984,175
Ensembl chrNW_004624858:4,979,485...4,981,833
JBrowse link
G Tlr4 toll like receptor 4 ISO mRNA:increased expression:renal glomerulus (mouse) RGD PMID:18256364 RGD:7246909 NCBI chrNW_004624760:17,596,516...17,608,955
Ensembl chrNW_004624760:17,598,630...17,609,120
JBrowse link
G Tlr5 toll like receptor 5 ISO mRNA:increased expression:renal glomerulus (mouse) RGD PMID:18256364 RGD:7246909 NCBI chrNW_004624835:5,495,723...5,503,462
Ensembl chrNW_004624835:5,500,461...5,503,034
JBrowse link
G Tlr6 toll like receptor 6 ISO mRNA:increased expression:renal glomerulus (mouse) RGD PMID:18256364 RGD:7246909 NCBI chrNW_004624840:7,323,022...7,349,334 JBrowse link
G Tlr7 toll like receptor 7 ISO mRNA:increased expression:renal glomerulus (mouse) RGD PMID:18256364 RGD:7246909 NCBI chrNW_004624882:1,375,216...1,379,705 JBrowse link
G Tlr8 toll like receptor 8 ISO mRNA:increased expression:renal glomerulus (mouse) RGD PMID:18256364 RGD:7246909 NCBI chrNW_004624882:1,240,519...1,247,311
Ensembl chrNW_004624882:1,240,626...1,312,468
JBrowse link
membranous glomerulonephritis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abca1 ATP binding cassette subfamily A member 1 ISO RGD PMID:12507911 RGD:1598547 NCBI chrNW_004624758:6,449,583...6,590,244
Ensembl chrNW_004624758:6,449,629...6,588,664
JBrowse link
G Alb albumin ISO CTD Direct Evidence: marker/mechanism CTD PMID:1342223 PMID:9794552 PMID:11938814 PMID:12776520 PMID:15385633 More... NCBI chrNW_004624735:34,105,237...34,123,479
Ensembl chrNW_004624735:34,104,537...34,123,624
JBrowse link
G Apoa1 apolipoprotein A1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:7900854 NCBI chrNW_004624784:12,249,283...12,251,215
Ensembl chrNW_004624784:12,249,283...12,251,136
JBrowse link
G Apoe apolipoprotein E ISO protein:increased expression:serum (rat) RGD PMID:22785171 RGD:6903854 NCBI chrNW_004624907:1,752,322...1,755,308 JBrowse link
G C3 complement C3 ISO CTD Direct Evidence: marker/mechanism CTD
RGD
PMID:10729746 PMID:25954969 RGD:5129563 NCBI chrNW_004624828:3,773,816...3,798,077
Ensembl chrNW_004624828:3,770,221...3,797,946
JBrowse link
G C7 complement C7 ISO RGD PMID:6241952 RGD:1599528 NCBI chrNW_004624759:13,991,104...14,114,271
Ensembl chrNW_004624759:13,992,681...14,114,411
JBrowse link
G Cd40 CD40 molecule treatment ISO RGD PMID:23223173 RGD:8547786 NCBI chrNW_004624790:8,475,640...8,485,927
Ensembl chrNW_004624790:8,476,158...8,485,856
JBrowse link
G Cd40lg CD40 ligand treatment ISO associated with Lupus Erythematosus, Systemic RGD PMID:7564113 PMID:17911451 RGD:7248430 RGD:7248720 NCBI chrNW_004624808:10,472,028...10,484,407
Ensembl chrNW_004624808:10,472,572...10,484,338
JBrowse link
G Cdkn1b cyclin dependent kinase inhibitor 1B treatment ISO RGD PMID:24583340 RGD:10045363 NCBI chrNW_004624752:25,202,474...25,207,107
Ensembl chrNW_004624752:25,203,474...25,207,114
JBrowse link
G Cfb complement factor B susceptibility ISO RGD PMID:3272818 RGD:7242764 NCBI chrNW_004624754:24,310,344...24,316,482
Ensembl chrNW_004624754:24,310,247...24,317,366
JBrowse link
G Cfh complement factor H ISO mRNA, protein:increased expression:glomerulus RGD PMID:12911541 RGD:1599888 NCBI chrNW_004624798:3,332,549...3,414,435 JBrowse link
G Gaa alpha glucosidase ISO CTD Direct Evidence: marker/mechanism CTD PMID:15466083 NCBI chrNW_004624801:9,217,633...9,235,931
Ensembl chrNW_004624801:9,217,639...9,235,931
JBrowse link
G Il1b interleukin 1 beta ISO RGD PMID:20588061 RGD:7175342 NCBI chrNW_004624749:12,852,128...12,858,478
Ensembl chrNW_004624749:12,852,021...12,858,760
JBrowse link
