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RGD DISEASE ONTOLOGY - ANNOTATIONS

RGD uses the Human Disease Ontology (DO, https://disease-ontology.org/) for disease curation across species. RGD automatically downloads each new release of the ontology on a monthly basis. Some additional terms which are required for RGD's curation purposes but are not currently covered in the official version of DO have been added. As corresponding terms are added to DO, these custom terms are retired and the DO terms substituted in existing annotations and subsequently used for curation.

Term:glomerulonephritis
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Accession:DOID:2921 term browser browse the term
Definition:A nephritis that causes inflammation of the glomeruli located_in kidney. (DO)
Synonyms:exact_synonym: Bright Disease;   Glomerulonephritides
 related_synonym: Primary Glomerulonephritis
 primary_id: MESH:D005921
 xref: GARD:6516;   MONDO:0002462;   NCI:C26784
For additional species annotation, visit the Alliance of Genome Resources.



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glomerulonephritis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACE angiotensin I converting enzyme ISO RGD PMID:19164508 RGD:2325229 NCBI chr17:63,477,061...63,498,373
Ensembl chr17:63,477,061...63,498,380
JBrowse link
G ADM adrenomedullin ISO
EXP
CTD Direct Evidence: marker/mechanism
associated with Anti-Glomerular Basement Membrane Disease
CTD
RGD
PMID:15063164 PMID:15680492 PMID:20431304 PMID:16735801 RGD:2325320, RGD:1625317 NCBI chr11:10,305,073...10,307,397
Ensembl chr11:10,305,073...10,307,397
JBrowse link
G AGT angiotensinogen disease_progression ISO
EXP
CTD Direct Evidence: marker/mechanism CTD
RGD
PMID:11459117 PMID:15888567 RGD:13432360 NCBI chr 1:230,702,523...230,745,583
Ensembl chr 1:230,690,776...230,745,576
JBrowse link
G AGTR2 angiotensin II receptor type 2 ISO RGD PMID:19139720 RGD:6903845 NCBI chr  X:116,170,744...116,174,974
Ensembl chr  X:116,170,744...116,174,974
JBrowse link
G AIF1 allograft inflammatory factor 1 ISO protein:increased expression:kidney (rat) RGD PMID:17035944 RGD:2313038 NCBI chr 6:31,615,234...31,617,015
Ensembl chr 6:31,615,217...31,617,021
JBrowse link
G ALB albumin EXP CTD Direct Evidence: marker/mechanism CTD PMID:3160244 PMID:6343549 PMID:6769622 PMID:8501856 PMID:17161813 More... NCBI chr 4:73,404,287...73,421,482
Ensembl chr 4:73,397,114...73,421,482
JBrowse link
G ALOX15 arachidonate 15-lipoxygenase ISO RGD PMID:7967345 RGD:5128564 NCBI chr17:4,630,919...4,641,678
Ensembl chr17:4,630,919...4,642,294
JBrowse link
G ALOX5AP arachidonate 5-lipoxygenase activating protein onset ISO protein:increased expression:glomerulus, endothelial cell, cytoplasm (rat) RGD PMID:14733414 RGD:2313931 NCBI chr13:30,713,485...30,764,426
Ensembl chr13:30,713,478...30,764,426
JBrowse link
G ANXA5 annexin A5 ISO RGD PMID:11271515 RGD:7241853 NCBI chr 4:121,667,946...121,696,980
Ensembl chr 4:121,667,946...121,696,995
JBrowse link
G APOE apolipoprotein E ISO Apoe(-/-) Id3(-/-) double knockout RGD PMID:21801865 RGD:6903286 NCBI chr19:44,905,796...44,909,393
Ensembl chr19:44,905,791...44,909,393
JBrowse link
G APOL1 apolipoprotein L1 IAGP ClinVar Annotator: match by term: Glomerulonephritis ClinVar PMID:20635188 PMID:20647424 PMID:20668430 PMID:21997394 PMID:24033266 More... NCBI chr22:36,253,133...36,267,525
Ensembl chr22:36,253,071...36,267,530
JBrowse link
G AXL AXL receptor tyrosine kinase ISO RGD PMID:11290560 RGD:1579882 NCBI chr19:41,219,223...41,261,766
Ensembl chr19:41,219,223...41,261,766
JBrowse link
G BCL2L11 BCL2 like 11 ISO RGD PMID:10576740 RGD:734641 NCBI chr 2:111,120,914...111,168,445
Ensembl chr 2:111,119,378...111,168,444
JBrowse link
G BDKRB1 bradykinin receptor B1 IEP RGD PMID:20448019 RGD:7241551 NCBI chr14:96,256,210...96,264,763
Ensembl chr14:96,256,210...96,268,967
JBrowse link
G C1QA complement C1q A chain susceptibility IAGP DNA:nonsense mutation (human) RGD PMID:8840296 RGD:1600549 NCBI chr 1:22,636,463...22,639,678
Ensembl chr 1:22,635,077...22,639,678
JBrowse link
G C3 complement C3 ISO RGD PMID:11950907 RGD:5129550 NCBI chr19:6,677,704...6,720,650
Ensembl chr19:6,677,704...6,730,562
JBrowse link
G C6 complement C6 ISO RGD PMID:10807586 RGD:1600489 NCBI chr 5:41,142,116...41,261,469
Ensembl chr 5:41,142,116...41,261,438
JBrowse link
G CCL1 C-C motif chemokine ligand 1 ISO
EXP
CTD Direct Evidence: marker/mechanism CTD
RGD
PMID:10385480 PMID:11157384 RGD:8693624 NCBI chr17:34,360,328...34,363,233
Ensembl chr17:34,360,328...34,363,233
JBrowse link
G CCL2 C-C motif chemokine ligand 2 EXP CTD Direct Evidence: marker/mechanism CTD PMID:10385480 NCBI chr17:34,255,285...34,257,203
Ensembl chr17:34,255,274...34,257,208
JBrowse link
G CCL3 C-C motif chemokine ligand 3 ISO
EXP
CTD Direct Evidence: marker/mechanism CTD
RGD
PMID:10385480 PMID:18941245 RGD:7241804 NCBI chr17:36,088,256...36,090,143
Ensembl chr17:36,088,256...36,090,169
JBrowse link
G CCL4 C-C motif chemokine ligand 4 EXP CTD Direct Evidence: marker/mechanism CTD PMID:10385480 NCBI chr17:36,103,827...36,105,614
Ensembl chr17:36,103,827...36,105,621
JBrowse link
G CCL5 C-C motif chemokine ligand 5 EXP CTD Direct Evidence: marker/mechanism CTD PMID:10385480 NCBI chr17:35,871,491...35,880,360
Ensembl chr17:35,871,491...35,880,793
JBrowse link
G CCL7 C-C motif chemokine ligand 7 ISO
EXP
CTD Direct Evidence: marker/mechanism CTD
RGD
PMID:10385480 PMID:11157384 RGD:8693624 NCBI chr17:34,270,221...34,272,242
Ensembl chr17:34,270,221...34,272,242
JBrowse link
G CD163 CD163 molecule IEP associated with liver disease;protein:increased expression:blood serum (human) RGD PMID:26339412 RGD:11251207 NCBI chr12:7,470,811...7,503,777
Ensembl chr12:7,470,811...7,503,893
JBrowse link
G CD59 CD59 molecule (CD59 blood group) ISO RGD PMID:7523753 RGD:1600500 NCBI chr11:33,703,010...33,736,479
Ensembl chr11:33,703,010...33,736,479
JBrowse link
G CFD complement factor D EXP CTD Direct Evidence: marker/mechanism CTD PMID:14675043 NCBI chr19:859,664...863,641
Ensembl chr19:859,453...867,884
JBrowse link
G CFH complement factor H ISO RGD PMID:17344423 RGD:7365002 NCBI chr 1:196,652,043...196,747,504
Ensembl chr 1:196,651,754...196,752,476
JBrowse link
G CFI complement factor I ISS MouseDO NCBI chr 4:109,730,982...109,801,999
Ensembl chr 4:109,731,008...109,802,150
JBrowse link
G CNDP1 carnosine dipeptidase 1 IAGP RGD PMID:20851293 RGD:7207223 NCBI chr18:74,534,500...74,587,212
Ensembl chr18:74,534,500...74,587,212
JBrowse link
G COL4A3 collagen type IV alpha 3 chain ISO RGD PMID:11158397 RGD:1600928 NCBI chr 2:227,164,624...227,314,792
Ensembl chr 2:227,164,624...227,314,792
JBrowse link
G COL4A4 collagen type IV alpha 4 chain IAGP ClinVar Annotator: match by term: Glomerulonephritis ClinVar PMID:12028435 PMID:12325029 PMID:16467446 PMID:17216251 PMID:17942953 More... NCBI chr 2:226,967,360...227,164,488
Ensembl chr 2:227,002,714...227,164,453
JBrowse link
G CPB2 carboxypeptidase B2 ISO RGD PMID:18612543 RGD:7243117 NCBI chr13:46,053,186...46,105,033
Ensembl chr13:46,053,186...46,105,033
JBrowse link
G CSF1 colony stimulating factor 1 IEP RGD PMID:11477167 RGD:7257579 NCBI chr 1:109,910,506...109,930,992
Ensembl chr 1:109,910,242...109,930,992
JBrowse link
G CX3CL1 C-X3-C motif chemokine ligand 1 ISO mRNA, protein:increased expression:glomerulus, urine RGD PMID:14605272 RGD:4891995 NCBI chr16:57,372,490...57,385,044
Ensembl chr16:57,372,477...57,385,044
JBrowse link
G CX3CR1 C-X3-C motif chemokine receptor 1 ISO mRNA:increased expression:glomerulus RGD PMID:14605272 PMID:10432400 RGD:4891995, RGD:4892027 NCBI chr 3:39,263,494...39,292,966
Ensembl chr 3:39,263,495...39,281,735
JBrowse link
G CXCL8 C-X-C motif chemokine ligand 8 EXP CTD Direct Evidence: marker/mechanism CTD PMID:9403216 PMID:10910440 NCBI chr 4:73,740,569...73,743,716
Ensembl chr 4:73,740,519...73,743,716
JBrowse link
G CXCR3 C-X-C motif chemokine receptor 3 EXP CTD Direct Evidence: marker/mechanism CTD PMID:12517959 NCBI chr  X:71,615,919...71,618,511
Ensembl chr  X:71,615,916...71,618,511
JBrowse link
G DES desmin EXP CTD Direct Evidence: marker/mechanism CTD PMID:20962747 NCBI chr 2:219,418,377...219,426,734
Ensembl chr 2:219,418,377...219,426,735
JBrowse link
G ELANE elastase, neutrophil expressed ISO RGD PMID:19752320 RGD:6907051 NCBI chr19:852,303...856,243
Ensembl chr19:851,014...856,247
JBrowse link
G EP300 E1A binding protein p300 IEP protein:increased expression:glomerulus, renal tubule (human) RGD PMID:17125594 RGD:7327154 NCBI chr22:41,092,592...41,180,077
Ensembl chr22:41,092,510...41,180,077
JBrowse link
G ESR1 estrogen receptor 1 EXP CTD Direct Evidence: marker/mechanism CTD PMID:20962747 NCBI chr 6:151,656,672...152,129,619
Ensembl chr 6:151,656,691...152,129,619
JBrowse link
G F2 coagulation factor II, thrombin IDA
IEP
protein:increased expression;urine RGD PMID:17519558 PMID:15164604 RGD:6893586, RGD:6893593 NCBI chr11:46,719,213...46,739,506
Ensembl chr11:46,719,196...46,739,506
JBrowse link
G FAS Fas cell surface death receptor treatment ISO
EXP
CTD Direct Evidence: marker/mechanism CTD
RGD
PMID:21880982 PMID:36999444 PMID:9466307 RGD:8686428 NCBI chr10:88,964,050...89,017,059
Ensembl chr10:88,953,813...89,029,605
JBrowse link
G FBN1 fibrillin 1 ISO mRNA:increased expression:renal cortex, renal glomerulus (rat)
mRNA, protein:increased expression:renal glomerulus (rat)
RGD PMID:16395273 PMID:16282705 RGD:7365077, RGD:7387262 NCBI chr15:48,408,313...48,645,709
Ensembl chr15:48,408,313...48,645,721
JBrowse link
G FCGR2A Fc gamma receptor IIa ISO RGD PMID:19050295 RGD:5508439 NCBI chr 1:161,505,457...161,524,048
Ensembl chr 1:161,505,430...161,524,013
JBrowse link
G FCGR2B Fc gamma receptor IIb IAGP RGD PMID:19640933 RGD:5508403 NCBI chr 1:161,647,243...161,678,654
Ensembl chr 1:161,663,143...161,678,654
JBrowse link
G FCGR3A Fc gamma receptor IIIa ISO RGD PMID:19050295 RGD:5508439 NCBI chr 1:161,541,759...161,550,737
Ensembl chr 1:161,541,759...161,550,968
JBrowse link
G FN1 fibronectin 1 disease_progression IEP RGD PMID:20484935 RGD:7206839 NCBI chr 2:215,360,865...215,436,068
Ensembl chr 2:215,360,440...215,436,073
JBrowse link
G FOS Fos proto-oncogene, AP-1 transcription factor subunit treatment ISO RGD PMID:11880336 PMID:31821871 RGD:7242278, RGD:405650596 NCBI chr14:75,278,828...75,282,230
Ensembl chr14:75,278,826...75,283,190
JBrowse link
G GAS6 growth arrest specific 6 ISO RGD PMID:11290560 RGD:1579882 NCBI chr13:113,820,549...113,864,076
Ensembl chr13:113,820,549...113,864,076
JBrowse link
G GDNF glial cell derived neurotrophic factor treatment IMP RGD PMID:22105543 RGD:405866361 NCBI chr 5:37,812,677...37,840,041
Ensembl chr 5:37,812,677...37,840,041
JBrowse link
G GJA5 gap junction protein alpha 5 ISO RGD PMID:22945766 RGD:7207390 NCBI chr 1:147,756,199...147,773,351
Ensembl chr 1:147,756,199...147,773,362
JBrowse link
G IFNG interferon gamma ISO
EXP
IEP
CTD Direct Evidence: marker/mechanism
associated with kidney transplantation;mRNA:increased expression:kidney
CTD
RGD
PMID:1825860 PMID:22495297 PMID:21546865 RGD:6893377, RGD:6893462 NCBI chr12:68,154,768...68,159,740
Ensembl chr12:68,154,768...68,159,740
JBrowse link
G IL10 interleukin 10 EXP CTD Direct Evidence: marker/mechanism CTD PMID:10910440 NCBI chr 1:206,767,602...206,772,494
Ensembl chr 1:206,767,602...206,774,541
JBrowse link
G IL18 interleukin 18 EXP CTD Direct Evidence: therapeutic CTD PMID:18462998 NCBI chr11:112,143,260...112,164,094
Ensembl chr11:112,143,251...112,164,096
JBrowse link
G IL1A interleukin 1 alpha ISO associated with Malaria RGD PMID:10469263 RGD:6907108 NCBI chr 2:112,773,925...112,784,493
Ensembl chr 2:112,773,925...112,784,493
JBrowse link
G IL1B interleukin 1 beta EXP CTD Direct Evidence: marker/mechanism CTD PMID:9403216 PMID:10910440 NCBI chr 2:112,829,751...112,836,779
Ensembl chr 2:112,829,751...112,836,816
JBrowse link
G IL1R1 interleukin 1 receptor type 1 ISO RGD PMID:17500042 RGD:7207036 NCBI chr 2:102,070,390...102,179,874
Ensembl chr 2:102,064,544...102,179,874
JBrowse link
G IL1RN interleukin 1 receptor antagonist IDA
ISO
mouse model treated with human protein
mRNA:increased expression:kidney (mouse)
RGD PMID:22241891 PMID:21304992 RGD:6906885, RGD:6906960 NCBI chr 2:113,099,360...113,134,014
Ensembl chr 2:113,099,315...113,134,016
JBrowse link
G IL2 interleukin 2 EXP CTD Direct Evidence: marker/mechanism CTD PMID:9403216 PMID:10910440 NCBI chr 4:122,451,470...122,456,725
Ensembl chr 4:122,451,470...122,456,725
JBrowse link
G IL2RA interleukin 2 receptor subunit alpha EXP CTD Direct Evidence: marker/mechanism CTD PMID:10910440 NCBI chr10:6,010,689...6,062,367
Ensembl chr10:6,010,689...6,062,370
JBrowse link
G IL6 interleukin 6 EXP CTD Direct Evidence: marker/mechanism CTD PMID:9403216 NCBI chr 7:22,727,200...22,731,998
Ensembl chr 7:22,725,884...22,732,002
JBrowse link
G INF2 inverted formin 2 IAGP ClinVar Annotator: match by term: Glomerulonephritis ClinVar PMID:25741868 PMID:28492532 NCBI chr14:104,681,133...104,722,535
Ensembl chr14:104,681,146...104,722,535
JBrowse link
G ITGA3 integrin subunit alpha 3 ISO protein:decreased expression:glomerulus (rat) RGD PMID:19662603 RGD:2325666 NCBI chr17:50,056,110...50,090,481
Ensembl chr17:50,055,968...50,090,481
JBrowse link
G ITGAM integrin subunit alpha M ISO RGD PMID:19752320 RGD:6907051 NCBI chr16:31,259,975...31,332,877
Ensembl chr16:31,259,967...31,332,892
JBrowse link
G ITGB1 integrin subunit beta 1 ISO protein:decreased expression:glomerulus (rat) RGD PMID:19662603 RGD:2325666 NCBI chr10:32,900,318...32,958,230
Ensembl chr10:32,887,273...33,005,792
JBrowse link
G ITGB2 integrin subunit beta 2 ISO RGD PMID:19752320 PMID:15277234 RGD:6907051, RGD:6907066 NCBI chr21:44,885,953...44,928,815
Ensembl chr21:44,885,953...44,931,989
JBrowse link
G ITGB3 integrin subunit beta 3 IEP
ISO
RGD PMID:11051455 PMID:8083378 RGD:6907411, RGD:6907420 NCBI chr17:47,253,827...47,313,743
Ensembl chr17:47,253,827...47,313,743
JBrowse link
G JUND JunD proto-oncogene, AP-1 transcription factor subunit EXP CTD Direct Evidence: marker/mechanism CTD PMID:18443593 NCBI chr19:18,279,694...18,281,622
Ensembl chr19:18,279,694...18,281,622
JBrowse link
G KLKB1 kallikrein B1 IEP protein:increased expression:plasma: RGD PMID:2173275 RGD:7327152 NCBI chr 4:186,210,853...186,258,471
Ensembl chr 4:186,226,438...186,258,471
JBrowse link
G LAMB2 laminin subunit beta 2 IAGP ClinVar Annotator: match by term: Glomerulonephritis ClinVar PMID:25741868 PMID:28492532 NCBI chr 3:49,121,114...49,133,050
Ensembl chr 3:49,121,114...49,133,118
JBrowse link
G LTBP1 latent transforming growth factor beta binding protein 1 ISO RGD PMID:16282705 RGD:7387262 NCBI chr 2:32,946,953...33,399,509
Ensembl chr 2:32,946,953...33,399,509
JBrowse link
G LTC4S leukotriene C4 synthase ISO protein:altered activity:kidney, cortex (rat) RGD PMID:7827126 RGD:2316641 NCBI chr 5:179,793,986...179,796,647
Ensembl chr 5:179,793,980...179,796,647
JBrowse link
G MAPK1 mitogen-activated protein kinase 1 ISO RGD PMID:20203158 RGD:7243972 NCBI chr22:21,759,657...21,867,680
Ensembl chr22:21,759,657...21,867,680
JBrowse link
G MIR100 microRNA 100 EXP CTD Direct Evidence: marker/mechanism CTD PMID:25758243 NCBI chr11:122,152,229...122,152,308
Ensembl chr11:122,152,229...122,152,308
JBrowse link
G MIR10B microRNA 10b EXP CTD Direct Evidence: marker/mechanism CTD PMID:25758243 NCBI chr 2:176,150,303...176,150,412
Ensembl chr 2:176,150,303...176,150,412
JBrowse link
G MMP3 matrix metallopeptidase 3 IEP
ISO
RGD PMID:15034162 PMID:23224597 RGD:7241253, RGD:8694105 NCBI chr11:102,835,801...102,843,609
Ensembl chr11:102,835,801...102,843,609
JBrowse link
G MPO myeloperoxidase disease_progression ISO
IEP
RGD PMID:17267745 PMID:19238910 RGD:7174702, RGD:7174705 NCBI chr17:58,269,855...58,280,935
Ensembl chr17:58,269,855...58,280,935
JBrowse link
G MS4A1 membrane spanning 4-domains A1 ISO protein:increased expression:kidney, glomerulus (rat) RGD PMID:7538648 RGD:2316995 NCBI chr11:60,455,847...60,470,752
Ensembl chr11:60,455,846...60,470,752
JBrowse link
G MTHFR methylenetetrahydrofolate reductase IAGP DNA:transition:cds:g.677C>T (human) RGD PMID:22111818 RGD:6893468 NCBI chr 1:11,785,723...11,805,964
Ensembl chr 1:11,785,723...11,806,455
JBrowse link
G MYH9 myosin heavy chain 9 IAGP ClinVar Annotator: match by term: Glomerulonephritis ClinVar PMID:25741868 PMID:28492532 NCBI chr22:36,281,280...36,387,967
Ensembl chr22:36,281,280...36,388,010
JBrowse link
G NGF nerve growth factor IEP
EXP
protein:increased expression:serum
CTD Direct Evidence: marker/mechanism
CTD
RGD
PMID:24244623 PMID:19169037 RGD:7242783 NCBI chr 1:115,285,917...115,338,249
Ensembl chr 1:115,285,904...115,338,770
JBrowse link
G NPHS1 NPHS1 adhesion molecule, nephrin EXP
IAGP
CTD Direct Evidence: marker/mechanism
ClinVar Annotator: match by term: Glomerulonephritis
CTD
ClinVar
