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Pathways

RGD DISEASE ONTOLOGY - ANNOTATIONS

RGD uses the Human Disease Ontology (DO, https://disease-ontology.org/) for disease curation across species. RGD automatically downloads each new release of the ontology on a monthly basis. Some additional terms which are required for RGD's curation purposes but are not currently covered in the official version of DO have been added. As corresponding terms are added to DO, these custom terms are retired and the DO terms substituted in existing annotations and subsequently used for curation.

Term:pancreas disease
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Accession:DOID:26 term browser browse the term
Definition:An endocrine system disease that is located_in the pancreas. (DO)
Synonyms:exact_synonym: pancreatic disease;   pancreatic diseases
 primary_id: MESH:D010182
 xref: EFO:0009605;   ICD10CM:K86.8;   ICD10CM:K86.89;   ICD9CM:577.8
For additional species annotation, visit the Alliance of Genome Resources.



show annotations for term's descendants           Sort by:
pancreas disease term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ager advanced glycosylation end product-specific receptor ISO CTD Direct Evidence: marker/mechanism CTD PMID:24036142 NCBI chr20:4,152,758...4,155,956
Ensembl chr20:4,151,965...4,155,685
JBrowse link
G Alb albumin ISO CTD Direct Evidence: marker/mechanism CTD PMID:17169978 NCBI chr14:17,891,564...17,907,043
Ensembl chr14:17,891,582...17,911,865
JBrowse link
G Gip gastric inhibitory polypeptide IEP protein:increased expression:plasma (rat) RGD PMID:3892654 RGD:2312553 NCBI chr10:81,465,070...81,473,216
Ensembl chr10:81,465,062...81,473,216
JBrowse link
G Hmox1 heme oxygenase 1 ISO CTD Direct Evidence: therapeutic CTD PMID:18784349 NCBI chr19:13,452,365...13,479,823
Ensembl chr19:13,472,884...13,479,818
JBrowse link
G Hnf1b HNF1 homeobox B ISO associated with Diabetes Mellitus, Non-Insulin-Dependent; DNA:missense, nonsense mutations:cds:multiple (human) RGD PMID:15068978 RGD:2312751 NCBI chr10:69,233,377...69,287,360
Ensembl chr10:69,233,131...69,287,361
JBrowse link
G Il6 interleukin 6 ISO insulitis associated with Diabetes Mellitus, Insulin-Dependent; protein:increased expression:extracellular space (mouse) RGD PMID:18772604 RGD:2307287 NCBI chr 4:5,889,999...5,894,575
Ensembl chr 4:5,889,999...5,894,610
JBrowse link
G Lepr leptin receptor ISO CTD Direct Evidence: marker/mechanism CTD PMID:3519326 NCBI chr 5:121,409,735...121,593,201
Ensembl chr 5:121,474,099...121,591,215
JBrowse link
G Msln mesothelin ISO protein:increased expression:serum RGD PMID:19843662 RGD:2326052 NCBI chr10:15,276,489...15,285,921
Ensembl chr10:15,275,659...15,282,153
JBrowse link
G Pomc proopiomelanocortin ISO CTD Direct Evidence: marker/mechanism CTD PMID:6143199 NCBI chr 6:32,659,137...32,665,175
Ensembl chr 6:32,659,346...32,665,173
JBrowse link
G Spp1 secreted phosphoprotein 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:20495387 NCBI chr14:5,613,569...5,620,695
Ensembl chr14:5,613,576...5,619,820
JBrowse link
abdominal obesity-metabolic syndrome term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ctf1 cardiotrophin 1 ISS MouseDO NCBI chr 1:182,328,035...182,336,346
Ensembl chr 1:191,757,477...191,776,395
JBrowse link
G Gucy2c guanylate cyclase 2C ISS MouseDO NCBI chr 4:171,299,715...171,380,296
Ensembl chr 4:171,299,740...171,380,296
JBrowse link
G Lep leptin ISS MouseDO NCBI chr 4:58,626,529...58,640,663
Ensembl chr 4:58,626,523...58,640,661
JBrowse link
G Neil1 nei-like DNA glycosylase 1 ISS MouseDO NCBI chr 8:66,446,106...66,452,844
Ensembl chr 8:66,445,953...66,452,378
JBrowse link
G Ppara peroxisome proliferator activated receptor alpha ISO CTD Direct Evidence: marker/mechanism CTD PMID:15309680 NCBI chr 7:118,712,261...118,780,723
Ensembl chr 7:118,712,412...118,780,714
JBrowse link
G Pparg peroxisome proliferator-activated receptor gamma ISS MouseDO NCBI chr 4:150,095,743...150,221,104
Ensembl chr 4:150,095,787...150,221,104
JBrowse link
G Ppargc1a PPARG coactivator 1 alpha IEP mRNA:increased expression:gastrocnemius muscle (rat) RGD PMID:23320128 RGD:7241841 NCBI chr14:63,073,505...63,729,215
Ensembl chr14:63,273,189...63,729,213
JBrowse link
G Prkci protein kinase C, iota ISS MouseDO NCBI chr 2:114,250,398...114,310,784
Ensembl chr 2:114,250,398...114,310,784
JBrowse link
G Sirt3 sirtuin 3 ISS MouseDO NCBI chr 1:205,371,703...205,394,145
Ensembl chr 1:205,371,710...205,394,076
JBrowse link
G Slc2a9 solute carrier family 2 member 9 ISS MouseDO NCBI chr14:76,540,649...76,674,277
Ensembl chr14:76,540,571...76,674,277
JBrowse link
abdominal obesity-metabolic syndrome 1 term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp2a2 ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 2 IDA protein:increased oxidation:cardiac muscle cell RGD PMID:23997093 RGD:13782087 NCBI chr12:39,733,519...39,782,942
Ensembl chr12:39,733,458...39,782,934
JBrowse link
G Bax BCL2 associated X, apoptosis regulator treatment IEP RGD PMID:27131981 RGD:13792503 NCBI chr 1:105,076,472...105,081,906
Ensembl chr 1:105,076,473...105,086,429
JBrowse link
G Bcl2 BCL2, apoptosis regulator treatment IEP RGD PMID:27131981 RGD:13792503 NCBI chr13:23,204,464...23,366,900
Ensembl chr13:23,204,464...23,366,900
JBrowse link
G Fadd Fas associated via death domain treatment IEP RGD PMID:27131981 RGD:13792503 NCBI chr 1:209,169,245...209,175,423
Ensembl chr 1:209,169,318...209,174,976
JBrowse link
G Fas Fas cell surface death receptor IEP RGD PMID:30172001 RGD:13792561 NCBI chr 1:241,212,155...241,245,774
Ensembl chr 1:241,205,935...241,246,104
JBrowse link
G Lep leptin ISS OMIM:605552 MouseDO NCBI chr 4:58,626,529...58,640,663
Ensembl chr 4:58,626,523...58,640,661
JBrowse link
G Lpl lipoprotein lipase treatment IDA RGD PMID:26996629 RGD:13794382 NCBI chr16:25,596,205...25,621,928
Ensembl chr16:25,596,211...25,622,107
JBrowse link
G Mttp microsomal triglyceride transfer protein ISO ClinVar Annotator: match by term: Abdominal obesity-metabolic syndrome 1 | ClinVar Annotator: match by term: METABOLIC SYNDROME, PROTECTION AGAINST ClinVar PMID:8533758 PMID:9671739 PMID:16721486 PMID:25741868 PMID:28492532 NCBI chr 2:229,286,501...229,327,650
Ensembl chr 2:229,286,501...229,327,650
JBrowse link
G Tlr2 toll-like receptor 2 susceptibility ISO RGD PMID:19841034 RGD:15090861 NCBI chr 2:171,499,189...171,504,831
Ensembl chr 2:171,497,060...171,520,194
JBrowse link
G Tp53inp1 tumor protein p53 inducible nuclear protein 1 ISS OMIM:605552 MouseDO NCBI chr 5:29,051,267...29,069,486
Ensembl chr 5:29,051,264...29,069,484
JBrowse link
abdominal obesity-metabolic syndrome 3 term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ahdc1 AT hook, DNA binding motif, containing 1 ISO ClinVar Annotator: match by term: Abdominal obesity-metabolic syndrome 3 ClinVar PMID:25741868 PMID:29696776 PMID:33644933 NCBI chr 5:145,228,228...145,294,170
Ensembl chr 5:150,512,037...150,583,144
JBrowse link
G Dyrk1b dual specificity tyrosine phosphorylation regulated kinase 1B ISO ClinVar Annotator: match by term: Abdominal obesity-metabolic syndrome 3 | ClinVar Annotator: match by term: DYRK1B-related condition OMIM
ClinVar
PMID:9536098 PMID:17576681 PMID:24827035 PMID:25741868 PMID:28492532 More... NCBI chr 1:83,479,168...83,497,011
Ensembl chr 1:92,607,303...92,614,744
JBrowse link
abdominal obesity-metabolic syndrome 4 term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cela2a chymotrypsin like elastase 2A ISO ClinVar Annotator: match by term: Abdominal obesity-metabolic syndrome 4 OMIM
ClinVar
PMID:25741868 PMID:31358993 NCBI chr 5:154,126,879...154,136,630
Ensembl chr 5:159,409,899...159,426,208
JBrowse link
Acute Experimental Pancreatitis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp2a2 ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 2 treatment IEP RGD PMID:18416460 RGD:13782074 NCBI chr12:39,733,519...39,782,942
Ensembl chr12:39,733,458...39,782,934
JBrowse link
G Bcl2l1 Bcl2-like 1 IEP protein:increased expression:pancreas, mitochondrion (rat) RGD PMID:19331832 RGD:11353791 NCBI chr 3:161,713,777...161,764,844
Ensembl chr 3:161,745,540...161,764,907
Ensembl chr 1:161,745,540...161,764,907
JBrowse link
G Becn1 beclin 1 treatment ISO RGD PMID:22850625 RGD:11560530 NCBI chr10:86,731,649...86,747,002
Ensembl chr10:86,731,650...86,747,002
JBrowse link
G Cdkn1a cyclin-dependent kinase inhibitor 1A IEP RGD PMID:10451498 RGD:10043817 NCBI chr20:7,150,820...7,161,373
Ensembl chr20:7,153,958...7,164,969
JBrowse link
G Ednra endothelin receptor type A treatment IMP RGD PMID:12799311 RGD:1581841 NCBI chr19:47,137,360...47,207,961
Ensembl chr19:47,137,771...47,201,284
JBrowse link
G Fas Fas cell surface death receptor severity ISO protein:increased expression:Kupffer cell: RGD PMID:15797225 PMID:15797225 RGD:14700708, RGD:14700708 NCBI chr 1:241,212,155...241,245,774
Ensembl chr 1:241,205,935...241,246,104
JBrowse link
G Faslg Fas ligand severity ISO protein:increased expression:Kupffer cell: RGD PMID:15797225 PMID:15797225 RGD:14700708, RGD:14700708 NCBI chr13:76,680,885...76,706,042
Ensembl chr13:76,688,243...76,695,503
JBrowse link
G Gss glutathione synthetase IEP RGD PMID:17897920 RGD:11353819 NCBI chr 3:164,508,005...164,538,343
Ensembl chr 3:164,508,005...164,538,306
JBrowse link
G Hmgb1 high mobility group box 1 treatment IMP RGD PMID:23706497 RGD:10402063 NCBI chr12:11,009,236...11,015,941
Ensembl chr16:39,039,050...39,041,327
Ensembl chr12:39,039,050...39,041,327
JBrowse link
G Hspa5 heat shock protein family A (Hsp70) member 5 IEP protein:increased expression:neutrophil: RGD PMID:26464680 RGD:11354914 NCBI chr 3:38,453,016...38,457,475
Ensembl chr 3:38,453,041...38,458,790
JBrowse link
G Icam1 intercellular adhesion molecule 1 treatment IEP
IMP
RGD PMID:23706497 PMID:10201790 RGD:10402063, RGD:11520782 NCBI chr 8:27,829,688...27,841,618
Ensembl chr 8:27,829,161...27,841,617
JBrowse link
G Il10 interleukin 10 treatment IEP protein:increased expression:serum RGD PMID:19399939 PMID:25323753 RGD:2306925, RGD:11049477 NCBI chr13:45,024,921...45,029,586
Ensembl chr13:45,025,087...45,029,580
JBrowse link
G Il4 interleukin 4 treatment IEP RGD PMID:24876883 RGD:10402805 NCBI chr10:38,272,003...38,277,549
Ensembl chr10:38,272,003...38,277,549
JBrowse link
G Jak1 Janus kinase 1 treatment IEP RGD PMID:21369693 RGD:19165136 NCBI chr 5:120,895,606...121,004,207
Ensembl chr 5:120,896,046...120,996,758
JBrowse link
G Kmo kynurenine 3-monooxygenase disease_progression ISO
IMP
RGD PMID:26752518 PMID:28398044 RGD:11342439, RGD:13703053 NCBI chr13:90,089,340...90,121,108
Ensembl chr13:90,089,463...90,125,151
JBrowse link
G Kras KRAS proto-oncogene, GTPase IEP RGD PMID:8913708 RGD:11062095 NCBI chr 4:179,916,255...179,949,613
Ensembl chr 4:179,919,802...179,949,320
JBrowse link
G Lamp2 lysosomal-associated membrane protein 2 ISO protein:decreased expression:pancreas RGD PMID:22850625 RGD:11560530 NCBI chr  X:122,038,734...122,087,745
Ensembl chr  X:121,922,187...122,087,675
JBrowse link
G Map1lc3a microtubule-associated protein 1 light chain 3 alpha treatment ISO RGD PMID:22850625 RGD:11560530 NCBI chr 3:164,243,204...164,244,850
Ensembl chr 3:164,243,093...164,244,850
JBrowse link
G Mdm2 MDM2 proto-oncogene IEP protein:increased expression:pancreas (rat) RGD PMID:19850968 RGD:2317361 NCBI chr 7:55,176,558...55,201,757
Ensembl chr 7:55,176,560...55,200,791
JBrowse link
G Mir155 microRNA 155 treatment ISO RGD PMID:29937734 PMID:30497068 RGD:21403683, RGD:21408596 NCBI chr11:37,261,114...37,261,178
Ensembl chr11:37,261,114...37,261,178
JBrowse link
G Parp1 poly (ADP-ribose) polymerase 1 ISO RGD PMID:16127429 RGD:11075069 NCBI chr13:94,839,484...94,871,295
Ensembl chr13:94,839,433...94,871,567
JBrowse link
G Proc protein C, inactivator of coagulation factors Va and VIIIa treatment ISO RGD PMID:19680809 RGD:11100040 NCBI chr18:24,038,596...24,049,061
Ensembl chr18:24,038,597...24,048,964
JBrowse link
G Procr protein C receptor treatment IEP
IDA
protein:increased expression:blood RGD PMID:25688263 PMID:24749346 RGD:13515127, RGD:13515128 NCBI chr 3:164,714,727...164,718,994
Ensembl chr 3:164,711,636...164,718,989
JBrowse link
G Ptafr platelet-activating factor receptor treatment IDA RGD PMID:21633536 RGD:9999225 NCBI chr 5:150,049,322...150,079,060
Ensembl chr 5:150,049,460...150,079,408
JBrowse link
G Reg1a regenerating family member 1 alpha severity IEP
IMP
mRNA:increased expression:pancreas (rat) RGD PMID:1985964 PMID:19129610 RGD:729900, RGD:9850139 NCBI chr 4:112,450,466...112,453,130
Ensembl chr 4:112,450,468...112,453,585
JBrowse link
G Reg3b regenerating family member 3 beta IEP protein:increased expression:serum (rat) RGD PMID:11066135 RGD:9831384 NCBI chr 4:112,419,776...112,423,014
Ensembl chr 4:112,419,776...112,423,014
JBrowse link
G Serpinc1 serpin family C member 1 treatment ISO RGD PMID:19546838 RGD:11035262 NCBI chr13:75,790,558...75,804,826
Ensembl chr13:75,790,546...75,817,643
JBrowse link
G Serpinf1 serpin family F member 1 IEP RGD PMID:10360224 RGD:8661651 NCBI chr10:60,748,504...60,760,898
Ensembl chr10:60,748,506...60,760,898
JBrowse link
G Serping1 serpin family G member 1 IEP protein:decreased expression:plasma RGD PMID:10360224 RGD:8661651 NCBI chr 3:90,249,410...90,259,299
Ensembl chr 3:90,249,423...90,258,717
JBrowse link
G Spink1 serine peptidase inhibitor, Kazal type 1 treatment IDA RGD PMID:15765407 RGD:10043090 NCBI chr18:36,121,626...36,133,596
Ensembl chr18:36,076,399...36,133,545
JBrowse link
G Tnf tumor necrosis factor IEP associated with Anemia, Hemolytic RGD PMID:12845374 PMID:15164724 RGD:10449461, RGD:1580295 NCBI chr20:3,626,685...3,629,303
Ensembl chr20:3,626,532...3,629,303
JBrowse link
G Tnfrsf1a TNF receptor superfamily member 1A IEP protein:increased expression:serum RGD PMID:15164724 RGD:1580295 NCBI chr 4:159,837,119...159,849,817
Ensembl chr 4:159,837,032...159,849,816
JBrowse link
G Tnfrsf1b TNF receptor superfamily member 1B IEP protein:increased expression:serum RGD PMID:15164724 RGD:1580295 NCBI chr 5:162,356,250...162,387,411
Ensembl chr 5:162,353,848...162,387,411
JBrowse link
G Vwf von Willebrand factor IEP protein:increased expression:plasma: RGD PMID:17708840 RGD:11079229 NCBI chr 4:160,042,900...160,177,757
Ensembl chr 4:160,047,982...160,177,757
JBrowse link
acute necrotizing pancreatitis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adcyap1 adenylate cyclase activating polypeptide 1 IDA RGD PMID:15702783 RGD:2325308 NCBI chr 9:120,550,236...120,569,096
Ensembl chr 9:120,550,328...120,556,383
JBrowse link
G Arg1 arginase 1 IDA RGD PMID:20697209 RGD:4142795 NCBI chr 1:22,295,093...22,307,720
Ensembl chr 1:22,295,322...22,307,713
JBrowse link
G Becn1 beclin 1 IEP protein:increased expression:pancreas RGD PMID:21926933 RGD:6483068 NCBI chr10:86,731,649...86,747,002
Ensembl chr10:86,731,650...86,747,002
JBrowse link
G Birc5 baculoviral IAP repeat-containing 5 IEP mRNA:increased expression:pancreas RGD PMID:12604914 RGD:2293139 NCBI chr10:103,567,369...103,580,069
Ensembl chr10:103,572,080...103,582,155
JBrowse link
G Btg2 BTG anti-proliferation factor 2 IEP mRNA:increased expression:liver, kidney, pancreas RGD PMID:9712737 RGD:2289078 NCBI chr13:48,083,931...48,087,690
Ensembl chr13:48,083,931...48,087,690
JBrowse link
G C5 complement C5 ISO RGD PMID:11292607 RGD:5130168 NCBI chr 3:38,668,174...38,759,468
Ensembl chr 3:38,668,174...38,759,468
JBrowse link
G C5ar1 complement C5a receptor 1 ISO RGD PMID:11292607 RGD:5130168 NCBI chr 1:86,077,309...86,088,001 JBrowse link
G Calca calcitonin-related polypeptide alpha resistance IDA RGD PMID:19684430 RGD:5684345 NCBI chr 1:178,312,636...178,317,588
Ensembl chr 1:178,312,638...178,317,529
JBrowse link
G Casp3 caspase 3 IEP RGD PMID:18288275 RGD:2293324 NCBI chr16:52,395,539...52,413,794
Ensembl chr16:52,395,540...52,413,732
JBrowse link
G Ccl2 C-C motif chemokine ligand 2 severity
treatment
IEP
IDA
mRNA:increased expression:pancreas RGD PMID:18642776 PMID:19050604 RGD:2307010, RGD:11062108 NCBI chr10:67,503,077...67,504,875
Ensembl chr10:67,503,077...67,504,875
JBrowse link
G Cd46 CD46 molecule severity IEP RGD PMID:16425382 RGD:1600479 NCBI chr13:109,104,122...109,134,903 JBrowse link
G Cd59b CD59b molecule severity IEP protein:decreased expression:pancreas, acinar cell RGD PMID:16425382 RGD:1600479 NCBI chr 3:110,914,008...110,932,489
Ensembl chr 3:110,914,091...110,935,310
JBrowse link
G Ctsb cathepsin B IEP protein:increased activity:pancreas (rat) RGD PMID:17723883 RGD:2315517 NCBI chr15:41,565,607...41,586,479
Ensembl chr15:41,565,611...41,586,478
JBrowse link
G Cxcl1 C-X-C motif chemokine ligand 1 IEP mRNA:increased expression:pancreatic acinar cell RGD PMID:19818401 RGD:5135004 NCBI chr14:17,477,542...17,479,321
Ensembl chr14:17,477,549...17,479,811
JBrowse link
G Cxcl2 C-X-C motif chemokine ligand 2 severity IEP RGD PMID:18642776 RGD:2307010 NCBI chr14:17,465,210...17,467,255
Ensembl chr14:17,465,242...17,467,255
JBrowse link
G Icam1 intercellular adhesion molecule 1 IEP protein:increased expression:pancreas, lung (rat) RGD PMID:20950211 RGD:4145335 NCBI chr 8:27,829,688...27,841,618
Ensembl chr 8:27,829,161...27,841,617
JBrowse link
G Il17a interleukin 17A IEP protein:increased expression:pancreas, serum (rat) RGD PMID:22990529 RGD:9068935 NCBI chr 9:30,640,844...30,644,331
Ensembl chr 9:30,640,844...30,644,331
JBrowse link
G Il1b interleukin 1 beta IEP mRNA:increased expression:peritoneal macrophages (rat) RGD PMID:22964727 RGD:7204517 NCBI chr 3:137,030,200...137,036,581
Ensembl chr 3:137,030,205...137,036,601
JBrowse link
G Il1rn interleukin 1 receptor antagonist ISO rat model treated with human protein RGD PMID:7736749 RGD:8551826 NCBI chr 3:27,509,836...27,525,738
Ensembl chr 3:27,509,798...27,525,732
JBrowse link
G Il6 interleukin 6 treatment IDA
IEP
protein:increased expression:plasma (rat) RGD PMID:11780340 PMID:19050604 RGD:11062058, RGD:11062108 NCBI chr 4:5,889,999...5,894,575
Ensembl chr 4:5,889,999...5,894,610
JBrowse link
G Mif macrophage migration inhibitory factor IDA RGD PMID:12612911 RGD:727512 NCBI chr20:12,767,138...12,791,222
Ensembl chr 4:134,041,774...134,042,121
Ensembl chr20:134,041,774...134,042,121
JBrowse link
G Mmp2 matrix metallopeptidase 2 IEP mRNA:increased expression:pancreas (rat) RGD PMID:11590325 RGD:7207204 NCBI chr19:30,327,643...30,355,856
Ensembl chr19:30,327,643...30,355,856
JBrowse link
G Nfkbia NFKB inhibitor alpha treatment IEP RGD PMID:19174608 RGD:10414072 NCBI chr 6:78,593,844...78,597,307
Ensembl chr 6:78,593,847...78,597,072
JBrowse link
G Nos1 nitric oxide synthase 1 treatment IDA RGD PMID:23300603 RGD:7257665 NCBI chr12:44,276,011...44,456,371
Ensembl chr12:44,287,614...44,371,837
JBrowse link
G Nos2 nitric oxide synthase 2 IEP protein:increased enzyme activity:pancreas RGD PMID:15257108 RGD:2325241 NCBI chr10:64,313,335...64,349,221
Ensembl chr10:64,313,335...64,401,880
JBrowse link
G Pdx1 pancreatic and duodenal homeobox 1 IEP protein:increased expression:epithelial cell of pancreas (rat) RGD PMID:12210084 RGD:2311232 NCBI chr12:12,793,957...12,799,156
Ensembl chr12:12,793,957...12,799,156
JBrowse link
G Pthlh parathyroid hormone-like hormone ISO CTD Direct Evidence: marker/mechanism CTD PMID:25035110 NCBI chr 4:181,919,400...181,930,454
Ensembl chr 4:181,919,400...181,930,454
JBrowse link
G Rela RELA proto-oncogene, NF-kB subunit IEP protein:increased expression:pancreas RGD PMID:18241655 RGD:2298789 NCBI chr 1:212,354,336...212,364,815
Ensembl chr 1:212,333,035...212,364,817
JBrowse link
G Selp selectin P IMP RGD PMID:19451746 RGD:2312307 NCBI chr13:79,009,379...79,044,994
Ensembl chr13:79,009,475...79,044,987
JBrowse link
G Serpine1 serpin family E member 1 disease_progression IEP
ISO
protein:increased expression:plasma (rat) RGD PMID:17446839 PMID:15257107 RGD:8547894, RGD:13208542 NCBI chr12:25,237,977...25,248,356
Ensembl chr12:25,237,952...25,248,357
JBrowse link
G Serpinf2 serpin family F member 2 IDA protein:increased expression:plasma RGD PMID:10423332 RGD:1625538 NCBI chr10:60,770,698...60,778,782
Ensembl chr10:60,770,698...60,778,996
JBrowse link
G Tacr1 tachykinin receptor 1 IEP mRNA,protein:increased expression:lung RGD PMID:12857498 RGD:5147821 NCBI chr 4:114,920,844...115,089,733
Ensembl chr 4:116,478,617...116,647,492
JBrowse link
G Tbxas1 thromboxane A synthase 1 IDA RGD PMID:9700944 RGD:1601470 NCBI chr 4:68,631,841...68,803,959
Ensembl chr 4:68,631,838...68,803,969
JBrowse link
G Tlr2 toll-like receptor 2 IEP mRNA:increased expression:liver RGD PMID:16524509 RGD:2312724 NCBI chr 2:171,499,189...171,504,831
Ensembl chr 2:171,497,060...171,520,194
JBrowse link
G Tlr4 toll-like receptor 4 IEP mRNA:increased expression:liver RGD PMID:16524509 RGD:2312724 NCBI chr 5:85,161,247...85,174,882
Ensembl chr 5:85,161,192...85,175,007
JBrowse link
G Tlr9 toll-like receptor 9 IEP mRNA, protein:increased expression:pancreas (rat) RGD PMID:18376319 RGD:5130184 NCBI chr 8:115,743,407...115,747,523
Ensembl chr 8:115,742,889...115,750,148
JBrowse link
acute pancreatitis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arf1 ARF GTPase 1 treatment ISO RGD PMID:22570480 RGD:9684857 NCBI chr10:43,997,983...44,014,461 JBrowse link
G Birc5 baculoviral IAP repeat-containing 5 IEP mRNA,protein:increased expression:pancreas RGD PMID:19726343 RGD:9586043 NCBI chr10:103,567,369...103,580,069
Ensembl chr10:103,572,080...103,582,155
JBrowse link
G Bmi1 BMI1 proto-oncogene, polycomb ring finger ISO protein:increased expression:pancreatic acinar cell: RGD PMID:19585519 RGD:9491843 NCBI chr17:86,240,683...86,250,044
Ensembl chr17:86,243,491...86,250,024