G LOC101719398 serotransferrin ISO associated with Lupus Erythematosus, Systemic RGD PMID:22328173 RGD:7244198 NCBI chrNW_004624730:10,078,165...10,109,349 JBrowse link
G Lrp2 LDL receptor related protein 2 ISO mRNA:decreased expression:glomerulus RGD PMID:10919857 RGD:1641827 NCBI chrNW_004624787:6,797,462...6,998,859
Ensembl chrNW_004624787:6,798,938...6,998,697
JBrowse link
G Lrpap1 LDL receptor related protein associated protein 1 ISO mRNA, protein:increased expression:glomerulus, epithelial cell RGD PMID:7723231 PMID:7778686 RGD:1641936 RGD:1641937 NCBI chrNW_004624755:24,436,128...24,447,923
Ensembl chrNW_004624755:24,436,208...24,449,147
JBrowse link
G Map3k5 mitogen-activated protein kinase kinase kinase 5 ISO protein:increased activity,protein:renal glomerulus: RGD PMID:18178252 RGD:10412641 NCBI chrNW_004624886:970,415...1,189,595
Ensembl chrNW_004624886:969,623...1,190,709
JBrowse link
G Mme membrane metalloendopeptidase ISO ClinVar Annotator: match by term: Congenital membranous nephropathy due to fetomaternal anti-neutral endopeptidase alloimmunization ClinVar PMID:15464186 PMID:24033266 PMID:25565308 PMID:25741868 PMID:26991897 More... NCBI chrNW_004624730:32,601,835...32,691,368
Ensembl chrNW_004624730:32,601,488...32,689,080
JBrowse link
G Mmp9 matrix metallopeptidase 9 ISO RGD PMID:8613533 RGD:8547919 NCBI chrNW_004624790:8,584,399...8,591,763
Ensembl chrNW_004624790:8,583,457...8,591,713
JBrowse link
G Nphs1 NPHS1 adhesion molecule, nephrin ISO RGD PMID:15882266 RGD:1598706 NCBI chrNW_004624794:10,117,464...10,138,511
Ensembl chrNW_004624794:10,116,777...10,135,963
JBrowse link
G Nphs2 NPHS2 stomatin family member, podocin ISO RGD PMID:15882266 RGD:1598706 NCBI chrNW_004624771:2,828,758...2,847,995
Ensembl chrNW_004624771:2,828,104...2,849,254
JBrowse link
G Nqo1 NAD(P)H quinone dehydrogenase 1 treatment ISO RGD PMID:28711658 RGD:13439719 NCBI chrNW_004624746:16,684,620...16,698,194
Ensembl chrNW_004624746:16,684,407...16,697,479
JBrowse link
G Ptger3 prostaglandin E receptor 3 ISO mRNA:increased expression:renal cortex (rat) RGD PMID:14636300 RGD:10043359 NCBI chrNW_004624742:25,177,340...25,356,911 JBrowse link
G Ptpru protein tyrosine phosphatase receptor type U ISO mRNA, protein:decreased expression:glomerulus RGD PMID:17457373 RGD:1642654 NCBI chrNW_004624764:12,994,562...13,072,723
Ensembl chrNW_004624764:12,994,521...13,073,251
JBrowse link
G Rhoa ras homolog family member A ISO protein:increased activity:epithelial cell RGD PMID:17376765 RGD:1642963 NCBI chrNW_004624730:3,316,122...3,361,820 JBrowse link
G Shh sonic hedgehog signaling molecule ISO RGD PMID:24744439 RGD:12859042 NCBI chrNW_004624800:2,202,986...2,215,309
Ensembl chrNW_004624800:2,203,393...2,212,068
JBrowse link
G Sparc secreted protein acidic and cysteine rich ISO protein:increased expression:kidney RGD PMID:8943481 RGD:2300069 NCBI chrNW_004624733:37,348,993...37,369,804
Ensembl chrNW_004624733:37,338,284...37,369,804
JBrowse link
G Tbxas1 thromboxane A synthase 1 ISO RGD PMID:8982653 RGD:1601473 NCBI chrNW_004624765:20,145,769...20,314,992
Ensembl chrNW_004624765:20,146,138...20,315,797
JBrowse link
mesangial proliferative glomerulonephritis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fbn1 fibrillin 1 ISO mRNA:increased expression:cortex of kidney RGD PMID:25482639 RGD:12910487 NCBI chrNW_004624731:11,086,240...11,318,111
Ensembl chrNW_004624731:11,086,844...11,318,102
JBrowse link
G Fgfr1 fibroblast growth factor receptor 1 ISO mRNA:increased expression:mesangial cell RGD PMID:10592054 RGD:10402100 NCBI chrNW_004624780:5,161,245...5,212,641
Ensembl chrNW_004624780:5,161,073...5,213,870