PMID:11337370 PMID:20962747 PMID:25741868 NCBI chr19:35,825,372...35,852,504
Ensembl chr19:35,825,372...35,869,287
JBrowse link
G NPPA natriuretic peptide A IEP associated with Streptococcal Infections;protein:increased expression:plasma RGD PMID:12654066 RGD:7248663 NCBI chr 1:11,845,709...11,847,783
Ensembl chr 1:11,845,709...11,848,345
JBrowse link
G PARP1 poly(ADP-ribose) polymerase 1 severity ISO RGD PMID:19454727 RGD:5684011 NCBI chr 1:226,360,691...226,408,093
Ensembl chr 1:226,360,210...226,408,154
JBrowse link
G PDGFB platelet derived growth factor subunit B treatment ISO RGD PMID:11316849 RGD:10449490 NCBI chr22:39,223,359...39,244,982
Ensembl chr22:39,223,359...39,244,982
JBrowse link
G PDGFD platelet derived growth factor D ISO RGD PMID:21866094 RGD:9854633 NCBI chr11:103,907,189...104,164,147
Ensembl chr11:103,907,189...104,164,379
JBrowse link
G PLA2G7 phospholipase A2 group VII IEP RGD PMID:8730430 RGD:7248794 NCBI chr 6:46,704,201...46,735,721
Ensembl chr 6:46,704,201...46,735,693
JBrowse link
G PLCE1 phospholipase C epsilon 1 IAGP ClinVar Annotator: match by term: Glomerulonephritis ClinVar PMID:25741868 NCBI chr10:93,993,931...94,332,823
Ensembl chr10:93,993,931...94,332,823
JBrowse link
G POMC proopiomelanocortin EXP CTD Direct Evidence: marker/mechanism CTD PMID:4368615 PMID:6300362 NCBI chr 2:25,160,860...25,168,580
Ensembl chr 2:25,160,853...25,168,903
JBrowse link
G PPARG peroxisome proliferator activated receptor gamma EXP CTD Direct Evidence: therapeutic CTD PMID:11318962 NCBI chr 3:12,287,368...12,434,344
Ensembl chr 3:12,287,368...12,434,356
JBrowse link
G PRF1 perforin 1 ISO RGD PMID:17622272 RGD:6482824 NCBI chr10:70,597,348...70,602,741
Ensembl chr10:70,597,348...70,602,759
JBrowse link
G PTAFR platelet activating factor receptor treatment ISO RGD PMID:1668710 RGD:10041057 NCBI chr 1:28,147,166...28,193,856
Ensembl chr 1:28,147,166...28,193,936
JBrowse link
G PTK2B protein tyrosine kinase 2 beta IEP protein:increased expression:glomerulus RGD PMID:11774117 RGD:729912 NCBI chr 8:27,310,506...27,459,391
Ensembl chr 8:27,311,482...27,459,391
JBrowse link
G SCGB1A1 secretoglobin family 1A member 1 IDA recombinant human SCGB1A1 in "experimental crescentic glomerulonephritis" model (mice) RGD PMID:18558621 RGD:6903251 NCBI chr11:62,419,033...62,423,195
Ensembl chr11:62,405,103...62,423,195
JBrowse link
G SERPINE1 serpin family E member 1 treatment IMP RGD PMID:12897205 RGD:13208810 NCBI chr 7:101,127,104...101,139,247
Ensembl chr 7:101,127,104...101,139,247
JBrowse link
G SMAD1 SMAD family member 1 ISO protein:increased phosphorylation:glomerulus RGD PMID:15591053 RGD:1643235 NCBI chr 4:145,480,770...145,559,176
Ensembl chr 4:145,481,194...145,559,176
JBrowse link
G SPP1 secreted phosphoprotein 1 disease_progression ISO RGD PMID:20720406 RGD:6903272 NCBI chr 4:87,975,714...87,983,411
Ensembl chr 4:87,975,667...87,983,532
JBrowse link
G TBXAS1 thromboxane A synthase 1 ISO RGD PMID:10560941 RGD:1601461 NCBI chr 7:139,778,242...140,020,293
Ensembl chr 7:139,777,051...140,020,325
JBrowse link
G TF transferrin severity IEP RGD PMID:22607047 RGD:7244194 NCBI chr 3:133,661,998...133,796,641
Ensembl chr 3:133,746,040...133,796,641
JBrowse link
G TLR2 toll like receptor 2 ISO RGD PMID:16849506 RGD:7241071 NCBI chr 4:153,684,280...153,710,637
Ensembl chr 4:153,684,050...153,706,260
JBrowse link
G TLR4 toll like receptor 4 ISO RGD PMID:20844472 PMID:16849506 RGD:4144104, RGD:7241071 NCBI chr 9:117,704,403...117,724,735
Ensembl chr 9:117,704,175...117,724,735
JBrowse link
G TNF tumor necrosis factor EXP CTD Direct Evidence: marker/mechanism CTD PMID:9403216 PMID:10910440 NCBI chr 6:31,575,565...31,578,336
Ensembl chr 6:31,575,565...31,578,336
JBrowse link
G TNFRSF1A TNF receptor superfamily member 1A disease_progression
treatment
IEP protein:increased expression:urine RGD PMID:20525973 PMID:23400706 RGD:7245516, RGD:7245540 NCBI chr12:6,328,771...6,342,076
Ensembl chr12:6,328,757...6,342,114
JBrowse link
G TNFRSF1B TNF receptor superfamily member 1B treatment ISO
IEP
RGD PMID:15841213 PMID:22449555 PMID:23400706 RGD:7245530, RGD:7245546, RGD:7245540 NCBI chr 1:12,166,991...12,209,220
Ensembl chr 1:12,166,991...12,209,228
JBrowse link
G TPO thyroid peroxidase IDA RGD PMID:8393543 RGD:7207483 NCBI chr 2:1,374,047...1,543,673
Ensembl chr 2:1,374,066...1,543,711
JBrowse link
G VCAM1 vascular cell adhesion molecule 1 IEP protein:increased expression:kidney RGD PMID:18574676 RGD:7241215 NCBI chr 1:100,719,742...100,739,045
Ensembl chr 1:100,719,742...100,739,045
JBrowse link
G VEGFA vascular endothelial growth factor A treatment IDA RGD PMID:15195119 RGD:7421594 NCBI chr 6:43,770,211...43,786,487
Ensembl chr 6:43,770,184...43,786,487
JBrowse link
G WT1 WT1 transcription factor EXP CTD Direct Evidence: marker/mechanism CTD PMID:20962747 NCBI chr11:32,387,775...32,435,539
Ensembl chr11:32,387,775...32,435,564
JBrowse link
anti-basement membrane glomerulonephritis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AGT angiotensinogen ISO protein:increased expression:kidney, urine
mRNA, protein:increased expression:liver, plasma
RGD PMID:21282555 PMID:7550093 RGD:5129185, RGD:11039051 NCBI chr 1:230,702,523...230,745,583
Ensembl chr 1:230,690,776...230,745,576
JBrowse link
G AGTR1 angiotensin II receptor type 1 ISO protein:increased expression:kidney RGD PMID:21282555 RGD:5129185 NCBI chr 3:148,697,903...148,743,003
Ensembl chr 3:148,697,784...148,743,008
JBrowse link
G BAX BCL2 associated X, apoptosis regulator ISO mRNA, protein:increased expression:kidney RGD PMID:12234300 RGD:1579984 NCBI chr19:48,954,875...48,961,798
Ensembl chr19:48,954,815...48,961,798
JBrowse link
G BCL2 BCL2 apoptosis regulator ISO mRNA, protein:decreased expression:kidney RGD PMID:12234300 RGD:1579984 NCBI chr18:63,123,346...63,320,090
Ensembl chr18:63,123,346...63,320,128
JBrowse link
G CCL17 C-C motif chemokine ligand 17 ISO mRNA:increased expression:glomerulus RGD PMID:20071465 RGD:4145614 NCBI chr16:57,396,093...57,416,063
Ensembl chr16:57,404,767...57,416,063
JBrowse link
G CCL2 C-C motif chemokine ligand 2 treatment ISO mRNA:increased expression:glomerulus RGD PMID:21894146 PMID:20071465 PMID:17898087 RGD:6218988, RGD:4145614, RGD:2307059 NCBI chr17:34,255,285...34,257,203
Ensembl chr17:34,255,274...34,257,208
JBrowse link
G CCL22 C-C motif chemokine ligand 22 ISO mRNA, protein:increased expression:glomerulus RGD PMID:12651599 RGD:2306306 NCBI chr16:57,357,909...57,366,189
Ensembl chr16:57,358,783...57,366,189
JBrowse link
G CCL4 C-C motif chemokine ligand 4 ISO mRNA:increased expression:glomerulus RGD PMID:17898087 RGD:2307059 NCBI chr17:36,103,827...36,105,614
Ensembl chr17:36,103,827...36,105,621
JBrowse link
G CCL5 C-C motif chemokine ligand 5 ISO mRNA:increased expression:glomerulus RGD PMID:17898087 RGD:2307059 NCBI chr17:35,871,491...35,880,360
Ensembl chr17:35,871,491...35,880,793
JBrowse link
G CD274 CD274 molecule treatment ISO RGD PMID:21965585 RGD:7248671 NCBI chr 9:5,450,542...5,470,554
Ensembl chr 9:5,450,503...5,470,566
JBrowse link
G CD40 CD40 molecule ISO RGD PMID:15210767 RGD:7248442 NCBI chr20:46,118,314...46,129,858
Ensembl chr20:46,118,271...46,129,863
JBrowse link
G CD40LG CD40 ligand ISO RGD PMID:15458437 RGD:5508170 NCBI chr  X:136,648,158...136,660,390
Ensembl chr  X:136,648,158...136,660,390
JBrowse link
G CD80 CD80 molecule ISO RGD PMID:10712436 RGD:6902936 NCBI chr 3:119,524,293...119,559,614
Ensembl chr 3:119,524,293...119,559,614
JBrowse link
G CFB complement factor B ISO RGD PMID:22492944 RGD:7242700 NCBI chr 6:31,946,095...31,952,084
Ensembl chr 6:31,945,650...31,952,086
JBrowse link
G CLU clusterin ISO protein:increased expression:urine RGD PMID:23791361 RGD:9068422 NCBI chr 8:27,596,917...27,614,700
Ensembl chr 8:27,596,917...27,614,700
JBrowse link
G CSF1 colony stimulating factor 1 treatment ISO RGD PMID:19242505 RGD:7257569 NCBI chr 1:109,910,506...109,930,992
Ensembl chr 1:109,910,242...109,930,992
JBrowse link
G CSF1R colony stimulating factor 1 receptor treatment
ameliorates
ISO RGD PMID:19242505 PMID:21519331 RGD:7257569, RGD:151665824 NCBI chr 5:150,053,295...150,113,365
Ensembl chr 5:150,053,291...150,113,372
JBrowse link
G CTLA4 cytotoxic T-lymphocyte associated protein 4 treatment IMP
IDA
ISO
RGD PMID:10712436 PMID:8206086 PMID:10712436 RGD:6902936, RGD:11352257, RGD:6902936 NCBI chr 2:203,867,771...203,873,965
Ensembl chr 2:203,853,888...203,873,965
JBrowse link
G CX3CL1 C-X3-C motif chemokine ligand 1 ISO mRNA, protein:increased expression:glomerulus RGD PMID:19590241 RGD:4891946 NCBI chr16:57,372,490...57,385,044
Ensembl chr16:57,372,477...57,385,044
JBrowse link
G CX3CR1 C-X3-C motif chemokine receptor 1 ISO mRNA, protein:increased expression:glomerulus RGD PMID:19590241 RGD:4891946 NCBI chr 3:39,263,494...39,292,966
Ensembl chr 3:39,263,495...39,281,735
JBrowse link
G CXCL12 C-X-C motif chemokine ligand 12 ISO mRNA:increased expression:glomerulus RGD PMID:17557270 RGD:2306579 NCBI chr10:44,370,165...44,385,097
Ensembl chr10:44,370,165...44,386,493
JBrowse link
G DUSP1 dual specificity phosphatase 1 ISO mRNA:increased expression:glomerulus RGD PMID:8587253 RGD:633769 NCBI chr 5:172,768,096...172,771,195
Ensembl chr 5:172,768,096...172,771,195
JBrowse link
G FCGR3A Fc gamma receptor IIIa no_association IAGP DNA:cnv: :
DNA:polymorphism:exon:(rs396991)(human)
RGD PMID:19946017 PMID:19640933 RGD:5508400, RGD:5508403 NCBI chr 1:161,541,759...161,550,737
Ensembl chr 1:161,541,759...161,550,968
JBrowse link
G GP6 glycoprotein VI platelet ISO RGD PMID:20651232 RGD:7242710 NCBI chr19:55,013,705...55,038,264
Ensembl chr19:55,013,705...55,038,264
JBrowse link
G HLA-DPB1 major histocompatibility complex, class II, DP beta 1 IAGP RGD PMID:21569485 RGD:5147561 NCBI chr 6:33,075,990...33,089,696
Ensembl chr 6:33,075,936...33,089,696
JBrowse link
G HLA-DRB1 major histocompatibility complex, class II, DR beta 1 susceptibility IAGP DNA:polymorphism (human) RGD PMID:21569485 RGD:5147561 NCBI chr 6:32,578,775...32,589,848
Ensembl chr 6:32,577,902...32,589,848
JBrowse link
G IL10 interleukin 10 treatment ISO RGD PMID:23826305 RGD:7365004 NCBI chr 1:206,767,602...206,772,494
Ensembl chr 1:206,767,602...206,774,541
JBrowse link
G IL17A interleukin 17A treatment ISO RGD PMID:23826305 RGD:7365004 NCBI chr 6:52,186,375...52,190,638
Ensembl chr 6:52,186,375...52,190,638
JBrowse link
G IL18 interleukin 18 ISO RGD PMID:22046355 RGD:6893447 NCBI chr11:112,143,260...112,164,094
Ensembl chr11:112,143,251...112,164,096
JBrowse link
G IL1B interleukin 1 beta ISO mRNA:increased expression:kidney (mouse)
mRNA, protein:increased expression:kidney
RGD PMID:22046355 PMID:9198037 RGD:6893447, RGD:7401232 NCBI chr 2:112,829,751...112,836,779
Ensembl chr 2:112,829,751...112,836,816
JBrowse link
G IL1RN interleukin 1 receptor antagonist ISO RGD PMID:20071465 RGD:4145614 NCBI chr 2:113,099,360...113,134,014
Ensembl chr 2:113,099,315...113,134,016
JBrowse link
G IL4 interleukin 4 ISO RGD PMID:9350645 PMID:17898087 RGD:2317673, RGD:2307059 NCBI chr 5:132,673,989...132,682,678
Ensembl chr 5:132,673,986...132,682,678
JBrowse link
G ITGA4 integrin subunit alpha 4 treatment ISO RGD PMID:9032136 PMID:7679412 RGD:2308810, RGD:9698425 NCBI chr 2:181,457,205...181,538,940
Ensembl chr 2:181,457,202...181,538,940
JBrowse link
G MAPK14 mitogen-activated protein kinase 14 ISO RGD PMID:21894146 RGD:6218988 NCBI chr 6:36,027,808...36,124,214
Ensembl chr 6:36,027,752...36,122,511
JBrowse link
G MAPK8 mitogen-activated protein kinase 8 ISO RGD PMID:21894146 RGD:6218988 NCBI chr10:48,306,677...48,439,360
Ensembl chr10:48,306,639...48,439,360
JBrowse link
G MIF macrophage migration inhibitory factor ISO RGD PMID:10780884 RGD:1642011 NCBI chr22:23,894,383...23,895,223
Ensembl chr22:23,894,383...23,895,227
JBrowse link
G MMP12 matrix metallopeptidase 12 ISO RGD PMID:21894146 RGD:6218988 NCBI chr11:102,862,736...102,874,982
Ensembl chr11:102,862,736...102,874,982
JBrowse link
G MMP14 matrix metallopeptidase 14 ISO mRNA:increased expression:kidney, macrophage RGD PMID:10878552 RGD:2314954 NCBI chr14:22,836,585...22,847,758
Ensembl chr14:22,836,560...22,849,041
JBrowse link
G NOS2 nitric oxide synthase 2 ISO RGD PMID:21894146 RGD:6218988 NCBI chr17:27,756,766...27,800,529
Ensembl chr17:27,756,766...27,800,529
JBrowse link
G NPPB natriuretic peptide B ISO RGD PMID:11729234 RGD:7248605 NCBI chr 1:11,857,464...11,858,945
Ensembl chr 1:11,857,464...11,858,945
JBrowse link
G PDCD1 programmed cell death 1 treatment ISO RGD PMID:21965585 RGD:7248671 NCBI chr 2:241,849,884...241,858,894
Ensembl chr 2:241,849,884...241,858,894
JBrowse link
G PF4 platelet factor 4 treatment ISO RGD PMID:7573480 RGD:329901920 NCBI chr 4:73,980,811...73,982,124
Ensembl chr 4:73,980,811...73,982,027
JBrowse link
G PPARA peroxisome proliferator activated receptor alpha ISO RGD PMID:17888025 RGD:5563035 NCBI chr22:46,150,526...46,243,756
Ensembl chr22:46,150,521...46,243,755
JBrowse link
G PTK2B protein tyrosine kinase 2 beta ISO protein:increased expression:glomerulus RGD PMID:11774117 RGD:729912 NCBI chr 8:27,310,506...27,459,391
Ensembl chr 8:27,311,482...27,459,391
JBrowse link
G RAPGEF1 Rap guanine nucleotide exchange factor 1 ISO protein:increased expression:renal glomerulus RGD PMID:18784646 RGD:11534983 NCBI chr 9:131,576,775...131,740,076
Ensembl chr 9:131,576,770...131,740,076
JBrowse link
G SELP selectin P ISO RGD PMID:21894146 RGD:6218988 NCBI chr 1:169,588,849...169,630,124
Ensembl chr 1:169,588,849...169,630,193
JBrowse link
G SLC34A1 solute carrier family 34 member 1 ISO protein:decreased expression:kidney, brush border membrane (mouse) RGD PMID:19193726 RGD:7242947 NCBI chr 5:177,384,434...177,398,848
Ensembl chr 5:177,379,235...177,398,848
JBrowse link
G SLIT2 slit guidance ligand 2 ISO mRNA:decreased expression:kidney, glomerulus RGD PMID:15215188 RGD:2316132 NCBI chr 4:20,251,905...20,620,561
Ensembl chr 4:20,251,905...20,620,561
JBrowse link
G SPP1 secreted phosphoprotein 1 ISO RGD PMID:20504883 RGD:6903276 NCBI chr 4:87,975,714...87,983,411
Ensembl chr 4:87,975,667...87,983,532
JBrowse link
G SYK spleen associated tyrosine kinase ISO RGD PMID:21894146 RGD:6218988 NCBI chr 9:90,801,600...90,898,549
Ensembl chr 9:90,801,787...90,898,549
JBrowse link
G TNF tumor necrosis factor ISO RGD PMID:21894146 RGD:6218988 NCBI chr 6:31,575,565...31,578,336
Ensembl chr 6:31,575,565...31,578,336
JBrowse link
G VCAM1 vascular cell adhesion molecule 1 ISO protein:increased expression:urine, serum: RGD PMID:23460853 RGD:7241232 NCBI chr 1:100,719,742...100,739,045
Ensembl chr 1:100,719,742...100,739,045
JBrowse link
G XCL1 X-C motif chemokine ligand 1 ISO mRNA:increased expression:glomerulus RGD PMID:9717977 RGD:8693304 NCBI chr 1:168,576,605...168,582,069
Ensembl chr 1:168,576,605...168,582,069
JBrowse link
C1q Deficiency term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G C1QA complement C1q A chain IAGP ClinVar Annotator: match by term: C1Q deficiency ClinVar PMID:7594474 PMID:8840296 PMID:9225968 PMID:9590289 PMID:21654842 More... NCBI chr 1:22,636,463...22,639,678
Ensembl chr 1:22,635,077...22,639,678
JBrowse link
G C1QB complement C1q B chain IAGP ClinVar Annotator: match by term: C1Q deficiency ClinVar PMID:17513176 PMID:21654842 PMID:25741868 PMID:28492532 NCBI chr 1:22,653,236...22,661,637
Ensembl chr 1:22,652,762...22,661,637
JBrowse link
G C1QC complement C1q C chain IAGP ClinVar Annotator: match by term: C1Q deficiency ClinVar PMID:7029321 PMID:7900940 PMID:8630118 PMID:20635792 PMID:21654842 More... NCBI chr 1:22,643,633...22,648,108
Ensembl chr 1:22,643,014...22,648,110
JBrowse link
C1q Deficiency 1 term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G C1QA complement C1q A chain IAGP ClinVar Annotator: match by term: C1QA-related condition
ClinVar Annotator: match by term: C1Q deficiency 1
OMIM
ClinVar
PMID:25741868 PMID:28492532 NCBI chr 1:22,636,463...22,639,678
Ensembl chr 1:22,635,077...22,639,678
JBrowse link
C1q Deficiency 2 term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G C1QB complement C1q B chain IAGP ClinVar Annotator: match by term: C1Q deficiency 2
ClinVar Annotator: match by term: C1Q deficiency 2 | ClinVar Annotator: match by term: C1QB-related condition
OMIM
ClinVar
PMID:2894352 PMID:24160257 PMID:25741868 PMID:28492532 NCBI chr 1:22,653,236...22,661,637
Ensembl chr 1:22,652,762...22,661,637
JBrowse link
C1q Deficiency 3 term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G C1QC complement C1q C chain IAGP ClinVar Annotator: match by term: C1QC-related condition
ClinVar Annotator: match by term: C1Q deficiency 3
OMIM
ClinVar
PMID:7029321 PMID:8630118 PMID:24157463 PMID:28492532 NCBI chr 1:22,643,633...22,648,108
Ensembl chr 1:22,643,014...22,648,110
JBrowse link