JBrowse link
G Cck cholecystokinin disease_progression ISO protein:decreased expression:blood plasma (human) RGD PMID:11185710 RGD:407419866 NCBI chr 8:130,031,012...130,037,702
Ensembl chr 8:130,031,013...130,037,686
JBrowse link
G Cd163 CD163 molecule ISO associated with liver disease;protein:increased expression:blood serum (human) RGD PMID:26339412 RGD:11251207 NCBI chr 4:158,770,751...158,804,146
Ensembl chr 4:158,770,749...158,804,146
JBrowse link
G Cx3cl1 C-X3-C motif chemokine ligand 1 treatment IMP RGD PMID:22213034 RGD:9491790 NCBI chr19:10,233,326...10,244,856
Ensembl chr19:10,233,329...10,242,999
JBrowse link
G F3 coagulation factor III, tissue factor ISO protein:increased expression:serum (human, mouse) RGD PMID:27923687 RGD:14398732 NCBI chr 2:212,511,675...212,523,375
Ensembl chr 2:212,511,680...212,523,369
JBrowse link
G F7 coagulation factor VII treatment ISO human protein in a rat model RGD PMID:17506000 RGD:11049543 NCBI chr16:83,191,896...83,202,775
Ensembl chr16:83,191,914...83,202,738
JBrowse link
G Il10 interleukin 10 no_association ISO DNA:SNP:promoter:-1082G>A (human)
DNA:SNP:promoter: -819T>C (human)
RGD PMID:27173345 PMID:27173345 RGD:14975140, RGD:14975140 NCBI chr13:45,024,921...45,029,586
Ensembl chr13:45,025,087...45,029,580
JBrowse link
G Irf9 interferon regulatory factor 9 IEP mRNA,protein:increased expression:kidney RGD PMID:32462510 RGD:125093744 NCBI chr15:33,065,422...33,071,881
Ensembl chr15:33,065,659...33,071,879
JBrowse link
G Kit KIT proto-oncogene receptor tyrosine kinase IEP mRNA,protein:decreased expression:jejunum RGD PMID:23599644 RGD:12910752 NCBI chr14:32,901,615...32,978,895
Ensembl chr14:32,903,033...32,978,812
JBrowse link
G Lep leptin IEP associated with fatty liver disease; protein:increased expression:serum: RGD PMID:26634430 RGD:11552763 NCBI chr 4:58,626,529...58,640,663
Ensembl chr 4:58,626,523...58,640,661
JBrowse link
G Mir155 microRNA 155 severity ISO RGD PMID:29937734 PMID:30497068 RGD:21403683, RGD:21408596 NCBI chr11:37,261,114...37,261,178
Ensembl chr11:37,261,114...37,261,178
JBrowse link
G Mtnr1b melatonin receptor 1B IMP RGD PMID:12510864 RGD:9588676 NCBI chr 8:12,638,219...12,652,737
Ensembl chr 8:20,919,593...20,934,109
JBrowse link
G Reg3a regenerating islet-derived 3 alpha severity IMP RGD PMID:19129610 RGD:9850139 NCBI chr 4:112,430,397...112,433,163
Ensembl chr 4:112,430,424...112,433,163
JBrowse link
G Reg3b regenerating family member 3 beta severity IMP RGD PMID:18437087 RGD:9831433 NCBI chr 4:112,419,776...112,423,014
Ensembl chr 4:112,419,776...112,423,014
JBrowse link
G Serpina1 serpin family A member 1 IEP
ISO
associated with fatty liver disease; protein:decreased expression:serum: RGD PMID:26634430 PMID:26634430 RGD:11552763, RGD:11552763 NCBI chr 6:128,631,101...128,653,125
Ensembl chr 6:128,619,382...128,660,703
JBrowse link
G Tlr4 toll-like receptor 4 ISO mRNA,protein:increased expression:liver: RGD PMID:18436016 RGD:14697701 NCBI chr 5:85,161,247...85,174,882
Ensembl chr 5:85,161,192...85,175,007
JBrowse link
G Trem1 triggering receptor expressed on myeloid cells 1 severity
ameliorates
ISO
IDA
RGD PMID:26250893 PMID:19787284 RGD:11522077, RGD:127284839 NCBI chr 9:20,259,227...20,276,879
Ensembl chr 9:20,261,408...20,276,892
JBrowse link
adrenocorticotropic hormone deficiency term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rpe65 retinoid isomerohydrolase RPE65 ISO ClinVar Annotator: match by term: ACTH deficiency ClinVar PMID:9326941 PMID:9501220 PMID:9843205 PMID:18632300 PMID:25741868 More... NCBI chr 2:251,425,228...251,457,209
Ensembl chr 2:251,425,368...251,457,156
JBrowse link
G Tbx19 T-box transcription factor 19 ISO
ISS
OMIM:201400
ClinVar Annotator: match by term: ACTH deficiency | ClinVar Annotator: match by term: TBX19-related condition
CTD Direct Evidence: marker/mechanism
OMIM
MouseDO
ClinVar
CTD
PMID:2830787 PMID:9536098 PMID:11290323 PMID:12651888 PMID:15476446 More... NCBI chr13:77,450,848...77,484,475
Ensembl chr13:79,983,935...80,007,023
JBrowse link
Adult Pancreatic Cancer term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ahr aryl hydrocarbon receptor ISO CTD Direct Evidence: marker/mechanism CTD PMID:12203118 NCBI chr 6:57,961,423...57,998,901
Ensembl chr 6:57,961,423...57,998,901
JBrowse link
alcoholic pancreatitis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Car2 carbonic anhydrase 2 ISO RGD PMID:15831920 RGD:408425973 NCBI chr 2:88,462,883...88,478,012
Ensembl chr 2:88,462,872...88,478,064
JBrowse link
G Cck cholecystokinin disease_progression ISO protein:decreased expression:blood plasma (human) RGD PMID:11185710 RGD:407419866 NCBI chr 8:130,031,012...130,037,702
Ensembl chr 8:130,031,013...130,037,686
JBrowse link
G Cftr CF transmembrane conductance regulator ISO DNA:missense mutations: :p.L1156F, Q1352H (human) RGD PMID:26089335 RGD:11566036 NCBI chr 4:47,422,084...47,694,646
Ensembl chr 4:47,526,735...47,694,643
JBrowse link
G Pthlh parathyroid hormone-like hormone ISO CTD Direct Evidence: marker/mechanism CTD PMID:22280800 NCBI chr 4:181,919,400...181,930,454
Ensembl chr 4:181,919,400...181,930,454
JBrowse link
G Ugt1a7c UDP glucuronosyltransferase 1 family, polypeptide A7C ISO DNA:polymorphisms: :p.N129K, p.R131K, p.W208R (human) RGD PMID:12806614 RGD:2317503 NCBI chr 9:88,739,577...88,808,465
Ensembl chr 9:96,144,786...96,256,264
JBrowse link
annular pancreas term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gdf1 growth differentiation factor 1 ISS OMIM:167750 MouseDO NCBI chr16:19,131,271...19,146,480
Ensembl chr16:19,131,276...19,146,480
JBrowse link
G Ihh Indian hedgehog signaling molecule ISS OMIM:167750 MouseDO NCBI chr 9:83,952,986...83,959,203
Ensembl chr 9:83,952,986...83,959,203
JBrowse link
autoimmune pancreatitis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Car2 carbonic anhydrase 2 ISO RGD PMID:15831920 RGD:408425973 NCBI chr 2:88,462,883...88,478,012
Ensembl chr 2:88,462,872...88,478,064
JBrowse link
G RT1-Bb RT1 class II, locus Bb severity ISO DNA:polymorphisms, haplotype:cds:HLA-DQB1*0302 (human) RGD PMID:18155707 RGD:5147621 NCBI chr20:4,598,475...4,604,118
Ensembl chr20:4,598,475...4,604,118
JBrowse link
Calcific Pancreatitis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Reg1a regenerating family member 1 alpha ISO protein:decreased expression:pancreatic juice (human) RGD PMID:3147713 RGD:9850117 NCBI chr 4:112,450,466...112,453,130
Ensembl chr 4:112,450,468...112,453,585
JBrowse link
carnitine palmitoyltransferase I deficiency term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cpt1a carnitine palmitoyltransferase 1A ISO
ISS
ClinVar Annotator: match by term: Carnitine palmitoyl transferase 1A deficiency
OMIM:255120
CTD Direct Evidence: marker/mechanism
OMIM
ClinVar
MouseDO
CTD
PMID:9048718 PMID:9536098 PMID:9691089 PMID:11350182 PMID:11350183 More... NCBI chr 1:209,993,881...210,056,329
Ensembl chr 1:209,993,875...210,056,326
JBrowse link
Carnitine Palmitoyltransferase II Deficiency, Infantile term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cpt2 carnitine palmitoyltransferase 2 ISO CTD Direct Evidence: marker/mechanism
ClinVar Annotator: match by term: CPT II DEFICIENCY, HEPATIC | ClinVar Annotator: match by term: CPT2 DEFICIENCY, INFANTILE
CTD
OMIM
ClinVar
PMID:736528 PMID:835844 PMID:1086878 PMID:1528846 PMID:1999498 More... NCBI chr 5:127,893,450...127,911,347
Ensembl chr 5:127,893,207...127,910,818
JBrowse link
Chronic Experimental Pancreatitis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cbs cystathionine beta synthase IEP protein:increased expression:arcuate nucleus (rat) RGD PMID:27778022 RGD:38456012 NCBI chr20:9,709,394...9,733,925
Ensembl chr20:9,709,395...9,734,066
JBrowse link
G Gli1 GLI family zinc finger 1 IEP RGD PMID:24782623 RGD:12879405 NCBI chr 7:65,042,237...65,054,888
Ensembl chr 7:65,042,237...65,054,540
JBrowse link
G Il1b interleukin 1 beta ISO RGD PMID:22173919 RGD:10044253 NCBI chr 3:137,030,200...137,036,581
Ensembl chr 3:137,030,205...137,036,601
JBrowse link
G Nqo1 NAD(P)H quinone dehydrogenase 1 treatment IEP RGD PMID:22359633 RGD:11035224 NCBI chr19:52,205,374...52,220,267
Ensembl chr19:52,205,314...52,220,260
JBrowse link
G Ptch1 patched 1 IEP RGD PMID:24782623 RGD:12879405 NCBI chr17:1,548,449...1,613,461
Ensembl chr17:1,548,449...1,613,461
JBrowse link
G Smo smoothened, frizzled class receptor IEP RGD PMID:24782623 RGD:12879405 NCBI chr 4:59,311,084...59,341,280
Ensembl chr 4:59,311,041...59,341,281
JBrowse link
G Spink1 serine peptidase inhibitor, Kazal type 1 treatment IDA
IEP
protein:increased secretion:pancreatic juice: RGD PMID:19904222 PMID:12123090 PMID:22173919 RGD:10043091, RGD:10044261, RGD:10044253 NCBI chr18:36,121,626...36,133,596
Ensembl chr18:36,076,399...36,133,545
JBrowse link
G Tgfb1 transforming growth factor, beta 1 IEP RGD PMID:26645248 RGD:14995470 NCBI chr 1:90,324,312...90,340,627
Ensembl chr 1:90,324,046...90,340,899
JBrowse link
Chronic Pancreatitis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ager advanced glycosylation end product-specific receptor ISO protein:decreased expression:serum RGD PMID:31870801 RGD:597621670 NCBI chr20:4,152,758...4,155,956
Ensembl chr20:4,151,965...4,155,685
JBrowse link
G Apoa4 apolipoprotein A4 ISO protein:decreased expression:blood plasma (human) RGD PMID:11555832 RGD:5685680 NCBI chr 8:55,435,779...55,438,160
Ensembl chr 8:55,434,168...55,438,164
JBrowse link
G Bad BCL2-associated agonist of cell death severity IEP RGD PMID:22549003 RGD:10053701 NCBI chr 1:213,562,719...213,572,034
Ensembl chr 1:213,562,187...213,572,034
JBrowse link
G Bmi1 BMI1 proto-oncogene, polycomb ring finger ISO protein:increased expression:pancreatic acinar cell:
protein:increased expression:exocrine pancreas:
RGD PMID:19585519 PMID:19585519 RGD:9491843, RGD:9491843 NCBI chr17:86,240,683...86,250,044
Ensembl chr17:86,243,491...86,250,024
JBrowse link
G Ca1 carbonic anhydrase 1 ISO RGD PMID:12806141 RGD:408425977 NCBI chr 2:88,550,681...88,593,454
Ensembl chr 2:88,495,475...88,593,454
JBrowse link
G Car2 carbonic anhydrase 2 ISO RGD PMID:12806141 RGD:408425977 NCBI chr 2:88,462,883...88,478,012
Ensembl chr 2:88,462,872...88,478,064
JBrowse link
G Cel carboxyl ester lipase ISO CTD Direct Evidence: marker/mechanism CTD PMID:25774637 NCBI chr 3:32,281,518...32,289,019
Ensembl chr 3:32,281,518...32,289,019
JBrowse link
G Cftr CF transmembrane conductance regulator ISO CTD Direct Evidence: marker/mechanism
ClinVar Annotator: match by term: Chronic pancreatitis
CTD
ClinVar
PMID:10746558 PMID:15536480 PMID:16189704 PMID:16193325 PMID:16244288 More... NCBI chr 4:47,422,084...47,694,646
Ensembl chr 4:47,526,735...47,694,643
JBrowse link
G Col1a1 collagen type I alpha 1 chain treatment IDA RGD PMID:21926544 RGD:8552779 NCBI chr10:80,380,458...80,397,461
Ensembl chr10:80,380,453...80,397,460
JBrowse link
G Cpa1 carboxypeptidase A1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:23955596 NCBI chr 4:59,257,417...59,263,544
Ensembl chr 4:60,224,801...60,230,928
JBrowse link
G Ctrc chymotrypsin C ISO CTD Direct Evidence: marker/mechanism
ClinVar Annotator: match by term: Chronic pancreatitis | ClinVar Annotator: match by term: Pancreatitis, chronic, susceptibility to
CTD
ClinVar
PMID:18059268 PMID:18172691 PMID:19453252 PMID:20625975 PMID:22427236 More... NCBI chr 5:154,147,314...154,156,540
Ensembl chr 5:159,430,335...159,439,545
JBrowse link
G Cygb cytoglobin IEP RGD PMID:14647402 RGD:9685173 NCBI chr10:102,376,506...102,386,272
Ensembl chr10:102,376,507...102,386,272
JBrowse link
G Dll1 delta like canonical Notch ligand 1 ISO mRNA,protein:increased expression:pancreas RGD PMID:17114010 RGD:6482236 NCBI chr 1:56,312,062...56,320,177
Ensembl chr 1:64,985,161...64,993,276
JBrowse link
G Ifng interferon gamma disease_progression IEP RGD PMID:11345142 RGD:10755767 NCBI chr 7:55,789,180...55,793,216
Ensembl chr 7:55,761,736...55,793,216
JBrowse link
G Jag1 jagged canonical Notch ligand 1 ISO mRNA,protein:increased expression:pancreas RGD PMID:17114010 RGD:6482236 NCBI chr 3:144,859,453...144,894,883
Ensembl chr 3:144,859,453...144,894,872
JBrowse link
G Ngf nerve growth factor IEP protein:increased expression:pancreas RGD PMID:16098667 RGD:5144071 NCBI chr 2:192,589,580...192,642,971
Ensembl chr 2:192,589,582...192,643,834
JBrowse link
G Ngfr nerve growth factor receptor ISO mRNA:increased expression:pancreas (human) RGD PMID:12741461 RGD:5508378 NCBI chr10:81,012,077...81,030,305
Ensembl chr10:81,012,089...81,030,305
JBrowse link
G Prss1 serine protease 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:18206817 NCBI chr 4:70,364,589...70,367,792
Ensembl chr 4:71,331,246...71,334,452
JBrowse link
G Pthlh parathyroid hormone-like hormone ISO CTD Direct Evidence: marker/mechanism CTD PMID:25035110 NCBI chr 4:181,919,400...181,930,454
Ensembl chr 4:181,919,400...181,930,454
JBrowse link
G Reg1a regenerating family member 1 alpha IEP protein:increased expression:pancreas, acinar cell, zymogen granule (rat) RGD PMID:12764608 RGD:9831428 NCBI chr 4:112,450,466...112,453,130
Ensembl chr 4:112,450,468...112,453,585
JBrowse link
G Reg3b regenerating family member 3 beta treatment IDA
IEP
protein:increased expression:pancreas, acinar cell, zymogen granule (rat) RGD PMID:10505754 PMID:12764608 RGD:9831401, RGD:9831428 NCBI chr 4:112,419,776...112,423,014
Ensembl chr 4:112,419,776...112,423,014
JBrowse link
G Rnf2 ring finger protein 2 ISO protein:increased expression:pancreas RGD PMID:19585519 RGD:9491843 NCBI chr13:66,103,943...66,136,038
Ensembl chr13:66,083,653...66,133,161
JBrowse link
G Spink1 serine peptidase inhibitor, Kazal type 1 ISO ClinVar Annotator: match by term: Chronic pancreatitis | ClinVar Annotator: match by term: Pancreatitis, chronic, susceptibility to
CTD Direct Evidence: marker/mechanism
ClinVar
CTD
RGD
PMID:10691414 PMID:10835640 PMID:11950815 PMID:12011155 PMID:12187509 More... RGD:1599102 NCBI chr18:36,121,626...36,133,596
Ensembl chr18:36,076,399...36,133,545
JBrowse link
Congenital Hyperinsulinism term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abcc8 ATP binding cassette subfamily C member 8 ISO ClinVar Annotator: match by term: Congenital hyperinsulinism | ClinVar Annotator: match by term: Familial hyperinsulinism | ClinVar Annotator: match by term: HYPERINSULINISM, NEONATAL
DNA:mutations:exon:multiple
DNA:missense mutations, nonsense mutations, splice-site mutations:CDS:multiple
DNA:missense mutations:exon:p.G1485E (c.4454G>A), p.D1506E (c.4518C>A), p.M1544K (c.4541T>A) (human)
DNA:mutations:exon, intron:multiple
DNA:deletion: :p.S1387del (human)
CTD Direct Evidence: marker/mechanism
ClinVar
CTD
RGD
PMID:3202066 PMID:7716548 PMID:8751851 PMID:8923011 PMID:9041101 More... RGD:704365, RGD:12790723, RGD:11069847, RGD:12790596, RGD:11067821, RGD:12790587, RGD:11070657, RGD:12743628 NCBI chr 1:105,734,992...105,816,272
Ensembl chr 1:105,734,992...105,815,982
JBrowse link
G Gck glucokinase ISO CTD Direct Evidence: marker/mechanism
ClinVar Annotator: match by term: Familial hyperinsulinism
CTD
ClinVar
PMID:15277402 PMID:19053014 PMID:19336674 PMID:21831042 PMID:23890519 More... NCBI chr14:84,999,019...85,041,098
Ensembl chr14:84,999,020...85,040,949
JBrowse link
G Glud1 glutamate dehydrogenase 1 ISO ClinVar Annotator: match by term: Familial hyperinsulinism ClinVar
RGD
PMID:22730017 PMID:23506826 PMID:25741868 PMID:31119523 PMID:32005694 More... RGD:1302513 NCBI chr16:9,646,569...9,680,215
Ensembl chr16:9,646,509...9,680,210
JBrowse link
G Hadh hydroxyacyl-CoA dehydrogenase ISO DNA:deletion:cds (human)
ClinVar Annotator: match by term: Familial hyperinsulinism
ClinVar
RGD
PMID:16725361 PMID:18414213 PMID:25741868 PMID:28492532 PMID:31209396 More... RGD:2306664 NCBI chr 2:222,462,049...222,504,446
Ensembl chr 2:222,462,049...222,504,446
JBrowse link
G Hnf4a hepatocyte nuclear factor 4, alpha ISO DNA:mutations: :
ClinVar Annotator: match by term: Congenital hyperinsulinism | ClinVar Annotator: match by term: Familial hyperinsulinism
ClinVar
RGD
PMID:10227563 PMID:10447526 PMID:10983627 PMID:12669197 PMID:15281001 More... RGD:12904701 NCBI chr 3:172,606,220...172,667,758
Ensembl chr 3:172,606,220...172,667,758
JBrowse link
G Kcnj11 potassium inwardly-rectifying channel, subfamily J, member 11 ISO CTD Direct Evidence: marker/mechanism
ClinVar Annotator: match by term: Congenital hyperinsulinism | ClinVar Annotator: match by term: Familial hyperinsulinism | ClinVar Annotator: match by term: HYPERINSULINISM, NEONATAL
DNA:SNPs:exon:c.151G>T, c.1017G>T (human)
DNA:missense mutations, frameshift mutations:CDS:multiple
DNA:deletion, frameshift mutation, missense mutations:exon:multiple
DNA:deletion, insertion:exon
DNA:missense mutation:exon:p.R34H (c.101G>A) (human)
CTD
ClinVar
RGD
PMID:9867219 PMID:10559219 PMID:11318841 PMID:11692183 PMID:11872696 More... RGD:12790723, RGD:11069847, RGD:12790587, RGD:12743643, RGD:12743624 NCBI chr 1:105,727,473...105,731,167
Ensembl chr 1:105,727,570...105,731,169
JBrowse link
G Kcnt2 potassium sodium-activated channel subfamily T member 2 ISO ClinVar Annotator: match by term: HYPERINSULINISM, NEONATAL | ClinVar Annotator: match by term: KCNT2-related condition ClinVar PMID:25741868 PMID:29069600 NCBI chr13:54,214,831...54,609,889
Ensembl chr13:54,215,307...54,607,924
JBrowse link
G Tbc1d4 TBC1 domain family, member 4 ISO RGD PMID:19470471 RGD:7248544 NCBI chr15:84,670,756...84,848,876
Ensembl chr15:84,670,756...84,848,693
JBrowse link
cystic fibrosis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adrb1 adrenoceptor beta 1 ISO RGD PMID:20203292 RGD:5129107 NCBI chr 1:265,777,103...265,780,114
Ensembl chr 1:265,766,079...265,849,237
JBrowse link
G Adrb2 adrenoceptor beta 2 ISO DNA:polymorphisms (human) RGD PMID:20203292 PMID:17502834 RGD:5129107, RGD:4145099 NCBI chr18:57,912,760...57,914,802
Ensembl chr18:57,911,348...57,914,803
JBrowse link
G Adrb3 adrenoceptor beta 3 ISO protein:increased expression:bronchus RGD PMID:20203292 RGD:5129107 NCBI chr16:71,544,603...71,547,410
Ensembl chr16:71,542,567...71,547,420
JBrowse link
G Ager advanced glycosylation end product-specific receptor severity ISO DNA:polymorphism, haplotype:promoter:g.-429T>C (rs1800625) (human) RGD PMID:21993476 PMID:24127697 RGD:6767553, RGD:8695959 NCBI chr20:4,152,758...4,155,956
Ensembl chr20:4,151,965...4,155,685
JBrowse link
G Akp3 alkaline phosphatase 3, intestine, not Mn requiring ISO mRNA,protein:decreased expression:intestine: RGD PMID:21970994 RGD:14349050 NCBI chr 9:87,804,680...87,808,715
Ensembl chr 9:95,248,840...95,256,616
JBrowse link
G Alpp alkaline phosphatase, placental ISO mRNA,protein:decreased expression:intestine: RGD PMID:21970994 RGD:14349050 NCBI chr 9:87,765,846...87,768,606
Ensembl chr 9:95,213,374...95,219,451
JBrowse link
G Asz1 ankyrin repeat, SAM and basic leucine zipper domain containing 1 ISO ClinVar Annotator: match by term: Cystic fibrosis ClinVar PMID:1695717 PMID:7691345 PMID:9725922 PMID:11781704 PMID:15520400 More... NCBI chr 4:46,400,485...46,456,085 JBrowse link
G Bglap bone gamma-carboxyglutamate protein ISO protein:decreased expression:serum RGD PMID:16622660 RGD:6483578 NCBI chr 2:176,136,341...176,137,318
Ensembl chr 2:176,136,341...176,137,318
JBrowse link
G C5 complement C5 severity ISO RGD PMID:3540828 RGD:5130162 NCBI chr 3:38,668,174...38,759,468
Ensembl chr 3:38,668,174...38,759,468
JBrowse link
G Capza2 capping actin protein of muscle Z-line subunit alpha 2 ISO ClinVar Annotator: match by term: Cystic fibrosis ClinVar PMID:1695717 PMID:7691345 PMID:9725922 PMID:11781704 PMID:15520400 More... NCBI chr 4:45,978,142...46,014,032
Ensembl chr 4:46,895,701...46,979,938
JBrowse link
G Cav1 caveolin 1 ISO ClinVar Annotator: match by term: Cystic fibrosis ClinVar PMID:1695717 PMID:7691345 PMID:9725922 PMID:11781704 PMID:15520400 More... NCBI chr 4:46,606,538...46,639,616
Ensembl chr 4:46,600,738...46,639,740
JBrowse link
G Ccl11 C-C motif chemokine ligand 11 ISO protein:increased expression:paranasal sinus RGD PMID:17999785 RGD:4145455 NCBI chr10:67,525,975...67,530,576
Ensembl chr10:67,525,862...67,530,575
JBrowse link
G Ccl17 C-C motif chemokine ligand 17 ISO mRNA, protein:increased expression:neutrophil RGD PMID:18026571 RGD:4145491 NCBI chr19:10,208,120...10,218,340
Ensembl chr19:10,208,120...10,209,895
JBrowse link
G Ccl2 C-C motif chemokine ligand 2 ISO protein:increased expression:respiratory system fluid/secretion RGD PMID:20438838 RGD:4143275 NCBI chr10:67,503,077...67,504,875
Ensembl chr10:67,503,077...67,504,875
JBrowse link
G Ccl4 C-C motif chemokine ligand 4 ISO RGD PMID:20575639 PMID:19386685 RGD:5130907, RGD:5130902 NCBI chr10:68,963,893...68,965,728
Ensembl chr10:68,950,289...68,965,722
JBrowse link
G Ccr3 C-C motif chemokine receptor 3 ISO protein:increased expression:respiratory system fluid/secretion, neutrophil RGD PMID:19017998 RGD:4145632 NCBI chr 8:132,463,533...132,511,601
Ensembl chr 8:132,463,788...132,511,593
JBrowse link
G Cd14 CD14 molecule susceptibility ISO protein:increased expression:Macrophages, Alveolar
DNA:polymorphism:promoter:c. -159 C>T
RGD PMID:20302606 PMID:19466271 RGD:4144794, RGD:4144796 NCBI chr18:28,609,558...28,611,409
Ensembl chr18:28,608,883...28,611,292
JBrowse link
G Cd40lg CD40 ligand ISO protein:increased expression:blood RGD PMID:15102009 RGD:7248443 NCBI chr  X:140,164,341...140,176,057
Ensembl chr  X:140,164,302...140,176,475
JBrowse link
G Cftr CF transmembrane conductance regulator severity
no_association
disease_progression
ISO
ISS
IMP
DNA:missense mutation:exon:p.W1282X(human)