JBrowse link
G Gadd45g growth arrest and DNA damage inducible gamma ISO mRNA,protein:increased expression:kidney RGD PMID:16736195 RGD:14700866 NCBI chrNW_004624765:22,959,751...22,961,371
Ensembl chrNW_004624765:22,959,373...22,961,491
JBrowse link
G Itga8 integrin subunit alpha 8 ISO mRNA:increased expression:cortex of kidney RGD PMID:25482639 RGD:12910487 NCBI chrNW_004624796:11,908,927...12,103,806
Ensembl chrNW_004624796:11,908,964...12,101,139
JBrowse link
G Itgam integrin subunit alpha M exacerbates ISO RGD PMID:10623679 RGD:329901927 NCBI chrNW_004624782:14,316,505...14,367,841
Ensembl chrNW_004624782:14,318,499...14,367,922
JBrowse link
G Nr4a1 nuclear receptor subfamily 4 group A member 1 ISO mRNA,protein:increased expression:kidney RGD PMID:16736195 RGD:14700866 NCBI chrNW_004624816:271,345...288,265
Ensembl chrNW_004624816:267,303...293,227
JBrowse link
G Pdgfd platelet derived growth factor D treatment ISO mRNA,protein:increased expression:glomerulus,serum: RGD PMID:12937299 PMID:17308324 RGD:9854629 RGD:9854637 NCBI chrNW_004624918:1,052,640...1,293,138
Ensembl chrNW_004624918:1,052,567...1,293,192
JBrowse link
G Rapgef1 Rap guanine nucleotide exchange factor 1 ISO protein:increased expression:renal glomerulus RGD PMID:20725139 RGD:11534982 NCBI chrNW_004624760:4,376,733...4,474,834
Ensembl chrNW_004624760:4,376,713...4,474,837
JBrowse link
G Vwf von Willebrand factor ISO protein:increased expression:glomerulus: RGD PMID:10450036 RGD:11079208 NCBI chrNW_004624860:2,843,268...2,973,888
Ensembl chrNW_004624860:2,858,088...2,973,052
JBrowse link
nephrotic syndrome type 2 term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Anxa5 annexin A5 ISO protein:increased expression:urine RGD PMID:17999093 RGD:7242031 NCBI chrNW_004624777:1,921,354...1,969,772
Ensembl chrNW_004624777:1,919,602...1,970,059
JBrowse link
G Avil advillin ISO ClinVar Annotator: match by term: Steroid-resistant nephrotic syndrome ClinVar PMID:25741868 PMID:29058690 NCBI chrNW_004624802:10,134,518...10,154,274
Ensembl chrNW_004624802:10,134,556...10,154,324
JBrowse link
G Axdnd1 axonemal dynein light chain domain containing 1 ISO ClinVar Annotator: match by term: Nephrotic syndrome, type 2 | ClinVar Annotator: match by term: Nephrotic syndrome, type 2, susceptibility to | ClinVar Annotator: match by term: Steroid-resistant nephrotic syndrome ClinVar PMID:8589695 PMID:9536098 PMID:10742096 PMID:11805166 PMID:12464671 More... NCBI chrNW_004624771:2,824,853...2,985,997 JBrowse link
G Col4a3 collagen type IV alpha 3 chain ISO ClinVar Annotator: match by term: Steroid-resistant nephrotic syndrome ClinVar PMID:25741868 NCBI chrNW_004624843:1,557,756...1,623,936 JBrowse link
G Col4a4 collagen type IV alpha 4 chain ISO ClinVar Annotator: match by term: Steroid-resistant nephrotic syndrome ClinVar PMID:25741868 PMID:28492532 NCBI chrNW_004624843:1,364,674...1,486,813
Ensembl chrNW_004624843:1,364,674...1,486,250
JBrowse link
G Col4a5 collagen type IV alpha 5 chain ISO ClinVar Annotator: match by term: Steroid-resistant nephrotic syndrome ClinVar PMID:32581362 NCBI chrNW_004624803:7,509,877...7,916,365
Ensembl chrNW_004624803:7,511,041...7,916,031
JBrowse link
G Crb2 crumbs cell polarity complex component 2 ISO ClinVar Annotator: match by term: Steroid-resistant nephrotic syndrome ClinVar PMID:25557779 PMID:25741868 PMID:27004616 PMID:27942854 PMID:28492532 More... NCBI chrNW_004624760:11,576,683...11,598,354
Ensembl chrNW_004624760:11,579,163...11,598,287
JBrowse link