C3 Glomerulopathy 3 term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CFH complement factor H IAGP ClinVar Annotator: match by term: CFH-Related Dense Deposit Disease / Membranoproliferative Glomerulonephritis Type II ClinVar PMID:8072530 PMID:9536098 PMID:11158219 PMID:11170895 PMID:11978762 More... NCBI chr 1:196,652,043...196,747,504
Ensembl chr 1:196,651,754...196,752,476
JBrowse link
G CFHR5 complement factor H related 5 IAGP ClinVar Annotator: match by term: CFH-Related Dense Deposit Disease / Membranoproliferative Glomerulonephritis Type II | ClinVar Annotator: match by term: CFHR5 deficiency
ClinVar Annotator: match by term: C3 glomerulonephritis | ClinVar Annotator: match by term: CFH-Related Dense Deposit Disease / Membranoproliferative Glomerulonephritis Type II | ClinVar Annotator: match by term: CFHR5 deficiency
OMIM
ClinVar
PMID:9536098 PMID:16299065 PMID:17000000 PMID:17576681 PMID:19365580 More... NCBI chr 1:196,975,034...197,009,678
Ensembl chr 1:196,975,010...197,009,678
JBrowse link
Chronic Mesangial Proliferative Glomerulonephritis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CX3CL1 C-X3-C motif chemokine ligand 1 ISO RGD PMID:12028445 RGD:9491783 NCBI chr16:57,372,490...57,385,044
Ensembl chr16:57,372,477...57,385,044
JBrowse link
G CX3CR1 C-X3-C motif chemokine receptor 1 ISO RGD PMID:12028445 RGD:9491783 NCBI chr 3:39,263,494...39,292,966
Ensembl chr 3:39,263,495...39,281,735
JBrowse link
crescentic glomerulonephritis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CCL2 C-C motif chemokine ligand 2 treatment ISO RGD PMID:8903512 PMID:17314328 RGD:8549743, RGD:8549770 NCBI chr17:34,255,285...34,257,203
Ensembl chr17:34,255,274...34,257,208
JBrowse link
G CCL3 C-C motif chemokine ligand 3 IEP
ISO
associated with Anti-Neutrophil Cytoplasmic Antibody-Associated Vasculitis RGD PMID:18846416 PMID:17898087 RGD:7241813, RGD:2307059 NCBI chr17:36,088,256...36,090,143
Ensembl chr17:36,088,256...36,090,169
JBrowse link
G CD40 CD40 molecule ISO RGD PMID:14569091 RGD:7248599 NCBI chr20:46,118,314...46,129,858
Ensembl chr20:46,118,271...46,129,863
JBrowse link
G CD40LG CD40 ligand treatment ISO RGD PMID:14569091 RGD:7248599 NCBI chr  X:136,648,158...136,660,390
Ensembl chr  X:136,648,158...136,660,390
JBrowse link
G CSF1R colony stimulating factor 1 receptor treatment ISO RGD PMID:23408165 RGD:151665815 NCBI chr 5:150,053,295...150,113,365
Ensembl chr 5:150,053,291...150,113,372
JBrowse link
G FCGR2A Fc gamma receptor IIa ISO DNA:CNV:3'UTR: RGD PMID:16482158 RGD:2293335 NCBI chr 1:161,505,457...161,524,048
Ensembl chr 1:161,505,430...161,524,013
JBrowse link
G IL1B interleukin 1 beta ISO RGD PMID:19959716 RGD:7175502 NCBI chr 2:112,829,751...112,836,779
Ensembl chr 2:112,829,751...112,836,816
JBrowse link
G IL1RN interleukin 1 receptor antagonist treatment IDA human protein in a rat model RGD PMID:7637259 RGD:8551712 NCBI chr 2:113,099,360...113,134,014
Ensembl chr 2:113,099,315...113,134,016
JBrowse link
G JUND JunD proto-oncogene, AP-1 transcription factor subunit ISO RGD PMID:18443593 RGD:2293336 NCBI chr19:18,279,694...18,281,622
Ensembl chr19:18,279,694...18,281,622
JBrowse link
G MMP12 matrix metallopeptidase 12 ISO RGD PMID:20488952 PMID:12626598 RGD:2325762, RGD:737630 NCBI chr11:102,862,736...102,874,982
Ensembl chr11:102,862,736...102,874,982
JBrowse link
G MMP3 matrix metallopeptidase 3 ISO RGD PMID:11095647 RGD:7241255 NCBI chr11:102,835,801...102,843,609
Ensembl chr11:102,835,801...102,843,609
JBrowse link
G MMP9 matrix metallopeptidase 9 ISO protein:increased expression:renal cortex (rat) RGD PMID:16046515 RGD:2313720 NCBI chr20:46,008,908...46,016,561
Ensembl chr20:46,008,908...46,016,561
JBrowse link
G MTOR mechanistic target of rapamycin kinase ISO RGD PMID:21403644 RGD:7245940 NCBI chr 1:11,106,535...11,262,551
Ensembl chr 1:11,106,535...11,262,556
JBrowse link
G STAT6 signal transducer and activator of transcription 6 ISO RGD PMID:21985369 RGD:7243976 NCBI chr12:57,095,408...57,111,362
Ensembl chr12:57,095,408...57,132,139
JBrowse link
G TLR9 toll like receptor 9 severity ISO RGD PMID:20847283 RGD:7246899 NCBI chr 3:52,221,080...52,225,645
Ensembl chr 3:52,221,080...52,225,645
JBrowse link
focal segmental glomerulosclerosis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACE2 angiotensin converting enzyme 2 EXP CTD Direct Evidence: marker/mechanism CTD PMID:16723697 NCBI chr  X:15,518,197...15,607,211
Ensembl chr  X:15,494,566...15,607,236
JBrowse link
G ACTA2 actin alpha 2, smooth muscle EXP CTD Direct Evidence: marker/mechanism CTD PMID:20493835 NCBI chr10:88,935,074...88,991,337
Ensembl chr10:88,934,822...88,991,339
JBrowse link
G ACTN4 actinin alpha 4 susceptibility IAGP
EXP
ClinVar Annotator: match by term: Focal segmental glomerulosclerosis
ClinVar Annotator: match by term: Glomerulosclerosis, focal
CTD Direct Evidence: marker/mechanism
ClinVar
CTD
RGD
PMID:16251236 PMID:18594871 PMID:19142020 PMID:19956976 PMID:21680739 More... RGD:1598731 NCBI chr19:38,647,649...38,731,589
Ensembl chr19:38,647,649...38,731,589
JBrowse link
G ACTR3 actin related protein 3 ISO DNA:missense mutation:cds:p.L111F (rat)
protein:increased expression:renal glomerulus (rat)
RGD PMID:18064521 PMID:27251563 RGD:2292230, RGD:11575049 NCBI chr 2:113,889,934...113,962,596
Ensembl chr 2:113,890,063...113,962,596
JBrowse link
G AGT angiotensinogen ISO
EXP
CTD Direct Evidence: marker/mechanism CTD
RGD
PMID:19858406 PMID:21357516 RGD:5129175 NCBI chr 1:230,702,523...230,745,583
Ensembl chr 1:230,690,776...230,745,576
JBrowse link
G AGTR1 angiotensin II receptor type 1 ISO protein:increased expression:kidney cortex RGD PMID:21357516 RGD:5129175 NCBI chr 3:148,697,903...148,743,003
Ensembl chr 3:148,697,784...148,743,008
JBrowse link
G AGTR2 angiotensin II receptor type 2 ISO protein:increased expression:kidney cortex RGD PMID:21357516 RGD:5129175 NCBI chr  X:116,170,744...116,174,974
Ensembl chr  X:116,170,744...116,174,974
JBrowse link
G ANGPT2 angiopoietin 2 ISO mRNA, protein:increased expression:glomerulus (rat) RGD PMID:16628643 RGD:2314213 NCBI chr 8:6,499,632...6,563,245
Ensembl chr 8:6,499,632...6,563,409
JBrowse link
G ANLN anillin, actin binding protein EXP CTD Direct Evidence: marker/mechanism CTD NCBI chr 7:36,389,862...36,453,791
Ensembl chr 7:36,389,821...36,453,791
JBrowse link
G APOL1 apolipoprotein L1 EXP
IAGP
CTD Direct Evidence: marker/mechanism
ClinVar Annotator: match by term: Hyalinosis, Segmental Glomerular
CTD
ClinVar
PMID:20635188 PMID:20647424 PMID:20668430 PMID:21997394 PMID:24033266 More... NCBI chr22:36,253,133...36,267,525
Ensembl chr22:36,253,071...36,267,530
JBrowse link
G ARHGAP24 Rho GTPase activating protein 24 IAGP ClinVar Annotator: match by term: Focal segmental glomerulosclerosis ClinVar NCBI chr 4:85,475,150...86,002,666
Ensembl chr 4:85,475,150...86,002,668
JBrowse link
G AXDND1 axonemal dynein light chain domain containing 1 IAGP ClinVar Annotator: match by term: Glomerulosclerosis, focal
ClinVar Annotator: match by term: Focal segmental glomerulosclerosis
ClinVar PMID:8589695 PMID:10742096 PMID:11805166 PMID:15253708 PMID:15327385 More... NCBI chr 1:179,365,705...179,554,735
Ensembl chr 1:179,365,720...179,554,735
JBrowse link
G BDKRB1 bradykinin receptor B1 ISO RGD PMID:21412216 RGD:7175321 NCBI chr14:96,256,210...96,264,763
Ensembl chr14:96,256,210...96,268,967
JBrowse link
G C2 complement C2 IAGP ClinVar Annotator: match by term: Focal segmental glomerulosclerosis ClinVar PMID:2249879 PMID:6308626 PMID:8181962 PMID:16518403 PMID:16936732 More... NCBI chr 6:31,897,783...31,945,672
Ensembl chr 6:31,897,785...31,945,673
JBrowse link
G C3 complement C3 IAGP ClinVar Annotator: match by term: Focal segmental glomerulosclerosis ClinVar PMID:1976733 PMID:7870343 PMID:16687714 PMID:17634448 PMID:17767156 More... NCBI chr19:6,677,704...6,720,650
Ensembl chr19:6,677,704...6,730,562
JBrowse link
G CASP9 caspase 9 treatment ISO RGD PMID:28245472 RGD:13782344 NCBI chr 1:15,491,401...15,524,912
Ensembl chr 1:15,490,832...15,526,534
JBrowse link
G CAT catalase ISO RGD PMID:22443450 RGD:7205647 NCBI chr11:34,438,934...34,472,060
Ensembl chr11:34,438,934...34,472,060
JBrowse link
G CCL11 C-C motif chemokine ligand 11 treatment ISO RGD PMID:22427838 RGD:7247740 NCBI chr17:34,285,742...34,288,334
Ensembl chr17:34,285,742...34,288,334
JBrowse link
G CCL3 C-C motif chemokine ligand 3 IEP RGD PMID:17684420 RGD:7241818 NCBI chr17:36,088,256...36,090,143
Ensembl chr17:36,088,256...36,090,169
JBrowse link
G CCN2 cellular communication network factor 2 EXP CTD Direct Evidence: marker/mechanism CTD PMID:17121042 NCBI chr 6:131,948,176...131,951,372
Ensembl chr 6:131,948,176...131,951,372
JBrowse link
G CD2AP CD2 associated protein IAGP
EXP
FSGS3, OMIM:607832, DNA:splice-site mutaton
ClinVar Annotator: match by term: Focal segmental glomerulosclerosis
CTD Direct Evidence: marker/mechanism
ClinVar
CTD
RGD
PMID:25741868 PMID:28492532 PMID:12764198 RGD:1600628 NCBI chr 6:47,477,789...47,627,263
Ensembl chr 6:47,477,789...47,627,263
JBrowse link
G CFB complement factor B ISO
IAGP
ClinVar Annotator: match by term: Focal segmental glomerulosclerosis ClinVar
RGD
PMID:2249879 PMID:6308626 PMID:8181962 PMID:16518403 PMID:16936732 More... RGD:7242704 NCBI chr 6:31,946,095...31,952,084
Ensembl chr 6:31,945,650...31,952,086
JBrowse link
G CFH complement factor H IAGP ClinVar Annotator: match by term: Focal segmental glomerulosclerosis ClinVar PMID:8072530 PMID:15870199 PMID:16299065 PMID:17089378 PMID:17947292 More... NCBI chr 1:196,652,043...196,747,504
Ensembl chr 1:196,651,754...196,752,476
JBrowse link
G CFI complement factor I IAGP ClinVar Annotator: match by term: Focal segmental glomerulosclerosis ClinVar PMID:18825487 PMID:25741868 PMID:28492532 NCBI chr 4:109,730,982...109,801,999
Ensembl chr 4:109,731,008...109,802,150
JBrowse link
G CMAS cytidine monophosphate N-acetylneuraminic acid synthetase ISS MouseDO NCBI chr12:22,046,218...22,065,668
Ensembl chr12:22,046,218...22,065,674
JBrowse link
G COL4A1 collagen type IV alpha 1 chain EXP CTD Direct Evidence: marker/mechanism CTD PMID:16191423 PMID:18682491 NCBI chr13:110,148,963...110,307,157
Ensembl chr13:110,148,963...110,307,202
JBrowse link
G COL4A3 collagen type IV alpha 3 chain IAGP ClinVar Annotator: match by term: Focal segmental glomerulosclerosis ClinVar PMID:14871398 PMID:17216251 PMID:18385178 PMID:24033266 PMID:24854265 More... NCBI chr 2:227,164,624...227,314,792
Ensembl chr 2:227,164,624...227,314,792
JBrowse link
G COL4A4 collagen type IV alpha 4 chain IAGP ClinVar Annotator: match by term: Focal segmental glomerulosclerosis ClinVar PMID:12028435 PMID:15618242 PMID:17396119 PMID:19129241 PMID:20029656 More... NCBI chr 2:226,967,360...227,164,488
Ensembl chr 2:227,002,714...227,164,453
JBrowse link
G COL4A5 collagen type IV alpha 5 chain IAGP ClinVar Annotator: match by term: Focal segmental glomerulosclerosis ClinVar PMID:8648925 PMID:9195222 PMID:10561141 PMID:10752524 PMID:14514738 More... NCBI chr  X:108,439,838...108,697,545
Ensembl chr  X:108,439,838...108,697,545
JBrowse link
G COQ2 coenzyme Q2, polyprenyltransferase IAGP ClinVar Annotator: match by term: Focal segmental glomerulosclerosis ClinVar PMID:24033266 PMID:25741868 PMID:28492532 NCBI chr 4:83,263,824...83,285,134
Ensembl chr 4:83,261,536...83,284,914
JBrowse link
G COQ8B coenzyme Q8B IAGP ClinVar Annotator: match by term: Focal segmental glomerulosclerosis ClinVar PMID:25741868 PMID:32543055 NCBI chr19:40,691,530...40,716,886
Ensembl chr19:40,691,514...40,725,784
JBrowse link
G CRB2 crumbs cell polarity complex component 2 EXP CTD Direct Evidence: marker/mechanism CTD NCBI chr 9:123,354,065...123,380,326
Ensembl chr 9:123,356,170...123,380,324
JBrowse link
G CUBN cubilin IAGP ClinVar Annotator: match by term: Glomerulosclerosis, focal ClinVar PMID:25741868 PMID:28492532 NCBI chr10:16,823,966...17,129,811
Ensembl chr10:16,823,966...17,129,811
JBrowse link
G EDN1 endothelin 1 EXP CTD Direct Evidence: marker/mechanism CTD PMID:16191423 NCBI chr 6:12,230,516...12,297,194
Ensembl chr 6:12,290,361...12,297,194
JBrowse link
G EYA1 EYA transcriptional coactivator and phosphatase 1 IAGP ClinVar Annotator: match by term: Glomerulosclerosis, focal ClinVar PMID:10991693 PMID:24033266 PMID:25741868 PMID:31049720 NCBI chr 8:71,197,433...71,548,094
Ensembl chr 8:71,197,433...71,592,025
JBrowse link
G FN1 fibronectin 1 EXP CTD Direct Evidence: marker/mechanism CTD PMID:16191423 NCBI chr 2:215,360,865...215,436,068
Ensembl chr 2:215,360,440...215,436,073
JBrowse link
G GNAQ G protein subunit alpha q EXP CTD Direct Evidence: marker/mechanism CTD PMID:16267159 NCBI chr 9:77,716,097...78,031,811
Ensembl chr 9:77,716,097...78,031,811
JBrowse link
G HAVCR1 hepatitis A virus cellular receptor 1 EXP CTD Direct Evidence: marker/mechanism CTD PMID:19225054 NCBI chr 5:157,029,413...157,069,407
Ensembl chr 5:157,026,742...157,069,396
JBrowse link
G HR HR lysine demethylase and nuclear receptor corepressor ISO RGD PMID:21325752 RGD:150520024 NCBI chr 8:22,114,419...22,131,052
Ensembl chr 8:22,114,419...22,133,384
JBrowse link
G HSPB1 heat shock protein family B (small) member 1 IEP protein:increased expression:glomerulus, podocyte: RGD PMID:21931298 RGD:10402764 NCBI chr 7:76,302,673...76,304,292
Ensembl chr 7:76,302,673...76,305,813
JBrowse link
G IL1B interleukin 1 beta ISO RGD PMID:21412216 RGD:7175321 NCBI chr 2:112,829,751...112,836,779
Ensembl chr 2:112,829,751...112,836,816
JBrowse link
G INF2 inverted formin 2 EXP
IAGP
CTD Direct Evidence: marker/mechanism
ClinVar Annotator: match by term: Focal segmental glomerulosclerosis
ClinVar Annotator: match by term: Focal segmental glomerulosclerosis | ClinVar Annotator: match by term: Glomerulosclerosis, focal
CTD
ClinVar
PMID:20023659 PMID:21866090 PMID:25741868 PMID:26467025 PMID:28492532 More... NCBI chr14:104,681,133...104,722,535
Ensembl chr14:104,681,146...104,722,535
JBrowse link
G ITGB3 integrin subunit beta 3 ISO RGD PMID:21804539 RGD:6907385 NCBI chr17:47,253,827...47,313,743
Ensembl chr17:47,253,827...47,313,743
JBrowse link
G ITGB4 integrin subunit beta 4 IAGP ClinVar Annotator: match by term: Focal segmental glomerulosclerosis ClinVar PMID:25741868 NCBI chr17:75,721,459...75,757,818
Ensembl chr17:75,721,328...75,757,818
JBrowse link
G KIRREL2 kirre like nephrin family adhesion molecule 2 IAGP ClinVar Annotator: match by term: Focal segmental glomerulosclerosis
ClinVar Annotator: match by term: Focal segmental glomerulosclerosis | ClinVar Annotator: match by term: Glomerulosclerosis, focal
ClinVar PMID:19406966 PMID:25741868 PMID:26467025 PMID:28492532 NCBI chr19:35,851,399...35,867,136
Ensembl chr19:35,855,861...35,867,136
JBrowse link
G LAMB2 laminin subunit beta 2 IAGP ClinVar Annotator: match by term: Glomerulosclerosis, focal
ClinVar Annotator: match by term: Focal segmental glomerulosclerosis
ClinVar Annotator: match by term: Focal segmental glomerulosclerosis | ClinVar Annotator: match by term: Glomerulosclerosis, focal
ClinVar PMID:20556798 PMID:25741868 PMID:26467025 PMID:28492532 NCBI chr 3:49,121,114...49,133,050
Ensembl chr 3:49,121,114...49,133,118
JBrowse link
G LIPC lipase C, hepatic type ISO protein:reduced expression:serum (rat) RGD PMID:14531811 RGD:2308781 NCBI chr15:58,431,991...58,569,844
Ensembl chr15:58,410,569...58,569,844
JBrowse link
G LMX1B LIM homeobox transcription factor 1 beta IAGP ClinVar Annotator: match by term: Focal segmental glomerulosclerosis ClinVar PMID:25741868 PMID:28492532 NCBI chr 9:126,613,928...126,701,032
Ensembl chr 9:126,613,928...126,701,032
JBrowse link
G LOC107982234 WT1/WT1-AS bi-directional promoter region IAGP ClinVar Annotator: match by term: Focal segmental glomerulosclerosis ClinVar PMID:18559874 PMID:18591546 PMID:19171881 PMID:19221039 PMID:19494353 More... NCBI chr11:32,430,169...32,437,423 JBrowse link
G LOC112997540 Sharpr-MPRA regulatory region 13773 IAGP ClinVar Annotator: match by term: Focal segmental glomerulosclerosis ClinVar PMID:24033266 PMID:25741868 PMID:28492532 NCBI chr 4:83,284,501...83,284,930 JBrowse link
G LOC126806995 BRD4-independent group 4 enhancer GRCh37_chr4:17615609-17616808 IAGP ClinVar Annotator: match by term: Focal segmental glomerulosclerosis ClinVar PMID:25741868 NCBI chr 4:17,613,986...17,615,185 JBrowse link
G LPL lipoprotein lipase ISO RGD PMID:14531811 RGD:2308781 NCBI chr 8:19,939,253...19,967,259
Ensembl chr 8:19,901,717...19,967,259
JBrowse link
G MED28 mediator complex subunit 28 IAGP ClinVar Annotator: match by term: Focal segmental glomerulosclerosis ClinVar PMID:25741868 NCBI chr 4:17,614,641...17,634,105
Ensembl chr 4:17,614,641...17,634,105
JBrowse link
G MFF-DT MFF divergent transcript IAGP ClinVar Annotator: match by term: Focal segmental glomerulosclerosis ClinVar PMID:14871398 PMID:17216251 PMID:18385178 PMID:24033266 PMID:24854265 More... NCBI chr 2:227,221,052...227,325,164
Ensembl chr 2:227,221,052...227,325,711
JBrowse link
G MIR193A microRNA 193a ISS MouseDO NCBI chr17:31,559,996...31,560,083
Ensembl chr17:31,559,996...31,560,083