ClinVar Annotator: match by term: Cystic fibrosis | ClinVar Annotator: match by term: MUCOVISCIDOSIS | ClinVar Annotator: match by term: Mucoviscidosis | ClinVar Annotator: match by term: Pseudomonas aeruginosa, susceptibility to chronic infection by, in cystic fibrosis | ClinVar Annotator: match by term: Sweat chloride elevation without cystic fibrosis
ClinVar Annotator: match by term: Cystic fibrosis | ClinVar Annotator: match by term: MUCOVISCIDOSIS | ClinVar Annotator: match by term: Mucoviscidosis | ClinVar Annotator: match by term: Sweat chloride elevation without cystic fibrosis
ClinVar Annotator: match by term: Cystic fibrosis | ClinVar Annotator: match by term: Mucoviscidosis | ClinVar Annotator: match by term: Pseudomonas aeruginosa, susceptibility to chronic infection by, in cystic fibrosis | ClinVar Annotator: match by term: Sweat chloride elevation without cystic fibrosis
OMIM:219700
CTD Direct Evidence: marker/mechanism
DNA,protein:mutations,substitutions:exon:
DNA:mutation:exon:p.R117H(human)
DNA:nonsense mutation:cds;c. 2143delT (human)
DNA:mutation:cds:p.G551D (mouse)
DNA:insertion:exon:c.3904_3905insT (human)
DNA:mutations:multiple
DNA:mutation: :p.N1303K (human)
DNA:splice-site mutation:intron: 3272-26A>G (human)
DNA:mutations: :
DNA:deletion:exon:p.F508del(mouse)
DNA:missense mutations: :p.F508C, S1251N
DNA:missende mutation:exon:p.G551D (human)
protein:altered expression:lung
ClinVar
MouseDO
CTD
OMIM
RGD
PMID:754013 PMID:1282016 PMID:1282900 PMID:1283148 PMID:1283149 More... RGD:4140436, RGD:126928119, RGD:11566051, RGD:734772, RGD:4140394, RGD:4140393, RGD:4140439, RGD:4140481, RGD:4140401, RGD:4140392, RGD:4140429, RGD:4140440, RGD:4140450, RGD:4140464, RGD:4140428, RGD:4140465, RGD:4140438, RGD:4140442, RGD:4140422, RGD:4139910, RGD:4140435 NCBI chr 4:47,422,084...47,694,646
Ensembl chr 4:47,526,735...47,694,643
JBrowse link
G Cftrem1Ang cystic fibrosis transmembrane conductance regulator; CRISPR/Cas9 induced mutant 1, Ang IMP RGD PMID:31942562 RGD:126928119
G Cftrem1Sage cystic fibrosis transmembrane conductance regulator; ZFN induced mutant 1 Sage IMP RGD PMID:24608905 RGD:11566051
G Cftrem2Ang cystic fibrosis transmembrane conductance regulator; CRISPR/Cas9 induced mutant 2, Ang IMP RGD PMID:31942562 RGD:126928119
G Clca1 chloride channel accessory 1 ISO mRNA, protein:increased expression:respiratory system mucosa RGD PMID:15218996 RGD:4145657 NCBI chr 2:233,938,677...233,964,369
Ensembl chr 2:236,599,022...236,624,714
JBrowse link
G Clcn2 chloride voltage-gated channel 2 IDA RGD PMID:8811102 RGD:704390 NCBI chr11:93,702,382...93,716,059
Ensembl chr11:93,702,360...93,716,059
JBrowse link
G Cln6 CLN6, transmembrane ER protein ISO ClinVar Annotator: match by term: Cystic fibrosis ClinVar PMID:12815591 PMID:19135028 PMID:21990111 PMID:25741868 PMID:28492532 NCBI chr 8:63,303,356...63,318,360
Ensembl chr 8:72,198,712...72,213,776
JBrowse link
G Cpa1 carboxypeptidase A1 ISO ClinVar Annotator: match by term: Mucoviscidosis ClinVar PMID:23955596 PMID:25741868 PMID:28492532 NCBI chr 4:59,257,417...59,263,544
Ensembl chr 4:60,224,801...60,230,928
JBrowse link
G Csf3r colony stimulating factor 3 receptor ISO protein:increased expression:respiratory system fluid/secretion, neutrophil RGD PMID:19293384 RGD:5133738 NCBI chr 5:143,583,126...143,604,382
Ensembl chr 5:143,583,213...143,602,411
JBrowse link
G Cttnbp2 cortactin binding protein 2 ISO ClinVar Annotator: match by term: Cystic fibrosis ClinVar PMID:11938439 PMID:22020151 PMID:25910067 PMID:28492532 PMID:28544683 More... NCBI chr 4:46,800,975...46,964,681
Ensembl chr 4:47,766,870...47,930,540
JBrowse link
G Cxcl1 C-X-C motif chemokine ligand 1 ISO protein:increased expression:respiratory system fluid/secretion
protein:increased expression:sputum
RGD PMID:20818377 PMID:20818377 RGD:5135034, RGD:5135034 NCBI chr14:17,477,542...17,479,321
Ensembl chr14:17,477,549...17,479,811
JBrowse link
G Cxcl2 C-X-C motif chemokine ligand 2 ISO protein:increased expression:respiratory system fluid/secretion
protein:increased expression:sputum
RGD PMID:20818377 PMID:20818377 RGD:5135034, RGD:5135034 NCBI chr14:17,465,210...17,467,255
Ensembl chr14:17,465,242...17,467,255
JBrowse link
G Cxcl3 C-X-C motif chemokine ligand 3 ISO RGD PMID:19597126 RGD:5135456 NCBI chr14:17,571,900...17,573,624
Ensembl chr14:17,571,900...17,573,624
JBrowse link
G Cxcl9 C-X-C motif chemokine ligand 9 ISO RGD PMID:19597126 RGD:5135456 NCBI chr14:16,007,166...16,012,077
Ensembl chr14:16,007,204...16,014,299
JBrowse link
G Cxcr2 C-X-C motif chemokine receptor 2 ISO RGD PMID:20818377 RGD:5135034 NCBI chr 9:83,178,645...83,185,017
Ensembl chr 9:83,183,808...83,188,602
JBrowse link
G Cxcr3 C-X-C motif chemokine receptor 3 ISO protein:increased expression:respiratory system fluid/secretion, neutrophil RGD PMID:19017998 RGD:4145632 NCBI chr  X:70,884,293...70,886,944
Ensembl chr  X:70,883,958...70,886,871
JBrowse link
G Cyp1a1 cytochrome P450, family 1, subfamily a, polypeptide 1 severity ISO DNA:polymorphism (human) RGD PMID:14593914 RGD:4889126 NCBI chr 8:66,991,940...66,998,014
Ensembl chr 8:66,991,970...66,998,012
JBrowse link
G Dctn4 dynactin subunit 4 ISO CTD Direct Evidence: marker/mechanism CTD PMID:22772370 NCBI chr18:53,982,355...54,009,409
Ensembl chr18:56,252,780...56,279,842
JBrowse link
G Defb4 defensin beta 4 ISO protein:increased expression:respiratory system fluid/secretion RGD PMID:9843998 RGD:4892267 NCBI chr16:77,352,911...77,356,104
Ensembl chr16:77,352,911...77,356,104
JBrowse link
G Defb5 defensin beta 5 ISO protein:increased expression:respiratory system fluid/secretion RGD PMID:9843998 RGD:4892267 NCBI chr16:77,315,424...77,317,828
Ensembl chr16:77,315,424...77,317,828
JBrowse link
G Edn1 endothelin 1 ISO protein:increased expression:sputum (human) RGD PMID:10445603 RGD:4145062 NCBI chr17:22,660,799...22,666,687
Ensembl chr17:22,660,799...22,666,687
JBrowse link
G Eng endoglin ISO CTD Direct Evidence: marker/mechanism CTD PMID:30806029 NCBI chr 3:36,332,190...36,370,324
Ensembl chr 3:36,326,202...36,370,933
JBrowse link
G Ephx1 epoxide hydrolase 1 ISO ClinVar Annotator: match by term: Mucoviscidosis ClinVar PMID:7516776 PMID:9288046 PMID:12704386 PMID:17532303 PMID:19017876 More... NCBI chr13:95,246,079...95,275,852
Ensembl chr13:95,246,080...95,321,981
JBrowse link
G Fas Fas cell surface death receptor severity ISO RGD PMID:18685642 RGD:12903971 NCBI chr 1:241,212,155...241,245,774
Ensembl chr 1:241,205,935...241,246,104
JBrowse link
G Faslg Fas ligand ISO RGD PMID:10567629 RGD:12904024 NCBI chr13:76,680,885...76,706,042
Ensembl chr13:76,688,243...76,695,503
JBrowse link
G Fcgr2a Fc gamma receptor 2A susceptibility ISO ClinVar Annotator: match by term: Cystic fibrosis | ClinVar Annotator: match by term: Pseudomonas aeruginosa, susceptibility to chronic infection by, in cystic fibrosis
CTD Direct Evidence: marker/mechanism
ClinVar
CTD
OMIM
PMID:8636449 PMID:9843982 PMID:10675363 PMID:15367919 PMID:19915573 More... NCBI chr13:85,813,516...85,830,269
Ensembl chr13:85,855,437...85,864,394
Ensembl chr13:85,855,437...85,864,394
JBrowse link
G Gclc glutamate-cysteine ligase, catalytic subunit ISO RGD PMID:16690975 RGD:5134682 NCBI chr 8:87,510,251...87,548,896
Ensembl chr 8:87,510,463...87,548,893
JBrowse link
G Gstm1 glutathione S-transferase mu 1 no_association
severity
ISO DNA:deletion:: (human)
DNA:deletion: : (human)
DNA:deletion, haplotype:: (human)
RGD PMID:24593045 PMID:22407040 PMID:10195071 PMID:20140303 PMID:23758905 RGD:10401929, RGD:14700942, RGD:12798506, RGD:12792246, RGD:12792207 NCBI chr 2:198,338,005...198,346,007
Ensembl chr 2:198,338,008...198,343,569
JBrowse link
G Gstm3 glutathione S-transferase mu 3 ISO RGD PMID:15115915 RGD:5135040 NCBI chr 2:198,295,442...198,300,742
Ensembl chr 2:198,295,442...198,300,667
JBrowse link
G Gstm5 glutathione S-transferase, mu 5 ISO RGD PMID:15115915 RGD:5135040 NCBI chr 2:198,219,769...198,222,732
Ensembl chr 2:198,219,647...198,222,731
JBrowse link
G Gstp1 glutathione S-transferase pi 1 ISO GAD PMID:15118671 RGD:1331525 NCBI chr 1:210,767,237...210,770,242
Ensembl chr 1:210,767,237...210,769,705
JBrowse link
G Gstt1 glutathione S-transferase theta 1 severity
no_association
ISO DNA:deletion, haplotype:: (human)
DNA:deletion: : (human)
DNA:deletion:: (human)
RGD PMID:23758905 PMID:22407040 PMID:20140303 PMID:24593045 RGD:12792207, RGD:14700942, RGD:12792246, RGD:10401929 NCBI chr20:12,856,068...12,873,020
Ensembl chr20:12,856,083...12,873,019
JBrowse link
G Havcr2 hepatitis A virus cellular receptor 2 ISO RGD PMID:21263071 RGD:5135530 NCBI chr10:31,383,801...31,415,334
Ensembl chr10:31,383,925...31,413,872
JBrowse link
G Hfe homeostatic iron regulator severity ISO DNA:missense mutations: :p.H63D, p.C282Y (human)
ClinVar Annotator: match by term: Cystic fibrosis
ClinVar
RGD
PMID:8696333 PMID:8896550 PMID:8943161 PMID:9106528 PMID:9162021 More... RGD:14701045 NCBI chr17:41,841,302...41,849,359
Ensembl chr17:41,841,252...41,851,208
JBrowse link
G Hmox1 heme oxygenase 1 ISO mRNA:protein:increased expression:lung RGD PMID:15184199 RGD:4145410 NCBI chr19:13,452,365...13,479,823
Ensembl chr19:13,472,884...13,479,818
JBrowse link
G Hspa1a heat shock protein family A (Hsp70) member 1A severity ISO DNA:polymorphism, haplotype: :1267A>G (human) RGD PMID:21993476 PMID:21993476 RGD:6767553, RGD:6767553 NCBI chr20:3,875,411...3,877,866
Ensembl chr20:3,855,780...3,877,979
JBrowse link
G Hspd1 heat shock protein family D (Hsp60) member 1 ISO protein:increased expression:serum: RGD PMID:8255671 RGD:12910480 NCBI chr 9:64,073,610...64,084,332
Ensembl chr 9:64,073,611...64,084,037
JBrowse link
G Igf1 insulin-like growth factor 1 ISO protein:increased expression:respiratory tract epithelium (rat) RGD PMID:22461702 RGD:12904899 NCBI chr 7:24,169,608...24,249,446
Ensembl chr 7:24,130,137...24,246,764
JBrowse link
G Igfbp3 insulin-like growth factor binding protein 3 ISO protein:decreased expression:serum: RGD PMID:15310308 RGD:12743589 NCBI chr14:86,270,208...86,277,944
Ensembl chr14:86,270,208...86,277,944
JBrowse link
G Il13 interleukin 13 ISO mRNA:increased expression:bronchoalveolar lavage fluid RGD PMID:15463872 RGD:4312589 NCBI chr10:38,290,926...38,293,483
Ensembl chr10:38,290,926...38,293,483
JBrowse link
G Il17a interleukin 17A ISO protein:increased expression:serum
protein:increased expression:lung
RGD PMID:19342416 PMID:21109552 RGD:4889105, RGD:4889130 NCBI chr 9:30,640,844...30,644,331
Ensembl chr 9:30,640,844...30,644,331
JBrowse link
G Il18 interleukin 18 ISO protein:increased expression:serum RGD PMID:20026745 RGD:4889551 NCBI chr 8:59,802,072...59,829,275
Ensembl chr 8:59,809,592...59,831,286
JBrowse link
G Il18bp interleukin 18 binding protein ISO protein:increased expression:serum RGD PMID:20026745 RGD:4889551 NCBI chr 1:165,784,916...165,787,990
Ensembl chr 1:165,784,069...165,786,955
JBrowse link
G Il1a interleukin 1 alpha severity ISO protein:increased expression:serum RGD PMID:8333775 RGD:4142849 NCBI chr 3:136,979,804...136,990,236
Ensembl chr 3:136,979,805...136,998,013
JBrowse link
G Il1b interleukin 1 beta severity ISO DNA:SNPs: :rs1143634, rs1143639 (human)
protein:increased expression:sputum
RGD PMID:19431193 PMID:10515411 RGD:4142844, RGD:4143181 NCBI chr 3:137,030,200...137,036,581
Ensembl chr 3:137,030,205...137,036,601
JBrowse link
G Il1rn interleukin 1 receptor antagonist ISO protein:increased expression:sputum
protein:decreased expression:blood, neutrophil
RGD PMID:10515411 PMID:12547728 RGD:4143181, RGD:4143175 NCBI chr 3:27,509,836...27,525,738
Ensembl chr 3:27,509,798...27,525,732
JBrowse link
G Il6 interleukin 6 ISO protein:increased expression:blood
protein:increased expression:lung
RGD PMID:16403491 PMID:20438838 RGD:5128672, RGD:4143275 NCBI chr 4:5,889,999...5,894,575
Ensembl chr 4:5,889,999...5,894,610
JBrowse link
G Il9 interleukin 9 ISO protein:increased expression:respiratory system mucosa RGD PMID:12782818 RGD:5128699 NCBI chr17:8,117,028...8,120,151
Ensembl chr17:8,117,028...8,120,151
JBrowse link
G Il9r interleukin 9 receptor ISO protein:increased expression:respiratory system mucosa RGD PMID:12782818 RGD:5128699 NCBI chr10:15,936,156...15,947,613
Ensembl chr10:15,936,156...15,947,613
JBrowse link
G Irf1 interferon regulatory factor 1 ISO protein:decreased expression:intestine epithelium, nasal cavity epithelium RGD PMID:10930443 RGD:5128720 NCBI chr10:38,417,935...38,424,946
Ensembl chr10:38,417,148...38,424,947
JBrowse link
G Lep leptin severity ISO RGD PMID:18353734 RGD:5128819 NCBI chr 4:58,626,529...58,640,663
Ensembl chr 4:58,626,523...58,640,661
JBrowse link
G Lta lymphotoxin alpha severity ISO DNA:polymorphism, haplotype: :252A>G (human) RGD PMID:21993476 RGD:6767553 NCBI chr20:3,622,291...3,625,852
Ensembl chr20:3,623,527...3,625,533
JBrowse link
G Mbl2 mannose binding lectin 2 severity ISO protein:decreased secretion:serum (human)
ClinVar Annotator: match by term: Cystic fibrosis
DNA:polymorphisms:5' utr, exon:multiple (human)
ClinVar
RGD
PMID:7707811 PMID:8206524 PMID:10071515 PMID:10449435 PMID:15674393 More... RGD:4889443, RGD:4889447 NCBI chr 1:237,429,873...237,465,567
Ensembl chr 1:237,429,973...237,437,546
JBrowse link
G Met MET proto-oncogene, receptor tyrosine kinase ISO ClinVar Annotator: match by term: Cystic fibrosis ClinVar PMID:1695717 PMID:7691345 PMID:9725922 PMID:11781704 PMID:15520400 More... NCBI chr 4:46,756,823...46,864,041
Ensembl chr 4:46,756,506...46,870,821
JBrowse link
G Mif macrophage migration inhibitory factor severity ISO DNA:repeats:promoter RGD PMID:16179637 RGD:4891053 NCBI chr20:12,767,138...12,791,222
Ensembl chr 4:134,041,774...134,042,121
Ensembl chr20:134,041,774...134,042,121
JBrowse link
G Mir155 microRNA 155 ISO miRNA:increased expression:serum RGD PMID:27689251 RGD:25671378 NCBI chr11:37,261,114...37,261,178
Ensembl chr11:37,261,114...37,261,178
JBrowse link
G Mmp9 matrix metallopeptidase 9 ISO protein:increased expression:bronchoalveolar lavage fluid
protein:increased expression:serum
RGD PMID:17526676 PMID:25545245 RGD:5130723, RGD:13204794 NCBI chr 3:174,103,474...174,111,434
Ensembl chr 3:174,084,123...174,111,442
JBrowse link
G Mpo myeloperoxidase severity ISO DNA:polymorphism:promoter:-463G>A (human) RGD PMID:20954832 PMID:16883063 RGD:5130986, RGD:5130968 NCBI chr10:73,092,124...73,102,057
Ensembl chr10:73,092,400...73,102,056
JBrowse link
G Muc1 mucin 1, cell surface associated ISO protein:increased expression:serum (human) RGD PMID:19960788 RGD:5131272 NCBI chr 2:176,933,312...176,938,497
Ensembl chr 2:176,933,047...176,938,491
JBrowse link
G Muc2 mucin 2, oligomeric mucus/gel-forming ISO mRNA:increased expression:nasal mucosa (human) RGD PMID:9155717 RGD:5131426 NCBI chr 1:206,225,775...206,261,280
Ensembl chr 1:206,229,035...206,261,280
JBrowse link
G Muc5ac mucin 5AC, oligomeric mucus/gel-forming ISO RGD PMID:17255563 RGD:5131191 NCBI chr 1:206,293,717...206,326,006
Ensembl chr 1:206,293,869...206,326,006
JBrowse link
G Muc5b mucin 5B, oligomeric mucus/gel-forming ISO protein:altered glycosylation:saliva RGD PMID:17255563 PMID:11845304 RGD:5131191, RGD:5131194 NCBI chr 1:206,346,400...206,378,367
Ensembl chr 1:206,346,400...206,378,367
JBrowse link
G Muc6 mucin 6, oligomeric mucus/gel-forming ISO RGD PMID:20309575 RGD:7364748 NCBI chr 1:196,726,678...196,764,842
Ensembl chr 1:206,155,593...206,191,864
JBrowse link
G Ndufs1 NADH:ubiquinone oxidoreductase core subunit S1 ISO protein:increased oxidation:colonic epithelium, mitochondrion (mouse) RGD PMID:21518732 RGD:6484688 NCBI chr 9:72,040,286...72,073,605
Ensembl chr 9:72,040,090...72,073,605
JBrowse link
G Nos1 nitric oxide synthase 1 disease_progression ISO mRNA:decreased expression:lung
DNA:repeats:5'utr
RGD PMID:12064512 PMID:14760158 PMID:11890749 RGD:5132865, RGD:5132627, RGD:5132868 NCBI chr12:44,276,011...44,456,371
Ensembl chr12:44,287,614...44,371,837
JBrowse link
G Nos2 nitric oxide synthase 2 ISO mRNA,protein:decreased expression:respiratory mucosa RGD PMID:16517573 RGD:4891958 NCBI chr10:64,313,335...64,349,221
Ensembl chr10:64,313,335...64,401,880
JBrowse link
G Nos3 nitric oxide synthase 3 ISO DNA:polymorphism:exon: c. 894G>T (human) RGD PMID:12406848 RGD:4892049 NCBI chr 4:11,686,088...11,706,604
Ensembl chr 4:11,686,268...11,706,664
JBrowse link
G Pik3cg phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit gamma ISO ClinVar Annotator: match by term: Cystic fibrosis ClinVar PMID:25741868 NCBI chr 6:54,494,247...54,529,563
Ensembl chr 6:54,478,603...54,529,509
JBrowse link
G Plg plasminogen ISO ClinVar Annotator: match by term: Cystic fibrosis ClinVar PMID:9504411 PMID:17900274 PMID:18566672 PMID:28117099 NCBI chr 1:50,872,927...50,915,406
Ensembl chr 1:50,872,926...50,917,320
JBrowse link
G Ppara peroxisome proliferator activated receptor alpha ISO mRNA, protein:decreased expression, decreased activity:peripheral blood lymphocytes (human) RGD PMID:16875506 RGD:5683626 NCBI chr 7:118,712,261...118,780,723
Ensembl chr 7:118,712,412...118,780,714
JBrowse link
G Prss1 serine protease 1 IEP protein:increased expression:plasma RGD PMID:8625754 RGD:1599967 NCBI chr 4:70,364,589...70,367,792
Ensembl chr 4:71,331,246...71,334,452
JBrowse link
G Ptgdr2 prostaglandin D2 receptor 2 ISO RGD PMID:18334635 RGD:5135022 NCBI chr 1:207,585,088...207,590,275
Ensembl chr 1:216,995,629...217,022,393
JBrowse link
G Ptgs2 prostaglandin-endoperoxide synthase 2 ISO DNA:SNPs: :-765G>C and 8473T>C (human)
protein:increased expression:nasal mucosa
RGD PMID:20720307 PMID:18711055 RGD:5135298, RGD:5135523 NCBI chr13:64,714,063...64,722,320
Ensembl chr13:64,713,619...64,722,320
JBrowse link
G Ptx3 pentraxin 3 susceptibility ISO DNA:SNP:exon:rs35948036(human) RGD PMID:20927127 RGD:35673347 NCBI chr 2:152,797,563...152,803,372
Ensembl chr 2:152,781,955...152,803,372
JBrowse link
G RT1-M3-1 RT1 class Ib, locus M3, gene 1 ISO mRNA:decreased expression::decreased clearance of pathogens? RGD PMID:20044437 RGD:5144066 NCBI chr20:1,329,227...1,333,394
Ensembl chr20:1,329,225...1,333,366
JBrowse link
G Scnn1a sodium channel epithelial 1 subunit alpha ISO CTD Direct Evidence: marker/mechanism CTD PMID:15077107 PMID:19462466 NCBI chr 4:159,809,187...159,832,409
Ensembl chr 4:159,809,170...159,832,405
JBrowse link
G Scnn1b sodium channel epithelial 1 subunit beta ISO
ISS
CTD Direct Evidence: marker/mechanism
OMIM:219700
CTD
MouseDO
PMID:16207733 PMID:16463024 NCBI chr 1:185,861,326...185,915,717
Ensembl chr 1:185,854,733...185,916,049
JBrowse link
G Scnn1g sodium channel epithelial 1 subunit gamma ISO CTD Direct Evidence: marker/mechanism CTD PMID:16463024 NCBI chr 1:185,736,225...185,770,099
Ensembl chr 1:185,736,191...185,770,097
JBrowse link
G Serpina1 serpin family A member 1 ISO ClinVar Annotator: match by term: Mucoviscidosis ClinVar PMID:301355 PMID:1087161 PMID:1889260 PMID:2567291 PMID:3257660 More... NCBI chr 6:128,631,101...128,653,125
Ensembl chr 6:128,619,382...128,660,703
JBrowse link
G Serpina3n serpin family A member 3N severity ISO RGD PMID:11120905 RGD:5147439 NCBI chr 6:129,088,392...129,095,950
Ensembl chr 6:129,088,398...129,097,415
JBrowse link
G Sftpa1 surfactant protein A1 ISO protein:decreased expression:lung RGD PMID:15271694 RGD:4143403 NCBI chr16:17,042,264...17,045,770
Ensembl chr16:17,042,255...17,045,769
JBrowse link
G Sftpb surfactant protein B ISO mRNA:increased expression:respiratory system mucosa RGD PMID:17507829 RGD:4143381 NCBI chr 4:105,917,495...105,926,631
Ensembl chr 4:105,917,578...105,927,646
JBrowse link
G Sftpc surfactant protein C ISO protein:increased expression:lung RGD PMID:15271694 RGD:4143403 NCBI chr15:52,006,274...52,009,324
Ensembl chr15:52,006,283...52,009,475
JBrowse link
G Sftpd surfactant protein D ISO protein:decreased expression, altered degradation:lung RGD PMID:18211966 RGD:4143502 NCBI chr16:17,080,575...17,093,047
Ensembl chr16:17,080,567...17,094,036
JBrowse link
G Slc11a1 solute carrier family 11 member 1 ISO ClinVar Annotator: match by term: Cystic fibrosis ClinVar PMID:16395392 PMID:25741868 NCBI chr 9:83,406,327...83,417,252
Ensembl chr 9:83,406,427...83,417,238
JBrowse link
G St7 suppression of tumorigenicity 7 ISO ClinVar Annotator: match by term: Cystic fibrosis ClinVar PMID:1695717 PMID:7691345 PMID:9725922 PMID:11781704 PMID:15520400 More... NCBI chr 4:46,041,655...46,289,745
Ensembl chr 4:47,008,095...47,255,637
JBrowse link
G Tgfb1 transforming growth factor, beta 1 ISO protein:increased expression:lung
CTD Direct Evidence: marker/mechanism
ClinVar Annotator: match by term: Cystic fibrosis | ClinVar Annotator: match by term: MUCOVISCIDOSIS
CTD
ClinVar
OMIM
RGD
PMID:16207846 PMID:17293864 PMID:18292811 PMID:18424453 PMID:25741868 More... RGD:4145125 NCBI chr 1:90,324,312...90,340,627
Ensembl chr 1:90,324,046...90,340,899
JBrowse link
G Timp1 TIMP metallopeptidase inhibitor 1 ISO protein:increased expression:serum RGD PMID:25545245 RGD:13204794 NCBI chr  X:3,766,509...3,772,578
Ensembl chr  X:3,766,510...3,771,135
JBrowse link
G Tlr4 toll-like receptor 4 severity ISO protein:increased expression:monocyte RGD PMID:20717938 PMID:20522639 RGD:4144105, RGD:4144179 NCBI chr 5:85,161,247...85,174,882
Ensembl chr 5:85,161,192...85,175,007
JBrowse link
G Tlr5 toll-like receptor 5 resistance ISO protein:increased expression:lung, sputum, neutrophil (human)
DNA:snp:cds:c.1174C>T rs5744168 (human)
RGD PMID:18684966 PMID:21068401 RGD:5129506, RGD:5129499 NCBI chr13:97,166,430...97,190,642
Ensembl chr13:97,166,405...97,192,525
JBrowse link
G Tlr9 toll-like receptor 9 ISO DNA:snps:multiple (human) RGD PMID:20837493 RGD:5130208 NCBI chr 8:115,743,407...115,747,523
Ensembl chr 8:115,742,889...115,750,148
JBrowse link
G Tnf tumor necrosis factor severity ISO protein:increased expression:sputum
DNA:polymorphism, haplotype:promoter:−308G>A (rs1800629) (human)