G Fat1 FAT atypical cadherin 1 ISO ClinVar Annotator: match by term: Familial idiopathic steroid-resistant nephrotic syndrome ClinVar PMID:25615407 PMID:25741868 PMID:26905694 PMID:30862798 NCBI chrNW_004624769:17,801,796...17,924,685
Ensembl chrNW_004624769:17,801,894...17,925,191
JBrowse link
G Nphs2 NPHS2 stomatin family member, podocin ISO ClinVar Annotator: match by term: NPHS2-related condition | ClinVar Annotator: match by term: Nephrotic syndrome, type 2 | ClinVar Annotator: match by term: Nephrotic syndrome, type 2, susceptibility to | ClinVar Annotator: match by term: Steroid-resistant nephrotic syndrome OMIM
ClinVar
PMID:1523708 PMID:8589695 PMID:8606597 PMID:9536098 PMID:10742096 More... NCBI chrNW_004624771:2,828,758...2,847,995
Ensembl chrNW_004624771:2,828,104...2,849,254
JBrowse link
G Nr3c1 nuclear receptor subfamily 3 group C member 1 ISO mRNA:alternative form:blood, mononuclear cell RGD PMID:20419394 RGD:7174729 NCBI chrNW_004624774:2,496,276...2,603,894
Ensembl chrNW_004624774:2,495,304...2,602,632
JBrowse link
G Nup205 nucleoporin 205 ISO CTD Direct Evidence: marker/mechanism CTD PMID:26878725 NCBI chrNW_004624765:15,845,163...15,936,840
Ensembl chrNW_004624765:15,857,942...15,936,678
JBrowse link
G Nup93 nucleoporin 93 ISO CTD Direct Evidence: marker/mechanism CTD PMID:26878725 NCBI chrNW_004624746:29,153,503...29,271,518
Ensembl chrNW_004624746:29,153,503...29,253,146
JBrowse link
G Pax2 paired box 2 ISO ClinVar Annotator: match by term: Steroid-resistant nephrotic syndrome ClinVar PMID:3377002 PMID:8589702 PMID:9106533 PMID:11093271 PMID:11241473 More... NCBI chrNW_004624831:375,851...453,968
Ensembl chrNW_004624831:375,866...453,930
JBrowse link
G Pla2g7 phospholipase A2 group VII disease_progression ISO RGD PMID:9853251 RGD:7248793 NCBI chrNW_004624754:13,905,084...13,932,366
Ensembl chrNW_004624754:13,904,797...13,931,670
JBrowse link
G Plce1 phospholipase C epsilon 1 ISO DNA:mutations: : RGD PMID:20591883 RGD:7257521 NCBI chrNW_004624737:5,309,157...5,699,384
Ensembl chrNW_004624737:5,343,570...5,695,284
JBrowse link
G Smarcal1 SNF2 related chromatin remodeling annealing helicase 1 ISO ClinVar Annotator: match by term: Steroid-resistant nephrotic syndrome ClinVar PMID:11799392 PMID:15880370 PMID:16840568 PMID:17089404 PMID:18805831 More... NCBI chrNW_004624823:8,645,340...8,708,039
Ensembl chrNW_004624823:8,644,826...8,706,591
JBrowse link
G Trpc6 transient receptor potential cation channel subfamily C member 6 ISO DNA:missense mutations, SNPs:exon, intron:multiple RGD PMID:21511817 RGD:7247446 NCBI chrNW_004624878:1,321,022...1,469,964
Ensembl chrNW_004624878:1,321,497...1,468,865
JBrowse link
G Tsfm Ts translation elongation factor, mitochondrial ISO ClinVar Annotator: match by term: Steroid-resistant nephrotic syndrome ClinVar PMID:25741868 PMID:29058690 NCBI chrNW_004624802:10,154,581...10,165,614
Ensembl chrNW_004624802:10,153,124...10,165,614
JBrowse link
G Wt1 WT1 transcription factor ISO ClinVar Annotator: match by term: Familial idiopathic steroid-resistant nephrotic syndrome | ClinVar Annotator: match by term: Steroid-resistant nephrotic syndrome ClinVar PMID:1302008 PMID:1327525 PMID:1338906 PMID:1655284 PMID:1658787 More... NCBI chrNW_004624766:20,899,546...20,937,084
Ensembl chrNW_004624766:20,900,676...20,937,202
JBrowse link
G Xpo5 exportin 5 ISO CTD Direct Evidence: marker/mechanism CTD PMID:26878725 NCBI chrNW_004624754:16,083,356...16,124,682
Ensembl chrNW_004624754:16,083,407...16,123,407
JBrowse link