JBrowse link
G MMP2 matrix metallopeptidase 2 ISO mRNA, protein:increased expression, increased activity:kidney RGD PMID:19357873 RGD:2325738 NCBI chr16:55,478,830...55,506,691
Ensembl chr16:55,389,700...55,506,691
JBrowse link
G MMP9 matrix metallopeptidase 9 ISO mRNA, protein:increased expression, increased activity:kidney RGD PMID:19357873 RGD:2325738 NCBI chr20:46,008,908...46,016,561
Ensembl chr20:46,008,908...46,016,561
JBrowse link
G MPV17 mitochondrial inner membrane protein MPV17 EXP CTD Direct Evidence: marker/mechanism CTD PMID:18818194 NCBI chr 2:27,309,492...27,323,097
Ensembl chr 2:27,309,492...27,325,680
JBrowse link
G MT-TY mitochondrially encoded tRNA-Tyr (UAU/C) IAGP ClinVar Annotator: match by term: Focal segmental glomerulosclerosis and dilated cardiomyopathy ClinVar PMID:14598342 PMID:31965079 NCBI chr MT:5,826...5,891
Ensembl chr MT:5,826...5,891
JBrowse link
G MYH10 myosin heavy chain 10 EXP CTD Direct Evidence: marker/mechanism CTD PMID:9678433 NCBI chr17:8,474,212...8,630,725
Ensembl chr17:8,474,207...8,631,376
JBrowse link
G MYH9 myosin heavy chain 9 ISO
IAGP
EXP
ClinVar Annotator: match by term: Focal segmental glomerulosclerosis
CTD Direct Evidence: marker/mechanism
ClinVar
CTD
RGD
PMID:18794856 PMID:19557653 PMID:23144074 PMID:24033266 PMID:25741868 More... RGD:6903254 NCBI chr22:36,281,280...36,387,967
Ensembl chr22:36,281,280...36,388,010
JBrowse link
G MYO1E myosin IE EXP CTD Direct Evidence: marker/mechanism CTD NCBI chr15:59,132,434...59,372,871
Ensembl chr15:59,132,434...59,372,871
JBrowse link
G MYO9A myosin IXA ISS
IAGP
ClinVar Annotator: match by term: Focal segmental glomerulosclerosis
ClinVar Annotator: match by term: Focal segmental glomerulosclerosis | ClinVar Annotator: match by term: Glomerulosclerosis, focal
MouseDO
ClinVar
PMID:25741868 PMID:33412162 NCBI chr15:71,822,291...72,118,600
Ensembl chr15:71,822,291...72,118,577
JBrowse link
G NLRP3 NLR family pyrin domain containing 3 IAGP ClinVar Annotator: match by term: Focal segmental glomerulosclerosis ClinVar PMID:17509468 PMID:18263599 PMID:18311798 PMID:19319132 PMID:20182451 More... NCBI chr 1:247,416,077...247,448,817
Ensembl chr 1:247,332,331...247,449,108
JBrowse link
G NOC3L NOC3 like DNA replication regulator IAGP ClinVar Annotator: match by term: Focal segmental glomerulosclerosis ClinVar PMID:25741868 NCBI chr10:94,314,907...94,362,939
Ensembl chr10:94,333,226...94,362,959
JBrowse link
G NOS2 nitric oxide synthase 2 EXP CTD Direct Evidence: marker/mechanism CTD PMID:16191423 NCBI chr17:27,756,766...27,800,529
Ensembl chr17:27,756,766...27,800,529
JBrowse link
G NPHP1 nephrocystin 1 IAGP ClinVar Annotator: match by term: Focal segmental glomerulosclerosis ClinVar PMID:25741868 PMID:28492532 NCBI chr 2:110,123,348...110,205,013
Ensembl chr 2:110,122,311...110,205,066
JBrowse link
G NPHP3 nephrocystin 3 IAGP ClinVar Annotator: match by term: Glomerulosclerosis, focal ClinVar PMID:25741868 PMID:28492532 NCBI chr 3:132,680,609...132,722,409
Ensembl chr 3:132,680,609...132,722,432
JBrowse link
G NPHP3-ACAD11 NPHP3-ACAD11 readthrough (NMD candidate) IAGP ClinVar Annotator: match by term: Glomerulosclerosis, focal ClinVar PMID:25741868 PMID:28492532 NCBI chr 3:132,558,138...132,722,459
Ensembl chr 3:132,558,142...132,722,459
JBrowse link
G NPHP4 nephrocystin 4 IAGP ClinVar Annotator: match by term: Focal segmental glomerulosclerosis ClinVar PMID:25741868 PMID:28492532 NCBI chr 1:5,862,811...5,992,425
Ensembl chr 1:5,862,811...5,992,473
JBrowse link
G NPHS1 NPHS1 adhesion molecule, nephrin disease_progression IEP mRNA:increased expression:urine (human)
protein:decreased expression:kidney,renal glomerulus (human)
RGD PMID:21414970 PMID:30900988 RGD:38549367, RGD:15023481 NCBI chr19:35,862,915...35,869,357
Ensembl chr19:35,825,964...35,869,287
JBrowse link
G NPHS1 NPHS1 adhesion molecule, nephrin EXP
IAGP
CTD Direct Evidence: marker/mechanism
ClinVar Annotator: match by term: Focal segmental glomerulosclerosis
ClinVar Annotator: match by term: Glomerulosclerosis, focal
ClinVar Annotator: match by term: Focal segmental glomerulosclerosis | ClinVar Annotator: match by term: Glomerulosclerosis, focal
CTD
ClinVar
PMID:9915943 PMID:10652016 PMID:11317351 PMID:11726550 PMID:11854170 More... NCBI chr19:35,825,372...35,852,504
Ensembl chr19:35,825,372...35,869,287
JBrowse link
G NPHS2 NPHS2 stomatin family member, podocin EXP
IAGP
CTD Direct Evidence: marker/mechanism
ClinVar Annotator: match by term: Glomerulosclerosis, focal
ClinVar Annotator: match by term: Focal segmental glomerulosclerosis | ClinVar Annotator: match by term: Glomerulosclerosis, focal
CTD
ClinVar
PMID:1523708 PMID:8589695 PMID:10742096 PMID:11805166 PMID:11805168 More... NCBI chr 1:179,550,539...179,575,948
Ensembl chr 1:179,550,539...179,575,952
JBrowse link
G NUP93 nucleoporin 93 IAGP ClinVar Annotator: match by term: Focal segmental glomerulosclerosis ClinVar PMID:32581362 NCBI chr16:56,730,129...56,850,286
Ensembl chr16:56,730,118...56,850,286
JBrowse link
G NXF5 nuclear RNA export factor 5 IAGP ClinVar Annotator: match by term: Focal segmental glomerulosclerosis ClinVar PMID:23686279 NCBI chr  X:101,832,112...101,857,577
Ensembl chr  X:101,832,537...101,843,278
Ensembl chr  X:101,832,537...101,843,278
JBrowse link
G PAX2 paired box 2 EXP
IAGP
CTD Direct Evidence: marker/mechanism
ClinVar Annotator: match by term: Glomerulosclerosis, focal
ClinVar Annotator: match by term: Focal segmental glomerulosclerosis
CTD
ClinVar
PMID:3377002 PMID:8589702 PMID:9106533 PMID:11093271 PMID:11241473 More... NCBI chr10:100,735,396...100,829,944
Ensembl chr10:100,735,396...100,829,944
JBrowse link
G PCNA proliferating cell nuclear antigen EXP CTD Direct Evidence: marker/mechanism CTD PMID:17121042 NCBI chr20:5,114,953...5,126,622
Ensembl chr20:5,114,953...5,126,626
JBrowse link
G PDSS2 decaprenyl diphosphate synthase subunit 2 IAGP ClinVar Annotator: match by term: Focal segmental glomerulosclerosis ClinVar PMID:25741868 PMID:28492532 NCBI chr 6:107,152,562...107,459,564
Ensembl chr 6:107,152,562...107,459,564
JBrowse link
G PIAS1 protein inhibitor of activated STAT 1 ISO RGD PMID:19350281 RGD:8693412 NCBI chr15:68,054,315...68,193,847
Ensembl chr15:68,054,309...68,198,603
JBrowse link
G PLCE1 phospholipase C epsilon 1 IAGP ClinVar Annotator: match by term: Focal segmental glomerulosclerosis
ClinVar Annotator: match by term: Focal segmental glomerulosclerosis | ClinVar Annotator: match by term: Glomerulosclerosis, focal
ClinVar PMID:18975016 PMID:20507940 PMID:25060053 PMID:25741868 PMID:26467025 More... NCBI chr10:93,993,931...94,332,823
Ensembl chr10:93,993,931...94,332,823
JBrowse link
G PLCE1-AS1 PLCE1 antisense RNA 1 IAGP ClinVar Annotator: match by term: Focal segmental glomerulosclerosis ClinVar PMID:25741868 PMID:28492532 NCBI chr10:94,279,290...94,287,070
Ensembl chr10:94,278,280...94,287,478
JBrowse link
G PMM2 phosphomannomutase 2 IAGP ClinVar Annotator: match by term: Glomerulosclerosis, focal ClinVar PMID:9140401 PMID:9497260 PMID:9781039 PMID:10386614 PMID:10527672 More... NCBI chr16:8,797,839...8,849,325
Ensembl chr16:8,788,823...8,862,534
JBrowse link
G PPP3CA protein phosphatase 3 catalytic subunit alpha IEP RGD PMID:26436650 RGD:13515117 NCBI chr 4:101,023,418...101,347,526
Ensembl chr 4:101,023,409...101,348,278
JBrowse link
G PPP3CB protein phosphatase 3 catalytic subunit beta IEP RGD PMID:26436650 RGD:13515117 NCBI chr10:73,436,433...73,496,024
Ensembl chr10:73,436,433...73,496,024
JBrowse link
G RAP1GAP RAP1 GTPase activating protein IEP mRNA:increased expression:renal glomerulus (human) RGD PMID:24642466 RGD:9835343 NCBI chr 1:21,596,221...21,669,357
Ensembl chr 1:21,596,221...21,669,357
JBrowse link
G REG1A regenerating family member 1 alpha IAGP ClinVar Annotator: match by term: Focal segmental glomerulosclerosis ClinVar PMID:25741868 NCBI chr 2:79,120,488...79,123,409
Ensembl chr 2:79,120,362...79,123,409
JBrowse link
G RPGRIP1L RPGRIP1 like IAGP ClinVar Annotator: match by term: Glomerulosclerosis, focal ClinVar PMID:19430481 PMID:20301500 PMID:25741868 PMID:28492532 NCBI chr16:53,598,153...53,703,859
Ensembl chr16:53,598,153...53,703,938
JBrowse link
G SCARB2 scavenger receptor class B member 2 IAGP ClinVar Annotator: match by term: Focal segmental glomerulosclerosis
ClinVar Annotator: match by term: Focal segmental glomerulosclerosis | ClinVar Annotator: match by term: Glomerulosclerosis, focal
ClinVar PMID:25088547 PMID:25741868 PMID:26467025 PMID:28492532 NCBI chr 4:76,158,737...76,234,532
Ensembl chr 4:76,158,737...76,234,536
JBrowse link
G SDCCAG8 SHH signaling and ciliogenesis regulator SDCCAG8 IAGP ClinVar Annotator: match by term: Focal segmental glomerulosclerosis | ClinVar Annotator: match by term: Glomerulosclerosis, focal ClinVar PMID:25741868 NCBI chr 1:243,256,041...243,500,091
Ensembl chr 1:243,256,034...243,500,091
JBrowse link
G SERPINE1 serpin family E member 1 treatment ISO
EXP
CTD Direct Evidence: marker/mechanism CTD
RGD
PMID:18682491 PMID:22303720 RGD:13208548 NCBI chr 7:101,127,104...101,139,247
Ensembl chr 7:101,127,104...101,139,247
JBrowse link
G SHH sonic hedgehog signaling molecule IEP RGD PMID:24744439 RGD:12859042 NCBI chr 7:155,799,980...155,812,463
Ensembl chr 7:155,799,980...155,812,463
JBrowse link
G SLC17A5 solute carrier family 17 member 5 IAGP ClinVar Annotator: match by term: Glomerulosclerosis, focal ClinVar PMID:25741868 PMID:28492532 PMID:29140481 NCBI chr 6:73,593,379...73,653,992
Ensembl chr 6:73,593,379...73,653,992
JBrowse link
G SMARCAL1 SNF2 related chromatin remodeling annealing helicase 1 IAGP ClinVar Annotator: match by term: Glomerulosclerosis, focal
ClinVar Annotator: match by term: Focal segmental glomerulosclerosis | ClinVar Annotator: match by term: Glomerulosclerosis, focal
ClinVar PMID:11799392 PMID:15880370 PMID:16840568 PMID:17089404 PMID:18805831 More... NCBI chr 2:216,412,484...216,483,053
Ensembl chr 2:216,412,383...216,483,053
JBrowse link
G SPP1 secreted phosphoprotein 1 EXP CTD Direct Evidence: marker/mechanism CTD PMID:9294829 NCBI chr 4:87,975,714...87,983,411
Ensembl chr 4:87,975,667...87,983,532
JBrowse link
G SREBF2 sterol regulatory element binding transcription factor 2 ISO RGD PMID:16316337 RGD:1581416 NCBI chr22:41,833,105...41,907,305
Ensembl chr22:41,833,105...41,907,306
JBrowse link
G SRGAP1 SLIT-ROBO Rho GTPase activating protein 1 ISS MouseDO NCBI chr12:63,844,700...64,162,217
Ensembl chr12:63,843,761...64,162,217
JBrowse link
G TGFB1 transforming growth factor beta 1 EXP CTD Direct Evidence: marker/mechanism CTD PMID:16191423 PMID:18682491 PMID:20493835 NCBI chr19:41,330,323...41,353,922
Ensembl chr19:41,301,587...41,353,922
JBrowse link
G TMEM63C transmembrane protein 63C IEP protein:decreased expression:kidney,renal glomerulus (human) RGD PMID:30900988 RGD:15023481 NCBI chr14:77,181,798...77,259,495
Ensembl chr14:77,116,568...77,259,495
JBrowse link
G TNF tumor necrosis factor ISO protein:increased expression:serum RGD PMID:21221075 RGD:7245511 NCBI chr 6:31,575,565...31,578,336
Ensembl chr 6:31,575,565...31,578,336
JBrowse link
G TNFAIP2 TNF alpha induced protein 2 ISS MouseDO NCBI chr14:103,121,469...103,137,439
Ensembl chr14:103,121,476...103,137,439
JBrowse link
G TNFRSF1A TNF receptor superfamily member 1A ISO protein:increased expression:serum RGD PMID:21221075 RGD:7245511 NCBI chr12:6,328,771...6,342,076
Ensembl chr12:6,328,757...6,342,114
JBrowse link
G TNFRSF1B TNF receptor superfamily member 1B ISO protein:increased expression:serum RGD PMID:21221075 RGD:7245511 NCBI chr 1:12,166,991...12,209,220
Ensembl chr 1:12,166,991...12,209,228
JBrowse link
G TRPC6 transient receptor potential cation channel subfamily C member 6 treatment ISO
IAGP
EXP
ClinVar Annotator: match by term: Focal segmental glomerulosclerosis | ClinVar Annotator: match by term: Glomerulosclerosis, focal
CTD Direct Evidence: marker/mechanism
DNA:missense mutation:exon:p.P112Q (human)
DNA:nonsense mutation, missense mutations: :multiple
DNA:SNP:exon:p.P15S (human)
ClinVar
CTD
RGD
PMID:19936226 PMID:22980509 PMID:25019165 PMID:25741868 PMID:26467025 More... RGD:7247440, RGD:7247581, RGD:7247580, RGD:7247445, RGD:7247444 NCBI chr11:101,451,564...101,584,007
Ensembl chr11:101,451,564...101,872,562
JBrowse link
G VLDLR very low density lipoprotein receptor ISO protein:decreased expression:adipose tissue, skeletal muscle (rat) RGD PMID:11786096 RGD:2324671 NCBI chr 9:2,621,787...2,660,056
Ensembl chr 9:2,621,182...2,660,056
JBrowse link
G VWF von Willebrand factor IEP RGD PMID:22295953 RGD:7207031 NCBI chr12:5,948,877...6,124,670
Ensembl chr12:5,948,877...6,124,770
JBrowse link
G WT1 WT1 transcription factor IAGP ClinVar Annotator: match by term: Focal segmental glomerulosclerosis ClinVar PMID:7795587 PMID:8388765 PMID:9108089 PMID:9531607 PMID:10571943 More... NCBI chr11:32,387,775...32,435,539
Ensembl chr11:32,387,775...32,435,564
JBrowse link
G ZMPSTE24 zinc metallopeptidase STE24 EXP CTD Direct Evidence: marker/mechanism CTD PMID:17152860 NCBI chr 1:40,258,236...40,294,180
Ensembl chr 1:40,258,041...40,294,180
JBrowse link
focal segmental glomerulosclerosis 1 term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACE angiotensin I converting enzyme treatment ISO RGD PMID:8505110 RGD:12880006 NCBI chr17:63,477,061...63,498,373
Ensembl chr17:63,477,061...63,498,380
JBrowse link
G ACTN4 actinin alpha 4 IAGP
ISS
ClinVar Annotator: match by term: ACTN4-related condition | ClinVar Annotator: match by term: Focal segmental glomerulosclerosis 1
ClinVar Annotator: match by term: Focal sclerosis with hyalinosis | ClinVar Annotator: match by term: Focal segmental glomerulosclerosis 1
OMIM:603278
OMIM
ClinVar
MouseDO
PMID:9536098 PMID:10700177 PMID:16251236 PMID:17576681 PMID:18594871 More... NCBI chr19:38,647,649...38,731,589
Ensembl chr19:38,647,649...38,731,589
JBrowse link
G APOL1 apolipoprotein L1 IAGP ClinVar Annotator: match by term: Focal sclerosis with hyalinosis ClinVar PMID:20635188 PMID:20647424 PMID:20668430 PMID:21997394 PMID:24033266 More... NCBI chr22:36,253,133...36,267,525
Ensembl chr22:36,253,071...36,267,530
JBrowse link
G ARHGAP24 Rho GTPase activating protein 24 IAGP ClinVar Annotator: match by term: Focal segmental glomerulosclerosis 1 ClinVar NCBI chr 4:85,475,150...86,002,666
Ensembl chr 4:85,475,150...86,002,668
JBrowse link
G AXDND1 axonemal dynein light chain domain containing 1 IAGP ClinVar Annotator: match by term: Focal sclerosis with hyalinosis ClinVar PMID:8589695 PMID:10742096 PMID:11805166 PMID:15253708 PMID:15327385 More... NCBI chr 1:179,365,705...179,554,735
Ensembl chr 1:179,365,720...179,554,735
JBrowse link
G C2 complement C2 IAGP ClinVar Annotator: match by term: Focal sclerosis with hyalinosis ClinVar PMID:2249879 PMID:6308626 PMID:8181962 PMID:16518403 PMID:16936732 More... NCBI chr 6:31,897,783...31,945,672
Ensembl chr 6:31,897,785...31,945,673
JBrowse link
G C3 complement C3 IAGP ClinVar Annotator: match by term: Focal sclerosis with hyalinosis ClinVar PMID:1976733 PMID:17634448 PMID:18325906 PMID:19168221 PMID:25741868 More... NCBI chr19:6,677,704...6,720,650
Ensembl chr19:6,677,704...6,730,562
JBrowse link
G CD2AP CD2 associated protein IAGP ClinVar Annotator: match by term: Focal sclerosis with hyalinosis ClinVar PMID:25741868 NCBI chr 6:47,477,789...47,627,263
Ensembl chr 6:47,477,789...47,627,263
JBrowse link
G CFB complement factor B IAGP ClinVar Annotator: match by term: Focal sclerosis with hyalinosis ClinVar PMID:2249879 PMID:6308626 PMID:8181962 PMID:16518403 PMID:16936732 More... NCBI chr 6:31,946,095...31,952,084
Ensembl chr 6:31,945,650...31,952,086
JBrowse link
G CFI complement factor I IAGP ClinVar Annotator: match by term: Focal sclerosis with hyalinosis ClinVar PMID:18825487 PMID:25741868 PMID:28492532 NCBI chr 4:109,730,982...109,801,999
Ensembl chr 4:109,731,008...109,802,150
JBrowse link
G COL4A4 collagen type IV alpha 4 chain IAGP ClinVar Annotator: match by term: Focal sclerosis with hyalinosis ClinVar PMID:19129241 PMID:21196518 PMID:24052634 PMID:24522496 PMID:24854265 More... NCBI chr 2:226,967,360...227,164,488
Ensembl chr 2:227,002,714...227,164,453
JBrowse link
G CUBN cubilin IAGP ClinVar Annotator: match by term: Focal sclerosis with hyalinosis ClinVar PMID:25741868 PMID:28492532 NCBI chr10:16,823,966...17,129,811
Ensembl chr10:16,823,966...17,129,811
JBrowse link
G EYA1 EYA transcriptional coactivator and phosphatase 1 IAGP ClinVar Annotator: match by term: Focal sclerosis with hyalinosis ClinVar PMID:10991693 PMID:24033266 PMID:25741868 PMID:31049720 NCBI chr 8:71,197,433...71,548,094
Ensembl chr 8:71,197,433...71,592,025
JBrowse link
G INF2 inverted formin 2 IAGP ClinVar Annotator: match by term: Focal sclerosis with hyalinosis ClinVar PMID:25741868 PMID:28492532 NCBI chr14:104,681,133...104,722,535
Ensembl chr14:104,681,146...104,722,535
JBrowse link