RGD PMID:7537567 PMID:21993476 RGD:4142846, RGD:6767553 NCBI chr20:3,626,685...3,629,303
Ensembl chr20:3,626,532...3,629,303
JBrowse link
G Tnfrsf1a TNF receptor superfamily member 1A ISO CTD Direct Evidence: marker/mechanism CTD PMID:16463024 NCBI chr 4:159,837,119...159,849,817
Ensembl chr 4:159,837,032...159,849,816
JBrowse link
G Tsc2 TSC complex subunit 2 ISO ClinVar Annotator: match by term: Cystic fibrosis ClinVar PMID:25741868 NCBI chr10:14,125,679...14,160,317
Ensembl chr10:14,125,680...14,160,600
JBrowse link
G Wnt2 Wnt family member 2 ISO ClinVar Annotator: match by term: Cystic fibrosis ClinVar PMID:1695717 PMID:7691345 PMID:9725922 PMID:11781704 PMID:15520400 More... NCBI chr 4:47,294,300...47,340,284
Ensembl chr 4:47,294,300...47,421,976
JBrowse link
duodenal gastrinoma term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Men1 menin 1 ISO associated with Neuroendocrine Tumors; DNA:loss of heterozygosity: : RGD PMID:17135306 RGD:2317341 NCBI chr 1:213,068,166...213,074,132
Ensembl chr 1:213,068,166...213,074,120
JBrowse link
exocrine pancreatic insufficiency term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cela3b chymotrypsin like elastase 3B ISO CTD Direct Evidence: marker/mechanism CTD PMID:14687815 NCBI chr 5:149,628,773...149,636,937
Ensembl chr 5:154,912,170...154,920,333
JBrowse link
G Cftr CF transmembrane conductance regulator onset ISO associated with cystic fibrosis; DNA:mutation:exon:p.R347P (human)
DNA:insertion:exon:c.3904_3905insT (human)
RGD PMID:8535440 PMID:9254853 RGD:4140448, RGD:4140401 NCBI chr 4:47,422,084...47,694,646
Ensembl chr 4:47,526,735...47,694,643
JBrowse link
G Mtor mechanistic target of rapamycin kinase ISO CTD Direct Evidence: marker/mechanism CTD PMID:29384525 NCBI chr 5:164,167,985...164,277,438
Ensembl chr 5:164,167,928...164,277,435
JBrowse link
G Si sucrase-isomaltase IEP RGD PMID:3114740 RGD:597538474 NCBI chr 2:157,505,893...157,586,228
Ensembl chr 2:159,804,568...159,883,934
JBrowse link
Exocrine Pancreatic Insufficiency, Dyserythropoietic Anemia, and Calvarial Hyperostosis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cox4i2 cytochrome c oxidase subunit 4i2 ISO CTD Direct Evidence: marker/mechanism
ClinVar Annotator: match by term: COX4I2-related condition | ClinVar Annotator: match by term: Pancreatic insufficiency-anemia-hyperostosis syndrome
DNA:mutation:cds:c.412G>A (p.E138K)(human)
OMIM
CTD
ClinVar
RGD
PMID:19268275 PMID:25741868 PMID:28492532 PMID:19268275 RGD:11344905 NCBI chr 3:141,228,443...141,239,337
Ensembl chr 3:161,689,017...161,699,602
JBrowse link
Experimental Pancreatitis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Elane elastase, neutrophil expressed treatment IMP RGD PMID:18486906 RGD:10450567 NCBI chr 7:10,467,877...10,469,725
Ensembl chr 7:10,467,877...10,469,725
JBrowse link
G Fgf21 fibroblast growth factor 21 treatment ISO RGD PMID:19664632 PMID:19664632 RGD:10401870, RGD:10401870 NCBI chr 1:105,219,825...105,221,376
Ensembl chr 1:105,219,825...105,232,056
JBrowse link
G Ikbkg inhibitor of nuclear factor kappa B kinase regulatory subunit gamma treatment IDA RGD PMID:19195057 RGD:12791282 NCBI chr  X:157,358,279...157,397,563
Ensembl chr  X:157,367,639...157,392,757
JBrowse link
G Reg3b regenerating family member 3 beta IEP protein:increased expression:pancreatic juice (rat) RGD PMID:7809015 RGD:9999210 NCBI chr 4:112,419,776...112,423,014
Ensembl chr 4:112,419,776...112,423,014
JBrowse link
G Tbxa2r thromboxane A2 receptor treatment IMP RGD PMID:11341608 RGD:11059600 NCBI chr 7:9,034,077...9,041,489
Ensembl chr 7:9,034,108...9,038,905
JBrowse link
familial hyperinsulinemic hypoglycemia 1 term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abcc8 ATP binding cassette subfamily C member 8 ISO ClinVar Annotator: match by term: Congenital isolated hyperinsulinism | ClinVar Annotator: match by term: Hyperinsulinemic hypoglycemia, familial, 1 OMIM
ClinVar
PMID:1021286 PMID:2198959 PMID:3202066 PMID:7716548 PMID:7908292 More... NCBI chr 1:105,734,992...105,816,272
Ensembl chr 1:105,734,992...105,815,982
JBrowse link
G Andpro androgen regulated protein ISO ClinVar Annotator: match by term: Hyperinsulinemic hypoglycemia, familial, 1 ClinVar PMID:38605124 NCBI chr 3:157,171,739...157,178,262
Ensembl chr 3:157,171,740...157,178,104
JBrowse link
G Banf2 BANF family member 2 ISO ClinVar Annotator: match by term: Hyperinsulinemic hypoglycemia, familial, 1 ClinVar PMID:38605124 NCBI chr 3:131,387,107...131,442,837
Ensembl chr 3:151,853,911...151,896,204
JBrowse link
G Bfsp1 beaded filament structural protein 1 ISO ClinVar Annotator: match by term: Hyperinsulinemic hypoglycemia, familial, 1 ClinVar PMID:38605124 NCBI chr 3:131,195,087...131,252,668
Ensembl chr 3:151,648,588...151,682,837
JBrowse link
G Cd93 CD93 molecule ISO ClinVar Annotator: match by term: Hyperinsulinemic hypoglycemia, familial, 1 ClinVar PMID:38605124 NCBI chr 3:156,345,019...156,351,537
Ensembl chr 3:156,345,019...156,351,537
JBrowse link
G Cfap61 cilia and flagella associated protein 61 ISO ClinVar Annotator: match by term: Hyperinsulinemic hypoglycemia, familial, 1 ClinVar PMID:38605124 NCBI chr 3:133,354,400...133,633,310
Ensembl chr 3:153,807,735...154,086,590
JBrowse link
G Crnkl1 crooked neck pre-mRNA splicing factor 1 ISO ClinVar Annotator: match by term: Hyperinsulinemic hypoglycemia, familial, 1 ClinVar PMID:38605124 NCBI chr 3:153,764,718...153,807,973
Ensembl chr 6:6,894,292...6,896,635
Ensembl chr 3:6,894,292...6,896,635
JBrowse link
G Cst11 cystatin 11 ISO ClinVar Annotator: match by term: Hyperinsulinemic hypoglycemia, familial, 1 ClinVar PMID:38605124 NCBI chr 3:156,664,551...156,667,275
Ensembl chr 3:156,664,551...156,667,275
JBrowse link
G Cst3 cystatin C ISO ClinVar Annotator: match by term: Hyperinsulinemic hypoglycemia, familial, 1 ClinVar PMID:38605124 NCBI chr 3:156,790,061...156,794,116
Ensembl chr 3:156,790,079...156,793,937
JBrowse link
G Cst5 cystatin D ISO ClinVar Annotator: match by term: Hyperinsulinemic hypoglycemia, familial, 1 ClinVar PMID:38605124 NCBI chr 3:158,033,791...158,038,345
Ensembl chr 3:158,033,791...158,038,345
JBrowse link
G Cst8 cystatin 8 ISO ClinVar Annotator: match by term: Hyperinsulinemic hypoglycemia, familial, 1 ClinVar PMID:38605124 NCBI chr 3:136,244,586...136,255,412
Ensembl chr 3:156,697,767...156,724,636
JBrowse link
G Cst9l cystatin 9-like ISO ClinVar Annotator: match by term: Hyperinsulinemic hypoglycemia, familial, 1 ClinVar PMID:38605124 NCBI chr 3:156,741,232...156,744,045
Ensembl chr 3:156,741,232...156,744,045
JBrowse link
G Cstl1 cystatin-like 1 ISO ClinVar Annotator: match by term: Hyperinsulinemic hypoglycemia, familial, 1 ClinVar PMID:38605124 NCBI chr 3:136,199,914...136,204,912
Ensembl chr 3:156,653,052...156,658,049
JBrowse link
G Dstn destrin, actin depolymerizing factor ISO ClinVar Annotator: match by term: Hyperinsulinemic hypoglycemia, familial, 1 ClinVar PMID:38605124 NCBI chr 3:131,284,647...131,311,361
Ensembl chr 3:151,737,849...151,764,769
JBrowse link
G Dtd1 D-aminoacyl-tRNA deacylase 1 ISO ClinVar Annotator: match by term: Hyperinsulinemic hypoglycemia, familial, 1 ClinVar PMID:38605124 NCBI chr 3:131,995,870...132,158,646
Ensembl chr 3:152,452,620...152,486,304
JBrowse link
G Dzank1 double zinc ribbon and ankyrin repeat domains 1 ISO ClinVar Annotator: match by term: Hyperinsulinemic hypoglycemia, familial, 1 ClinVar PMID:38605124 NCBI chr 3:152,309,228...152,361,548
Ensembl chr 3:152,309,228...152,361,548
JBrowse link
G Foxa2 forkhead box A2 ISO ClinVar Annotator: match by term: Hyperinsulinemic hypoglycemia, familial, 1 ClinVar PMID:38605124 NCBI chr 3:155,923,305...155,927,508
Ensembl chr 3:155,923,307...155,928,757
JBrowse link
G Gzf1 GDNF-inducible zinc finger protein 1 ISO ClinVar Annotator: match by term: Hyperinsulinemic hypoglycemia, familial, 1 ClinVar PMID:38605124 NCBI chr 3:136,119,004...136,131,223
Ensembl chr 3:156,572,250...156,584,363
JBrowse link
G Hadh hydroxyacyl-CoA dehydrogenase ISO ClinVar Annotator: match by term: Hyperinsulinemic hypoglycemia, familial, 1 ClinVar PMID:25741868 PMID:28492532 PMID:29280746 PMID:34055426 PMID:34547194 NCBI chr 2:222,462,049...222,504,446
Ensembl chr 2:222,462,049...222,504,446
JBrowse link
G Insm1 INSM transcriptional repressor 1 ISO ClinVar Annotator: match by term: Hyperinsulinemic hypoglycemia, familial, 1 ClinVar PMID:38605124 NCBI chr 3:154,093,310...154,096,243
Ensembl chr 3:154,092,734...154,096,047
JBrowse link
G Kat14 lysine acetyltransferase 14 ISO ClinVar Annotator: match by term: Hyperinsulinemic hypoglycemia, familial, 1 ClinVar PMID:38605124 NCBI chr 3:152,194,560...152,235,048
Ensembl chr 3:152,194,696...152,235,052
JBrowse link
G Kcnj11 potassium inwardly-rectifying channel, subfamily J, member 11 ISO ClinVar Annotator: match by term: Hyperinsulinemic hypoglycemia, familial, 1 ClinVar PMID:15580558 PMID:15718250 PMID:16885549 PMID:17466004 PMID:18414213 More... NCBI chr 1:105,727,473...105,731,167
Ensembl chr 1:105,727,570...105,731,169
JBrowse link
G Kif16b kinesin family member 16B ISO ClinVar Annotator: match by term: Hyperinsulinemic hypoglycemia, familial, 1 ClinVar PMID:38605124 NCBI chr 3:150,428,233...150,707,755
Ensembl chr 3:150,366,838...150,707,770
JBrowse link
G Kiz kizuna centrosomal protein ISO ClinVar Annotator: match by term: Hyperinsulinemic hypoglycemia, familial, 1 ClinVar PMID:38605124 NCBI chr 3:134,277,631...134,385,260
Ensembl chr 3:154,730,634...154,838,410
JBrowse link
G Mgme1 mitochondrial genome maintenance exonuclease 1 ISO ClinVar Annotator: match by term: Hyperinsulinemic hypoglycemia, familial, 1 ClinVar PMID:38605124 NCBI chr 3:152,094,514...152,103,314
Ensembl chr 3:152,094,658...152,103,313
JBrowse link
G Naa20 N(alpha)-acetyltransferase 20, NatB catalytic subunit ISO ClinVar Annotator: match by term: Hyperinsulinemic hypoglycemia, familial, 1 ClinVar PMID:38605124 NCBI chr 3:133,322,036...133,336,843
Ensembl chr 3:153,775,338...153,790,916
JBrowse link
G Napb NSF attachment protein beta ISO ClinVar Annotator: match by term: Hyperinsulinemic hypoglycemia, familial, 1 ClinVar PMID:38605124 NCBI chr 3:156,585,394...156,632,418
Ensembl chr 3:156,585,394...156,632,418
JBrowse link
G Nkx2-2 NK2 homeobox 2 ISO ClinVar Annotator: match by term: Hyperinsulinemic hypoglycemia, familial, 1 ClinVar PMID:38605124 NCBI chr 3:134,619,701...134,630,282
Ensembl chr 3:155,073,250...155,083,249
JBrowse link
G Nkx2-4 NK2 homeobox 4 ISO ClinVar Annotator: match by term: Hyperinsulinemic hypoglycemia, familial, 1 ClinVar PMID:38605124 NCBI chr 3:134,514,368...134,517,243
Ensembl chr 3:154,967,598...154,969,917
JBrowse link
G Nxt1 nuclear transport factor 2-like export factor 1 ISO ClinVar Annotator: match by term: Hyperinsulinemic hypoglycemia, familial, 1 ClinVar PMID:38605124 NCBI chr 3:156,562,121...156,565,043
Ensembl chr 3:156,560,556...156,565,996
JBrowse link
G Otor otoraplin ISO ClinVar Annotator: match by term: Hyperinsulinemic hypoglycemia, familial, 1 ClinVar PMID:38605124 NCBI chr 3:130,415,339...130,418,601
Ensembl chr 3:150,868,886...150,872,141
JBrowse link
G Ovol2 ovo-like zinc finger 2 ISO ClinVar Annotator: match by term: Hyperinsulinemic hypoglycemia, familial, 1 ClinVar PMID:38605124 NCBI chr 3:152,130,767...152,160,487
Ensembl chr 3:152,130,767...152,160,487
JBrowse link
G Pax1 paired box 1 ISO ClinVar Annotator: match by term: Hyperinsulinemic hypoglycemia, familial, 1 ClinVar PMID:38605124 NCBI chr 3:134,792,330...134,801,637
Ensembl chr 3:155,245,529...155,254,836
JBrowse link
G Pcsk2 proprotein convertase subtilisin/kexin type 2 ISO ClinVar Annotator: match by term: Hyperinsulinemic hypoglycemia, familial, 1 ClinVar PMID:38605124 NCBI chr 3:151,333,938...151,636,628
Ensembl chr 3:151,333,234...151,638,849
JBrowse link
G Pet117 PET117 cytochrome c oxidase chaperone ISO ClinVar Annotator: match by term: Hyperinsulinemic hypoglycemia, familial, 1 ClinVar PMID:38605124 Ensembl chr 3:152,189,892...152,194,868 JBrowse link
G Polr3f RNA polymerase III subunit F ISO ClinVar Annotator: match by term: Hyperinsulinemic hypoglycemia, familial, 1 ClinVar PMID:38605124 NCBI chr 3:152,361,798...152,378,169
Ensembl chr 3:152,361,798...152,378,168
JBrowse link
G Ralgapa2 Ral GTPase activating protein catalytic subunit alpha 2 ISO ClinVar Annotator: match by term: Hyperinsulinemic hypoglycemia, familial, 1 ClinVar PMID:38605124 NCBI chr 3:133,658,725...133,938,821
Ensembl chr 3:154,112,014...154,392,138
JBrowse link
G Rbbp9 RB binding protein 9, serine hydrolase ISO ClinVar Annotator: match by term: Hyperinsulinemic hypoglycemia, familial, 1 ClinVar PMID:38605124 NCBI chr 3:152,378,426...152,392,370
Ensembl chr 3:152,378,699...152,385,489
JBrowse link
G Rin2 Ras and Rab interactor 2 ISO ClinVar Annotator: match by term: Hyperinsulinemic hypoglycemia, familial, 1 ClinVar PMID:38605124 NCBI chr 3:133,086,858...133,303,604
Ensembl chr 3:153,540,214...153,756,897
JBrowse link
G Rrbp1 ribosome binding protein 1 ISO ClinVar Annotator: match by term: Hyperinsulinemic hypoglycemia, familial, 1 ClinVar PMID:38605124 NCBI chr 3:151,768,386...151,830,255
Ensembl chr 3:151,768,386...151,830,255
JBrowse link
G Scp2d1 SCP2 sterol-binding domain containing 1 ISO ClinVar Annotator: match by term: Hyperinsulinemic hypoglycemia, familial, 1 ClinVar PMID:38605124 NCBI chr 3:132,201,979...132,202,729
Ensembl chr 3:152,627,292...152,757,474
JBrowse link
G Sec23b Sec23 homolog B, COPII coat complex component ISO ClinVar Annotator: match by term: Hyperinsulinemic hypoglycemia, familial, 1 ClinVar PMID:38605124 NCBI chr 3:152,392,340...152,434,813
Ensembl chr 3:152,392,308...152,434,800
JBrowse link
G Slc24a3 solute carrier family 24 member 3 ISO ClinVar Annotator: match by term: Hyperinsulinemic hypoglycemia, familial, 1 ClinVar PMID:38605124 NCBI chr 3:153,005,418...153,504,497
Ensembl chr 3:153,004,987...153,504,497
JBrowse link
G Snrpb2 small nuclear ribonucleoprotein polypeptide B2 ISO ClinVar Annotator: match by term: Hyperinsulinemic hypoglycemia, familial, 1 ClinVar PMID:38605124 NCBI chr 3:150,852,814...150,862,364
Ensembl chr 3:150,852,790...150,863,428
JBrowse link
G Snx5 sorting nexin 5 ISO ClinVar Annotator: match by term: Hyperinsulinemic hypoglycemia, familial, 1 ClinVar PMID:38605124 NCBI chr 3:131,621,875...131,641,127
Ensembl chr 3:152,075,258...152,094,877
JBrowse link
G Sstr4 somatostatin receptor 4 ISO ClinVar Annotator: match by term: Hyperinsulinemic hypoglycemia, familial, 1 ClinVar PMID:38605124 NCBI chr 3:156,307,992...156,309,855
Ensembl chr 3:156,307,093...156,550,348
JBrowse link
G Thbd thrombomodulin ISO ClinVar Annotator: match by term: Hyperinsulinemic hypoglycemia, familial, 1 ClinVar PMID:38605124 NCBI chr 3:156,316,526...156,320,178
Ensembl chr 3:156,306,632...156,320,582
JBrowse link
G Xrn2 5'-3' exoribonuclease 2 ISO ClinVar Annotator: match by term: Hyperinsulinemic hypoglycemia, familial, 1 ClinVar PMID:38605124 NCBI chr 3:154,888,558...154,962,519
Ensembl chr 3:154,890,061...154,962,486
JBrowse link
G Zfp133 zinc finger protein 133 ISO ClinVar Annotator: match by term: Hyperinsulinemic hypoglycemia, familial, 1 ClinVar PMID:38605124 NCBI chr 3:131,829,404...131,847,552
Ensembl chr 3:152,282,735...152,300,889
JBrowse link
familial hyperinsulinemic hypoglycemia 2 term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abcc8 ATP binding cassette subfamily C member 8 ISO ClinVar Annotator: match by term: Hyperinsulinemic hypoglycemia, familial, 2 ClinVar PMID:9867219 PMID:11318841 PMID:11692183 PMID:11872696 PMID:12196481 More... NCBI chr 1:105,734,992...105,816,272
Ensembl chr 1:105,734,992...105,815,982
JBrowse link
G Kcnj11 potassium inwardly-rectifying channel, subfamily J, member 11 ISO ClinVar Annotator: match by term: Hyperinsulinemic hypoglycemia, familial, 2 OMIM
ClinVar
PMID:7847376 PMID:8897013 PMID:8923010 PMID:9356020 PMID:9867219 More... NCBI chr 1:105,727,473...105,731,167
Ensembl chr 1:105,727,570...105,731,169
JBrowse link
familial hyperinsulinemic hypoglycemia 3 term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gck glucokinase ISO
ISS
ClinVar Annotator: match by term: Hyperinsulinism due to glucokinase deficiency
OMIM:602485
CTD Direct Evidence: marker/mechanism
OMIM
ClinVar
MouseDO
CTD
PMID:1502186 PMID:2555564 PMID:7553875 PMID:7555485 PMID:8068341 More... NCBI chr14:84,999,019...85,041,098
Ensembl chr14:84,999,020...85,040,949
JBrowse link
familial hyperinsulinemic hypoglycemia 4 term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hadh hydroxyacyl-CoA dehydrogenase ISO ClinVar Annotator: match by term: Hyperinsulinemic hypoglycemia, familial, 4 | ClinVar Annotator: match by term: Hyperinsulinism due to short chain 3-hydroxylacyl-CoA dehydrogenase deficiency
CTD Direct Evidence: marker/mechanism
ClinVar Annotator: match by term: Hyperinsulinemic hypoglycemia, familial, 4 | ClinVar Annotator: match by term: Hyperinsulinism due to glutamodehydrogenase deficiency
OMIM
ClinVar
CTD
PMID:904979 PMID:8825408 PMID:11489939 PMID:14693719 PMID:16725361 More... NCBI chr 2:222,462,049...222,504,446
Ensembl chr 2:222,462,049...222,504,446
JBrowse link
G Insr insulin receptor ISO ClinVar Annotator: match by term: Hyperinsulinemic hypoglycemia, familial, 4 | ClinVar Annotator: match by term: Hyperinsulinism due to glutamodehydrogenase deficiency ClinVar PMID:2002058 PMID:2211730 PMID:2365819 PMID:2983222 PMID:7042734 More... NCBI chr12:5,991,135...6,129,275
Ensembl chr12:5,981,835...6,128,803
JBrowse link
familial hyperinsulinemic hypoglycemia 5 term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Insr insulin receptor ISO ClinVar Annotator: match by term: Hyperinsulinism due to INSR deficiency
CTD Direct Evidence: marker/mechanism
OMIM
ClinVar
CTD
PMID:2002058 PMID:2170418 PMID:2211730 PMID:2365819 PMID:2983222 More... NCBI chr12:5,991,135...6,129,275
Ensembl chr12:5,981,835...6,128,803
JBrowse link
familial hyperinsulinemic hypoglycemia 6 term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Glud1 glutamate dehydrogenase 1 ISO ClinVar Annotator: match by term: GLUD1-related condition | ClinVar Annotator: match by term: Hyperinsulinism-hyperammonemia syndrome
CTD Direct Evidence: marker/mechanism
OMIM
ClinVar
CTD
PMID:9469993 PMID:9536098 PMID:9571225 PMID:9571255 PMID:9843361 More... NCBI chr16:9,646,569...9,680,215
Ensembl chr16:9,646,509...9,680,210
JBrowse link
G Shld2 shieldin complex subunit 2 ISO ClinVar Annotator: match by term: Hyperinsulinism-hyperammonemia syndrome ClinVar PMID:25741868 PMID:26467025 PMID:28492532 NCBI chr16:9,554,921...9,646,186
Ensembl chr16:9,553,854...9,588,510
JBrowse link
familial hyperinsulinemic hypoglycemia 7 term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Slc16a1 solute carrier family 16 member 1 ISO CTD Direct Evidence: marker/mechanism
ClinVar Annotator: match by term: Exercise-induced hyperinsulinism
OMIM
CTD
ClinVar
PMID:11207177 PMID:17701893 PMID:18414213 PMID:19881260 PMID:25371203 More... NCBI chr 2:194,805,556...194,832,966
Ensembl chr 2:194,812,502...194,832,977
JBrowse link
familial hyperinsulinemic hypoglycemia 8 term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Slc25a36 solute carrier family 25 member 36 ISO ClinVar Annotator: match by term: Hyperinsulinemic hypoglycemia, familial, 8 OMIM
ClinVar
PMID:34576089 PMID:34971397 PMID:36695547 NCBI chr 8:106,539,355...106,573,240 JBrowse link
Familial Pancreatic Carcinoma term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apoa4 apolipoprotein A4 ISO mRNA:increased expression:pancreas, carcinoma (human) RGD PMID:16815451 RGD:5685662 NCBI chr 8:55,435,779...55,438,160
Ensembl chr 8:55,434,168...55,438,164
JBrowse link
G Atm ATM serine/threonine kinase ISO ClinVar Annotator: match by term: Familial pancreatic carcinoma ClinVar PMID:8755918 PMID:9443866 PMID:9463314 PMID:9887333 PMID:10330348 More... NCBI chr 8:62,724,939...62,829,040
Ensembl chr 8:62,727,291...62,828,629
JBrowse link
G Bard1 BRCA1 associated RING domain 1 ISO ClinVar Annotator: match by term: Familial pancreatic carcinoma ClinVar PMID:25085752 PMID:25741868 PMID:26315354 PMID:26467025 PMID:26787654 More... NCBI chr 9:80,069,960...80,144,167
Ensembl chr 9:80,069,960...80,176,873
JBrowse link
G Brca1 BRCA1, DNA repair associated ISO ClinVar Annotator: match by term: Familial pancreatic carcinoma ClinVar PMID:14973102 PMID:16267036 PMID:18273839 PMID:18627636 PMID:19656415 More... NCBI chr10:86,917,693...86,978,012
Ensembl chr10:86,917,693...86,977,763
JBrowse link
G Brca2 BRCA2, DNA repair associated ISO ClinVar Annotator: match by term: Familial pancreatic carcinoma ClinVar PMID:9536098 PMID:11179017 PMID:11241844 PMID:11597388 PMID:12100744 More... NCBI chr12:4,895,092...4,939,340
Ensembl chr12:4,895,447...4,936,194
JBrowse link
G C8h11orf65 similar to human chromosome 11 open reading frame 65 ISO ClinVar Annotator: match by term: Familial pancreatic carcinoma ClinVar PMID:28492532 NCBI chr 8:62,692,123...62,720,951
Ensembl chr 8:62,692,568...62,720,946
JBrowse link
G Cdkn2a cyclin-dependent kinase inhibitor 2A ISO ClinVar Annotator: match by term: Familial pancreatic carcinoma ClinVar PMID:7640518 PMID:7647780 PMID:7987387 PMID:8668202 PMID:9823374 More... NCBI chr 5:109,100,763...109,114,448
Ensembl chr 5:109,100,772...109,119,248
JBrowse link
G Kras KRAS proto-oncogene, GTPase ISO ClinVar Annotator: match by term: Familial pancreatic carcinoma ClinVar PMID:1875403 PMID:2547513 PMID:3627975 PMID:7773929 PMID:8439212 More... NCBI chr 4:179,916,255...179,949,613
Ensembl chr 4:179,919,802...179,949,320
JBrowse link
G Nalf1 NALCN channel auxiliary factor 1 ISO ClinVar Annotator: match by term: Familial pancreatic carcinoma ClinVar PMID:25741868 NCBI chr16:86,415,540...86,938,150