nephrotic syndrome type 7 term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dgke diacylglycerol kinase epsilon ISO ClinVar Annotator: match by term: AHUS, SUSCEPTIBILITY TO, 7 | ClinVar Annotator: match by term: DGKE-related condition | ClinVar Annotator: match by term: Hemolytic uremic syndrome with DGKE deficiency | ClinVar Annotator: match by term: Immunoglobulin-mediated membranoproliferative glomerulonephritis | ClinVar Annotator: match by term: Nephrotic syndrome, type 7 OMIM
ClinVar
PMID:23274426 PMID:23542698 PMID:24747643 PMID:25135762 PMID:25349199 More... NCBI chrNW_004624795:11,908,738...11,934,403
Ensembl chrNW_004624795:11,908,793...11,933,125
JBrowse link
Salcedo Syndrome term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lmx1b LIM homeobox transcription factor 1 beta ISO ClinVar Annotator: match by term: Focal Segmental Glomerulosclerosis 10 | ClinVar Annotator: match by term: Nail-patella-like renal disease OMIM
ClinVar
PMID:23687361 PMID:24042019 PMID:25741868 PMID:26560070 PMID:28059119 More... NCBI chrNW_004624760:8,701,204...8,772,147
Ensembl chrNW_004624760:8,698,139...8,772,147
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  disease 14230
    disease of anatomical entity 13932
      Immune & Inflammatory Diseases 4774
        Inflammation 2294
          nephritis 373
            glomerulonephritis 328
              C1q Deficiency + 3
              IgA glomerulonephritis + 72
              Lymphopenic Hypergammaglobulinemia, Antibody Deficiency, Autoimmune Hemolytic Anemia, and Glomerulonephritis 0
              Marfanoid Habitus with Microcephaly and Glomerulonephritis 0
              acute poststreptococcal glomerulonephritis 0
              acute proliferative glomerulonephritis + 12
              anti-basement membrane glomerulonephritis 47
              chronic rapidly progressive glomerulonephritis 0
              diffuse glomerulonephritis + 0
              exudative glomerulonephritis 0
              focal embolic glomerulonephritis 0
              glomerulosclerosis + 133
              immune-complex glomerulonephritis 0
              lipoid nephrosis 7
              lupus nephritis 46
              membranous glomerulonephritis 28
              mesangial proliferative glomerulonephritis + 45
              proliferative glomerulonephritis 0
              rapidly progressive glomerulonephritis + 12
              subacute glomerulonephritis 0
Path 2
Term Annotations click to browse term
  disease 14230
    disease of anatomical entity 13932
      Urogenital Diseases 4530
        urinary system disease 2211
          kidney disease 1991
            nephritis 373
              glomerulonephritis 328
                C1q Deficiency + 3
                IgA glomerulonephritis + 72
                Lymphopenic Hypergammaglobulinemia, Antibody Deficiency, Autoimmune Hemolytic Anemia, and Glomerulonephritis 0
                Marfanoid Habitus with Microcephaly and Glomerulonephritis 0
                acute poststreptococcal glomerulonephritis 0
                acute proliferative glomerulonephritis + 12
                anti-basement membrane glomerulonephritis 47
                chronic rapidly progressive glomerulonephritis 0
                diffuse glomerulonephritis + 0
                exudative glomerulonephritis 0
                focal embolic glomerulonephritis 0
                glomerulosclerosis + 133
                immune-complex glomerulonephritis 0
                lipoid nephrosis 7
                lupus nephritis 46
                membranous glomerulonephritis 28
                mesangial proliferative glomerulonephritis + 45
                proliferative glomerulonephritis 0
                rapidly progressive glomerulonephritis + 12
                subacute glomerulonephritis 0
paths to the root