G KIRREL2 kirre like nephrin family adhesion molecule 2 IAGP ClinVar Annotator: match by term: Focal sclerosis with hyalinosis ClinVar PMID:25741868 PMID:28492532 NCBI chr19:35,851,399...35,867,136
Ensembl chr19:35,855,861...35,867,136
JBrowse link
G LAMB2 laminin subunit beta 2 IAGP ClinVar Annotator: match by term: Focal sclerosis with hyalinosis ClinVar PMID:20556798 PMID:25741868 PMID:26467025 PMID:28492532 NCBI chr 3:49,121,114...49,133,050
Ensembl chr 3:49,121,114...49,133,118
JBrowse link
G LOC130064361 ATAC-STARR-seq lymphoblastoid silent region 10579 IAGP ClinVar Annotator: match by term: Focal segmental glomerulosclerosis 1 ClinVar PMID:25741868 NCBI chr19:38,647,909...38,647,988 JBrowse link
G MYH9 myosin heavy chain 9 IAGP ClinVar Annotator: match by term: Focal sclerosis with hyalinosis ClinVar PMID:19557653 PMID:23144074 PMID:24033266 PMID:25741868 PMID:26346198 More... NCBI chr22:36,281,280...36,387,967
Ensembl chr22:36,281,280...36,388,010
JBrowse link
G MYO9A myosin IXA IAGP ClinVar Annotator: match by term: Focal sclerosis with hyalinosis ClinVar PMID:25741868 PMID:33412162 NCBI chr15:71,822,291...72,118,600
Ensembl chr15:71,822,291...72,118,577
JBrowse link
G NLRP3 NLR family pyrin domain containing 3 IAGP ClinVar Annotator: match by term: Focal sclerosis with hyalinosis ClinVar PMID:17509468 PMID:18263599 PMID:18311798 PMID:19319132 PMID:20182451 More... NCBI chr 1:247,416,077...247,448,817
Ensembl chr 1:247,332,331...247,449,108
JBrowse link
G NPHP3 nephrocystin 3 IAGP ClinVar Annotator: match by term: Focal sclerosis with hyalinosis ClinVar PMID:25741868 PMID:28492532 NCBI chr 3:132,680,609...132,722,409
Ensembl chr 3:132,680,609...132,722,432
JBrowse link
G NPHP3-ACAD11 NPHP3-ACAD11 readthrough (NMD candidate) IAGP ClinVar Annotator: match by term: Focal sclerosis with hyalinosis ClinVar PMID:25741868 PMID:28492532 NCBI chr 3:132,558,138...132,722,459
Ensembl chr 3:132,558,142...132,722,459
JBrowse link
G NPHS1 NPHS1 adhesion molecule, nephrin IAGP ClinVar Annotator: match by term: Focal sclerosis with hyalinosis ClinVar PMID:9915943 PMID:11726550 PMID:11854170 PMID:18503012 PMID:18614772 More... NCBI chr19:35,825,372...35,852,504
Ensembl chr19:35,825,372...35,869,287
JBrowse link
G NPHS2 NPHS2 stomatin family member, podocin IAGP ClinVar Annotator: match by term: Focal sclerosis with hyalinosis ClinVar PMID:8589695 PMID:10742096 PMID:11805166 PMID:11854170 PMID:12446471 More... NCBI chr 1:179,550,539...179,575,948
Ensembl chr 1:179,550,539...179,575,952
JBrowse link
G NUP107 nucleoporin 107 IAGP ClinVar Annotator: match by term: Focal segmental glomerulosclerosis 1 ClinVar NCBI chr12:68,686,978...68,745,809
Ensembl chr12:68,686,951...68,745,809
JBrowse link
G PAX2 paired box 2 IAGP ClinVar Annotator: match by term: Focal sclerosis with hyalinosis ClinVar PMID:3377002 PMID:8589702 PMID:9106533 PMID:11093271 PMID:11241473 More... NCBI chr10:100,735,396...100,829,944
Ensembl chr10:100,735,396...100,829,944
JBrowse link
G PLCE1 phospholipase C epsilon 1 IAGP ClinVar Annotator: match by term: Focal sclerosis with hyalinosis ClinVar PMID:25741868 PMID:26467025 PMID:28492532 NCBI chr10:93,993,931...94,332,823
Ensembl chr10:93,993,931...94,332,823
JBrowse link
G PMM2 phosphomannomutase 2 IAGP ClinVar Annotator: match by term: Focal sclerosis with hyalinosis ClinVar PMID:9140401 PMID:9497260 PMID:9781039 PMID:10386614 PMID:10527672 More... NCBI chr16:8,797,839...8,849,325
Ensembl chr16:8,788,823...8,862,534
JBrowse link
G RPGRIP1L RPGRIP1 like IAGP ClinVar Annotator: match by term: Focal sclerosis with hyalinosis ClinVar PMID:19430481 PMID:20301500 PMID:25741868 PMID:28492532 NCBI chr16:53,598,153...53,703,859
Ensembl chr16:53,598,153...53,703,938
JBrowse link
G SCARB2 scavenger receptor class B member 2 IAGP ClinVar Annotator: match by term: Focal sclerosis with hyalinosis ClinVar PMID:25741868 PMID:26467025 PMID:28492532 NCBI chr 4:76,158,737...76,234,532
Ensembl chr 4:76,158,737...76,234,536
JBrowse link
G SDCCAG8 SHH signaling and ciliogenesis regulator SDCCAG8 IAGP ClinVar Annotator: match by term: Focal sclerosis with hyalinosis ClinVar PMID:25741868 NCBI chr 1:243,256,041...243,500,091
Ensembl chr 1:243,256,034...243,500,091
JBrowse link
G SLC17A5 solute carrier family 17 member 5 IAGP ClinVar Annotator: match by term: Focal sclerosis with hyalinosis ClinVar PMID:25741868 PMID:28492532 PMID:29140481 NCBI chr 6:73,593,379...73,653,992
Ensembl chr 6:73,593,379...73,653,992
JBrowse link
G SMARCAL1 SNF2 related chromatin remodeling annealing helicase 1 IAGP ClinVar Annotator: match by term: Focal sclerosis with hyalinosis ClinVar PMID:11799392 PMID:15880370 PMID:16840568 PMID:17089404 PMID:18805831 More... NCBI chr 2:216,412,484...216,483,053
Ensembl chr 2:216,412,383...216,483,053
JBrowse link
G TRPC6 transient receptor potential cation channel subfamily C member 6 IAGP ClinVar Annotator: match by term: Focal sclerosis with hyalinosis ClinVar PMID:25741868 PMID:28492532 NCBI chr11:101,451,564...101,584,007
Ensembl chr11:101,451,564...101,872,562
JBrowse link
focal segmental glomerulosclerosis 2 term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G TRPC6 transient receptor potential cation channel subfamily C member 6 IAGP
ISS
EXP
ClinVar Annotator: match by term: Focal segmental glomerulosclerosis 2 | ClinVar Annotator: match by term: TRPC6-related condition
OMIM:603965
CTD Direct Evidence: marker/mechanism
OMIM
ClinVar
MouseDO
CTD
PMID:2298509 PMID:10200986 PMID:15879175 PMID:15924139 PMID:16199547 More... NCBI chr11:101,451,564...101,584,007
Ensembl chr11:101,451,564...101,872,562
JBrowse link
focal segmental glomerulosclerosis 3 term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CD2AP CD2 associated protein IAGP
ISS
ClinVar Annotator: match by term: CD2AP-related condition | ClinVar Annotator: match by term: Focal segmental glomerulosclerosis 3, susceptibility to
OMIM:607832
OMIM
ClinVar
MouseDO
PMID:9536098 PMID:10514378 PMID:12764198 PMID:17576681 PMID:17713465 More... NCBI chr 6:47,477,789...47,627,263
Ensembl chr 6:47,477,789...47,627,263
JBrowse link
G CD2AP-DT CD2AP divergent transcript IAGP ClinVar Annotator: match by term: Focal segmental glomerulosclerosis 3, susceptibility to ClinVar PMID:25741868 NCBI chr 6:47,477,243...47,478,072
Ensembl chr 6:47,476,441...47,478,160
JBrowse link
G LOC129996604 ATAC-STARR-seq lymphoblastoid silent region 17275 IAGP ClinVar Annotator: match by term: Focal segmental glomerulosclerosis 3, susceptibility to ClinVar PMID:25741868 NCBI chr 6:47,477,551...47,478,060 JBrowse link
Focal Segmental Glomerulosclerosis 4 term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G APOL1 apolipoprotein L1 susceptibility IAGP ClinVar Annotator: match by term: APOL1-related condition | ClinVar Annotator: match by term: Focal segmental glomerulosclerosis 4, susceptibility to OMIM
ClinVar
PMID:20635188 PMID:20647424 PMID:20668430 PMID:21997394 PMID:24033266 More... NCBI chr22:36,253,133...36,267,525
Ensembl chr22:36,253,071...36,267,530
JBrowse link
focal segmental glomerulosclerosis 5 term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADSS1 adenylosuccinate synthase 1 IAGP ClinVar Annotator: match by term: Focal segmental glomerulosclerosis 5 ClinVar PMID:28492532 NCBI chr14:104,724,229...104,747,325
Ensembl chr14:104,724,174...104,747,325
JBrowse link
G AHNAK2 AHNAK nucleoprotein 2 IAGP ClinVar Annotator: match by term: Focal segmental glomerulosclerosis 5 ClinVar PMID:28492532 NCBI chr14:104,937,253...104,978,374
Ensembl chr14:104,937,244...104,978,374
JBrowse link
G AKT1 AKT serine/threonine kinase 1 IAGP ClinVar Annotator: match by term: Focal segmental glomerulosclerosis 5 ClinVar PMID:28492532 NCBI chr14:104,769,349...104,795,748
Ensembl chr14:104,769,349...104,795,759
JBrowse link
G BRF1 BRF1 general transcription factor IIIB subunit IAGP ClinVar Annotator: match by term: Focal segmental glomerulosclerosis 5 ClinVar PMID:28492532 NCBI chr14:105,209,286...105,315,589
Ensembl chr14:105,209,286...105,315,589
JBrowse link
G BTBD6 BTB domain containing 6 IAGP ClinVar Annotator: match by term: Focal segmental glomerulosclerosis 5 ClinVar PMID:28492532 NCBI chr14:105,248,533...105,251,093
Ensembl chr14:105,248,533...105,251,093
JBrowse link
G CDCA4 cell division cycle associated 4 IAGP ClinVar Annotator: match by term: Focal segmental glomerulosclerosis 5 ClinVar PMID:28492532 NCBI chr14:105,009,573...105,021,083
Ensembl chr14:105,009,573...105,021,083
JBrowse link
G CEP170B centrosomal protein 170B IAGP ClinVar Annotator: match by term: Focal segmental glomerulosclerosis 5 ClinVar PMID:28492532 NCBI chr14:104,864,513...104,896,747
Ensembl chr14:104,865,268...104,896,747
JBrowse link
G CLBA1 clathrin binding box of aftiphilin containing 1 IAGP ClinVar Annotator: match by term: Focal segmental glomerulosclerosis 5 ClinVar PMID:28492532 NCBI chr14:104,985,788...105,001,274
Ensembl chr14:104,985,775...105,010,482
JBrowse link
G GPR132 G protein-coupled receptor 132 IAGP ClinVar Annotator: match by term: Focal segmental glomerulosclerosis 5 ClinVar PMID:28492532 NCBI chr14:105,049,395...105,065,430
Ensembl chr14:105,049,395...105,065,445
JBrowse link
G INF2 inverted formin 2 IAGP
EXP
ClinVar Annotator: match by term: Focal segmental glomerulosclerosis 5
ClinVar Annotator: match by term: Focal segmental glomerulosclerosis 5 | ClinVar Annotator: match by term: INF2-related condition
CTD Direct Evidence: marker/mechanism
OMIM
ClinVar
CTD
PMID:6054293 PMID:9536098 PMID:16199547 PMID:17576681 PMID:20023659 More... NCBI chr14:104,681,133...104,722,535
Ensembl chr14:104,681,146...104,722,535
JBrowse link
G JAG2 jagged canonical Notch ligand 2 IAGP ClinVar Annotator: match by term: Focal segmental glomerulosclerosis 5 ClinVar PMID:28492532 NCBI chr14:105,140,995...105,168,776
Ensembl chr14:105,140,982...105,168,824
JBrowse link
G LOC130056627 ATAC-STARR-seq lymphoblastoid silent region 6191 IAGP ClinVar Annotator: match by term: Focal segmental glomerulosclerosis 5 ClinVar PMID:25741868 NCBI chr14:104,689,642...104,689,731 JBrowse link
G LOC130056630 ATAC-STARR-seq lymphoblastoid silent region 6194 IAGP ClinVar Annotator: match by term: Focal segmental glomerulosclerosis 5 ClinVar PMID:9536098 PMID:16199547 PMID:17576681 PMID:25741868 PMID:28492532 NCBI chr14:104,708,728...104,708,877 JBrowse link
G NUDT14 nudix hydrolase 14 IAGP ClinVar Annotator: match by term: Focal segmental glomerulosclerosis 5 ClinVar PMID:28492532 NCBI chr14:105,172,939...105,181,312
Ensembl chr14:105,172,938...105,181,323
JBrowse link
G PACS2 phosphofurin acidic cluster sorting protein 2 IAGP ClinVar Annotator: match by term: Focal segmental glomerulosclerosis 5 ClinVar PMID:28492532 NCBI chr14:105,300,774...105,398,147
Ensembl chr14:105,300,563...105,398,147
JBrowse link
G PLD4 phospholipase D family member 4 IAGP ClinVar Annotator: match by term: Focal segmental glomerulosclerosis 5 ClinVar PMID:28492532 NCBI chr14:104,924,879...104,937,785
Ensembl chr14:104,924,713...104,937,761
JBrowse link
G SIVA1 SIVA1 apoptosis inducing factor IAGP ClinVar Annotator: match by term: Focal segmental glomerulosclerosis 5 ClinVar PMID:28492532 NCBI chr14:104,753,147...104,759,654
Ensembl chr14:104,753,147...104,768,494
JBrowse link
G ZBTB42 zinc finger and BTB domain containing 42 IAGP ClinVar Annotator: match by term: Focal segmental glomerulosclerosis 5 ClinVar PMID:28492532 NCBI chr14:104,800,554...104,804,712
Ensembl chr14:104,800,596...104,804,712
JBrowse link
focal segmental glomerulosclerosis 6 term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LDHAL6B lactate dehydrogenase A like 6B IAGP ClinVar Annotator: match by term: Focal segmental glomerulosclerosis 6 ClinVar PMID:25741868 NCBI chr15:59,206,843...59,208,588
Ensembl chr15:59,206,843...59,208,588
JBrowse link
G LOC112272600 Sharpr-MPRA regulatory region 4265 IAGP ClinVar Annotator: match by term: Focal segmental glomerulosclerosis 6 ClinVar PMID:25741868 PMID:28492532 NCBI chr15:59,138,210...59,138,504 JBrowse link
G MYO1E myosin IE IAGP ClinVar Annotator: match by term: Focal segmental glomerulosclerosis 6 | ClinVar Annotator: match by term: MYO1E-related condition OMIM
ClinVar
PMID:9536098 PMID:17576681 PMID:21756023 PMID:25741868 PMID:28492532 More... NCBI chr15:59,132,434...59,372,871
Ensembl chr15:59,132,434...59,372,871
JBrowse link
focal segmental glomerulosclerosis 7 term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC110120845 VISTA enhancer hs229 IAGP ClinVar Annotator: match by term: Focal segmental glomerulosclerosis 7 ClinVar NCBI chr10:100,786,833...100,789,007 JBrowse link
G PAX2 paired box 2 IAGP ClinVar Annotator: match by term: Focal segmental glomerulosclerosis 7 OMIM
ClinVar
PMID:3077329 PMID:3377002 PMID:8589702 PMID:9106533 PMID:10466411 More... NCBI chr10:100,735,396...100,829,944
Ensembl chr10:100,735,396...100,829,944
JBrowse link
focal segmental glomerulosclerosis 8 term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ANLN anillin, actin binding protein IAGP ClinVar Annotator: match by term: Focal segmental glomerulosclerosis 8
ClinVar Annotator: match by term: ANLN-related condition
ClinVar Annotator: match by term: ANLN-related condition | ClinVar Annotator: match by term: Focal segmental glomerulosclerosis 8
OMIM
ClinVar
PMID:24676636 PMID:25741868 PMID:28106320 PMID:28492532 PMID:29869118 More... NCBI chr 7:36,389,862...36,453,791
Ensembl chr 7:36,389,821...36,453,791
JBrowse link
G SYNPO synaptopodin IAGP ClinVar Annotator: match by term: Focal segmental glomerulosclerosis 8 ClinVar PMID:25741868 PMID:33615071 NCBI chr 5:150,586,010...150,659,207
Ensembl chr 5:150,601,080...150,659,207
JBrowse link
focal segmental glomerulosclerosis 9 term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CRB2 crumbs cell polarity complex component 2 IAGP ClinVar Annotator: match by term: Focal segmental glomerulosclerosis 9 ClinVar
OMIM
PMID:25557779 PMID:25741868 PMID:26795916 PMID:27004616 PMID:27942854 More... NCBI chr 9:123,354,065...123,380,326
Ensembl chr 9:123,356,170...123,380,324
JBrowse link
Focal Segmental Glomerulosclerosis and Neurodevelopmental Syndrome term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G TRIM8 tripartite motif containing 8 IAGP ClinVar Annotator: match by term: Focal segmental glomerulosclerosis and neurodevelopmental syndrome | ClinVar Annotator: match by term: TRIM8-related condition OMIM
ClinVar
PMID:25741868 PMID:27346735 PMID:28492532 PMID:29758562 PMID:30244534 More... NCBI chr10:102,644,479...102,658,319
Ensembl chr10:102,642,503...102,662,789
JBrowse link
Glomerulonephritis with Isolated C3 Deposits and Factor H Deficiency term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CFH complement factor H IAGP
ISO
DNA:SNPs,Haplotype:: RGD PMID:17517971 PMID:17517971 RGD:7364995, RGD:7364995 NCBI chr 1:196,652,043...196,747,504
Ensembl chr 1:196,651,754...196,752,476
JBrowse link
Glomerulopathy with Giant Fibrillar Deposits term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATIC 5-aminoimidazole-4-carboxamide ribonucleotide formyltransferase/IMP cyclohydrolase IAGP ClinVar Annotator: match by term: Glomerulopathy with fibronectin deposits 2 ClinVar PMID:25741868 PMID:28492532 PMID:29100092 PMID:32200603 NCBI chr 2:215,312,059...215,368,592
Ensembl chr 2:215,311,956...215,349,773
JBrowse link
G FN1 fibronectin 1 IAGP
EXP
ClinVar Annotator: match by term: Glomerulopathy with fibronectin deposits 2
CTD Direct Evidence: marker/mechanism
OMIM
ClinVar
CTD
PMID:1544672 PMID:7564073 PMID:7747733 PMID:9536098 PMID:12042895 More... NCBI chr 2:215,360,865...215,436,068
Ensembl chr 2:215,360,440...215,436,073
JBrowse link
G FN1-DT FN1 divergent transcript IAGP ClinVar Annotator: match by term: Glomerulopathy with fibronectin deposits 2 ClinVar PMID:25741868 PMID:28492532 NCBI chr 2:215,435,691...215,438,945 JBrowse link
G INF2 inverted formin 2 IAGP ClinVar Annotator: match by term: Glomerulopathy with fibronectin deposits 2 ClinVar PMID:25741868 NCBI chr14:104,681,133...104,722,535
Ensembl chr14:104,681,146...104,722,535
JBrowse link
G LOC122861289 Sharpr-MPRA regulatory region 10603 IAGP ClinVar Annotator: match by term: Glomerulopathy with fibronectin deposits 2 ClinVar PMID:25741868 PMID:28492532 PMID:29100092 PMID:32200603 NCBI chr 2:215,420,546...215,420,840 JBrowse link
G LOC126806496 CDK7 strongly-dependent group 2 enhancer GRCh37_chr2:216240057-216241256 IAGP ClinVar Annotator: match by term: Glomerulopathy with fibronectin deposits 2 ClinVar PMID:18268355 PMID:25741868 PMID:28492532 PMID:29100092 NCBI chr 2:215,375,334...215,376,533 JBrowse link
G LOC126806497 BRD4-independent group 4 enhancer GRCh37_chr2:216255920-216257119 IAGP ClinVar Annotator: match by term: Glomerulopathy with fibronectin deposits 2 ClinVar PMID:25741868 PMID:28492532 NCBI chr 2:215,391,197...215,392,396 JBrowse link