Ensembl chr16:86,415,488...86,938,150
JBrowse link
G Palb2 partner and localizer of BRCA2 ISO ClinVar Annotator: match by term: Familial pancreatic carcinoma ClinVar PMID:17200668 PMID:17200671 PMID:17200672 PMID:17287723 PMID:18628482 More... NCBI chr 1:186,096,312...186,120,284
Ensembl chr 1:186,096,312...186,120,302
JBrowse link
G Smad4 SMAD family member 4 ISO ClinVar Annotator: match by term: Familial pancreatic carcinoma ClinVar PMID:25559809 PMID:25741868 PMID:26467025 PMID:26900293 PMID:27611364 More... NCBI chr18:69,518,988...69,549,684
Ensembl chr18:69,518,988...69,549,684
JBrowse link
G Stk11 serine/threonine kinase 11 ISO ClinVar Annotator: match by term: Familial pancreatic carcinoma ClinVar PMID:12552571 PMID:17404884 PMID:19340305 PMID:23555315 PMID:23893923 More... NCBI chr 7:10,225,204...10,241,965
Ensembl chr 7:10,225,204...10,241,965
JBrowse link
G Tp53 tumor protein p53 ISO ClinVar Annotator: match by term: Familial pancreatic carcinoma ClinVar PMID:1565143 PMID:1565144 PMID:1631137 PMID:1683921 PMID:1978757 More... NCBI chr10:54,798,871...54,810,300
Ensembl chr10:54,798,851...54,810,299
JBrowse link
gastrinoma term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Igf1r insulin-like growth factor 1 receptor ISO mRNA and protein: increased expression::poor prognosis for high expression RGD PMID:15867218 RGD:7242847 NCBI chr 1:130,959,787...131,248,664
Ensembl chr 1:130,959,997...131,248,664
JBrowse link
G Men1 menin 1 ISO DNA:mutations: :
CTD Direct Evidence: marker/mechanism
CTD
RGD
PMID:17961653 PMID:15944766 RGD:2317354 NCBI chr 1:213,068,166...213,074,132
Ensembl chr 1:213,068,166...213,074,120
JBrowse link
G Met MET proto-oncogene, receptor tyrosine kinase severity ISO associated with Zollinger-Ellison Syndrome; mRNA:increased expression:tumor (human) RGD PMID:12114431 RGD:2317605 NCBI chr 4:46,756,823...46,864,041
Ensembl chr 4:46,756,506...46,870,821
JBrowse link
G Mgmt O-6-methylguanine-DNA methyltransferase ISO DNA:hypomethylation:promoter (human) RGD PMID:17278096 RGD:2317340 NCBI chr 1:201,140,832...201,367,481
Ensembl chr 1:201,140,661...201,367,482
JBrowse link
G Slc2a2 solute carrier family 2 member 2 ISO mRNA:decreased expression:pancreatic islet RGD PMID:12114701 PMID:8421107 RGD:2324976, RGD:2324977 NCBI chr 2:113,537,884...113,568,422
Ensembl chr 2:113,537,972...113,568,467
JBrowse link
Gastro-Enteropancreatic Neuroendocrine Tumor term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atm ATM serine/threonine kinase disease_progression ISO associated with Neoplasm Metastasis;mRNA, protein: decreased expression:gastrointestinal system, multiple (human) RGD PMID:22485171 RGD:150340716 NCBI chr 8:62,724,939...62,829,040
Ensembl chr 8:62,727,291...62,828,629
JBrowse link
G Atrx ATRX, chromatin remodeler severity ISO RGD PMID:26026117 RGD:127285385 NCBI chr  X:74,916,548...75,062,880
Ensembl chr  X:74,916,548...75,062,880
JBrowse link
G Cd53 Cd53 molecule ISO CTD Direct Evidence: marker/mechanism CTD PMID:29915428 NCBI chr 2:194,352,139...194,399,668
Ensembl chr 2:197,040,369...197,218,593
JBrowse link
G Cd86 CD86 molecule ISO CTD Direct Evidence: marker/mechanism CTD PMID:29915428 NCBI chr11:77,647,565...77,706,178
Ensembl chr11:77,647,600...77,725,361
JBrowse link
G Ciita class II, major histocompatibility complex, transactivator ISO CTD Direct Evidence: marker/mechanism CTD PMID:29915428 NCBI chr10:5,646,854...5,694,393
Ensembl chr10:5,647,085...5,694,342
JBrowse link
G Cxcr4 C-X-C motif chemokine receptor 4 severity ISO protein:increased expression:colon (human) RGD PMID:26259237 RGD:11530617 NCBI chr13:42,630,383...42,634,288
Ensembl chr13:42,630,104...42,634,459
JBrowse link
G Daxx death-domain associated protein severity ISO RGD PMID:26026117 RGD:127285385 NCBI chr20:4,971,973...4,978,062
Ensembl chr20:4,971,941...4,977,720
JBrowse link
G Eomes eomesodermin ISO CTD Direct Evidence: marker/mechanism CTD PMID:29915428 NCBI chr 8:127,059,215...127,067,070
Ensembl chr 8:127,059,215...127,067,070
JBrowse link
G Gata3 GATA binding protein 3 ISO CTD Direct Evidence: marker/mechanism CTD PMID:29915428 NCBI chr17:73,544,234...73,575,670
Ensembl chr17:73,553,548...73,575,670
JBrowse link
G Gfi1 growth factor independent 1 transcriptional repressor ISO CTD Direct Evidence: marker/mechanism CTD PMID:29915428 NCBI chr14:2,185,489...2,204,191
Ensembl chr14:2,187,286...2,196,730
JBrowse link
G Ikzf1 IKAROS family zinc finger 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:29915428 NCBI chr14:90,468,696...90,556,522
Ensembl chr14:90,469,172...90,557,574
JBrowse link
G Ikzf3 IKAROS family zinc finger 3 ISO CTD Direct Evidence: marker/mechanism CTD PMID:29915428 NCBI chr10:83,956,850...84,049,861
Ensembl chr10:83,962,030...84,049,861
JBrowse link
G Il10 interleukin 10 ISO CTD Direct Evidence: marker/mechanism CTD PMID:29915428 NCBI chr13:45,024,921...45,029,586
Ensembl chr13:45,025,087...45,029,580
JBrowse link
G Il2rb interleukin 2 receptor subunit beta ISO CTD Direct Evidence: marker/mechanism CTD PMID:29915428 NCBI chr 7:111,913,828...111,928,537
Ensembl chr 7:111,913,828...111,928,537
JBrowse link
G Notch2 notch receptor 2 ISO CTD Direct Evidence: marker/mechanism CTD PMID:29915428 NCBI chr 2:188,299,336...188,432,823
Ensembl chr 2:188,299,336...188,432,823
JBrowse link
G Pou2f2 POU class 2 homeobox 2 ISO CTD Direct Evidence: marker/mechanism CTD PMID:29915428 NCBI chr 1:89,810,153...89,897,560
Ensembl chr 1:89,812,093...89,897,564
JBrowse link
G Ptprc protein tyrosine phosphatase, receptor type, C ISO CTD Direct Evidence: marker/mechanism CTD PMID:29915428 NCBI chr13:52,147,717...52,259,810
Ensembl chr13:52,147,717...52,259,746
JBrowse link
G Runx3 RUNX family transcription factor 3 ISO CTD Direct Evidence: marker/mechanism CTD PMID:29915428 NCBI chr 5:152,644,270...152,702,835
Ensembl chr 5:152,644,270...152,702,835
JBrowse link
G Serpina1 serpin family A member 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:29915428 NCBI chr 6:128,631,101...128,653,125
Ensembl chr 6:128,619,382...128,660,703
JBrowse link
Glucagonoma term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Btc betacellulin ISO protein:increased expression:pancreas RGD PMID:10724350 RGD:2326087 NCBI chr14:16,992,668...17,031,178
Ensembl chr14:16,992,193...17,033,078
JBrowse link
G Men1 menin 1 ISO DNA:deletion:exon
CTD Direct Evidence: marker/mechanism
CTD
RGD
PMID:17961653 PMID:20138042 RGD:2317288 NCBI chr 1:213,068,166...213,074,132
Ensembl chr 1:213,068,166...213,074,120
JBrowse link
G Slc2a2 solute carrier family 2 member 2 ISO mRNA:decreased expression:pancreatic islet RGD PMID:12114701 PMID:8421107 RGD:2324976, RGD:2324977 NCBI chr 2:113,537,884...113,568,422
Ensembl chr 2:113,537,972...113,568,467
JBrowse link
G Sstr4 somatostatin receptor 4 ISO RGD PMID:8132773 RGD:2324994 NCBI chr 3:156,307,992...156,309,855
Ensembl chr 3:156,307,093...156,550,348
JBrowse link
Hereditary Pancreatitis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Agmat agmatinase ISO ClinVar Annotator: match by term: Hereditary pancreatitis ClinVar PMID:23721890 PMID:28492532 NCBI chr 5:159,326,680...159,357,300
Ensembl chr 5:159,343,160...159,357,299
JBrowse link
G Casp9 caspase 9 ISO ClinVar Annotator: match by term: Hereditary pancreatitis ClinVar PMID:23721890 PMID:28492532 Ensembl chr 5:159,391,188...159,409,648 JBrowse link
G Cela2a chymotrypsin like elastase 2A ISO ClinVar Annotator: match by term: Hereditary pancreatitis ClinVar PMID:23721890 PMID:28492532 NCBI chr 5:154,126,879...154,136,630
Ensembl chr 5:159,409,899...159,426,208
JBrowse link
G Cftr CF transmembrane conductance regulator ISO ClinVar Annotator: match by term: Hereditary chronic pancreatitis | ClinVar Annotator: match by term: Hereditary pancreatitis | ClinVar Annotator: match by term: Pancreatitis, idiopathic, susceptibility to
CTD Direct Evidence: marker/mechanism
OMIM
ClinVar
CTD
PMID:754013 PMID:1282016 PMID:1283148 PMID:1283149 PMID:1283151 More... NCBI chr 4:47,422,084...47,694,646
Ensembl chr 4:47,526,735...47,694,643
JBrowse link
G Clec5a C-type lectin domain containing 5A ISO ClinVar Annotator: match by term: Hereditary pancreatitis ClinVar PMID:25741868 NCBI chr 4:70,373,855...70,383,560
Ensembl chr 4:70,374,529...70,398,230
JBrowse link
G Cpa1 carboxypeptidase A1 ISO ClinVar Annotator: match by term: Hereditary chronic pancreatitis | ClinVar Annotator: match by term: Hereditary pancreatitis ClinVar PMID:9536098 PMID:16199547 PMID:17576681 PMID:23955596 PMID:24522117 More... NCBI chr 4:59,257,417...59,263,544
Ensembl chr 4:60,224,801...60,230,928
JBrowse link
G Ctrc chymotrypsin C susceptibility ISO ClinVar Annotator: match by term: Hereditary chronic pancreatitis | ClinVar Annotator: match by term: Hereditary pancreatitis
CTD Direct Evidence: marker/mechanism
ClinVar
CTD
OMIM
PMID:190101 PMID:5256061 PMID:8168476 PMID:9536098 PMID:16199547 More... NCBI chr 5:154,147,314...154,156,540
Ensembl chr 5:159,430,335...159,439,545
JBrowse link
G Ddi2 DNA damage inducible 1 homolog 2 ISO ClinVar Annotator: match by term: Hereditary pancreatitis ClinVar PMID:23721890 PMID:28492532 NCBI chr 5:159,272,625...159,318,365
Ensembl chr 5:159,272,625...159,318,310
JBrowse link
G Dnajc16 DnaJ heat shock protein family (Hsp40) member C16 ISO ClinVar Annotator: match by term: Hereditary pancreatitis ClinVar PMID:23721890 PMID:28492532 NCBI chr 5:159,355,279...159,389,267
Ensembl chr 5:159,361,314...159,389,298
JBrowse link
G Ephb6 Eph receptor B6 ISO ClinVar Annotator: match by term: Hereditary pancreatitis ClinVar PMID:25741868 NCBI chr 4:70,491,973...70,507,230
Ensembl chr 4:71,458,971...71,476,659
JBrowse link
G Mgam maltase-glucoamylase ISO ClinVar Annotator: match by term: Hereditary pancreatitis ClinVar PMID:25741868 NCBI chr 4:69,441,626...69,602,068
Ensembl chr 4:70,408,263...70,568,752
JBrowse link
G Or9a4 olfactory receptor family 9 subfamily A member 4 ISO ClinVar Annotator: match by term: Hereditary pancreatitis ClinVar PMID:25741868 NCBI chr 4:69,401,606...69,402,550
Ensembl chr 4:70,368,300...70,369,244
JBrowse link
G Plekhm2 pleckstrin homology and RUN domain containing M2 ISO ClinVar Annotator: match by term: Hereditary pancreatitis ClinVar PMID:23721890 PMID:28492532 NCBI chr 5:159,222,620...159,261,666
Ensembl chr 5:159,223,300...159,261,642
JBrowse link
G Prss1 serine protease 1 ISO ClinVar Annotator: match by term: Hereditary chronic pancreatitis | ClinVar Annotator: match by term: Hereditary pancreatitis
ClinVar Annotator: match by term: Hereditary chronic pancreatitis | ClinVar Annotator: match by term: Hereditary pancreatitis | ClinVar Annotator: match by term: Pancreatitis, chronic, protection against
CTD Direct Evidence: marker/mechanism
OMIM
ClinVar
CTD
PMID:2539344 PMID:6023921 PMID:8841182 PMID:9322498 PMID:9536098 More... NCBI chr 4:70,364,589...70,367,792
Ensembl chr 4:71,331,246...71,334,452
JBrowse link
G Prss37 serine protease 37 ISO ClinVar Annotator: match by term: Hereditary pancreatitis ClinVar PMID:25741868 NCBI chr 4:70,289,678...70,301,259
Ensembl chr 4:70,289,678...70,302,122
JBrowse link
G Prss58 serine protease 58 ISO ClinVar Annotator: match by term: Hereditary pancreatitis ClinVar PMID:25741868 NCBI chr 4:69,752,646...69,757,306
Ensembl chr 4:70,719,326...70,723,647
JBrowse link
G Sar1b secretion associated, Ras related GTPase 1B ISO ClinVar Annotator: match by term: Hereditary pancreatitis ClinVar PMID:12692552 PMID:25741868 NCBI chr10:36,525,365...36,555,009
Ensembl chr10:36,519,384...36,555,005
JBrowse link
G Slc25a34 solute carrier family 25, member 34 ISO ClinVar Annotator: match by term: Hereditary pancreatitis ClinVar PMID:23721890 PMID:28492532 NCBI chr 5:159,215,120...159,219,892
Ensembl chr 5:159,215,120...159,219,892
JBrowse link
G Spink1 serine peptidase inhibitor, Kazal type 1 ISO CTD Direct Evidence: marker/mechanism
ClinVar Annotator: match by term: Hereditary chronic pancreatitis | ClinVar Annotator: match by term: Hereditary pancreatitis
CTD
ClinVar
OMIM
PMID:120111 PMID:1613792 PMID:1870127 PMID:3501289 PMID:9536098 More... NCBI chr18:36,121,626...36,133,596
Ensembl chr18:36,076,399...36,133,545
JBrowse link
G Ssbp1 single stranded DNA binding protein 1 ISO ClinVar Annotator: match by term: Hereditary pancreatitis ClinVar PMID:25741868 NCBI chr 4:70,232,740...70,242,824
Ensembl chr 4:70,232,794...70,243,700
JBrowse link
G Tas2r108 taste receptor, type 2, member 108 ISO ClinVar Annotator: match by term: Hereditary pancreatitis ClinVar PMID:25741868 NCBI chr 4:69,287,667...69,288,581
Ensembl chr 4:70,254,367...70,255,281
JBrowse link
G Tas2r137 taste receptor, type 2, member 137 ISO ClinVar Annotator: match by term: Hereditary pancreatitis ClinVar PMID:25741868 NCBI chr 4:69,279,276...69,286,935
Ensembl chr 4:70,251,091...70,252,041
JBrowse link
G Tas2r138 taste receptor, type 2, member 138 ISO ClinVar Annotator: match by term: Hereditary pancreatitis ClinVar PMID:25741868 NCBI chr 4:69,428,344...69,429,339 JBrowse link
G Trpv6 transient receptor potential cation channel, subfamily V, member 6 ISO ClinVar Annotator: match by term: Hereditary pancreatitis ClinVar PMID:25741868 NCBI chr 4:71,474,006...71,489,667
Ensembl chr 4:71,474,007...71,489,671
JBrowse link
HMG-CoA synthase 2 deficiency term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hmgcs2 3-hydroxy-3-methylglutaryl-CoA synthase 2 ISO
ISS
ClinVar Annotator: match by term: HMG-CoA synthase-2 deficiency | ClinVar Annotator: match by term: HMGCS2-related condition | ClinVar Annotator: match by term: MITOCHONDRIAL HMG-CoA SYNTHASE DEFICIENCY
OMIM:605911
CTD Direct Evidence: marker/mechanism
OMIM
ClinVar
MouseDO
CTD
PMID:9337379 PMID:9536098 PMID:9727719 PMID:11228257 PMID:11479731 More... NCBI chr 2:188,564,348...188,590,872
Ensembl chr 2:188,547,767...188,592,242
JBrowse link
G Phgdh phosphoglycerate dehydrogenase ISO ClinVar Annotator: match by term: HMG-CoA synthase-2 deficiency ClinVar PMID:25741868 NCBI chr 2:188,595,700...188,624,789
Ensembl chr 2:188,595,700...188,624,789
JBrowse link
hyperinsulinemic hypoglycemia term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abcc8 ATP binding cassette subfamily C member 8 ISS
ISO
OMIM:256450 | OMIM:601820 | OMIM:602485 | OMIM:606762 | OMIM:609968 | OMIM:609975 | OMIM:610021
ClinVar Annotator: match by term: HYPERINSULINEMIC HYPOGLYCEMIA, PERSISTENT | ClinVar Annotator: match by term: HYPERINSULINISM, FAMILIAL, WITH PANCREATIC NESIDIOBLASTOSIS | ClinVar Annotator: match by term: Persistent Hyperinsulinemia Hypoglycemia of Infancy | ClinVar Annotator: match by term: Persistent hyperinsulinemic hypoglycemia of infancy
ClinVar Annotator: match by term: HYPERINSULINEMIC HYPOGLYCEMIA, PERSISTENT | ClinVar Annotator: match by term: HYPERINSULINISM, FAMILIAL, WITH PANCREATIC NESIDIOBLASTOSIS | ClinVar Annotator: match by term: Hyperinsulinemic hypoglycemia | ClinVar Annotator: match by term: Persistent Hyperinsulinemia Hypoglycemia of Infancy | ClinVar Annotator: match by term: Persistent hyperinsulinemic hypoglycemia of infancy
MouseDO
ClinVar
PMID:1021286 PMID:2198959 PMID:7716548 PMID:7908292 PMID:8650576 More... NCBI chr 1:105,734,992...105,816,272
Ensembl chr 1:105,734,992...105,815,982
JBrowse link
G Gck glucokinase ISS OMIM:256450 | OMIM:601820 | OMIM:602485 | OMIM:606762 | OMIM:609968 | OMIM:609975 | OMIM:610021 MouseDO NCBI chr14:84,999,019...85,041,098
Ensembl chr14:84,999,020...85,040,949
JBrowse link
G Hadh hydroxyacyl-CoA dehydrogenase ISO ClinVar Annotator: match by term: Hyperinsulinemic hypoglycemia | ClinVar Annotator: match by term: Persistent Hyperinsulinemia Hypoglycemia of Infancy
ClinVar Annotator: match by term: Hyperinsulinemic hypoglycemia | ClinVar Annotator: match by term: Persistent hyperinsulinemic hypoglycemia of infancy
ClinVar PMID:8825408 PMID:16725361 PMID:19417036 PMID:21347589 PMID:23275527 More... NCBI chr 2:222,462,049...222,504,446
Ensembl chr 2:222,462,049...222,504,446
JBrowse link
G Kcnj11 potassium inwardly-rectifying channel, subfamily J, member 11 ISO ClinVar Annotator: match by term: HYPERINSULINEMIC HYPOGLYCEMIA, PERSISTENT | ClinVar Annotator: match by term: Hyperinsulinemic hypoglycemia ClinVar PMID:9867219 PMID:10559219 PMID:11318841 PMID:11692183 PMID:11872696 More... NCBI chr 1:105,727,473...105,731,167
Ensembl chr 1:105,727,570...105,731,169
JBrowse link
hyperinsulinism term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abcc8 ATP binding cassette subfamily C member 8 susceptibility ISO ClinVar Annotator: match by term: Hereditary hyperinsulinism | ClinVar Annotator: match by term: Hyperinsulinemia | ClinVar Annotator: match by term: Hyperinsulinism, Dominant | ClinVar Annotator: match by term: Hyperinsulinism, Dominant/Recessive
ClinVar Annotator: match by term: Hereditary hyperinsulinism | ClinVar Annotator: match by term: Hyperinsulinemia | ClinVar Annotator: match by term: Hyperinsulinism, Dominant/Recessive
ClinVar
RGD
PMID:1021286 PMID:7716548 PMID:8923011 PMID:9041101 PMID:9075812 More... RGD:1625279, RGD:1598639 NCBI chr 1:105,734,992...105,816,272
Ensembl chr 1:105,734,992...105,815,982
JBrowse link
G Adcyap1 adenylate cyclase activating polypeptide 1 ISO RGD PMID:14742740 RGD:2325255 NCBI chr 9:120,550,236...120,569,096
Ensembl chr 9:120,550,328...120,556,383
JBrowse link
G Adipoq adiponectin, C1Q and collagen domain containing IEP RGD PMID:16414018 RGD:1599145 NCBI chr11:91,226,524...91,240,244
Ensembl chr11:91,226,180...91,240,169
JBrowse link
G Adipor1 adiponectin receptor 1 IEP mRNA:decreased expression:skeletal muscle cell RGD PMID:16326833 RGD:1625765 NCBI chr13:48,411,438...48,431,251
Ensembl chr13:48,411,826...48,431,255
JBrowse link
G Adipor2 adiponectin receptor 2 IEP mRNA:increased expression:skeletal muscle cell RGD PMID:16326833 RGD:1625765 NCBI chr 4:154,195,440...154,261,141
Ensembl chr 4:154,172,567...154,231,666
JBrowse link
G Adm adrenomedullin ISO associated with Obesity;protein:increased expression:plasma RGD PMID:15789277 RGD:1625301 NCBI chr 1:174,164,178...174,182,372
Ensembl chr 1:174,178,773...174,182,371
JBrowse link
G Adra1b adrenoceptor alpha 1B susceptibility ISO RGD PMID:14581480 PMID:14581480 RGD:1625772, RGD:1625772 NCBI chr10:28,756,461...28,874,831
Ensembl chr10:28,756,461...28,814,347
JBrowse link
G Adrb3 adrenoceptor beta 3 ISO associated with Obesity;mRNA:decreased expression:epidydimis, white fat RGD PMID:11014217 RGD:2313165 NCBI chr16:71,544,603...71,547,410
Ensembl chr16:71,542,567...71,547,420
JBrowse link
G Agt angiotensinogen ISO associated with obesity;DNA:polymorphism: :p.M235T RGD PMID:16713443 RGD:1601142 NCBI chr19:69,426,540...69,447,017
Ensembl chr19:69,421,638...69,446,944
JBrowse link
G Agtr1a angiotensin II receptor, type 1a IEP RGD PMID:16565309 RGD:1642975 NCBI chr17:34,383,397...34,435,523
Ensembl chr17:34,381,467...34,435,660
JBrowse link
G Bbs1 Bardet-Biedl syndrome 1 ISO RGD PMID:33722691 RGD:243065268 NCBI chr 1:211,614,195...211,633,504
Ensembl chr 1:211,615,533...211,633,468
JBrowse link
G Brd2 bromodomain containing 2 ISO RGD PMID:19883376 RGD:9586446 NCBI chr20:4,728,282...4,737,286
Ensembl chr20:4,728,951...4,737,290
JBrowse link
G Ccl2 C-C motif chemokine ligand 2 IEP
ISO
mRNA, protein:increased expression:aorta (rat)
CTD Direct Evidence: marker/mechanism
CTD
RGD
PMID:29035695 PMID:17180354 RGD:8549642 NCBI chr10:67,503,077...67,504,875
Ensembl chr10:67,503,077...67,504,875
JBrowse link
G Cd163 CD163 molecule ISO CTD Direct Evidence: marker/mechanism CTD PMID:29035695 NCBI chr 4:158,770,751...158,804,146
Ensembl chr 4:158,770,749...158,804,146
JBrowse link
G Cd40 CD40 molecule ISO CTD Direct Evidence: marker/mechanism CTD PMID:29035695 NCBI chr 3:174,209,113...174,224,592
Ensembl chr 3:174,209,719...174,224,847
JBrowse link
G Cd68 Cd68 molecule ISO CTD Direct Evidence: marker/mechanism CTD PMID:29035695 NCBI chr10:54,880,562...54,882,441
Ensembl chr10:54,880,563...54,882,540
JBrowse link
G Cdkn1c cyclin-dependent kinase inhibitor 1C ISO DNA:loss of heterozygosity:pancreatic islet RGD PMID:11723059 RGD:2311334 NCBI chr 1:208,084,801...208,087,680
Ensembl chr 1:208,084,787...208,087,498
JBrowse link
G Col3a1 collagen type III alpha 1 chain ISO CTD Direct Evidence: marker/mechanism CTD PMID:20836762 NCBI chr 9:54,866,646...54,902,578
Ensembl chr 9:54,866,632...54,903,232
JBrowse link
G Ddc dopa decarboxylase ISO protein:increased expression:pancreatic beta cell (human) RGD PMID:16403819 RGD:5129140 NCBI chr14:90,592,304...90,682,830
Ensembl chr14:90,592,304...90,682,806
JBrowse link
G Fanca FA complementation group A ISO CTD Direct Evidence: marker/mechanism CTD PMID:22482891 NCBI chr19:68,210,562...68,271,080
Ensembl chr19:68,212,643...68,271,019
JBrowse link
G Fancc FA complementation group C ISO CTD Direct Evidence: marker/mechanism CTD PMID:22482891 NCBI chr17:1,686,374...1,818,672
Ensembl chr17:1,687,017...1,835,096
JBrowse link
G Fbn1 fibrillin 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:20836762 NCBI chr 3:133,007,693...133,204,277
Ensembl chr 3:133,008,361...133,204,283
JBrowse link
G Foxa2 forkhead box A2 ISO RGD PMID:11445544 RGD:2313243 NCBI chr 3:155,923,305...155,927,508
Ensembl chr 3:155,923,307...155,928,757
JBrowse link
G Gcg glucagon ISO CTD Direct Evidence: marker/mechanism CTD PMID:3019152 NCBI chr 3:67,522,489...67,531,533
Ensembl chr 3:67,522,489...67,531,533
JBrowse link
G Gck glucokinase ISO hyperinsulinemic hypoglycemia,OMIM:602485;DNA:point mutation:exon:V455M
ClinVar Annotator: match by term: Hyperinsulinism, Dominant
ClinVar
RGD
PMID:27269892 PMID:29510678 PMID:30257192 PMID:31197960 PMID:32375122 More... RGD:1601294 NCBI chr14:84,999,019...85,041,098