G LOC126806498 CDK7 strongly-dependent group 2 enhancer GRCh37_chr2:216288045-216289244 IAGP ClinVar Annotator: match by term: Glomerulopathy with fibronectin deposits 2 ClinVar PMID:25741868 PMID:28492532 PMID:29100092 PMID:32200603 NCBI chr 2:215,423,322...215,424,521 JBrowse link
G LOC126806499 CDK7 strongly-dependent group 2 enhancer GRCh37_chr2:216298103-216299302 IAGP ClinVar Annotator: match by term: Glomerulopathy with fibronectin deposits 2 ClinVar PMID:25741868 PMID:28492532 NCBI chr 2:215,433,380...215,434,579 JBrowse link
glomerulosclerosis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACE angiotensin I converting enzyme treatment ISO RGD PMID:21718676 RGD:12879389 NCBI chr17:63,477,061...63,498,373
Ensembl chr17:63,477,061...63,498,380
JBrowse link
G AGER advanced glycosylation end-product specific receptor treatment ISO associated with Diabetic Nephropathies RGD PMID:23046363 PMID:20554645 RGD:7243247, RGD:7244139 NCBI chr 6:32,180,969...32,184,253
Ensembl chr 6:32,180,968...32,184,322
JBrowse link
G AGTR1 angiotensin II receptor type 1 ISO mRNA:decreased expression:kidney RGD PMID:12495295 RGD:6903859 NCBI chr 3:148,697,903...148,743,003
Ensembl chr 3:148,697,784...148,743,008
JBrowse link
G AGTR2 angiotensin II receptor type 2 ISO associated with Kidney Failure, Chronic
mRNA:increased expression:kidney
RGD PMID:20042458 PMID:20631980 PMID:12495295 RGD:6903284, RGD:6903882, RGD:6903859 NCBI chr  X:116,170,744...116,174,974
Ensembl chr  X:116,170,744...116,174,974
JBrowse link
G APOE apolipoprotein E ISO protein:increased expression:renal glomerulus (rat) RGD PMID:22207560 PMID:21907828 RGD:6903199, RGD:6903285 NCBI chr19:44,905,796...44,909,393
Ensembl chr19:44,905,791...44,909,393
JBrowse link
G COL3A1 collagen type III alpha 1 chain ISO RGD PMID:20610530 RGD:7257557 NCBI chr 2:188,974,373...189,012,746
Ensembl chr 2:188,974,373...189,012,746
JBrowse link
G ESR2 estrogen receptor 2 susceptibility ISO protein:decreased expression:renal glomerulus (mouse) RGD PMID:12000739 RGD:7364801 NCBI chr14:64,226,707...64,338,613
Ensembl chr14:64,084,232...64,338,112
JBrowse link
G FBN1 fibrillin 1 ISO associated with Hypertension RGD PMID:16380460 RGD:7365080 NCBI chr15:48,408,313...48,645,709
Ensembl chr15:48,408,313...48,645,721
JBrowse link
G HBEGF heparin binding EGF like growth factor induced IDA RGD PMID:16107576 RGD:1556472 NCBI chr 5:140,332,843...140,346,603
Ensembl chr 5:140,332,843...140,346,603
JBrowse link
G IL1B interleukin 1 beta ISO associated with Hypertension RGD PMID:19948880 RGD:7175503 NCBI chr 2:112,829,751...112,836,779
Ensembl chr 2:112,829,751...112,836,816
JBrowse link
G MMP1 matrix metallopeptidase 1 ISO associated with Hyperhomocysteinemia
protein:decreased expression:kidney (rat)
RGD PMID:20406136 PMID:21275176 RGD:7207203, RGD:7207363 NCBI chr11:102,789,919...102,798,160
Ensembl chr11:102,789,401...102,798,160
JBrowse link
G MMP9 matrix metallopeptidase 9 ISO associated with Hyperhomocysteinemia
associated with Obesity;mRNA:decreased expression:glomerulus
RGD PMID:20406136 PMID:9300240 RGD:7207203, RGD:8547929 NCBI chr20:46,008,908...46,016,561
Ensembl chr20:46,008,908...46,016,561
JBrowse link
G NPHS1 NPHS1 adhesion molecule, nephrin treatment ISO RGD PMID:22125642 RGD:40902998 NCBI chr19:35,862,915...35,869,357
Ensembl chr19:35,825,964...35,869,287
JBrowse link
G PAX2 paired box 2 IAGP ClinVar Annotator: match by term: Glomerulosclerosis ClinVar PMID:3377002 PMID:8589702 PMID:9106533 PMID:11093271 PMID:11241473 More... NCBI chr10:100,735,396...100,829,944
Ensembl chr10:100,735,396...100,829,944
JBrowse link
G PLA2G7 phospholipase A2 group VII IMP RGD PMID:16213192 RGD:7248790 NCBI chr 6:46,704,201...46,735,721
Ensembl chr 6:46,704,201...46,735,693
JBrowse link
G PLEKHA7 pleckstrin homology domain containing A7 ameliorates ISO compared to wild type RGD PMID:25136115 PMID:25136115 RGD:11079199, RGD:11079199 NCBI chr11:16,777,297...17,014,414
Ensembl chr11:16,777,297...17,014,415
JBrowse link
G PPARG peroxisome proliferator activated receptor gamma treatment ISO RGD PMID:11318962 RGD:8553043 NCBI chr 3:12,287,368...12,434,344
Ensembl chr 3:12,287,368...12,434,356
JBrowse link
G RGS2 regulator of G protein signaling 2 susceptibility ISO associated with Hypertension RGD PMID:26606876 RGD:13524570 NCBI chr 1:192,809,039...192,812,275
Ensembl chr 1:192,809,039...192,812,275
JBrowse link
G RNLS renalase, FAD dependent amine oxidase ISO RGD PMID:24022426 RGD:7327155 NCBI chr10:88,171,523...88,583,318
Ensembl chr10:88,273,864...88,584,530
JBrowse link
G SERPINE1 serpin family E member 1 treatment ISO mRNA, protein:increased expression:kidney (rat) RGD PMID:26999660 PMID:27129290 RGD:11073618, RGD:11073688 NCBI chr 7:101,127,104...101,139,247
Ensembl chr 7:101,127,104...101,139,247
JBrowse link
G SHC1 SHC adaptor protein 1 ameliorates ISO compared to SS/JrHsdMcwi RGD PMID:27270176 RGD:12792230 NCBI chr 1:154,962,298...154,974,376
Ensembl chr 1:154,962,298...154,974,395
JBrowse link
G SLC2A1 solute carrier family 2 member 1 ISO RGD PMID:19918242 RGD:12879501 NCBI chr 1:42,925,353...42,958,868
Ensembl chr 1:42,925,353...42,958,893
JBrowse link
G SPP1 secreted phosphoprotein 1 ISO RGD PMID:12675855 RGD:6903837 NCBI chr 4:87,975,714...87,983,411
Ensembl chr 4:87,975,667...87,983,532
JBrowse link
G SYNPO synaptopodin treatment ISO RGD PMID:22125642 RGD:40902998 NCBI chr 5:150,586,010...150,659,207
Ensembl chr 5:150,601,080...150,659,207
JBrowse link
G TNFRSF1B TNF receptor superfamily member 1B ISO associated with Hypertension RGD PMID:23389459 RGD:7245475 NCBI chr 1:12,166,991...12,209,220
Ensembl chr 1:12,166,991...12,209,228
JBrowse link
hypotrichosis-lymphedema-telangiectasia-renal defect syndrome term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC130066420 ATAC-STARR-seq lymphoblastoid silent region 13204 IAGP ClinVar Annotator: match by term: Hypotrichosis-lymphedema-telangiectasia-renal defect syndrome ClinVar PMID:25741868 NCBI chr20:64,049,329...64,049,378 JBrowse link
G SOX18 SRY-box transcription factor 18 IAGP ClinVar Annotator: match by term: Hypotrichosis-lymphedema-telangiectasia-renal defect syndrome
ClinVar Annotator: match by term: Glomerulonephritis with sparse hair and telangiectases | ClinVar Annotator: match by term: Hypotrichosis-lymphedema-telangiectasia-renal defect syndrome
ClinVar
OMIM
PMID:2484451 PMID:12740761 PMID:24697860 PMID:25741868 PMID:28492532 More... NCBI chr20:64,047,582...64,049,639
Ensembl chr20:64,047,582...64,049,639
JBrowse link
IgA glomerulonephritis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACE angiotensin I converting enzyme disease_progression IEA
IAGP
EXP
ClinVar Annotator: match by term: Susceptibility to progression to renal failure in IgA nephropathy
CTD Direct Evidence: marker/mechanism
DNA:polymorphism:intron:
ClinVar
CTD
RGD
PMID:1313972 PMID:1319114 PMID:1328889 PMID:1386652 PMID:1976655 More... RGD:1331525, RGD:7257515 NCBI chr17:63,477,061...63,498,373
Ensembl chr17:63,477,061...63,498,380
JBrowse link
G ACSM3 acyl-CoA synthetase medium chain family member 3 disease_progression IAGP DNA:polymorphism: : RGD PMID:12484505 RGD:7241283 NCBI chr16:20,674,405...20,797,581
Ensembl chr16:20,610,243...20,797,581
JBrowse link
G ADAM10 ADAM metallopeptidase domain 10 EXP CTD Direct Evidence: marker/mechanism CTD PMID:32715474 NCBI chr15:58,588,809...58,749,707
Ensembl chr15:58,588,809...58,749,791
JBrowse link
G ADD1 adducin 1 disease_progression IAGP DNA:polymorphism:cds:rs4961(human) RGD PMID:19838659 RGD:7174725 NCBI chr 4:2,843,844...2,930,062
Ensembl chr 4:2,843,844...2,930,076
JBrowse link
G ADD2 adducin 2 disease_progression IAGP DNA:polymorphism:cds: rs4984(human) RGD PMID:19838659 RGD:7174725 NCBI chr 2:70,656,784...70,768,200
Ensembl chr 2:70,607,618...70,768,225
JBrowse link
G AGT angiotensinogen EXP CTD Direct Evidence: marker/mechanism CTD PMID:9259580 NCBI chr 1:230,702,523...230,745,583
Ensembl chr 1:230,690,776...230,745,576
JBrowse link
G AGTR1 angiotensin II receptor type 1 IEP protein:increased expression:kidney tubule RGD PMID:15930094 RGD:6903851 NCBI chr 3:148,697,903...148,743,003
Ensembl chr 3:148,697,784...148,743,008
JBrowse link
G AGTR2 angiotensin II receptor type 2 disease_progression IAGP
IEP
DNA:polymorphism: :1818A>T (human)
protein:increased expression:kidney tubule
RGD PMID:19194560 PMID:15930094 RGD:6903844, RGD:6903851 NCBI chr  X:116,170,744...116,174,974
Ensembl chr  X:116,170,744...116,174,974
JBrowse link
G AURKB aurora kinase B EXP CTD Direct Evidence: marker/mechanism CTD PMID:25133636 NCBI chr17:8,204,731...8,210,575
Ensembl chr17:8,204,733...8,210,600
JBrowse link
G B4GALT1 beta-1,4-galactosyltransferase 1 ISS OMIM:161950 | OMIM:616818 MouseDO NCBI chr 9:33,104,077...33,185,089
Ensembl chr 9:33,100,493...33,167,336
JBrowse link
G C1QA complement C1q A chain EXP CTD Direct Evidence: marker/mechanism CTD PMID:8840296 PMID:25133636 NCBI chr 1:22,636,463...22,639,678
Ensembl chr 1:22,635,077...22,639,678
JBrowse link
G C1QB complement C1q B chain EXP CTD Direct Evidence: marker/mechanism CTD PMID:25133636 NCBI chr 1:22,653,236...22,661,637
Ensembl chr 1:22,652,762...22,661,637
JBrowse link
G C2 complement C2 EXP CTD Direct Evidence: marker/mechanism CTD PMID:25133636 NCBI chr 6:31,897,783...31,945,672
Ensembl chr 6:31,897,785...31,945,673
JBrowse link
G C3 complement C3 IEP mRNA,protein:increased expression, increased activity:kidney RGD PMID:11287758 RGD:7175543 NCBI chr19:6,677,704...6,720,650
Ensembl chr19:6,677,704...6,730,562
JBrowse link
G CARD9 caspase recruitment domain family member 9 EXP CTD Direct Evidence: marker/mechanism CTD PMID:25305756 NCBI chr 9:136,363,956...136,373,669
Ensembl chr 9:136,363,956...136,373,681
JBrowse link
G CCL2 C-C motif chemokine ligand 2 ISO protein:increased expression:kidney RGD PMID:18433541 RGD:2307041 NCBI chr17:34,255,285...34,257,203
Ensembl chr17:34,255,274...34,257,208
JBrowse link
G CCL20 C-C motif chemokine ligand 20 disease_progression IEP RGD PMID:23192593 RGD:7483632 NCBI chr 2:227,813,842...227,817,556
Ensembl chr 2:227,805,739...227,817,564
JBrowse link
G CCR6 C-C motif chemokine receptor 6 disease_progression IEP RGD PMID:23192593 RGD:7483632 NCBI chr 6:167,111,795...167,139,141
Ensembl chr 6:167,111,807...167,139,141
JBrowse link
G CD14 CD14 molecule disease_progression IAGP DNA:polymorphism:promoter:c. -159C>T (human) RGD PMID:12566518 RGD:7204499 NCBI chr 5:140,631,732...140,633,701
Ensembl chr 5:140,631,728...140,633,700
JBrowse link
G CD163 CD163 molecule EXP CTD Direct Evidence: marker/mechanism CTD PMID:25133636 NCBI chr12:7,470,811...7,503,777
Ensembl chr12:7,470,811...7,503,893
JBrowse link
G CD44 CD44 molecule (IN blood group) EXP CTD Direct Evidence: marker/mechanism CTD PMID:25133636 NCBI chr11:35,139,171...35,232,402
Ensembl chr11:35,138,882...35,232,402
JBrowse link
G CFB complement factor B disease_progression IEP
IAGP
mRNA:increased expression:kidney
protein:increased expression:serum
RGD PMID:8567024 PMID:17385664 PMID:3118258 RGD:7242737, RGD:7242759, RGD:7242754 NCBI chr 6:31,946,095...31,952,084
Ensembl chr 6:31,945,650...31,952,086
JBrowse link
G CFHR1 complement factor H related 1 EXP CTD Direct Evidence: marker/mechanism CTD PMID:21399633 NCBI chr 1:196,819,731...196,832,189
Ensembl chr 1:196,819,731...196,837,159
JBrowse link
G CFHR3 complement factor H related 3 EXP CTD Direct Evidence: marker/mechanism CTD PMID:21399633 NCBI chr 1:196,774,840...196,795,407
Ensembl chr 1:196,774,813...196,795,407
JBrowse link
G CHGA chromogranin A IAGP associated with Hypertension;DNA:polymorphism:promoter:-415T>C (human) RGD PMID:20113265 RGD:6906902 NCBI chr14:92,922,664...92,935,285
Ensembl chr14:92,923,150...92,935,285
JBrowse link
G CORO1C coronin 1C EXP CTD Direct Evidence: marker/mechanism CTD PMID:25133636 NCBI chr12:108,645,109...108,731,518
Ensembl chr12:108,645,109...108,731,526
JBrowse link
G CXCR2 C-X-C motif chemokine receptor 2 IAGP DNA:SNPs: :rs4674257, rs4674259 (human) RGD PMID:21214373 RGD:7257677 NCBI chr 2:218,125,294...218,137,251
Ensembl chr 2:218,125,289...218,137,251
JBrowse link
G DEFA5 defensin alpha 5 EXP CTD Direct Evidence: marker/mechanism CTD PMID:22197929 PMID:25305756 NCBI chr 8:7,055,304...7,056,739
Ensembl chr 8:7,055,304...7,056,739
JBrowse link
G FABP1 fatty acid binding protein 1 IEP protein:increased expression:urine (human) RGD PMID:16118482 RGD:1578453 NCBI chr 2:88,122,982...88,128,062
Ensembl chr 2:88,122,982...88,128,062
JBrowse link
G FAS Fas cell surface death receptor treatment ISO RGD PMID:29844269 RGD:13792576 NCBI chr10:88,964,050...89,017,059
Ensembl chr10:88,953,813...89,029,605
JBrowse link
G FCAR Fc alpha receptor IEP
IMP
RGD PMID:22451718 PMID:21985370 RGD:7242063, RGD:7242167 NCBI chr19:54,874,235...54,891,420
Ensembl chr19:54,874,235...54,891,420
JBrowse link
G FCGR3A Fc gamma receptor IIIa disease_progression IAGP DNA:polymorphism:exon:p.F176V(human) RGD PMID:16221721 RGD:5508463 NCBI chr 1:161,541,759...161,550,737
Ensembl chr 1:161,541,759...161,550,968
JBrowse link
G FN1 fibronectin 1 IEP protein:increased expression:kidney RGD PMID:15925904 RGD:7206844 NCBI chr 2:215,360,865...215,436,068
Ensembl chr 2:215,360,440...215,436,073
JBrowse link
G FOXM1 forkhead box M1 EXP CTD Direct Evidence: marker/mechanism CTD PMID:25133636 NCBI chr12:2,857,680...2,877,174
Ensembl chr12:2,857,680...2,877,174
JBrowse link
G GPR183 G protein-coupled receptor 183 EXP CTD Direct Evidence: marker/mechanism CTD PMID:25133636 NCBI chr13:99,294,539...99,307,399
Ensembl chr13:99,294,539...99,307,399
JBrowse link
G HAVCR1 hepatitis A virus cellular receptor 1 IEP protein:increased expression:urine: RGD PMID:23135864 PMID:21467131 RGD:7245479, RGD:7245983 NCBI chr 5:157,029,413...157,069,407
Ensembl chr 5:157,026,742...157,069,396
JBrowse link
G HLA-DQB1 major histocompatibility complex, class II, DQ beta 1 disease_progression EXP
IAGP
CTD Direct Evidence: marker/mechanism
DNA:polymorphism: :HLA-DQB1*0301(human)
CTD
RGD
PMID:25305756 PMID:7638860 RGD:36174018 NCBI chr 6:32,659,467...32,666,657
Ensembl chr 6:32,659,467...32,668,383
JBrowse link
G HPSE heparanase EXP CTD Direct Evidence: marker/mechanism CTD PMID:25133636 NCBI chr 4:83,292,461...83,335,153
Ensembl chr 4:83,292,461...83,335,153
JBrowse link
G IGF1R insulin like growth factor 1 receptor IAGP DNA: snp::rs2229765 RGD PMID:21047277 RGD:7242795 NCBI chr15:98,648,539...98,964,530
Ensembl chr15:98,648,539...98,964,530
JBrowse link
G IL18 interleukin 18 IEP RGD PMID:22518072 RGD:6893446 NCBI chr11:112,143,260...112,164,094
Ensembl chr11:112,143,251...112,164,096
JBrowse link
G IL1A interleukin 1 alpha no_association IAGP DNA:SNP:promoter RGD PMID:21049406 RGD:6907116 NCBI chr 2:112,773,925...112,784,493
Ensembl chr 2:112,773,925...112,784,493
JBrowse link
G IL1B interleukin 1 beta no_association IAGP DNA:SNPs: :rs1143627, rs3917356, rs1143633 (human) RGD PMID:19280228 PMID:21049406 RGD:6907082, RGD:6907116 NCBI chr 2:112,829,751...112,836,779
Ensembl chr 2:112,829,751...112,836,816
JBrowse link
G IL1RN interleukin 1 receptor antagonist susceptibility IAGP
IDA
ISO
IEP
DNA:repeats:intron:IVS2+914_1000dup IL1RN*2 (human)
mouse model treated with human protein
response to immunoglobulin therapy
rat model treated with human protein
protein:decreased expression:serum, urine (human)
DNA:polymorphisms:intron, 3' utr:IVS1+1890G>T, IVS1+8796A>G, *138C>G (rs928940, rs439154, rs315951) (human)
RGD PMID:10916103 PMID:9370186 PMID:9844059 PMID:10079261 PMID:10566895 More... RGD:6906961, RGD:6909150, RGD:6909132, RGD:6909131, RGD:6907427, RGD:6907414, RGD:6907082 NCBI chr 2:113,099,360...113,134,014
Ensembl chr 2:113,099,315...113,134,016
JBrowse link
G KIF15 kinesin family member 15 EXP CTD Direct Evidence: marker/mechanism CTD PMID:25133636 NCBI chr 3:44,761,794...44,868,687
Ensembl chr 3:44,761,721...44,873,376
JBrowse link
G LAIR1 leukocyte associated immunoglobulin like receptor 1 EXP CTD Direct Evidence: marker/mechanism CTD PMID:25133636 NCBI chr19:54,351,384...54,376,088
Ensembl chr19:54,351,384...54,370,558
JBrowse link
G LAPTM5 lysosomal protein transmembrane 5 EXP CTD Direct Evidence: marker/mechanism CTD PMID:25133636 NCBI chr 1:30,732,469...30,757,774
Ensembl chr 1:30,732,469...30,757,774
JBrowse link
G LCN2 lipocalin 2 IEP protein:increased expression:urine: RGD PMID:21467131 RGD:7245983 NCBI chr 9:128,149,453...128,153,453
Ensembl chr 9:128,149,071...128,153,453
JBrowse link
G LHFPL2 LHFPL tetraspan subfamily member 2 EXP CTD Direct Evidence: marker/mechanism CTD PMID:25133636 NCBI chr 5:78,485,230...78,648,772
Ensembl chr 5:78,485,215...78,770,021
JBrowse link
G MAN2B1 mannosidase alpha class 2B member 1 EXP CTD Direct Evidence: marker/mechanism CTD PMID:25133636 NCBI chr19:12,646,512...12,666,742
Ensembl chr19:12,643,831...12,666,742
JBrowse link
G MERTK MER proto-oncogene, tyrosine kinase EXP CTD Direct Evidence: marker/mechanism CTD PMID:25133636 NCBI chr 2:111,898,607...112,029,561