Ensembl chr14:84,999,020...85,040,949
JBrowse link
G Gfpt1 glutamine fructose-6-phosphate transaminase 1 IEP mRNA:increased expression:gastrocnemius RGD PMID:16555472 RGD:1624365 NCBI chr 4:119,496,691...119,546,472
Ensembl chr 4:121,054,045...121,103,799
JBrowse link
G Gip gastric inhibitory polypeptide IEP protein:decreased expression:plasma (rat) RGD PMID:8059006 RGD:2312550 NCBI chr10:81,465,070...81,473,216
Ensembl chr10:81,465,062...81,473,216
JBrowse link
G Glud1 glutamate dehydrogenase 1 ISO familial hyperinsulinemic hypoglycemia-6,OMIM:606762;DNA:point mutation:exon:E296A
ClinVar Annotator: match by term: Hyperinsulinism, Dominant
CTD Direct Evidence: marker/mechanism
ClinVar
CTD
RGD
PMID:9571255 PMID:25741868 PMID:26467025 PMID:28492532 PMID:10636977 More... RGD:1601353, RGD:6484656 NCBI chr16:9,646,569...9,680,215
Ensembl chr16:9,646,509...9,680,210
JBrowse link
G Gpx1 glutathione peroxidase 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:15184668 PMID:18560803 NCBI chr 8:117,905,462...117,906,588
Ensembl chr 8:117,905,280...117,906,581
JBrowse link
G Hadh hydroxyacyl-CoA dehydrogenase ISO ClinVar Annotator: match by term: Hyperinsulinism, Dominant/Recessive ClinVar PMID:25741868 PMID:28492532 PMID:29280746 PMID:34055426 PMID:34547194 NCBI chr 2:222,462,049...222,504,446
Ensembl chr 2:222,462,049...222,504,446
JBrowse link
G Hmox1 heme oxygenase 1 ISO CTD Direct Evidence: therapeutic CTD PMID:19171794 NCBI chr19:13,452,365...13,479,823
Ensembl chr19:13,472,884...13,479,818
JBrowse link
G Hnf4a hepatocyte nuclear factor 4, alpha ISO ClinVar Annotator: match by term: Hyperinsulinemia | ClinVar Annotator: match by term: Hyperinsulinism due to HNF4A deficiency | ClinVar Annotator: match by term: Hyperinsulinism, Dominant ClinVar
RGD
PMID:9267996 PMID:9313765 PMID:9449683 PMID:10983627 PMID:15793260 More... RGD:12904698 NCBI chr 3:172,606,220...172,667,758
Ensembl chr 3:172,606,220...172,667,758
JBrowse link
G Hp haptoglobin ISO protein:increased expression:serum RGD PMID:17598972 RGD:1626335 NCBI chr19:54,449,151...54,453,701
Ensembl chr19:54,446,217...54,467,518
JBrowse link
G Il6 interleukin 6 ISO associated with Diabetes Mellitus, Non-Insulin-Dependent; protein:increased expression:extracellular space (human) RGD PMID:19375766 RGD:2307250 NCBI chr 4:5,889,999...5,894,575
Ensembl chr 4:5,889,999...5,894,610
JBrowse link
G Ins2 insulin 2 ISO CTD Direct Evidence: marker/mechanism CTD
RGD
PMID:2991050 PMID:3511099 PMID:4019786 PMID:6382002 PMID:36764371 More... RGD:1625121 NCBI chr 1:207,272,738...207,421,998
Ensembl chr 1:207,272,742...207,273,805
JBrowse link
G Insr insulin receptor ISO CTD Direct Evidence: marker/mechanism
DNA:missense mutation: :p.P1195L (mouse)
CTD
RGD
PMID:10949030 PMID:18411068 PMID:10949030 PMID:21549686 RGD:1302523, RGD:10403034 NCBI chr12:5,991,135...6,129,275
Ensembl chr12:5,981,835...6,128,803
JBrowse link
G Ireb2 iron responsive element binding protein 2 IEP protein:increased expression:liver (rat) RGD PMID:25385842 RGD:12903966 NCBI chr 8:55,228,080...55,311,613
Ensembl chr 8:64,154,945...64,205,520
JBrowse link
G Irs1 insulin receptor substrate 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:19734900 NCBI chr 9:91,001,137...91,053,959
Ensembl chr 9:90,993,519...91,054,538
JBrowse link
G Itgam integrin subunit alpha M ISO CTD Direct Evidence: marker/mechanism CTD PMID:29035695 NCBI chr 1:192,089,496...192,139,947
Ensembl chr 1:192,089,542...192,139,943
JBrowse link
G Kcnj11 potassium inwardly-rectifying channel, subfamily J, member 11 ISO ClinVar Annotator: match by term: Hyperinsulinemia | ClinVar Annotator: match by term: Hyperinsulinism | ClinVar Annotator: match by term: Hyperinsulinism, Dominant/Recessive
protein:substitution: :p.H259R (human)
ClinVar
RGD
PMID:9867219 PMID:11318841 PMID:11692183 PMID:11872696 PMID:12196481 More... RGD:1625279, RGD:1625277 NCBI chr 1:105,727,473...105,731,167
Ensembl chr 1:105,727,570...105,731,169
JBrowse link
G Lep leptin ISO
IMP
CTD Direct Evidence: marker/mechanism CTD
RGD
PMID:9826672 PMID:22948215 RGD:12904911 NCBI chr 4:58,626,529...58,640,663
Ensembl chr 4:58,626,523...58,640,661
JBrowse link
G Lepem1Sage leptin; zinc finger nuclease induced mutant1, Sage IMP RGD PMID:22948215 RGD:12904911
G Lepr leptin receptor IMP
ISO
CTD Direct Evidence: marker/mechanism CTD
RGD
PMID:3519326 PMID:15093691 PMID:22949526 PMID:24384915 PMID:25222487 More... RGD:12911216 NCBI chr 5:121,409,735...121,593,201
Ensembl chr 5:121,474,099...121,591,215
JBrowse link
G Leprem4Lizh leptin receptor; CRISPR/Cas9 induced mutant 4, Lizh IMP RGD PMID:26537785 RGD:12911216
G Lipc lipase C, hepatic type IDA
ISO
associated with Diabetes Mellitus, Experimental; protein:increased expression:liver (rat)
associated with Diabetes Mellitus, Non-Insulin-Dependent; protein:decreased expression:plasma (human)
RGD PMID:7047662 PMID:1592086 PMID:11095452 RGD:2308800, RGD:2308794, RGD:2308844 NCBI chr 8:80,390,470...80,516,463
Ensembl chr 8:80,390,471...80,516,285
JBrowse link
G Lta lymphotoxin alpha ISO associated with Coronary Arteriosclerosis RGD PMID:9726033 RGD:1625034 NCBI chr20:3,622,291...3,625,852
Ensembl chr20:3,623,527...3,625,533
JBrowse link
G Mc4r melanocortin 4 receptor ISO CTD Direct Evidence: marker/mechanism CTD PMID:23251400 NCBI chr18:62,689,798...62,691,685 JBrowse link
G Mgrn1 mahogunin ring finger 1 ISO RGD PMID:16638826 RGD:1641947 NCBI chr10:11,142,626...11,194,773
Ensembl chr10:11,145,690...11,194,805
JBrowse link
G Mrc1 mannose receptor, C type 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:29035695 NCBI chr17:82,157,725...82,239,411
Ensembl chr17:82,157,705...82,239,410
JBrowse link
G Mttp microsomal triglyceride transfer protein susceptibility ISO DNA:polymorphism:promoter:-493G>T RGD PMID:11849654 RGD:1625490 NCBI chr 2:229,286,501...229,327,650
Ensembl chr 2:229,286,501...229,327,650
JBrowse link
G Neil1 nei-like DNA glycosylase 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:16446448 NCBI chr 8:66,446,106...66,452,844
Ensembl chr 8:66,445,953...66,452,378
JBrowse link
G Nos3 nitric oxide synthase 3 ISO CTD Direct Evidence: therapeutic CTD PMID:19008412 NCBI chr 4:11,686,088...11,706,604
Ensembl chr 4:11,686,268...11,706,664
JBrowse link
G Npy5r neuropeptide Y receptor Y5 IDA RGD PMID:15187000 RGD:1625494 NCBI chr16:27,822,055...27,830,012
Ensembl chr16:27,816,065...27,830,290
JBrowse link
G Parl presenilin associated, rhomboid-like no_association ISO DNA:missense mutation:cds:p.L262V (human) RGD PMID:15729572 PMID:19185381 RGD:12880443, RGD:12880445 NCBI chr11:80,594,059...80,620,506
Ensembl chr11:94,097,934...94,148,287
JBrowse link
G Pfkfb1 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 1 IEP associated with Obesity;protein:increased expression:liver RGD PMID:9705027 RGD:2302681 NCBI chr  X:22,936,038...22,989,691
Ensembl chr  X:22,937,494...22,989,704
JBrowse link
G Pklr pyruvate kinase L/R ISO mRNA:increased expression:liver RGD PMID:14766002 RGD:1625581 NCBI chr 2:176,840,779...176,849,637
Ensembl chr 2:176,840,764...176,849,644
JBrowse link
G Prkcd protein kinase C, delta IEP RGD PMID:8826977 RGD:1625605 NCBI chr16:5,775,681...5,806,122
Ensembl chr16:5,775,681...5,805,839
JBrowse link
G Prkcq protein kinase C, theta IEP associated with Diabetes Mellitus, Type 2;protein:decreased expression:soleus RGD PMID:8826977 RGD:1625605 NCBI chr17:72,156,215...72,288,508
Ensembl chr17:72,156,215...72,288,508
JBrowse link
G Pten phosphatase and tensin homolog IEP protein:decreased expression:ovary RGD PMID:18421022 RGD:2292519 NCBI chr 1:240,043,707...240,110,330
Ensembl chr 1:240,043,707...240,110,330
JBrowse link
G Ptpn1 protein tyrosine phosphatase, non-receptor type 1 ISO
IEP
CTD Direct Evidence: therapeutic
associated with Carotid Artery Injuries;mRNA, protein:altered expression, altered activity:carotid artery (rat)
CTD
RGD
PMID:28899902 PMID:19011046 RGD:401965418 NCBI chr 3:177,056,588...177,106,424
Ensembl chr 3:177,057,659...177,106,416
JBrowse link
G Ptprf protein tyrosine phosphatase, receptor type, F ISO mouse model overexpressing human transgene RGD PMID:11309481 RGD:1642735 NCBI chr 5:137,027,376...137,109,405
Ensembl chr 5:137,028,164...137,095,426
JBrowse link
G Rbp4 retinol binding protein 4 onset ISO associated with coronary artery disease;protein:increased expression:blood serum (human) RGD PMID:25233041 RGD:329845593 NCBI chr 1:245,306,349...245,313,551
Ensembl chr 1:245,306,349...245,313,898
JBrowse link
G Rps6kb1 ribosomal protein S6 kinase B1 IEP protein:increased phosphorylation:liver, skeletal muscle RGD PMID:15692808 RGD:1643026 NCBI chr10:71,817,794...71,865,211
Ensembl chr10:71,815,614...71,865,238
JBrowse link
G Scd stearoyl-CoA desaturase IEP associated with Obesity RGD PMID:16284748 RGD:1580005 NCBI chr 1:253,218,968...253,232,101
Ensembl chr 1:253,218,970...253,231,785
JBrowse link
G Shld2 shieldin complex subunit 2 ISO ClinVar Annotator: match by term: Hyperinsulinism, Dominant ClinVar NCBI chr16:9,554,921...9,646,186
Ensembl chr16:9,553,854...9,588,510
JBrowse link
G Slc16a1 solute carrier family 16 member 1 ISO ClinVar Annotator: match by term: Hyperinsulinism, Dominant ClinVar PMID:25741868 PMID:28492532 NCBI chr 2:194,805,556...194,832,966
Ensembl chr 2:194,812,502...194,832,977
JBrowse link
G Slc27a1 solute carrier family 27 member 1 IEP protein:increased expression:soleus muscle, protein:decreased expression:gastrocnemius muscle RGD PMID:15281014 RGD:1642794 NCBI chr16:18,278,984...18,300,173
Ensembl chr16:18,313,015...18,330,045
JBrowse link
G Tnf tumor necrosis factor ISO CTD Direct Evidence: marker/mechanism CTD PMID:29035695 NCBI chr20:3,626,685...3,629,303
Ensembl chr20:3,626,532...3,629,303
JBrowse link
G Tsc22d3 TSC22 domain family, member 3 ISO CTD Direct Evidence: marker/mechanism CTD PMID:22556341 NCBI chr  X:109,006,410...109,066,389
Ensembl chr  X:109,006,420...109,015,519
JBrowse link
G Txnip thioredoxin interacting protein susceptibility ISO DNA:nonsense mutation RGD PMID:15047687 RGD:1642753 NCBI chr 2:186,781,933...186,785,736
Ensembl chr 2:186,781,163...186,785,731
JBrowse link
G Ucp2 uncoupling protein 2 ISO ClinVar Annotator: match by term: UCP2-related condition ClinVar PMID:25741868 PMID:28492532 NCBI chr 1:164,251,373...164,257,742
Ensembl chr 1:164,251,373...164,257,743
JBrowse link
hypoglycemia term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abcc8 ATP binding cassette subfamily C member 8 IMP
ISO
ClinVar Annotator: match by term: Hypoglycemia ClinVar
RGD
PMID:10204114 PMID:10685980 PMID:16380471 PMID:16416420 PMID:16613899 More... RGD:2301896 NCBI chr 1:105,734,992...105,816,272
Ensembl chr 1:105,734,992...105,815,982
JBrowse link
G Agtr2 angiotensin II receptor, type 2 ISO associated with Diabetes Mellitus, Insulin-Dependent;DNA:polymorphism: :1675G>A (human) RGD PMID:18328310 RGD:2313551 NCBI chr  X:116,914,320...116,918,504
Ensembl chr  X:116,913,656...116,918,745
JBrowse link
G Ahr aryl hydrocarbon receptor ISO CTD Direct Evidence: therapeutic CTD PMID:34848246 NCBI chr 6:57,961,423...57,998,901
Ensembl chr 6:57,961,423...57,998,901
JBrowse link
G Akt2 AKT serine/threonine kinase 2 ISO RGD PMID:21979934 RGD:7248543 NCBI chr 1:92,004,705...92,061,420
Ensembl chr 1:92,014,859...92,061,420
JBrowse link
G Cacna1c calcium voltage-gated channel subunit alpha1 C ISO CTD Direct Evidence: marker/mechanism CTD PMID:15454078 NCBI chr 4:153,431,169...154,051,932
Ensembl chr 4:153,436,427...154,051,762
JBrowse link
G Creb1 cAMP responsive element binding protein 1 ISO RGD PMID:11557984 RGD:734816 NCBI chr 9:73,397,333...73,466,339
Ensembl chr 9:73,397,306...73,466,339
JBrowse link
G Crh corticotropin releasing hormone IDA RGD PMID:12606499 RGD:704397 NCBI chr 2:104,059,184...104,061,048
Ensembl chr 2:104,058,770...104,061,386
JBrowse link
G Epo erythropoietin ISO associated with Diabetes Mellitus, Insulin-Dependent;protein:increased expression:plasma RGD PMID:19211168 RGD:2313835 NCBI chr12:24,841,285...24,844,725
Ensembl chr12:24,841,285...24,844,725
JBrowse link
G G6pc1 glucose-6-phosphatase catalytic subunit 1 ISO ClinVar Annotator: match by term: Hypoglycemia ClinVar PMID:2172641 PMID:7573034 PMID:7623438 PMID:7744838 PMID:7814621 More... NCBI chr10:86,807,659...86,819,023
Ensembl chr10:86,757,899...86,818,033
JBrowse link
G Gck glucokinase ISO hyperinsulinemic hypoglycemia,OMIM:602485;DNA:point mutation:exon:V455M RGD PMID:9435328 RGD:1601294 NCBI chr14:84,999,019...85,041,098
Ensembl chr14:84,999,020...85,040,949
JBrowse link
G Glud1 glutamate dehydrogenase 1 ISO familial hyperinsulinemic hypoglycemia-6,OMIM:606762;DNA:point mutation:exon:E296A RGD PMID:10636977 RGD:1601353 NCBI chr16:9,646,569...9,680,215
Ensembl chr16:9,646,509...9,680,210
JBrowse link
G Gpx3 glutathione peroxidase 3 ISO mRNA:increased expression:retina RGD PMID:21738719 RGD:401827130 NCBI chr10:39,529,335...39,537,406
Ensembl chr10:39,529,448...39,537,405
JBrowse link
G Grin2b glutamate ionotropic receptor NMDA type subunit 2B IEP mRNA, protein:increased expression:cerebellum (rat) RGD PMID:20056114 RGD:4107025 NCBI chr 4:170,297,811...170,775,420
Ensembl chr 4:170,322,617...170,773,570
JBrowse link
G Gsr glutathione-disulfide reductase ISO CTD Direct Evidence: marker/mechanism CTD PMID:20620209 NCBI chr16:65,185,574...65,228,742
Ensembl chr16:65,185,574...65,228,394
JBrowse link
G Hnf1a HNF1 homeobox A ISO CTD Direct Evidence: marker/mechanism CTD PMID:15787664 NCBI chr12:47,299,171...47,333,457
Ensembl chr12:47,306,245...47,332,755
JBrowse link
G Hnf4a hepatocyte nuclear factor 4, alpha ISO associated with Hyperinsulinemia;DNA:frameshift mutation, nonsense mutation, splice-site mutation RGD PMID:18268044 PMID:17407387 RGD:2301837, RGD:12904698 NCBI chr 3:172,606,220...172,667,758
Ensembl chr 3:172,606,220...172,667,758
JBrowse link
G Igf2 insulin-like growth factor 2 ISO CTD Direct Evidence: marker/mechanism CTD PMID:3185662 NCBI chr 1:207,243,873...207,261,263
Ensembl chr 1:207,243,873...207,260,667
JBrowse link
G Il1b interleukin 1 beta ISO CTD Direct Evidence: marker/mechanism CTD PMID:1884014 NCBI chr 3:137,030,200...137,036,581
Ensembl chr 3:137,030,205...137,036,601
JBrowse link
G Inppl1 inositol polyphosphate phosphatase-like 1 ISO RGD PMID:11343120 RGD:737755 NCBI chr 1:165,595,047...165,609,503
Ensembl chr 1:165,595,063...165,609,503
JBrowse link
G Ins1 insulin 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:222008 PMID:3084764 PMID:6797439 PMID:18545258 NCBI chr 1:261,186,119...261,186,686
Ensembl chr 1:261,186,119...261,186,682
JBrowse link
G Ins2 insulin 2 ISO CTD Direct Evidence: marker/mechanism CTD PMID:48835 PMID:1324617 PMID:1646414 PMID:1890151 PMID:2554359 More... NCBI chr 1:207,272,738...207,421,998
Ensembl chr 1:207,272,742...207,273,805
JBrowse link
G Kcnj11 potassium inwardly-rectifying channel, subfamily J, member 11 ISO ClinVar Annotator: match by term: Hypoglycemia ClinVar PMID:18596924 PMID:20032456 PMID:23700433 PMID:27908292 PMID:31464105 NCBI chr 1:105,727,473...105,731,167
Ensembl chr 1:105,727,570...105,731,169
JBrowse link
G Myom1 myomesin 1 ISO ClinVar Annotator: match by term: Hypoglycemia ClinVar PMID:25741868 PMID:28492532 NCBI chr 9:118,362,547...118,485,954
Ensembl chr 9:118,362,621...118,485,952
JBrowse link
G Nsd2 nuclear receptor binding SET domain protein 2 ISO ClinVar Annotator: match by term: Hypoglycemia ClinVar PMID:25741868 NCBI chr14:81,057,727...81,135,866
Ensembl chr14:81,057,727...81,123,027
JBrowse link
G Pik3r1 phosphoinositide-3-kinase regulatory subunit 1 ISO RGD PMID:9988280 RGD:737788 NCBI chr 2:34,612,946...34,697,660
Ensembl chr 2:34,612,946...34,626,347
JBrowse link
G Pnmt phenylethanolamine-N-methyltransferase IEP associated with Diabetes Mellitus, Experimental; mRNA:decreased expression:adrenal gland (rat) RGD PMID:15494609 RGD:5130725 NCBI chr10:83,383,019...83,386,557
Ensembl chr10:83,881,185...83,882,849
JBrowse link
G Ppara peroxisome proliferator activated receptor alpha ISO CTD Direct Evidence: marker/mechanism CTD PMID:16777972 NCBI chr 7:118,712,261...118,780,723
Ensembl chr 7:118,712,412...118,780,714
JBrowse link
G Ppp1r3a protein phosphatase 1, regulatory subunit 3A ISO associated with Diabetes Mellitus, Non-Insulin-Dependent;DNA:insertion/deletion:3' UTR (human) RGD PMID:9814479 RGD:1601469 NCBI chr 4:42,937,353...42,980,195
Ensembl chr 4:43,905,648...43,946,236
JBrowse link
G Prl prolactin ISO associated with Hypertension RGD PMID:16617309 RGD:1642557 NCBI chr17:38,287,355...38,298,234
Ensembl chr17:38,288,162...38,298,217
JBrowse link
G Scn9a sodium voltage-gated channel alpha subunit 9 ISO ClinVar Annotator: match by term: Hypoglycemia ClinVar PMID:19763161 PMID:23129781 PMID:25250524 PMID:25741868 PMID:26467025 More... NCBI chr 3:71,553,185...71,701,377
Ensembl chr 3:71,553,189...71,701,377
JBrowse link
G Serpina1 serpin family A member 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:17659342 NCBI chr 6:128,631,101...128,653,125
Ensembl chr 6:128,619,382...128,660,703
JBrowse link
G Sod2 superoxide dismutase 2 ISO CTD Direct Evidence: marker/mechanism CTD PMID:20620209 NCBI chr 1:50,043,323...50,050,168
Ensembl chr 1:50,043,325...50,050,168
JBrowse link
G Th tyrosine hydroxylase IEP associated with Diabetes Mellitus, Experimental; protein:increased expression:adrenal gland (rat) RGD PMID:16396986 RGD:5130724 NCBI chr 1:207,500,959...207,508,276
Ensembl chr 1:207,500,962...207,557,227
JBrowse link
G Tnf tumor necrosis factor ISO CTD Direct Evidence: marker/mechanism CTD PMID:8774068 NCBI chr20:3,626,685...3,629,303
Ensembl chr20:3,626,532...3,629,303
JBrowse link
G Ucp3 uncoupling protein 3 ISO RGD PMID:10935638 RGD:737762 NCBI chr 1:164,227,910...164,240,893
Ensembl chr 1:164,227,882...164,241,210
JBrowse link
hypoinsulinemic hypoglycemia with hemihypertrophy term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Akt2 AKT serine/threonine kinase 2 ISO ClinVar Annotator: match by term: Hypoinsulinemic hypoglycemia and body hemihypertrophy | ClinVar Annotator: match by term: Hypoinsulinemic hypoglycemia and hemihypertrophy OMIM
ClinVar
PMID:15166380 PMID:16722806 PMID:17327441 PMID:21518566 PMID:21979934 More... NCBI chr 1:92,004,705...92,061,420
Ensembl chr 1:92,014,859...92,061,420
JBrowse link
Infantile-Onset Multisystem Neurologic, Endocrine, and Pancreatic Disease term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ptrh2 peptidyl-tRNA hydrolase 2 ISO ClinVar Annotator: match by term: Neurologic, endocrine, and pancreatic disease, multisystem, infantile-onset ClinVar PMID:25558065 PMID:25741868 PMID:27129381 PMID:28328138 NCBI chr10:71,505,113...71,515,297
Ensembl chr10:71,985,245...72,045,352
JBrowse link
G S100pbp S100P binding protein ISO ClinVar Annotator: match by term: Neurologic, endocrine, and pancreatic disease, multisystem, infantile-onset ClinVar PMID:25741868 NCBI chr 5:141,494,352...141,535,752
Ensembl chr 5:146,780,061...146,819,822
JBrowse link
G Yars1 tyrosyl-tRNA synthetase 1 ISO ClinVar Annotator: match by term: Neurologic, endocrine, and pancreatic disease, multisystem, infantile-onset ClinVar PMID:25741868 NCBI chr 5:146,820,163...146,848,377
Ensembl chr 5:146,819,358...146,848,377
JBrowse link
Infantile-Onset Multisystem Neurologic, Endocrine, and Pancreatic Disease 1 term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cltc clathrin heavy chain ISO ClinVar Annotator: match by term: Neurologic, endocrine, and pancreatic disease, multisystem, infantile-onset 1 ClinVar PMID:25741868 PMID:39825153 NCBI chr10:72,014,984...72,073,308
Ensembl chr10:72,014,986...72,070,691
JBrowse link
G Ptrh2 peptidyl-tRNA hydrolase 2 ISO ClinVar Annotator: match by term: Neurologic, endocrine, and pancreatic disease, multisystem, infantile-onset 1 | ClinVar Annotator: match by term: PTRH2-related condition OMIM
ClinVar
PMID:25558065 PMID:25741868 PMID:27129381 PMID:28328138 PMID:28492532 More... NCBI chr10:71,505,113...71,515,297
Ensembl chr10:71,985,245...72,045,352
JBrowse link
Infantile-Onset Multisystem Neurologic, Endocrine, and Pancreatic Disease 2 term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arsa arylsulfatase A ISO ClinVar Annotator: match by term: Neurologic, endocrine, and pancreatic disease, multisystem, infantile-onset 2 ClinVar PMID:15326627 PMID:18786133 PMID:25741868 PMID:28492532 PMID:30674982 More... NCBI chr 7:122,422,971...122,426,971
Ensembl chr 7:122,422,982...122,428,401
JBrowse link
G Yars1 tyrosyl-tRNA synthetase 1 ISO ClinVar Annotator: match by term: Neurologic, endocrine, and pancreatic disease, multisystem, infantile-onset 2 OMIM
ClinVar
PMID:3034524 PMID:14606043 PMID:16429158 PMID:19561293 PMID:25741868 More... NCBI chr 5:146,820,163...146,848,377
Ensembl chr 5:146,819,358...146,848,377
JBrowse link
Insulin Resistance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acaca acetyl-CoA carboxylase alpha treatment IDA
IEP
RGD PMID:16485039 PMID:26394137 RGD:1625727, RGD:329955565 NCBI chr10:69,511,627...69,773,888
Ensembl chr10:69,511,857...69,773,888
JBrowse link
G Acacb acetyl-CoA carboxylase beta treatment IDA
IEP
ISO
CTD Direct Evidence: marker/mechanism CTD
RGD
PMID:22658938 PMID:16485039 PMID:26394137 RGD:1625727, RGD:329955565 NCBI chr12:48,026,394...48,138,214
Ensembl chr12:48,026,394...48,138,214
JBrowse link
G Ace angiotensin I converting enzyme ISO GAD PMID:15118671 RGD:1331525 NCBI chr10:91,410,129...91,430,246
Ensembl chr10:91,409,819...91,430,942
JBrowse link
G Acp1 acid phosphatase 1 ISO associated with Obesity RGD PMID:17353188 RGD:2313180 NCBI chr 6:53,233,937...53,249,576
Ensembl chr 6:53,233,948...53,251,959
JBrowse link
G Acsl1 acyl-CoA synthetase long-chain family member 1 ISO mRNA:decreased expression:subcutaneous adipose tissue RGD PMID:16788709 RGD:1625735 NCBI chr16:52,487,870...52,554,110
Ensembl chr16:52,487,870...52,554,023
JBrowse link
G Adipoq adiponectin, C1Q and collagen domain containing treatment IEP
ISO
CTD Direct Evidence: therapeutic
associated with Hypertension
CTD
RGD
PMID:18931039 PMID:21484566 PMID:16041833 PMID:23089228 PMID:21872431 RGD:1599150, RGD:8695951, RGD:8695928 NCBI chr11:91,226,524...91,240,244
Ensembl chr11:91,226,180...91,240,169
JBrowse link
G Adipor1 adiponectin receptor 1 resistance ISO associated with Diabetes Mellitus, Type 2;DNA:SNP: :-3881T>C RGD PMID:17285539 RGD:1625762 NCBI chr13:48,411,438...48,431,251
Ensembl chr13:48,411,826...48,431,255
JBrowse link
G Adipor2 adiponectin receptor 2 treatment IEP RGD PMID:30225267 PMID:24797033 RGD:21406435, RGD:25824940 NCBI chr 4:154,195,440...154,261,141
Ensembl chr 4:154,172,567...154,231,666
JBrowse link
G Adm adrenomedullin ISO CTD Direct Evidence: therapeutic CTD PMID:33491863 NCBI chr 1:174,164,178...174,182,372
Ensembl chr 1:174,178,773...174,182,371
JBrowse link
G Adora1 adenosine A1 receptor treatment ISO
IDA
associated with Obesity RGD PMID:11703426 PMID:15220221 RGD:2313807, RGD:1625243 NCBI chr13:48,210,922...48,247,826
Ensembl chr13:48,213,273...48,247,190
JBrowse link
G Adra1b adrenoceptor alpha 1B susceptibility ISO RGD PMID:14581480 PMID:14581480 RGD:1625772, RGD:1625772 NCBI chr10:28,756,461...28,874,831
Ensembl chr10:28,756,461...28,814,347
JBrowse link
G Adrb2 adrenoceptor beta 2 ISO
IDA
DNA:polymorphism: :p.R16G
CTD Direct Evidence: marker/mechanism
CTD
RGD
PMID:19034036 PMID:15699455 PMID:11510954 RGD:1601125, RGD:1598757 NCBI chr18:57,912,760...57,914,802
Ensembl chr18:57,911,348...57,914,803
JBrowse link
G Adrb3 adrenoceptor beta 3 no_association ISO DNA:missense mutation:cds:p.W64R rs4994 (human)
associated with Obesity;DNA:polymorphism: :p.W64R (human)
RGD PMID:10421225 PMID:17299491 PMID:10582543 RGD:1559326, RGD:2313158, RGD:5684421 NCBI chr16:71,544,603...71,547,410
Ensembl chr16:71,542,567...71,547,420
JBrowse link
G Agtr2 angiotensin II receptor, type 2 IEP protein:increased expression:dorsal root ganglion, neuron RGD PMID:22357959 RGD:6903873 NCBI chr  X:116,914,320...116,918,504
Ensembl chr  X:116,913,656...116,918,745
JBrowse link
G Ahr aryl hydrocarbon receptor ISO CTD Direct Evidence: marker/mechanism CTD PMID:25734695 NCBI chr 6:57,961,423...57,998,901
Ensembl chr 6:57,961,423...57,998,901
JBrowse link
G Ahsg alpha-2-HS-glycoprotein susceptibility ISO protein:increased expression:plasma RGD PMID:17011519 PMID:17011519 PMID:16567827 RGD:1625793, RGD:1625793, RGD:1625794 NCBI chr11:91,625,975...91,632,583
Ensembl chr11:91,625,975...91,634,039
JBrowse link
G Akt2 AKT serine/threonine kinase 2 no_association ISO DNA:SNPs RGD PMID:17327441 RGD:1601155 NCBI chr 1:92,004,705...92,061,420
Ensembl chr 1:92,014,859...92,061,420
JBrowse link
G Aldh2 aldehyde dehydrogenase 2 family member treatment IEP protein:altered expression, altered activity:liver (rat) RGD PMID:28688179 RGD:14981582 NCBI chr12:40,610,244...40,643,220
Ensembl chr12:40,610,224...40,643,219
JBrowse link
G Alox15 arachidonate 15-lipoxygenase ISO RGD PMID:19787041 RGD:5509625 NCBI chr10:55,559,060...55,567,535
Ensembl chr10:55,559,061...55,567,723
JBrowse link
G Ankrd26 ankyrin repeat domain containing 26 ISO RGD PMID:18162531 RGD:9681744 NCBI chr 4:151,670,604...151,740,032
Ensembl chr 4:153,343,578...153,412,256
JBrowse link
G Apln apelin IEP mRNA:increased expression:subcutaneous adipose tissue RGD PMID:17594060 RGD:1626170 NCBI chr  X:127,180,801...127,213,567
Ensembl chr  X:132,081,759...132,091,246
JBrowse link
G Apoa2 apolipoprotein A2 ISO RGD PMID:11246886 RGD:2313957 NCBI chr13:83,644,460...83,646,358
Ensembl chr13:86,174,741...86,179,410
JBrowse link
G Apoc1 apolipoprotein C1 ISO associated with Diabetes Mellitus, Non-Insulin-Dependent RGD PMID:11723061 RGD:2313951 NCBI chr 1:79,347,057...79,350,340
Ensembl chr 1:88,474,663...88,478,155
JBrowse link
G Apoc3 apolipoprotein C3 susceptibility
treatment
ISO
IEP
RGD PMID:15734841 PMID:15007394 RGD:1601226, RGD:1580750 NCBI chr 8:55,428,172...55,430,352
Ensembl chr 8:55,428,024...55,458,679
JBrowse link
G Ar androgen receptor ISO CTD Direct Evidence: marker/mechanism
associated with Polycystic Ovary Syndrome;DNA:repeat: :CAG
CTD
RGD
PMID:21444647 PMID:17332526 PMID:16793958 RGD:1601244, RGD:2306773 NCBI chr  X:67,135,317...67,304,476
Ensembl chr  X:67,135,317...67,304,467
JBrowse link
G Arg1 arginase 1 IEP protein:decreased activity:liver (rat) RGD PMID:20593143 RGD:4142796 NCBI chr 1:22,295,093...22,307,720
Ensembl chr 1:22,295,322...22,307,713
JBrowse link
G As3mt arsenite methyltransferase ISO CTD Direct Evidence: marker/mechanism CTD PMID:35226250 NCBI chr 1:255,536,879...255,569,245
Ensembl chr 1:255,537,109...255,569,249
JBrowse link
G Atm ATM serine/threonine kinase treatment IEP
ISO
protein:decreased expression:muscle:
Associated with human immunodeficiency virus infectious disease, hepatitis C;DNA:SNP:intron: (rs11212617) (human)
RGD PMID:18534819 PMID:23171036 RGD:8693659, RGD:126781688 NCBI chr 8:62,724,939...62,829,040
Ensembl chr 8:62,727,291...62,828,629
JBrowse link
G Atp1a2 ATPase Na+/K+ transporting subunit alpha 2 ISO mRNA:increased expression:skeletal muscle RGD PMID:14576983 RGD:1601252 NCBI chr13:87,261,964...87,286,911
Ensembl chr13:87,261,968...87,286,911
JBrowse link
G Bad BCL2-associated agonist of cell death IDA protein:decreased phosphorylation, increased dimerization, increased glycosylation:heart RGD PMID:21385329 RGD:10053645 NCBI chr 1:213,562,719...213,572,034
Ensembl chr 1:213,562,187...213,572,034
JBrowse link
G Bche butyrylcholinesterase ISO RGD PMID:17917325 RGD:2306776 NCBI chr 2:160,607,289...160,699,760
Ensembl chr 2:160,606,288...160,699,760
JBrowse link
G Bdkrb1 bradykinin receptor B1 IMP
IEP
RGD PMID:17618300 PMID:17988733 RGD:5129217, RGD:5129214 NCBI chr 6:130,275,631...130,284,968
Ensembl chr 6:130,275,478...130,280,973
JBrowse link
G Bscl2 BSCL2 lipid droplet biogenesis associated, seipin IMP RGD PMID:25934999 RGD:11085488 NCBI chr 1:215,160,764...215,172,540
Ensembl chr 1:215,160,957...215,172,536
JBrowse link
G Bscl2m1Kyo BSCL2, seipin lipid droplet biogenesis associated; ENU induced mutant1, Kyo IMP RGD PMID:25934999 RGD:11085488
G C1r complement C1r ISO protein:increased expression:adipocyte RGD PMID:17244723 RGD:1600551 NCBI chr 4:159,099,013...159,109,770
Ensembl chr 4:159,098,918...159,109,714
JBrowse link
G C3 complement C3 ISO CTD Direct Evidence: marker/mechanism CTD PMID:18615583 NCBI chr 9:2,174,412...2,201,339
Ensembl chr 9:2,174,412...2,201,339
JBrowse link
G Capn10 calpain 10 ISO DNA:SNP:intron:rs3792267 (human) RGD PMID:11018080 RGD:7247736 NCBI chr 9:100,943,665...100,957,910
Ensembl chr 9:100,945,551...100,957,912
JBrowse link
G Casp1 caspase 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:22325453 NCBI chr 8:10,746,338...10,882,295
Ensembl chr 8:10,746,333...10,882,275
JBrowse link
G Casp3 caspase 3 treatment IEP RGD PMID:29748970 RGD:13782289 NCBI chr16:52,395,539...52,413,794
Ensembl chr16:52,395,540...52,413,732
JBrowse link
G Casp8 caspase 8 IEP RGD PMID:29748970 RGD:13782289 NCBI chr 9:67,747,109...67,806,699
Ensembl chr 9:67,758,033...67,806,699
JBrowse link
G Cat catalase ISO associated with Obesity RGD PMID:19188683 RGD:5130761 NCBI chr 3:110,297,340...110,329,526
Ensembl chr 3:110,297,342...110,329,526
JBrowse link
G Cblb Cbl proto-oncogene B ISO RGD PMID:17601987 RGD:2314038 NCBI chr11:62,058,829...62,225,904
Ensembl chr11:62,061,653...62,225,778
JBrowse link
G Ccl2 C-C motif chemokine ligand 2 susceptibility ISO associated with Obesity in Diabetes;DNA:polymorphism:promoter:-2518A>G (human)
CTD Direct Evidence: marker/mechanism
CTD
RGD
PMID:29035695 PMID:18762729 PMID:22983634 RGD:2306985, RGD:8548844 NCBI chr10:67,503,077...67,504,875
Ensembl chr10:67,503,077...67,504,875
JBrowse link
G Cd163 CD163 molecule exacerbates ISO CTD Direct Evidence: marker/mechanism
associated with hepatitis C, human immunodeficiency virus infectious disease;protein:increased expression:blood plasma (human)
CTD
RGD
PMID:29035695 PMID:26554542 RGD:149735574 NCBI chr 4:158,770,751...158,804,146
Ensembl chr 4:158,770,749...158,804,146
JBrowse link
G Cd36 CD36 molecule ISO
IMP
associated with Diabetes Mellitus, Type 2
CTD Direct Evidence: marker/mechanism
CTD
RGD
PMID:14640889 PMID:15231693 PMID:25477422 PMID:12923231 PMID:11175782 RGD:2307217, RGD:11041132, RGD:11040926, RGD:68930 NCBI chr 4:18,209,088...18,302,142 JBrowse link
G Cd40 CD40 molecule ISO CTD Direct Evidence: marker/mechanism CTD PMID:29035695 NCBI chr 3:174,209,113...174,224,592
Ensembl chr 3:174,209,719...174,224,847
JBrowse link
G Cd68 Cd68 molecule ISO CTD Direct Evidence: marker/mechanism CTD PMID:29035695 NCBI chr10:54,880,562...54,882,441
Ensembl chr10:54,880,563...54,882,540
JBrowse link
G Cers1 ceramide synthase 1 ameliorates ISO RGD PMID:30605666 RGD:156431060 NCBI chr16:19,097,309...19,112,519
Ensembl chr16:19,131,276...19,146,480
JBrowse link
G Cnr1 cannabinoid receptor 1 IMP associated with Obesity RGD PMID:19553924 RGD:2314662 NCBI chr 5:53,204,867...53,230,396
Ensembl chr 5:53,204,260...53,239,252
JBrowse link
G Cntf ciliary neurotrophic factor TAS possible therapeutic agent RGD PMID:16675997 RGD:1626122 NCBI chr 1:219,312,512...219,314,535
Ensembl chr 1:219,312,512...219,314,488
JBrowse link
G Coq2 coenzyme Q2, polyprenyltransferase IEP associated with obesity RGD PMID:26296322 RGD:10755343 NCBI chr14:8,941,429...8,961,418
Ensembl chr14:9,245,803...9,265,783
JBrowse link
G Cpb2 carboxypeptidase B2 ISO associated with Diabetes Mellitus, Non-Insulin-Dependent;protein:increased expression, increased activity:plasma RGD PMID:11836301 RGD:2313645 NCBI chr15:56,967,128...57,015,964
Ensembl chr15:56,966,839...57,015,962
JBrowse link
G Cpe carboxypeptidase E ISO CTD Direct Evidence: marker/mechanism CTD PMID:15358678 NCBI chr16:29,796,707...29,908,647
Ensembl chr16:29,796,689...29,909,524
JBrowse link
G Cst3 cystatin C ISO associated with Diabetes Mellitus, Non-Insulin Dependent; protein:increased expression:serum (human) RGD PMID:19765773 RGD:2314305 NCBI chr 3:156,790,061...156,794,116
Ensembl chr 3:156,790,079...156,793,937
JBrowse link
G Ctf1 cardiotrophin 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:21803294 NCBI chr 1:182,328,035...182,336,346
Ensembl chr 1:191,757,477...191,776,395
JBrowse link
G Cyp2r1 cytochrome P450, family 2, subfamily r, polypeptide 1 ISO DNA:SNP:CDS: rs12794714|rs10766197 (human) RGD PMID:34906413 RGD:401900724 NCBI chr 1:178,166,984...178,232,191
Ensembl chr 1:178,219,704...178,232,423
JBrowse link
G Dgat2 diacylglycerol O-acyltransferase 2 treatment IEP RGD PMID:26394137 RGD:329955565 NCBI chr 1:162,866,237...162,896,655
Ensembl chr 1:162,866,237...162,896,566
JBrowse link
G Dio2 iodothyronine deiodinase 2 ISO DNA:SNP: :rs225014, p.T92A (human) RGD PMID:11872697 RGD:2313698 NCBI chr 6:115,396,308...115,410,594
Ensembl chr 6:115,396,308...115,410,594
JBrowse link
G Drd1 dopamine receptor D1 IEP associated with Obesity;protein:increased serine phosphorylation:renal proximal tubule RGD PMID:15798088 RGD:2302119 NCBI chr17:10,545,488...10,550,029
Ensembl chr17:10,545,111...10,567,166
JBrowse link
G Ech1 enoyl-CoA hydratase 1 treatment ISO RGD PMID:31961704 RGD:21408561 NCBI chr 1:93,241,076...93,248,314
Ensembl chr 1:93,241,734...93,248,440
JBrowse link
G Egfr epidermal growth factor receptor ISO CTD Direct Evidence: marker/mechanism CTD PMID:22238402 NCBI chr14:95,378,626...95,551,358
Ensembl chr14:95,378,626...95,551,358
JBrowse link
G Enpp1 ectonucleotide pyrophosphatase/phosphodiesterase 1 ISO DNA:polymorphism:K121Q
ClinVar Annotator: match by term: Insulin resistance, susceptibility to
ClinVar
RGD
PMID:10480624 PMID:11739459 PMID:14671192 PMID:14988267 PMID:15001634 More... RGD:1601043 NCBI chr 1:22,518,051...22,583,044
Ensembl chr 1:22,518,069...22,583,044
JBrowse link
G F7 coagulation factor VII severity ISO associated with Diabetes Mellitus, Non-Insulin-Dependent; protein:increased activity:plasma (human) RGD PMID:9187410 RGD:2312406 NCBI chr16:83,191,896...83,202,775
Ensembl chr16:83,191,914...83,202,738
JBrowse link
G Fabp2 fatty acid binding protein 2 no_association ISO DNA:SNP:CDS:p.A54T (human)
DNA:polymorphism:CDS:p.A54T (human)
DNA:polymorphism:CDS:amino acid A54T, in healthy, moderately overweight subjects in Baton Rouge
RGD PMID:7883976 PMID:17211557 PMID:14981227 PMID:16311100 RGD:1300314, RGD:1626407, RGD:1626400, RGD:1578456 NCBI chr 2:211,040,032...211,044,089
Ensembl chr 2:213,724,629...213,728,686
JBrowse link
G Fabp3 fatty acid binding protein 3 severity ISO RGD PMID:16249436 RGD:1578459 NCBI chr 5:147,936,027...147,942,870
Ensembl chr 5:147,936,119...147,942,881
JBrowse link
G Fabp4 fatty acid binding protein 4 IEP RGD PMID:17391165 RGD:1625407 NCBI chr 2:93,488,251...93,492,961
Ensembl chr 2:93,488,271...93,492,972
JBrowse link
G Fanca FA complementation group A ISO RGD PMID:22482891 RGD:11046266 NCBI chr19:68,210,562...68,271,080
Ensembl chr19:68,212,643...68,271,019
JBrowse link
G Fancc FA complementation group C ISO RGD PMID:22482891 RGD:11046266 NCBI chr17:1,686,374...1,818,672
Ensembl chr17:1,687,017...1,835,096
JBrowse link
G Fas Fas cell surface death receptor treatment IEP associated with hypothalamic disease RGD PMID:29522769 RGD:13792596 NCBI chr 1:241,212,155...241,245,774
Ensembl chr 1:241,205,935...241,246,104
JBrowse link
G Fasn fatty acid synthase treatment IEP RGD PMID:26394137 RGD:329955565 NCBI chr10:106,570,415...106,588,581
Ensembl chr10:106,570,413...106,588,583
JBrowse link
G Fgf19 fibroblast growth factor 19 ISO CTD Direct Evidence: marker/mechanism CTD PMID:28673684 NCBI chr 1:209,485,813...209,490,267
Ensembl chr 1:209,485,813...209,490,267
JBrowse link
G Fis1 fission, mitochondrial 1 IEP protein:increased expression:liver (rat) RGD PMID:24663492 RGD:12453042 NCBI chr12:25,345,239...25,360,135
Ensembl chr12:25,345,239...25,349,335
JBrowse link
G Foxc2 forkhead box C2 ISO DNA:polymorphism:5'ut:-512C>T RGD PMID:12453913 RGD:1601219 NCBI chr19:66,094,718...66,097,420
Ensembl chr19:66,094,700...66,153,977
JBrowse link
G Foxo1 forkhead box O1 IEP mRNA:increased expression:adipose tissue: RGD PMID:16041833 RGD:1599150 NCBI chr 2:138,462,974...138,541,420
Ensembl chr 2:138,462,697...138,541,419
JBrowse link
G Fto FTO, alpha-ketoglutarate dependent dioxygenase ISO
IEP
associated with diabetes mellitus;DNA:SNP: :rs9939609 (human)
mRNA, protein:increased expression:liver
DNA:SNPs, haplotype: :rs1121980, rs1558902, rs9939609 (human)
associated with obesity;DNA:SNP:intron:rs17817449 (human)
RGD PMID:30273662 PMID:35945320 PMID:20075932 PMID:21919686 RGD:329812018, RGD:329951016, RGD:329853775, RGD:329812040 NCBI chr19:31,456,749...31,865,011
Ensembl chr19:31,522,293...31,864,957
JBrowse link
G Fxn frataxin ISO DNA:repeats:intron:GAA (human) RGD PMID:10969848 RGD:2307049 NCBI chr 1:231,300,457...231,323,989
Ensembl chr 1:231,300,150...231,323,989
JBrowse link
G G6pd glucose-6-phosphate dehydrogenase IEP associated with Obesity;protein:increased expression:pancreas RGD PMID:23015612 RGD:10449129 NCBI chr  X:157,352,364...157,372,144
Ensembl chr  X:157,352,373...157,372,144
JBrowse link
G Gck glucokinase IEP protein:increased expression:pancreatic islet RGD PMID:19039094 RGD:7488970 NCBI chr14:84,999,019...85,041,098
Ensembl chr14:84,999,020...85,040,949
JBrowse link
G Gfpt1 glutamine fructose-6-phosphate transaminase 1 ISO RGD PMID:11118009 RGD:1625423 NCBI chr 4:119,496,691...119,546,472
Ensembl chr 4:121,054,045...121,103,799
JBrowse link
G Gh1 growth hormone 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:21559284 NCBI chr10:91,727,883...91,729,860
Ensembl chr10:91,727,884...91,729,859
JBrowse link
G Gnas GNAS complex locus ISO CTD Direct Evidence: marker/mechanism CTD PMID:17062894 NCBI chr 3:183,489,648...183,554,570
Ensembl chr 3:183,503,243...183,554,536
JBrowse link
G Gnb3 G protein subunit beta 3 ISO DNA:polymorphism: :825C>T (human) RGD PMID:12624279 RGD:1580411 NCBI chr 4:157,639,468...157,645,171
Ensembl chr 4:159,325,742...159,331,445
JBrowse link
G Gpam glycerol-3-phosphate acyltransferase, mitochondrial treatment IEP RGD PMID:26394137 RGD:329955565 NCBI chr 1:264,111,599...264,176,112
Ensembl chr 1:264,113,813...264,175,911
JBrowse link
G Gpr17 G protein-coupled receptor 17 ISO CTD Direct Evidence: marker/mechanism CTD PMID:34144038 NCBI chr18:23,850,460...23,857,381
Ensembl chr18:23,850,107...23,857,702
JBrowse link
G Gpx3 glutathione peroxidase 3 ISO
IEP
CTD Direct Evidence: marker/mechanism
protein:increased expression:plasma
CTD
RGD
PMID:19270708 PMID:24361363 RGD:401827920 NCBI chr10:39,529,335...39,537,406
Ensembl chr10:39,529,448...39,537,405
JBrowse link
G Grk2 G protein-coupled receptor kinase 2 ISO RGD PMID:15994203 RGD:1625791 NCBI chr 1:211,010,259...211,031,013
Ensembl chr 1:211,009,978...211,031,015
JBrowse link
G Gsta4 glutathione S-transferase alpha 4 ISO mRNA:decreased expression:omental fat pad, subcutaneous adipose tissue (human) RGD PMID:20150287 RGD:5687771 NCBI chr 8:87,947,247...87,964,490
Ensembl chr 8:87,930,566...87,964,488
JBrowse link
G Gys1 glycogen synthase 1 susceptibility ISO associated with Diabetes Mellitus, Non-Insulin-Dependent;DNA:missense mutation:exon:p.M416V (human) RGD PMID:9267990 RGD:2313176 NCBI chr 1:105,051,916...105,071,763
Ensembl chr 1:105,051,961...105,072,419
JBrowse link
G Hamp hepcidin antimicrobial peptide IEP mRNA:decreased expression:liver RGD PMID:17350134 RGD:1601515 NCBI chr 1:95,298,332...95,300,271
Ensembl chr 1:95,298,307...95,300,297
JBrowse link
G Hmga1 high mobility group AT-hook 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:23512162 NCBI chr20:5,612,902...5,620,596
Ensembl chr20:5,613,471...5,620,593
JBrowse link
G Hmox1 heme oxygenase 1 ISO CTD Direct Evidence: marker/mechanism|therapeutic CTD
RGD
PMID:18375438 PMID:19171794 PMID:12941774 RGD:1601621 NCBI chr19:13,452,365...13,479,823
Ensembl chr19:13,472,884...13,479,818
JBrowse link
G Hnf1a HNF1 homeobox A ISO mRNA:decreased expression:adipocyte
ClinVar Annotator: match by term: SERUM HDL CHOLESTEROL LEVEL, MODIFIER OF
ClinVar
RGD
PMID:8945470 PMID:9112026 PMID:9287053 PMID:9604876 PMID:10333057 More... RGD:1601482 NCBI chr12:47,299,171...47,333,457
Ensembl chr12:47,306,245...47,332,755
JBrowse link
G Hsd11b1 hydroxysteroid 11-beta dehydrogenase 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:21786805 NCBI chr13:107,277,526...107,327,462
Ensembl chr13:107,257,239...107,327,432
JBrowse link
G Hspd1 heat shock protein family D (Hsp60) member 1 IEP RGD PMID:18948349 RGD:10402862 NCBI chr 9:64,073,610...64,084,332
Ensembl chr 9:64,073,611...64,084,037
JBrowse link
G Htr2a 5-hydroxytryptamine receptor 2A ISO associated with Peripheral Vascular Diseases RGD PMID:17062970 RGD:1624367 NCBI chr15:56,360,647...56,428,703
Ensembl chr15:56,359,596...56,431,619
JBrowse link
G Icam1 intercellular adhesion molecule 1 ISO associated with Obesity;protein:increased secretion:plasma (human)
protein:increased expression:serum
RGD PMID:11782876 PMID:19394054 RGD:1625753, RGD:2313467 NCBI chr 8:27,829,688...27,841,618
Ensembl chr 8:27,829,161...27,841,617
JBrowse link
G Igf2bp2 insulin-like growth factor 2 mRNA binding protein 2 ISO CTD Direct Evidence: marker/mechanism CTD PMID:35226250 NCBI chr11:92,378,908...92,478,893
Ensembl chr11:92,378,908...92,478,867
JBrowse link
G Igfals insulin-like growth factor binding protein, acid labile subunit ISO CTD Direct Evidence: marker/mechanism CTD PMID:17726072 NCBI chr10:14,397,076...14,408,439
Ensembl chr10:14,403,399...14,407,138
JBrowse link
G Igfbp2 insulin-like growth factor binding protein 2 ISO CTD Direct Evidence: marker/mechanism CTD
RGD
PMID:22537059 PMID:17259371 RGD:1626479 NCBI chr 9:81,864,811...81,892,179
Ensembl chr 9:81,864,783...81,892,171
JBrowse link
G Igfbp3 insulin-like growth factor binding protein 3 ISO RGD PMID:17237715 RGD:2313762 NCBI chr14:86,270,208...86,277,944
Ensembl chr14:86,270,208...86,277,944
JBrowse link
G Igfbp6 insulin-like growth factor binding protein 6 ISO human transgene overexpressed in mouse brain RGD PMID:15889232 RGD:2301717 NCBI chr 7:135,154,919...135,159,550
Ensembl chr 7:135,154,685...135,159,795
JBrowse link
G Igfbp7 insulin-like growth factor binding protein 7 ISO protein:increased expression:serum
associated with metabolic dysfunction-associated steatotic liver disease
RGD PMID:16873698 PMID:31397492 RGD:1626516, RGD:401960873 NCBI chr14:31,091,681...31,151,623
Ensembl chr14:31,091,347...31,151,620
JBrowse link
G Ikbkb inhibitor of nuclear factor kappa B kinase subunit beta treatment IEP
ISO
CTD Direct Evidence: marker/mechanism CTD
RGD
PMID:29036520 PMID:19073766 RGD:7495768 NCBI chr16:76,021,968...76,075,717
Ensembl chr16:76,022,008...76,081,911
JBrowse link
G Il18 interleukin 18 treatment ISO associated with Graves Disease RGD PMID:23257837 PMID:16732281 RGD:8655938, RGD:14695532 NCBI chr 8:59,802,072...59,829,275
Ensembl chr 8:59,809,592...59,831,286
JBrowse link
G Il1b interleukin 1 beta treatment ISO
IEP
associated with Obesity;mRNA:increased expression:adipose tissue
associated with hypothalamic disease
RGD PMID:16865359 PMID:29522769 RGD:1626632, RGD:13792596 NCBI chr 3:137,030,200...137,036,581
Ensembl chr 3:137,030,205...137,036,601
JBrowse link
G Il6 interleukin 6 IDA
IEP
associated with Diabetes Mellitus, Experimental; protein:increased expression:extracellular space (rat)
mRNA:increased expression:islet of Langerhans
RGD PMID:19328014 PMID:21826222 RGD:2307252, RGD:10402828 NCBI chr 4:5,889,999...5,894,575