Ensembl chr 2:111,898,607...112,029,561
JBrowse link
G MIR20A microRNA 20a disease_progression IEP RGD PMID:29459010 RGD:25823149 NCBI chr13:91,351,065...91,351,135
Ensembl chr13:91,351,065...91,351,135
JBrowse link
G MMP14 matrix metallopeptidase 14 ISO mRNA:increased expression:glomerulus RGD PMID:9848780 RGD:2314955 NCBI chr14:22,836,585...22,847,758
Ensembl chr14:22,836,560...22,849,041
JBrowse link
G MS4A6A membrane spanning 4-domains A6A EXP CTD Direct Evidence: marker/mechanism CTD PMID:25133636 NCBI chr11:60,171,607...60,184,666
Ensembl chr11:60,171,607...60,184,666
JBrowse link
G MTR 5-methyltetrahydrofolate-homocysteine methyltransferase IAGP DNA:polymorphism:Cds :2756A>G(human) RGD PMID:21737517 RGD:7207085 NCBI chr 1:236,795,281...236,903,981
Ensembl chr 1:236,795,260...236,921,278
JBrowse link
G MUC20 mucin 20, cell surface associated disease_progression IAGP DNA:repeat RGD PMID:16508246 RGD:7364789 NCBI chr 3:195,720,978...195,733,551
Ensembl chr 3:195,720,884...195,741,123
JBrowse link
G NGF nerve growth factor IAGP DNA:SNP: :rs11102930 (human) RGD PMID:21178826 RGD:7242801 NCBI chr 1:115,285,917...115,338,249
Ensembl chr 1:115,285,904...115,338,770
JBrowse link
G NOTCH2 notch receptor 2 EXP CTD Direct Evidence: marker/mechanism CTD PMID:32715474 NCBI chr 1:119,911,553...120,069,662
Ensembl chr 1:119,911,553...120,100,779
JBrowse link
G OTUB1 OTU deubiquitinase, ubiquitin aldehyde binding 1 IEP protein:increased expression:kidney RGD PMID:22279542 RGD:7175260 NCBI chr11:63,986,438...63,998,412
Ensembl chr11:63,985,853...64,001,811
JBrowse link
G PDE5A phosphodiesterase 5A IAGP DNA:SNP: :rs13124532(human) RGD PMID:20563733 RGD:7248685 NCBI chr 4:119,494,403...119,628,804
Ensembl chr 4:119,494,397...119,628,804
JBrowse link
G PIGR polymeric immunoglobulin receptor IAGP ClinVar Annotator: match by term: IgA glomerulonephritis ClinVar PMID:12740691 PMID:16282702 NCBI chr 1:206,928,522...206,946,466
Ensembl chr 1:206,928,522...206,946,466
JBrowse link
G PLA2G7 phospholipase A2 group VII disease_progression IAGP DNA:polymorphism:exon: RGD PMID:12220450 RGD:7257515 NCBI chr 6:46,704,201...46,735,721
Ensembl chr 6:46,704,201...46,735,693
JBrowse link
G PLAU plasminogen activator, urokinase EXP CTD Direct Evidence: therapeutic CTD PMID:9002298 NCBI chr10:73,909,164...73,917,494
Ensembl chr10:73,909,177...73,917,496
JBrowse link
G PRC1 protein regulator of cytokinesis 1 EXP CTD Direct Evidence: marker/mechanism CTD PMID:25133636 NCBI chr15:90,966,040...90,994,535
Ensembl chr15:90,966,040...90,995,629
JBrowse link
G SCGB1A1 secretoglobin family 1A member 1 disease_progression IAGP
ISS
OMIM:161950 | OMIM:616818 MouseDO
RGD
PMID:11967037 RGD:6903255 NCBI chr11:62,419,033...62,423,195
Ensembl chr11:62,405,103...62,423,195
JBrowse link
G SELE selectin E IAGP DNA:SNP:exon:p.H468Y (human)
ClinVar Annotator: match by term: IgA nephropathy, susceptibility to
ClinVar
RGD
PMID:11828340 PMID:16282702 PMID:11828340 RGD:1625253 NCBI chr 1:169,722,640...169,734,079
Ensembl chr 1:169,722,640...169,764,705
JBrowse link
G SELL selectin L IEP
IAGP
RGD PMID:17452405 PMID:11828340 RGD:7175290, RGD:1625253 NCBI chr 1:169,690,667...169,711,620
Ensembl chr 1:169,690,665...169,711,702
JBrowse link
G SERPINB7 serpin family B member 7 disease_progression IAGP DNA:SNPs:3' utr:2093C>T, 2180C>T (human)
DNA:SNP:5' utr, exon:267G>A (human)
DNA:SNP: :23167A>G (human)
RGD PMID:18793525 PMID:16796905 PMID:16550745 RGD:7207366, RGD:7207380, RGD:7207372 NCBI chr18:63,753,057...63,805,370
Ensembl chr18:63,752,935...63,805,376
JBrowse link
G SHH sonic hedgehog signaling molecule IEP RGD PMID:24744439 RGD:12859042 NCBI chr 7:155,799,980...155,812,463
Ensembl chr 7:155,799,980...155,812,463
JBrowse link
G SLC43A3 solute carrier family 43 member 3 EXP CTD Direct Evidence: marker/mechanism CTD PMID:25133636 NCBI chr11:57,406,954...57,427,580
Ensembl chr11:57,406,954...57,427,580
JBrowse link
G SPRY2 sprouty RTK signaling antagonist 2 susceptibility IAGP
EXP
ClinVar Annotator: match by term: IgA nephropathy, susceptibility to, 3
CTD Direct Evidence: marker/mechanism
ClinVar
CTD
OMIM
PMID:25741868 PMID:25782674 NCBI chr13:80,335,976...80,341,126
Ensembl chr13:80,335,976...80,341,126
JBrowse link
G ST6GALNAC2 ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 2 EXP CTD Direct Evidence: marker/mechanism CTD PMID:17480010 NCBI chr17:76,565,377...76,585,860
Ensembl chr17:76,565,377...76,586,956
JBrowse link
G STAT4 signal transducer and activator of transcription 4 disease_progression
no_association
IAGP DNA:SNP: :rs7561832 (human)
DNA:SNP:intron:c.274-28828C>G (rs10181656) (human)
RGD PMID:20045654 PMID:20479942 RGD:7207872, RGD:7207878 NCBI chr 2:191,029,576...191,151,596
Ensembl chr 2:191,029,576...191,178,435
JBrowse link
G TGFB1 transforming growth factor beta 1 EXP CTD Direct Evidence: marker/mechanism CTD PMID:11728950 NCBI chr19:41,330,323...41,353,922
Ensembl chr19:41,301,587...41,353,922
JBrowse link
G TIMP1 TIMP metallopeptidase inhibitor 1 EXP CTD Direct Evidence: marker/mechanism CTD PMID:25133636 NCBI chr  X:47,582,436...47,586,789
Ensembl chr  X:47,582,408...47,586,789
JBrowse link
G TLR1 toll like receptor 1 susceptibility IAGP DNA:snps:promoter, cds:g.-414C>T, p.N248S (rs5743557, rs4833095) (human) RGD PMID:21108742 RGD:7246898 NCBI chr 4:38,787,569...38,805,644
Ensembl chr 4:38,787,555...38,856,817
JBrowse link
G TLR9 toll like receptor 9 severity
treatment
ISO
IAGP
DNA, mRNA:SNP, increased expression:exon, spleen:g.159C>G (mouse)
associated with Graft vs Host Disease; mRNA:increased expression:splenocyte (mouse)
DNA:SNPs:intron, exon:IVS4-44A>G, c.1635G>A (rs352139, rs352140) (human)
RGD PMID:18776126 PMID:21621468 PMID:21621468 PMID:18776126 RGD:7246889, RGD:7246893, RGD:7246893, RGD:7246889 NCBI chr 3:52,221,080...52,225,645
Ensembl chr 3:52,221,080...52,225,645
JBrowse link
G TNF tumor necrosis factor treatment IEP RGD PMID:9844059 RGD:6909132 NCBI chr 6:31,575,565...31,578,336
Ensembl chr 6:31,575,565...31,578,336
JBrowse link
G TNFRSF1A TNF receptor superfamily member 1A treatment IEP
IDA
protein:increased expression:serum RGD PMID:16209246 PMID:9844059 RGD:6907414, RGD:6909132 NCBI chr12:6,328,771...6,342,076
Ensembl chr12:6,328,757...6,342,114
JBrowse link
G TNFRSF1B TNF receptor superfamily member 1B treatment IEP
IDA
protein:increased expression:serum RGD PMID:16209246 PMID:9844059 RGD:6907414, RGD:6909132 NCBI chr 1:12,166,991...12,209,220
Ensembl chr 1:12,166,991...12,209,228
JBrowse link
G TNFSF13 TNF superfamily member 13 EXP CTD Direct Evidence: marker/mechanism CTD PMID:22197929 NCBI chr17:7,558,282...7,561,601
Ensembl chr17:7,558,292...7,561,608
JBrowse link
G TNFSF13B TNF superfamily member 13b ISS OMIM:161950 MouseDO NCBI chr13:108,269,629...108,308,484
Ensembl chr13:108,251,240...108,308,484
JBrowse link
G TNFSF14 TNF superfamily member 14 ISS OMIM:161950 MouseDO NCBI chr19:6,661,253...6,670,588
Ensembl chr19:6,658,085...6,670,588
JBrowse link
G VAV3 vav guanine nucleotide exchange factor 3 EXP CTD Direct Evidence: marker/mechanism CTD PMID:25305756 NCBI chr 1:107,571,161...107,965,180
Ensembl chr 1:107,571,161...107,965,180
JBrowse link
G VSIG4 V-set and immunoglobulin domain containing 4 EXP CTD Direct Evidence: marker/mechanism CTD PMID:25133636 NCBI chr  X:66,021,738...66,040,080
Ensembl chr  X:66,021,738...66,040,125
JBrowse link
G WAS WASP actin nucleation promoting factor ISS OMIM:161950 | OMIM:616818 MouseDO NCBI chr  X:48,676,636...48,691,427
Ensembl chr  X:48,676,596...48,691,431
JBrowse link
immune-complex glomerulonephritis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G MIR146A microRNA 146a ISO RGD PMID:31666653 RGD:126925182 NCBI chr 5:160,485,352...160,485,450
Ensembl chr 5:160,485,352...160,485,450
JBrowse link
lipoid nephrosis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CDKN1A cyclin dependent kinase inhibitor 1A treatment ISO RGD PMID:24119646 RGD:10043363 NCBI chr 6:36,676,463...36,687,332
Ensembl chr 6:36,676,460...36,687,397
JBrowse link
G IL13 interleukin 13 ISO RGD PMID:17429054 RGD:2290347 NCBI chr 5:132,656,522...132,661,110
Ensembl chr 5:132,656,263...132,661,110
JBrowse link
G IL17A interleukin 17A ISO Protein:increased expression:plasma (rat) RGD PMID:22772331 RGD:9068937 NCBI chr 6:52,186,375...52,190,638
Ensembl chr 6:52,186,375...52,190,638
JBrowse link
G LGALS1 galectin 1 ISO protein:decreased expression:glomerulus, podocytes (rat) RGD PMID:19079321 RGD:2316526 NCBI chr22:37,675,636...37,679,802
Ensembl chr22:37,675,636...37,679,802
JBrowse link
G LMX1B LIM homeobox transcription factor 1 beta IAGP ClinVar Annotator: match by term: Lipoid nephrosis ClinVar PMID:23687361 PMID:32581362 NCBI chr 9:126,613,928...126,701,032
Ensembl chr 9:126,613,928...126,701,032
JBrowse link
G NPHS1 NPHS1 adhesion molecule, nephrin EXP CTD Direct Evidence: marker/mechanism CTD PMID:18256598 NCBI chr19:35,825,372...35,852,504
Ensembl chr19:35,825,372...35,869,287
JBrowse link
G NR3C1 nuclear receptor subfamily 3 group C member 1 disease_progression IEP RGD PMID:17890747 RGD:7174718 NCBI chr 5:143,277,931...143,435,512
Ensembl chr 5:143,277,931...143,435,512
JBrowse link
G STAT6 signal transducer and activator of transcription 6 severity
no_association
IAGP DNA:polymorphism:3' utr:g.2964G>A (human)
DNA:polymorphism:3' utr:2964G>A (human)
DNA:repeat:exon, 5' utr:g.-3041(GT)15-16 (human)
RGD PMID:12900808 PMID:15687724 PMID:19011907 RGD:7244138, RGD:7244146, RGD:7244144 NCBI chr12:57,095,408...57,111,362
Ensembl chr12:57,095,408...57,132,139
JBrowse link
lupus nephritis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AGER advanced glycosylation end-product specific receptor IAGP DNA:polymorphisms:promoter, intron:g.-429T>C rs1800625, g.-374T>A rs1800624, g.2184A>G rs3134940 (human) RGD PMID:22513366 RGD:6767309 NCBI chr 6:32,180,969...32,184,253
Ensembl chr 6:32,180,968...32,184,322
JBrowse link
G APOC3 apolipoprotein C3 IEP protein:increased expression:serum RGD PMID:17957542 RGD:7207211 NCBI chr11:116,829,907...116,833,072
Ensembl chr11:116,829,706...116,833,072
JBrowse link
G C3 complement C3 IEP
EXP
protein:decreased expression:serum
CTD Direct Evidence: marker/mechanism
CTD
RGD
PMID:31182691 PMID:21888025 RGD:7175544 NCBI chr19:6,677,704...6,720,650
Ensembl chr19:6,677,704...6,730,562
JBrowse link
G CCL2 C-C motif chemokine ligand 2 severity
susceptibility
IEP
IAGP
protein:increased expression:urine (human)
DNA:snp:promoter:g.-2518A>G (human)
RGD PMID:8558841 PMID:15188361 RGD:8549732, RGD:11528534 NCBI chr17:34,255,285...34,257,203
Ensembl chr17:34,255,274...34,257,208
JBrowse link
G CCL3 C-C motif chemokine ligand 3 ISO RGD PMID:18187931 RGD:7241814 NCBI chr17:36,088,256...36,090,143
Ensembl chr17:36,088,256...36,090,169
JBrowse link
G CCR1 C-C motif chemokine receptor 1 disease_progression ISO RGD PMID:15153561 RGD:5688164 NCBI chr 3:46,201,711...46,208,313
Ensembl chr 3:46,201,711...46,208,313
JBrowse link
G CD40 CD40 molecule treatment ISO RGD PMID:23799000 PMID:18566369 PMID:19265127 RGD:7248418, RGD:7248429, RGD:7248425 NCBI chr20:46,118,314...46,129,858
Ensembl chr20:46,118,271...46,129,863
JBrowse link
G CD40LG CD40 ligand treatment IEP
ISO
IMP
IDA
protein:increased expression:serum RGD PMID:20726330 PMID:11751940 PMID:12632425 PMID:13130474 PMID:15693003 RGD:7248426, RGD:7248714, RGD:7248710, RGD:7248600, RGD:7248439 NCBI chr  X:136,648,158...136,660,390
Ensembl chr  X:136,648,158...136,660,390
JBrowse link
G CFB complement factor B ISO
IEP
RGD PMID:10623824 PMID:3183062 PMID:21893562 RGD:7242736, RGD:7242763, RGD:7242755 NCBI chr 6:31,946,095...31,952,084
Ensembl chr 6:31,945,650...31,952,086
JBrowse link
G CFH complement factor H IAGP RGD PMID:22171659 RGD:5684551 NCBI chr 1:196,652,043...196,747,504
Ensembl chr 1:196,651,754...196,752,476
JBrowse link
G CLU clusterin ISO mRNA:increased expression: epithelial cell of renal tubule RGD PMID:9546356 RGD:8890679 NCBI chr 8:27,596,917...27,614,700
Ensembl chr 8:27,596,917...27,614,700
JBrowse link
G COL1A1 collagen type I alpha 1 chain IEP
ISO
associated with Graft vs Host Disease
mRNA, protein:increased expression:kidney cortex
RGD PMID:21354048 PMID:7700025 PMID:7723234 RGD:5688301, RGD:5688333, RGD:5688332 NCBI chr17:50,184,101...50,201,631
Ensembl chr17:50,184,101...50,201,632
JBrowse link
G CRP C-reactive protein no_association IDA
IAGP
DNA:SNP RGD PMID:18852001 PMID:17596285 PMID:20039408 PMID:15692982 RGD:6907400, RGD:5508454, RGD:6909146, RGD:6909145 NCBI chr 1:159,712,289...159,714,589
Ensembl chr 1:159,712,289...159,714,589
JBrowse link
G CSF1 colony stimulating factor 1 ISO
IEP
RGD PMID:21885670 PMID:17659436 RGD:7257567, RGD:7257589 NCBI chr 1:109,910,506...109,930,992
Ensembl chr 1:109,910,242...109,930,992
JBrowse link
G CTLA4 cytotoxic T-lymphocyte associated protein 4 IDA RGD PMID:15146424 RGD:7204726 NCBI chr 2:203,867,771...203,873,965
Ensembl chr 2:203,853,888...203,873,965
JBrowse link
G EGF epidermal growth factor IEP RGD PMID:21354048 RGD:5688301 NCBI chr 4:109,912,883...110,013,766
Ensembl chr 4:109,912,883...110,013,766
JBrowse link
G FAS Fas cell surface death receptor EXP CTD Direct Evidence: marker/mechanism CTD PMID:33632240 PMID:38555047 NCBI chr10:88,964,050...89,017,059
Ensembl chr10:88,953,813...89,029,605
JBrowse link
G FCGR2A Fc gamma receptor IIa IAGP DNA:missense mutation:cds:p.H131R (human)
ClinVar Annotator: match by term: Lupus nephritis, susceptibility to
ClinVar
RGD
PMID:8636449 PMID:9843982 PMID:10675363 PMID:15367919 PMID:19915573 More... RGD:5147975 NCBI chr 1:161,505,457...161,524,048
Ensembl chr 1:161,505,430...161,524,013
JBrowse link
G FCGR2B Fc gamma receptor IIb ISO RGD PMID:15681388 RGD:7240529 NCBI chr 1:161,647,243...161,678,654
Ensembl chr 1:161,663,143...161,678,654
JBrowse link
G FCGR3A Fc gamma receptor IIIa susceptibility IAGP DNA:SNP:cds:p.V158F (human) RGD PMID:17596285 RGD:5508454 NCBI chr 1:161,541,759...161,550,737
Ensembl chr 1:161,541,759...161,550,968
JBrowse link
G FCGR3B Fc gamma receptor IIIb EXP CTD Direct Evidence: marker/mechanism CTD PMID:16482158 NCBI chr 1:161,623,196...161,631,963
Ensembl chr 1:161,623,196...161,631,963
JBrowse link
G HLA-DQA1 major histocompatibility complex, class II, DQ alpha 1 susceptibility IAGP DNA:polymorphisms:cds:HLA-DQA1*0101 (human)
DNA:polymorphisms:cds:HLA-DQA1*0102 (human)
RGD PMID:12651073 PMID:12651073 RGD:40902999, RGD:40902999 NCBI chr 6:32,637,406...32,655,272
Ensembl chr 6:32,628,179...32,647,062
JBrowse link
G HLA-DRB1 major histocompatibility complex, class II, DR beta 1 susceptibility IAGP DNA:polymorphisms:cds:HLA-DRB1*1501 (human) RGD PMID:12651073 RGD:40902999 NCBI chr 6:32,578,775...32,589,848
Ensembl chr 6:32,577,902...32,589,848
JBrowse link
G IFNG interferon gamma IEP
EXP
IDA
protein:increased expression:serum,urine
CTD Direct Evidence: marker/mechanism
protein:increased processing:kidney
CTD
RGD
PMID:31182691 PMID:22764573 PMID:29925830 RGD:6893369, RGD:14974252 NCBI chr12:68,154,768...68,159,740
Ensembl chr12:68,154,768...68,159,740
JBrowse link
G IL17A interleukin 17A treatment ISO RGD PMID:25129462 RGD:9244623 NCBI chr 6:52,186,375...52,190,638
Ensembl chr 6:52,186,375...52,190,638
JBrowse link
G IL18 interleukin 18 ISO RGD PMID:20980973 RGD:6893449 NCBI chr11:112,143,260...112,164,094
Ensembl chr11:112,143,251...112,164,096
JBrowse link
G IL1B interleukin 1 beta ISO mRNA:increased expression:renal glomerulus (mouse) RGD PMID:21641991 PMID:20410215 RGD:7175315, RGD:7175344 NCBI chr 2:112,829,751...112,836,779
Ensembl chr 2:112,829,751...112,836,816
JBrowse link
G IL1RN interleukin 1 receptor antagonist resistance IEP associated with Lupus Erythematosus, Systemic; protein:increased expression:serum (human) RGD PMID:20538031 RGD:6907068 NCBI chr 2:113,099,360...113,134,014
Ensembl chr 2:113,099,315...113,134,016
JBrowse link
G ITGAM integrin subunit alpha M IAGP RGD PMID:21719445 RGD:5147916 NCBI chr16:31,259,975...31,332,877
Ensembl chr16:31,259,967...31,332,892
JBrowse link
G JAK1 Janus kinase 1 EXP CTD Direct Evidence: marker/mechanism CTD PMID:31182691 NCBI chr 1:64,833,229...65,067,746
Ensembl chr 1:64,833,223...65,067,754
JBrowse link
G KLKB1 kallikrein B1 susceptibility IAGP DNA:SNPs:promoter: RGD PMID:19307730 RGD:7327150 NCBI chr 4:186,210,853...186,258,471
Ensembl chr 4:186,226,438...186,258,471
JBrowse link
G MBL2 mannose binding lectin 2 disease_progression IAGP DNA:polymorphism:exon: RGD PMID:24850777 RGD:12910847 NCBI chr10:52,765,380...52,772,784
Ensembl chr10:52,765,380...52,772,784
JBrowse link
G MIR125A microRNA 125a ISO RNA:decreased expression:kidney RGD PMID:30972208 RGD:26884458 NCBI chr19:51,693,254...51,693,339
Ensembl chr19:51,693,254...51,693,339
JBrowse link
G MMP2 matrix metallopeptidase 2 EXP CTD Direct Evidence: marker/mechanism CTD PMID:22479529 NCBI chr16:55,478,830...55,506,691
Ensembl chr16:55,389,700...55,506,691
JBrowse link
G MMP9 matrix metallopeptidase 9 EXP CTD Direct Evidence: marker/mechanism CTD PMID:22479529 NCBI chr20:46,008,908...46,016,561
Ensembl chr20:46,008,908...46,016,561
JBrowse link
G MPO myeloperoxidase susceptibility IAGP DNA:polymorphism: :−463G > A (human) RGD PMID:17896805 RGD:7174701 NCBI chr17:58,269,855...58,280,935
Ensembl chr17:58,269,855...58,280,935
JBrowse link
G MTOR mechanistic target of rapamycin kinase ISO RGD PMID:17283580 RGD:7245502 NCBI chr 1:11,106,535...11,262,551
Ensembl chr 1:11,106,535...11,262,556
JBrowse link
G MUC20 mucin 20, cell surface associated ISO RGD PMID:14565953 RGD:7364790 NCBI chr 3:195,720,978...195,733,551
Ensembl chr 3:195,720,884...195,741,123
JBrowse link
G NR3C1 nuclear receptor subfamily 3 group C member 1 ISO
IEP
RGD PMID:21509671 PMID:17880936 RGD:7174713, RGD:7174734 NCBI chr 5:143,277,931...143,435,512
Ensembl chr 5:143,277,931...143,435,512
JBrowse link
G OTUB1 OTU deubiquitinase, ubiquitin aldehyde binding 1 IEP protein:increased expression:kidney RGD PMID:22279542 RGD:7175260 NCBI chr11:63,986,438...63,998,412
Ensembl chr11:63,985,853...64,001,811
JBrowse link
G PDCD1 programmed cell death 1 onset IAGP
ISO
DNA:polymorphism: :
DNA:polymorphism:intron:6867 C>T (human)
RGD PMID:15934088 PMID:21041733 PMID:15352422 RGD:7248675, RGD:7248678, RGD:7248676 NCBI chr 2:241,849,884...241,858,894
Ensembl chr 2:241,849,884...241,858,894
JBrowse link
G SELL selectin L ISO RGD PMID:20512127 RGD:7175284 NCBI chr 1:169,690,667...169,711,620
Ensembl chr 1:169,690,665...169,711,702
JBrowse link
G SERPING1 serpin family G member 1 EXP CTD Direct Evidence: marker/mechanism CTD PMID:4014294 NCBI chr11:57,597,685...57,614,848
Ensembl chr11:57,597,387...57,619,171
JBrowse link
G SNRPE small nuclear ribonucleoprotein polypeptide E treatment IDA mouse model RGD PMID:15494537 RGD:10760401 NCBI chr 1:203,861,599...203,871,152
Ensembl chr 1:203,861,599...203,871,152
JBrowse link
G STAT1 signal transducer and activator of transcription 1 EXP CTD Direct Evidence: marker/mechanism CTD PMID:31182691 NCBI chr 2:190,969,149...191,014,171
Ensembl chr 2:190,908,460...191,020,960
JBrowse link
G STAT4 signal transducer and activator of transcription 4 ISO RGD PMID:20980973 RGD:6893449 NCBI chr 2:191,029,576...191,151,596
Ensembl chr 2:191,029,576...191,178,435
JBrowse link
G STAT6 signal transducer and activator of transcription 6 disease_progression ISO RGD PMID:12874250 RGD:7244140 NCBI chr12:57,095,408...57,111,362
Ensembl chr12:57,095,408...57,132,139
JBrowse link
G TLR7 toll like receptor 7 ISO RGD PMID:19944565 RGD:7246905 NCBI chr  X:12,867,072...12,890,361
Ensembl chr  X:12,867,072...12,890,361
JBrowse link
G TLR9 toll like receptor 9 severity
treatment
no_association
ISO
IEP
IAGP
mRNA, protein:increased expression:kidney (mouse)
associated with Graft vs Host Disease
protein:increased expression:renal glomerulus (human)
associated with Lupus Erythematosus, Systemic; DNA:snps:promoter, intron:g.-1486T>C, g.+1174A>G (rs187084, rs352139) (human, North Indian)
DNA:snps:intron, exon:g.+1174G>A, g.+1635C>T (rs352139, rs352140) (human, Chinese)
RGD PMID:23467932 PMID:17469139 PMID:21127878 PMID:19578108 PMID:22787315 More... RGD:7245987, RGD:7246911, RGD:7246897, RGD:7246896, RGD:7245989, RGD:7246884 NCBI chr 3:52,221,080...52,225,645
Ensembl chr 3:52,221,080...52,225,645
JBrowse link
G TNF tumor necrosis factor IEP protein:increased expression:glomerular mesangial cell RGD PMID:7750940 RGD:7394786 NCBI chr 6:31,575,565...31,578,336
Ensembl chr 6:31,575,565...31,578,336
JBrowse link
G TNFRSF11B TNF receptor superfamily member 11b IEP associated with Lupus Erythematosus, Systemic;protein:increased expression:urine RGD PMID:21691937 RGD:7205483 NCBI chr 8:118,923,557...118,951,885
Ensembl chr 8:118,923,557...118,951,885
JBrowse link
G TNFRSF1A TNF receptor superfamily member 1A severity ISO
IEP
RGD PMID:19201910 PMID:10906156 RGD:7245569, RGD:7245572 NCBI chr12:6,328,771...6,342,076
Ensembl chr12:6,328,757...6,342,114
JBrowse link
G TNFRSF1B TNF receptor superfamily member 1B treatment IDA
ISO
RGD PMID:22846145 PMID:22674120 RGD:7245541, RGD:7245544 NCBI chr 1:12,166,991...12,209,220
Ensembl chr 1:12,166,991...12,209,228
JBrowse link
G VCAM1 vascular cell adhesion molecule 1 severity IEP protein:increased expression:urine RGD PMID:22788914 RGD:7241032 NCBI chr 1:100,719,742...100,739,045
Ensembl chr 1:100,719,742...100,739,045
JBrowse link
membranoproliferative glomerulonephritis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ALB albumin EXP CTD Direct Evidence: marker/mechanism CTD PMID:1556257 NCBI chr 4:73,404,287...73,421,482
Ensembl chr 4:73,397,114...73,421,482
JBrowse link
G ANGPT2 angiopoietin 2 ISO protein:increased expression:glomerulus (rat) RGD PMID:18272601 RGD:2314193 NCBI chr 8:6,499,632...6,563,245
Ensembl chr 8:6,499,632...6,563,409
JBrowse link
G C1QA complement C1q A chain EXP CTD Direct Evidence: marker/mechanism CTD PMID:8840296 NCBI chr 1:22,636,463...22,639,678
Ensembl chr 1:22,635,077...22,639,678
JBrowse link
G C3 complement C3 IAGP ClinVar Annotator: match by term: Mesangiocapillary glomerulonephritis ClinVar PMID:32581362 NCBI chr19:6,677,704...6,720,650
Ensembl chr19:6,677,704...6,730,562
JBrowse link
G CCL2 C-C motif chemokine ligand 2 treatment ISO RGD PMID:10411686 RGD:8549648 NCBI chr17:34,255,285...34,257,203
Ensembl chr17:34,255,274...34,257,208
JBrowse link
G CCN2 cellular communication network factor 2 ISO protein:increased expression:kidney, glomerulus (rat) RGD PMID:15172885 RGD:1601118 NCBI chr 6:131,948,176...131,951,372
Ensembl chr 6:131,948,176...131,951,372
JBrowse link
G CCR6 C-C motif chemokine receptor 6 treatment ISO RGD PMID:23192593 RGD:7483632 NCBI chr 6:167,111,795...167,139,141
Ensembl chr 6:167,111,807...167,139,141
JBrowse link
G CDK2 cyclin dependent kinase 2 ISO RGD PMID:17893107 RGD:2293563 NCBI chr12:55,966,830...55,972,789
Ensembl chr12:55,966,781...55,972,789
JBrowse link
G CDKN1B cyclin dependent kinase inhibitor 1B ISO protein:decreased expression:kidney RGD PMID:16787597 RGD:2293620 NCBI chr12:12,717,368...12,722,369
Ensembl chr12:12,685,498...12,722,369
JBrowse link
G CFB complement factor B ISO
IDA
RGD PMID:12091909 PMID:2329415 RGD:734771, RGD:7242760 NCBI chr 6:31,946,095...31,952,084
Ensembl chr 6:31,945,650...31,952,086
JBrowse link
G CFH complement factor H EXP
IAGP
ISS
CTD Direct Evidence: marker/mechanism
ClinVar Annotator: match by term: Non-immunoglobulin-mediated membranoproliferative glomerulonephritis
OMIM:305800
ClinVar Annotator: match by term: Mesangiocapillary glomerulonephritis
ClinVar Annotator: match by term: Mesangiocapillary glomerulonephritis, type II
CTD
ClinVar
MouseDO
PMID:14978182 PMID:21415311 PMID:22223606 PMID:22403278 PMID:25741868 More... NCBI chr 1:196,652,043...196,747,504
Ensembl chr 1:196,651,754...196,752,476
JBrowse link
G CFHR2 complement factor H related 2 IAGP ClinVar Annotator: match by term: Non-immunoglobulin-mediated membranoproliferative glomerulonephritis ClinVar PMID:25741868 PMID:28492532 PMID:29093712 PMID:34260947 NCBI chr 1:196,943,738...196,959,622
Ensembl chr 1:196,943,738...196,959,622
JBrowse link
G CFHR5 complement factor H related 5 IAGP ClinVar Annotator: match by term: Mesangiocapillary glomerulonephritis, type II ClinVar PMID:25741868 PMID:28492532 NCBI chr 1:196,975,034...197,009,678
Ensembl chr 1:196,975,010...197,009,678
JBrowse link
G CFI complement factor I ISO RGD PMID:18202746 RGD:6906892 NCBI chr 4:109,730,982...109,801,999
Ensembl chr 4:109,731,008...109,802,150
JBrowse link
G CXCR1 C-X-C motif chemokine receptor 1 ISO RGD PMID:23336303 RGD:7207859 NCBI chr 2:218,162,841...218,166,962
Ensembl chr 2:218,162,841...218,166,962
JBrowse link
G EDN1 endothelin 1 treatment ISO mRNA, protein:increased expression:glomerulus (rat) RGD PMID:8569091 PMID:11601021 RGD:4144848, RGD:8662296 NCBI chr 6:12,230,516...12,297,194
Ensembl chr 6:12,290,361...12,297,194
JBrowse link
G EP300 E1A binding protein p300 treatment ISO RGD PMID:24344329 RGD:9588308 NCBI chr22:41,092,592...41,180,077
Ensembl chr22:41,092,510...41,180,077
JBrowse link
G F5 coagulation factor V ISO RGD PMID:15172885 RGD:1601118 NCBI chr 1:169,511,951...169,586,481
Ensembl chr 1:169,511,951...169,586,588
JBrowse link
G FN1 fibronectin 1 ISO RGD PMID:10082755 RGD:7206847 NCBI chr 2:215,360,865...215,436,068
Ensembl chr 2:215,360,440...215,436,073
JBrowse link
G IL1B interleukin 1 beta ISO RGD PMID:21871881 RGD:7175308 NCBI chr 2:112,829,751...112,836,779
Ensembl chr 2:112,829,751...112,836,816
JBrowse link
G KCNT2 potassium sodium-activated channel subfamily T member 2 IAGP ClinVar Annotator: match by term: Mesangiocapillary glomerulonephritis ClinVar PMID:32581362 NCBI chr 1:196,225,779...196,608,440
Ensembl chr 1:196,225,779...196,609,225
JBrowse link
G MYOC myocilin ISO protein:increased expression:renal glomerulus (rat) RGD PMID:15610237 RGD:7401266 NCBI chr 1:171,635,417...171,652,688
Ensembl chr 1:171,635,417...171,652,688
JBrowse link
G PFN1 profilin 1 ISO RGD PMID:8651905 RGD:729497 NCBI chr17:4,945,652...4,948,530
Ensembl chr17:4,945,652...4,949,061
JBrowse link
G PON1 paraoxonase 1 EXP CTD Direct Evidence: marker/mechanism CTD PMID:16175651 NCBI chr 7:95,297,676...95,324,532
Ensembl chr 7:95,297,676...95,324,532
JBrowse link
G PRF1 perforin 1 ISO mRNA:increased expression:glomerulus RGD PMID:10886554 RGD:1599935 NCBI chr10:70,597,348...70,602,741
Ensembl chr10:70,597,348...70,602,759
JBrowse link
G SPARC secreted protein acidic and cysteine rich ISO mRNA:increased expression:glomerulus RGD PMID:8644857 RGD:2300070 NCBI chr 5:151,661,096...151,686,915
Ensembl chr 5:151,661,096...151,686,975
JBrowse link
G TGFBR2 transforming growth factor beta receptor 2 ISO RGD PMID:11703592 RGD:1601601 NCBI chr 3:30,606,356...30,694,142
Ensembl chr 3:30,606,478...30,694,249
JBrowse link
G TLR1 toll like receptor 1 ISO mRNA:increased expression:renal glomerulus (mouse) RGD PMID:18256364 RGD:7246909 NCBI chr 4:38,787,569...38,805,644
Ensembl chr 4:38,787,555...38,856,817
JBrowse link
G TLR2 toll like receptor 2 ISO mRNA:increased expression:renal glomerulus (mouse) RGD PMID:18256364 RGD:7246909 NCBI chr 4:153,684,280...153,710,637
Ensembl chr 4:153,684,050...153,706,260
JBrowse link
G TLR4 toll like receptor 4 ISO mRNA:increased expression:renal glomerulus (mouse) RGD PMID:18256364 RGD:7246909 NCBI chr 9:117,704,403...117,724,735
Ensembl chr 9:117,704,175...117,724,735
JBrowse link
G TLR5 toll like receptor 5 ISO mRNA:increased expression:renal glomerulus (mouse) RGD PMID:18256364 RGD:7246909 NCBI chr 1:223,109,404...223,143,248
Ensembl chr 1:223,109,404...223,143,292
JBrowse link
G TLR6 toll like receptor 6 ISO mRNA:increased expression:renal glomerulus (mouse) RGD PMID:18256364 RGD:7246909 NCBI chr 4:38,822,897...38,868,390
Ensembl chr 4:38,822,897...38,856,817
JBrowse link
G TLR7 toll like receptor 7 ISO mRNA:increased expression:renal glomerulus (mouse) RGD PMID:18256364 RGD:7246909 NCBI chr  X:12,867,072...12,890,361
Ensembl chr  X:12,867,072...12,890,361
JBrowse link
G TLR8 toll like receptor 8 ISO mRNA:increased expression:renal glomerulus (mouse) RGD PMID:18256364 RGD:7246909 NCBI chr  X:12,906,620...12,923,169
Ensembl chr  X:12,906,620...12,923,169
JBrowse link
G TLR9 toll like receptor 9 ISO mRNA:increased expression:renal glomerulus (mouse) RGD PMID:18256364 RGD:7246909 NCBI chr 3:52,221,080...52,225,645
Ensembl chr 3:52,221,080...52,225,645
JBrowse link
G TSLP thymic stromal lymphopoietin EXP
ISS
CTD Direct Evidence: marker/mechanism
OMIM:305800
CTD
MouseDO
PMID:17686814 NCBI chr 5:111,070,062...111,078,026
Ensembl chr 5:111,070,062...111,078,026
JBrowse link
membranous glomerulonephritis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G A2M alpha-2-macroglobulin ISO protein:increased expression:serum RGD PMID:9453001 RGD:10046046 NCBI chr12:9,067,708...9,116,229
Ensembl chr12:9,067,664...9,116,229
JBrowse link
G ABCA1 ATP binding cassette subfamily A member 1 ISO RGD PMID:12507911 RGD:1598547 NCBI chr 9:104,781,006...104,928,155
Ensembl chr 9:104,781,006...104,928,155
JBrowse link
G ALB albumin EXP CTD Direct Evidence: marker/mechanism CTD PMID:1342223 PMID:9794552 PMID:11938814 PMID:12776520 PMID:15385633 More... NCBI chr 4:73,404,287...73,421,482
Ensembl chr 4:73,397,114...73,421,482
JBrowse link
G APOA1 apolipoprotein A1 EXP CTD Direct Evidence: marker/mechanism CTD PMID:7900854 NCBI chr11:116,835,751...116,837,622
Ensembl chr11:116,835,751...116,837,622
JBrowse link
G APOE apolipoprotein E ISO protein:increased expression:serum (rat) RGD PMID:22785171 RGD:6903854 NCBI chr19:44,905,796...44,909,393
Ensembl chr19:44,905,791...44,909,393
JBrowse link
G C3 complement C3 ISO
EXP
CTD Direct Evidence: marker/mechanism CTD
RGD
PMID:25954969 PMID:10729746 RGD:5129563 NCBI chr19:6,677,704...6,720,650
Ensembl chr19:6,677,704...6,730,562
JBrowse link
G C7 complement C7 ISO RGD PMID:6241952 RGD:1599528 NCBI chr 5:40,909,497...40,984,643
Ensembl chr 5:40,909,492...41,020,216
JBrowse link
G CD40 CD40 molecule treatment ISO RGD PMID:23223173 PMID:23223173 RGD:8547786, RGD:8547786 NCBI chr20:46,118,314...46,129,858
Ensembl chr20:46,118,271...46,129,863
JBrowse link
G CD40LG CD40 ligand treatment ISO associated with Lupus Erythematosus, Systemic RGD PMID:17911451 PMID:7564113 RGD:7248430, RGD:7248720 NCBI chr  X:136,648,158...136,660,390
Ensembl chr  X:136,648,158...136,660,390
JBrowse link
G CDKN1B cyclin dependent kinase inhibitor 1B treatment ISO RGD PMID:24583340 RGD:10045363 NCBI chr12:12,717,368...12,722,369
Ensembl chr12:12,685,498...12,722,369
JBrowse link
G CFB complement factor B susceptibility IAGP RGD PMID:3272818 RGD:7242764 NCBI chr 6:31,946,095...31,952,084
Ensembl chr 6:31,945,650...31,952,086
JBrowse link
G CFH complement factor H ISO mRNA, protein:increased expression:glomerulus RGD PMID:12911541 RGD:1599888 NCBI chr 1:196,652,043...196,747,504
Ensembl chr 1:196,651,754...196,752,476
JBrowse link
G GAA alpha glucosidase EXP CTD Direct Evidence: marker/mechanism CTD PMID:15466083 NCBI chr17:80,101,581...80,119,881
Ensembl chr17:80,101,533...80,119,881
JBrowse link
G HLA-DQA1 major histocompatibility complex, class II, DQ alpha 1 IAGP
EXP
DNA:SNP: :rs2187668 (human)
CTD Direct Evidence: marker/mechanism
CTD
RGD
PMID:11436868 PMID:21323541 RGD:5147785 NCBI chr 6:32,637,406...32,655,272
Ensembl chr 6:32,628,179...32,647,062
JBrowse link
G HLA-DRB1 major histocompatibility complex, class II, DR beta 1 EXP CTD Direct Evidence: marker/mechanism CTD PMID:11436868 NCBI chr 6:32,578,775...32,589,848
Ensembl chr 6:32,577,902...32,589,848
JBrowse link
G IL1B interleukin 1 beta ISO RGD PMID:20588061 RGD:7175342 NCBI chr 2:112,829,751...112,836,779
Ensembl chr 2:112,829,751...112,836,816
JBrowse link
G LRP2 LDL receptor related protein 2 ISO mRNA:decreased expression:glomerulus RGD PMID:10919857 RGD:1641827 NCBI chr 2:169,127,109...169,362,534
Ensembl chr 2:169,127,109...169,362,534
JBrowse link
G LRPAP1 LDL receptor related protein associated protein 1 ISO mRNA, protein:increased expression:glomerulus, epithelial cell RGD PMID:7778686 PMID:7723231 RGD:1641937, RGD:1641936 NCBI chr 4:3,503,612...3,532,422
Ensembl chr 4:3,503,612...3,532,446
JBrowse link
G MAP3K5 mitogen-activated protein kinase kinase kinase 5 ISO protein:increased activity,protein:renal glomerulus: RGD PMID:18178252 RGD:10412641 NCBI chr 6:136,557,046...136,793,091
Ensembl chr 6:136,557,046...136,793,097
JBrowse link
G MME membrane metalloendopeptidase IAGP antenatal membranous glomerulonephritis
ClinVar Annotator: match by term: Congenital membranous nephropathy due to fetomaternal anti-neutral endopeptidase alloimmunization
ClinVar
RGD
PMID:15464186 PMID:24033266 PMID:25565308 PMID:25741868 PMID:26991897 More... RGD:1600817 NCBI chr 3:155,024,202...155,183,729
Ensembl chr 3:155,024,124...155,183,704
JBrowse link
G MMP9 matrix metallopeptidase 9 ISO RGD PMID:8613533 RGD:8547919 NCBI chr20:46,008,908...46,016,561
Ensembl chr20:46,008,908...46,016,561
JBrowse link
G NPHS1 NPHS1 adhesion molecule, nephrin ISO RGD PMID:15882266 RGD:1598706 NCBI chr19:35,862,915...35,869,357
Ensembl chr19:35,825,964...35,869,287
JBrowse link
G NPHS2 NPHS2 stomatin family member, podocin ISO RGD PMID:15882266 RGD:1598706 NCBI chr 1:179,550,539...179,575,948
Ensembl chr 1:179,550,539...179,575,952
JBrowse link
G NQO1 NAD(P)H quinone dehydrogenase 1 treatment ISO RGD PMID:28711658 RGD:13439719 NCBI chr16:69,709,401...69,726,560
Ensembl chr16:69,706,996...69,726,668
JBrowse link
G PTGER3 prostaglandin E receptor 3 ISO mRNA:increased expression:renal cortex (rat) RGD PMID:14636300 RGD:10043359 NCBI chr 1:70,852,358...71,047,816
Ensembl chr 1:70,852,353...71,047,816
JBrowse link
G PTPRU protein tyrosine phosphatase receptor type U ISO mRNA, protein:decreased expression:glomerulus RGD PMID:17457373 RGD:1642654 NCBI chr 1:29,236,522...29,326,800
Ensembl chr 1:29,236,516...29,326,813