Ensembl chr 4:5,889,999...5,894,610
JBrowse link
G Il6r interleukin 6 receptor ISO protein:decreased expression:serum RGD PMID:14962155 RGD:1625431 NCBI chr 2:177,582,020...177,646,705
Ensembl chr 2:177,582,164...177,645,221
JBrowse link
G Il7 interleukin 7 ISO CTD Direct Evidence: therapeutic CTD PMID:20376352 NCBI chr 2:96,142,523...96,186,282
Ensembl chr 2:96,142,092...96,187,389
JBrowse link
G Inppl1 inositol polyphosphate phosphatase-like 1 IMP associated with Metabolic Syndrome X RGD PMID:17327370 PMID:12453826 RGD:2312440, RGD:2312442 NCBI chr 1:165,595,047...165,609,503
Ensembl chr 1:165,595,063...165,609,503
JBrowse link
G Ins1 insulin 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:19586609 NCBI chr 1:261,186,119...261,186,686
Ensembl chr 1:261,186,119...261,186,682
JBrowse link
G Ins2 insulin 2 ISO CTD Direct Evidence: marker/mechanism CTD
RGD
PMID:11522680 PMID:24648896 PMID:25796170 PMID:33651899 PMID:3322910 RGD:2311112 NCBI chr 1:207,272,738...207,421,998
Ensembl chr 1:207,272,742...207,273,805
JBrowse link
G Insr insulin receptor disease_progression
treatment
ISO
IEP
ClinVar Annotator: match by term: Insulin resistance | ClinVar Annotator: match by term: Insulin resistance, susceptibility to | ClinVar Annotator: match by term: Insulin-resistance syndrome type A
ClinVar Annotator: match by term: Insulin resistance | ClinVar Annotator: match by term: Insulin-resistance syndrome type A
mRNA, protein:decreased expression:liver (rat)
CTD Direct Evidence: marker/mechanism
ClinVar
CTD
RGD
PMID:1314826 PMID:1644241 PMID:1890161 PMID:1963473 PMID:1971035 More... RGD:1302523, RGD:11529553, RGD:10403037 NCBI chr12:5,991,135...6,129,275
Ensembl chr12:5,981,835...6,128,803
JBrowse link
G Irs1 insulin receptor substrate 1 ISO DNA:polymorphism:exon:G972R
CTD Direct Evidence: marker/mechanism
ClinVar Annotator: match by term: Insulin resistance, susceptibility to
CTD
ClinVar
RGD
PMID:1311924 PMID:7623569 PMID:8104271 PMID:8647950 PMID:10084586 More... RGD:1624973 NCBI chr 9:91,001,137...91,053,959
Ensembl chr 9:90,993,519...91,054,538
JBrowse link
G Irs2 insulin receptor substrate 2 ISO DNA:polymorphism:exon:G1057D
CTD Direct Evidence: marker/mechanism
CTD
RGD
PMID:25808216 PMID:15811564 RGD:1625025 NCBI chr16:85,190,310...85,214,543
Ensembl chr16:85,190,111...85,214,543
JBrowse link
G Itgam integrin subunit alpha M ISO CTD Direct Evidence: marker/mechanism CTD PMID:29035695 NCBI chr 1:192,089,496...192,139,947
Ensembl chr 1:192,089,542...192,139,943
JBrowse link
G Kcnj11 potassium inwardly-rectifying channel, subfamily J, member 11 ISO CTD Direct Evidence: marker/mechanism CTD PMID:9032110 NCBI chr 1:105,727,473...105,731,167
Ensembl chr 1:105,727,570...105,731,169
JBrowse link
G Kcnmb1 potassium calcium-activated channel subfamily M regulatory beta subunit 1 IEP mRNA, protein:decreased expression:aorta, mesenteric artery RGD PMID:21425425 RGD:10412047 NCBI chr10:18,557,510...18,614,824
Ensembl chr10:19,062,291...19,073,204
JBrowse link
G Klf11 KLF transcription factor 11 ISO RGD PMID:18505768 RGD:2311539 NCBI chr 6:47,014,312...47,026,152
Ensembl chr 6:47,014,326...47,037,044
JBrowse link
G Klf14 KLF transcription factor 14 ISO CTD Direct Evidence: marker/mechanism CTD PMID:29632379 NCBI chr 4:59,554,011...59,556,933
Ensembl chr 4:60,521,363...60,524,285
JBrowse link
G Klk1 kallikrein 1 ISO RGD PMID:17272402 RGD:1641794 NCBI chr 1:94,642,644...94,646,760
Ensembl chr 1:103,779,164...103,783,270
JBrowse link
G Klk1c12 kallikrein 1-related peptidase C12 ISO RGD PMID:17272402 RGD:1641794 NCBI chr 1:94,378,103...94,382,140
Ensembl chr 1:103,514,590...103,518,712
JBrowse link
G Lep leptin IEP
ISO
IMP
protein:increased expression:plasma
CTD Direct Evidence: marker/mechanism|therapeutic
DNA:nonsense mutation:cds:
associated with Obesity
CTD
RGD
PMID:10753628 PMID:11342529 PMID:24150608 PMID:29650965 PMID:19296906 More... RGD:5128697, RGD:8549777, RGD:2311127 NCBI chr 4:58,626,529...58,640,663
Ensembl chr 4:58,626,523...58,640,661
JBrowse link
G Lepm1Kyo leptin; ENU induced mutant1, Kyo IMP RGD PMID:23800849 RGD:8549777
G Lepr leptin receptor ISO
IAGP
associated with Obesity;DNA:polymorphism: :p.K656N (human)
CTD Direct Evidence: marker/mechanism
associated with Diabetes Mellitus, Non-Insulin-Dependent;DNA:polymorphism: :p.K656N (human)
CTD
RGD
PMID:19452630 PMID:20567778 PMID:25367288 PMID:28611668 PMID:29988851 More... RGD:2311142, RGD:13432147, RGD:2311138 NCBI chr 5:121,409,735...121,593,201
Ensembl chr 5:121,474,099...121,591,215
JBrowse link
G Leprfa leptin receptor; fa mutant IAGP RGD PMID:23154293 RGD:13432147
G Lipc lipase C, hepatic type ISO CTD Direct Evidence: marker/mechanism CTD PMID:15504970 NCBI chr 8:80,390,470...80,516,463
Ensembl chr 8:80,390,471...80,516,285
JBrowse link
G Lmna lamin A/C ISO ClinVar Annotator: match by term: Insulin-resistance syndrome type A ClinVar PMID:15919811 PMID:16478798 PMID:20848652 PMID:23785128 PMID:24033266 More... NCBI chr 2:176,237,564...176,265,301
Ensembl chr 2:176,237,564...176,288,072
JBrowse link
G Lpin1 lipin 1 ISO RGD PMID:17563064 RGD:1641822 NCBI chr 6:45,039,110...45,145,845
Ensembl chr 6:45,041,522...45,145,991
JBrowse link
G Lpl lipoprotein lipase ISO RGD PMID:18952837 RGD:2313300 NCBI chr16:25,596,205...25,621,928
Ensembl chr16:25,596,211...25,622,107
JBrowse link
G Lta lymphotoxin alpha no_association ISO DNA:polymorphism RGD PMID:9245742 RGD:1625035 NCBI chr20:3,622,291...3,625,852
Ensembl chr20:3,623,527...3,625,533
JBrowse link
G Mapk3 mitogen activated protein kinase 3 treatment IDA associated with polycystic ovary syndrome RGD PMID:23349861 RGD:13800789 NCBI chr 1:190,797,189...190,803,411
Ensembl chr 1:190,797,185...190,803,411
JBrowse link
G Mc4r melanocortin 4 receptor ISO
IEP
IMP
CTD Direct Evidence: marker/mechanism
mRNA, protein:decreased expression:liver (rat)
DNA:nonsense mutation:cds:p.K314X (rat)
CTD
RGD
PMID:18454146 PMID:35945320 PMID:24400148 RGD:329951016, RGD:13825242 NCBI chr18:62,689,798...62,691,685 JBrowse link
G Mc4rm1Hubr melanocortin 4 receptor; ENU induced mutation 1, Hubr IMP DNA:nonsense mutation:cds:p.K314X RGD PMID:24400148 RGD:13825242
G Metrnl meteorin-like, glial cell differentiation regulator ISO CTD Direct Evidence: therapeutic CTD PMID:30213948 NCBI chr10:107,462,148...107,476,143
Ensembl chr10:107,462,109...107,476,135
JBrowse link
G Mettl14 methyltransferase 14, N6-adenosine-methyltransferase non-catalytic subunit ISO CTD Direct Evidence: marker/mechanism CTD PMID:35226250 NCBI chr 2:214,215,165...214,231,412
Ensembl chr 2:214,215,165...214,231,412
JBrowse link
G Mfn2 mitofusin 2 treatment IEP RGD PMID:24715199 RGD:13204838 NCBI chr 5:163,587,463...163,617,363
Ensembl chr 5:163,587,463...163,618,495
JBrowse link
G Mif macrophage migration inhibitory factor ISO protein:increased expression:plasma RGD PMID:12552367 RGD:1641955 NCBI chr20:12,767,138...12,791,222
Ensembl chr 4:134,041,774...134,042,121
Ensembl chr20:134,041,774...134,042,121
JBrowse link
G Mir125a microRNA 125a ISO RGD PMID:31988048 RGD:21403676 NCBI chr 1:67,350,675...67,350,759
Ensembl chr 1:67,350,675...67,350,759
JBrowse link
G Mir155 microRNA 155 ISO miRNA:increased expression:serum RGD PMID:29479888 PMID:27711113 RGD:24922220, RGD:25671464 NCBI chr11:37,261,114...37,261,178
Ensembl chr11:37,261,114...37,261,178
JBrowse link
G Mir222 microRNA 222 ISO associated with polycystic ovary syndrome; RNA:increased expression:blood RGD PMID:33230470 RGD:151893462 NCBI chr  X:6,022,621...6,022,723
Ensembl chr  X:6,022,621...6,022,723
JBrowse link
G Mlxipl MLX interacting protein-like treatment IEP RGD PMID:26394137 RGD:329955565 NCBI chr12:27,178,158...27,213,675
Ensembl chr12:27,178,158...27,213,660
JBrowse link
G Mlycd malonyl-CoA decarboxylase treatment IEP RGD PMID:26394137 RGD:329955565 NCBI chr19:64,356,582...64,372,447
Ensembl chr19:64,356,223...64,372,446
JBrowse link
G Mrc1 mannose receptor, C type 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:29035695 NCBI chr17:82,157,725...82,239,411
Ensembl chr17:82,157,705...82,239,410
JBrowse link
G Nampt nicotinamide phosphoribosyltransferase ISO associated with Polycystic Ovary Syndrome;protein:increased expression:serum RGD PMID:17582143 RGD:1642341 NCBI chr 6:55,152,756...55,189,547
Ensembl chr 6:55,151,926...55,189,544
JBrowse link
G Neil1 nei-like DNA glycosylase 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:21285402 NCBI chr 8:66,446,106...66,452,844
Ensembl chr 8:66,445,953...66,452,378
JBrowse link
G Nfe2l2 NFE2 like bZIP transcription factor 2 ISO associated with obesity; protein:decreased expression:hepatocyte:
CTD Direct Evidence: therapeutic
CTD
RGD
PMID:33933676 PMID:32102936 RGD:21201281 NCBI chr 3:81,001,529...81,031,165
Ensembl chr 3:81,001,529...81,029,090
JBrowse link
G Nlrp3 NLR family, pyrin domain containing 3 ISO CTD Direct Evidence: marker/mechanism CTD PMID:35226250 NCBI chr10:44,826,299...44,853,373
Ensembl chr10:44,828,014...44,853,394
JBrowse link
G Nos2 nitric oxide synthase 2 IEP
ISO
mRNA, protein:increased expression:retroperitoneum, adipose tissue (rat) RGD PMID:22023455 PMID:21846719 RGD:5509041, RGD:5509075 NCBI chr10:64,313,335...64,349,221
Ensembl chr10:64,313,335...64,401,880
JBrowse link
G Nos3 nitric oxide synthase 3 treatment IEP
ISO
protein:decreased expression:serum
CTD Direct Evidence: marker/mechanism|therapeutic
CTD
RGD
PMID:11457755 PMID:12716763 PMID:12947532 PMID:19008412 PMID:18298918 More... RGD:2292098, RGD:13450950 NCBI chr 4:11,686,088...11,706,604
Ensembl chr 4:11,686,268...11,706,664
JBrowse link
G Nppb natriuretic peptide B ISO associated with Obesity and Hypertension;protein:decreased expression:serum RGD PMID:17392814 RGD:1642192 NCBI chr 5:163,699,955...163,701,314
Ensembl chr 5:163,699,839...163,701,310
JBrowse link
G Nr1h4 nuclear receptor subfamily 1, group H, member 4 susceptibility ISO RGD PMID:16557297 RGD:1625076 NCBI chr 7:25,733,471...25,829,440
Ensembl chr 7:25,733,471...25,829,389
JBrowse link
G Nr4a1 nuclear receptor subfamily 4, group A, member 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:17785466 NCBI chr 7:134,247,153...134,268,044
Ensembl chr 7:134,247,192...134,268,041
JBrowse link
G Nr4a3 nuclear receptor subfamily 4, group A, member 3 ISO CTD Direct Evidence: marker/mechanism CTD PMID:17785466 NCBI chr 5:67,157,141...67,198,287
Ensembl chr 5:67,157,375...67,198,285
JBrowse link
G Nus1 NUS1 dehydrodolichyl diphosphate synthase subunit ISO CTD Direct Evidence: therapeutic CTD PMID:33812996 NCBI chr20:31,811,817...31,838,562
Ensembl chr20:32,354,439...32,381,264
JBrowse link
G Parl presenilin associated, rhomboid-like IEP mRNA:decreased expression:gastrocnemius (rat) RGD PMID:19859837 RGD:12880442 NCBI chr11:80,594,059...80,620,506
Ensembl chr11:94,097,934...94,148,287
JBrowse link
G Pdx1 pancreatic and duodenal homeobox 1 ISO
IEP
associated with Diabetes Mellitus, Non-Insulin-Dependent; protein:decreased expression:pancreatic islet (mouse)
protein:increased expression:pancreatic duct (rat)
RGD PMID:18288891 PMID:16046294 RGD:2311222, RGD:2311223 NCBI chr12:12,793,957...12,799,156
Ensembl chr12:12,793,957...12,799,156
JBrowse link
G Pik3r1 phosphoinositide-3-kinase regulatory subunit 1 ISO
IDA
CTD Direct Evidence: marker/mechanism
associated with Pre-Eclampsia;protein:increased tyrosine phosphorylation:placenta
CTD
RGD
PMID:14714311 PMID:17283057 PMID:16332940 PMID:10426374 RGD:1625211, RGD:1625212, RGD:1625262 NCBI chr 2:34,612,946...34,697,660
Ensembl chr 2:34,612,946...34,626,347
JBrowse link
G Pklr pyruvate kinase L/R treatment ISO
IEP
mRNA, protein:decreased expression:liver RGD PMID:12958186 PMID:26394137 RGD:1625583, RGD:329955565 NCBI chr 2:176,840,779...176,849,637
Ensembl chr 2:176,840,764...176,849,644
JBrowse link
G Pla2g1b phospholipase A2 group IB susceptibility ISO RGD PMID:12376327 RGD:1302550 NCBI chr12:46,802,932...46,814,511
Ensembl chr12:46,802,939...46,813,693
JBrowse link
G Plac8 placenta associated 8 IEP associated with obesity RGD PMID:26296322 RGD:10755343 NCBI chr14:9,356,950...9,378,586
Ensembl chr14:9,356,972...9,378,572
JBrowse link
G Plekhs1 pleckstrin homology domain containing S1 IEP associated with obesity; RGD PMID:27523322 RGD:11532750 NCBI chr 1:255,495,634...255,525,353
Ensembl chr 1:265,500,830...265,533,350
JBrowse link
G Plin2 perilipin 2 ISO associated with Obesity RGD PMID:17484887 RGD:1625752 NCBI chr 5:106,202,634...106,258,748
Ensembl chr 5:106,202,634...106,258,878
JBrowse link
G Pltp phospholipid transfer protein ISO CTD Direct Evidence: marker/mechanism CTD PMID:12754275 NCBI chr 3:173,994,162...174,011,982
Ensembl chr 3:173,994,162...174,012,505
JBrowse link
G Pmch pro-melanin-concentrating hormone IDA RGD PMID:16002548 RGD:1642484 NCBI chr 7:22,511,934...22,513,250
Ensembl chr 7:24,399,404...24,400,720
JBrowse link
G Pon1 paraoxonase 1 ISO DNA:SNP:CDS:p.L55M (human), LL genotype (P < 0.001) RGD PMID:11788650 RGD:1642617 NCBI chr 4:34,261,312...34,292,327
Ensembl chr 4:34,261,289...34,287,924
JBrowse link
G Ppara peroxisome proliferator activated receptor alpha ISO CTD Direct Evidence: therapeutic CTD
RGD
PMID:16168052 PMID:21324916 PMID:19322024 RGD:5683642 NCBI chr 7:118,712,261...118,780,723
Ensembl chr 7:118,712,412...118,780,714
JBrowse link
G Ppard peroxisome proliferator-activated receptor delta ISO associated with Obesity
associated with Diabetes Mellitus, Non-Insulin-Dependent
RGD PMID:14676330 PMID:19818749 RGD:2324897, RGD:2313780 NCBI chr20:6,300,527...6,365,707
Ensembl chr20:6,352,183...6,365,707
JBrowse link
G Pparg peroxisome proliferator-activated receptor gamma ISO DNA:nonsense mutation
CTD Direct Evidence: therapeutic
CTD
RGD
PMID:16168052 PMID:21354099 PMID:21484566 PMID:12118251 RGD:1601446 NCBI chr 4:150,095,743...150,221,104
Ensembl chr 4:150,095,787...150,221,104
JBrowse link
G Ppargc1a PPARG coactivator 1 alpha treatment ISO
IEP
DNA:missense mutation:cds:p.G482S rs8192678 (human)
mRNA:decreased expression:liver (rat)
RGD PMID:23449621 PMID:26394137 PMID:22658649 RGD:7241821, RGD:329955565, RGD:7242170 NCBI chr14:63,073,505...63,729,215
Ensembl chr14:63,273,189...63,729,213
JBrowse link
G Ppargc1b PPARG coactivator 1 beta treatment ISO
IEP
RGD PMID:16896940 PMID:26394137 RGD:1642499, RGD:329955565 NCBI chr18:57,029,264...57,131,466
Ensembl chr18:57,029,275...57,131,466
JBrowse link
G Ppp1r3a protein phosphatase 1, regulatory subunit 3A ISO DNA:nonsense mutation
ClinVar Annotator: match by term: Insulin resistance, susceptibility to
DNA:polymorphism:exon:p.D905Y (human)
ClinVar
RGD
PMID:7581368 PMID:25741868 PMID:12118251 PMID:7581368 RGD:1601446, RGD:1601468 NCBI chr 4:42,937,353...42,980,195
Ensembl chr 4:43,905,648...43,946,236
JBrowse link
G Prdx3 peroxiredoxin 3 IEP associated with obesity; RGD PMID:27523322 RGD:11532750 NCBI chr 1:269,987,691...270,000,111
Ensembl chr 1:269,987,685...270,000,300
JBrowse link
G Prkaa1 protein kinase AMP-activated catalytic subunit alpha 1 IDA
ISO
associated with Obesity
CTD Direct Evidence: marker/mechanism
CTD
RGD
PMID:19934007 PMID:22231922 RGD:6484545 NCBI chr 2:55,967,766...56,003,450
Ensembl chr 2:55,967,351...56,003,450
JBrowse link
G Prkaa2 protein kinase AMP-activated catalytic subunit alpha 2 susceptibility ISO DNA:SNPs
CTD Direct Evidence: marker/mechanism
CTD
RGD
PMID:19934007 PMID:16567511 RGD:1625266 NCBI chr 5:125,036,945...125,109,010
Ensembl chr 5:125,042,179...125,108,324
JBrowse link
G Prkar1a protein kinase cAMP-dependent type I regulatory subunit alpha ISO CTD Direct Evidence: marker/mechanism CTD PMID:29367455 NCBI chr10:95,120,537...95,139,028
Ensembl chr10:95,120,487...95,139,025
JBrowse link
G Prkcb protein kinase C, beta IDA RGD PMID:12665248 RGD:1625515 NCBI chr 1:186,263,397...186,594,743
Ensembl chr 1:186,263,447...186,594,740
JBrowse link
G Prkcd protein kinase C, delta IEP
ISO
protein:altered localization:nucleus
associated with Obesity;protein:increased activity:adipocyte
RGD PMID:12217885 PMID:15507533 RGD:729667, RGD:1642527 NCBI chr16:5,775,681...5,806,122
Ensembl chr16:5,775,681...5,805,839
JBrowse link
G Prkcq protein kinase C, theta IEP associated with Obesity;protein:decreased expression:skeletal muscle
protein:altered localization:skeletal muscle
RGD PMID:10923637 PMID:9000691 RGD:1625603, RGD:1625604 NCBI chr17:72,156,215...72,288,508
Ensembl chr17:72,156,215...72,288,508
JBrowse link
G Prkcz protein kinase C, zeta ISO RGD PMID:12882908 RGD:1642650 NCBI chr 5:171,101,774...171,212,694
Ensembl chr 5:171,101,774...171,212,674
JBrowse link
G Prkd1 protein kinase D1 susceptibility ISO human gene in a mouse model RGD PMID:25173922 RGD:307436943 NCBI chr 6:73,460,640...73,774,433
Ensembl chr 6:73,460,640...73,836,509
JBrowse link
G Prl prolactin ISO associated with Hyperprolactinemia RGD PMID:3888755 RGD:1642560 NCBI chr17:38,287,355...38,298,234
Ensembl chr17:38,288,162...38,298,217
JBrowse link
G Prmt7 protein arginine methyltransferase 7 ISO ClinVar Annotator: match by term: Insulin resistance ClinVar PMID:25741868 PMID:26437029 PMID:27718516 PMID:28492532 PMID:28902392 NCBI chr19:51,020,596...51,071,401
Ensembl chr19:51,020,512...51,072,424
JBrowse link
G Pten phosphatase and tensin homolog IDA
ISO
protein:increased expression, decreased acetylation:liver
protein:increased activity:liver (human)
CTD Direct Evidence: marker/mechanism
CTD
RGD
PMID:18303120 PMID:18385463 PMID:24367090 RGD:2292521, RGD:127285595 NCBI chr 1:240,043,707...240,110,330
Ensembl chr 1:240,043,707...240,110,330
JBrowse link
G Ptgds prostaglandin D2 synthase susceptibility ISO RGD PMID:15970590 RGD:1642581 NCBI chr 3:28,680,044...28,682,978
Ensembl chr 3:28,680,044...28,682,978
JBrowse link
G Ptgis prostaglandin I2 synthase IEP protein:decreased activity:aorta (rat) RGD PMID:16528409 RGD:401960098 NCBI chr 3:176,347,589...176,383,251
Ensembl chr 3:176,335,437...176,407,650
JBrowse link
G Ptk2b protein tyrosine kinase 2 beta ISO associated with Obesity RGD PMID:16039993 RGD:1642605 NCBI chr15:44,536,275...44,656,754
Ensembl chr15:44,531,249...44,656,806
JBrowse link
G Ptpn1 protein tyrosine phosphatase, non-receptor type 1 ISO
IEP
DNA:insertion:3'utr:1484insG
associated with congestive heart failure;protein:increased expression, increased activity:heart (rat)
CTD Direct Evidence: marker/mechanism
ClinVar Annotator: match by term: Insulin resistance, susceptibility to
CTD
ClinVar
RGD
PMID:10744717 PMID:11833006 PMID:11833006 PMID:29929988 RGD:1625240, RGD:401965403 NCBI chr 3:177,056,588...177,106,424
Ensembl chr 3:177,057,659...177,106,416
JBrowse link
G Ptprf protein tyrosine phosphatase, receptor type, F ISO mouse model overexpressing human transgene RGD PMID:11309481 PMID:9218523 RGD:1642735, RGD:1642733 NCBI chr 5:137,027,376...137,109,405
Ensembl chr 5:137,028,164...137,095,426
JBrowse link
G Pyy peptide YY ISO protein:decreased expression RGD PMID:17045646 RGD:1625281 NCBI chr10:87,561,347...87,562,470
Ensembl chr10:87,561,353...87,562,206
JBrowse link
G Rb1 RB transcriptional corepressor 1 ISO mRNA:decreased expression:adipose tissue RGD PMID:23315497 RGD:8547988 NCBI chr15:54,780,858...54,911,989
Ensembl chr15:54,780,858...54,911,857
JBrowse link
G Rbp4 retinol binding protein 4 disease_progression
ameliorates
ISO
IEP
protein:decreased expression:blood serum (human) RGD PMID:29747616 PMID:21365528 RGD:329849113, RGD:329853304 NCBI chr 1:245,306,349...245,313,551
Ensembl chr 1:245,306,349...245,313,898
JBrowse link
G Rela RELA proto-oncogene, NF-kB subunit ISO
IEP
protein:altered localization:soleus RGD PMID:18198644 PMID:18073321 RGD:2298857, RGD:2298860 NCBI chr 1:212,354,336...212,364,815
Ensembl chr 1:212,333,035...212,364,817
JBrowse link
G Retn resistin ISO CTD Direct Evidence: marker/mechanism CTD
RGD
PMID:16493877 PMID:18789551 RGD:2313499 NCBI chr12:6,508,653...6,511,115
Ensembl chr12:6,508,801...6,511,116
JBrowse link
G Rrad RRAD, Ras related glycolysis inhibitor and calcium channel regulator ISO RGD PMID:16537411 RGD:2311703 NCBI chr19:360,581...363,874
Ensembl chr19:360,973...363,871
JBrowse link
G Scd stearoyl-CoA desaturase treatment ISO
IEP
CTD Direct Evidence: therapeutic CTD
RGD
PMID:21661758 PMID:26394137 RGD:329955565 NCBI chr 1:253,218,968...253,232,101
Ensembl chr 1:253,218,970...253,231,785
JBrowse link
G Selenop selenoprotein P ISO CTD Direct Evidence: marker/mechanism CTD PMID:14714311 NCBI chr 2:54,225,736...54,236,022
Ensembl chr 2:54,225,152...54,236,019
JBrowse link
G Serpina1 serpin family A member 1 ISO RGD PMID:16752182 RGD:1601202 NCBI chr 6:128,631,101...128,653,125
Ensembl chr 6:128,619,382...128,660,703
JBrowse link
G Serpine1 serpin family E member 1 treatment IEP
IDA
mRNA:increased expression:white adipose tissue (rat) RGD PMID:19776253 PMID:26188590 RGD:8547949, RGD:11073726 NCBI chr12:25,237,977...25,248,356
Ensembl chr12:25,237,952...25,248,357
JBrowse link
G Serpinf1 serpin family F member 1 treatment ISO
IDA
associated with Hypertension
human protein in a rat model
RGD PMID:19073347 PMID:22714715 PMID:24288442 RGD:2312339, RGD:8655563, RGD:8642993 NCBI chr10:60,748,504...60,760,898
Ensembl chr10:60,748,506...60,760,898
JBrowse link
G Shc1 SHC adaptor protein 1 ISO mRNA:increased expression:adipose tissue RGD PMID:17986714 RGD:1643171 NCBI chr 2:177,135,649...177,147,257
Ensembl chr 2:177,135,659...177,147,914
JBrowse link
G Si sucrase-isomaltase IEP associated with Diabetes Mellitus, Type 2;mRNA:increased expression:small intestine RGD PMID:9878708 RGD:1625544 NCBI chr 2:157,505,893...157,586,228
Ensembl chr 2:159,804,568...159,883,934
JBrowse link
G Sirt1 sirtuin 1 treatment IDA
ISO
associated with Obesity
CTD Direct Evidence: marker/mechanism|therapeutic
CTD
RGD
PMID:20068143 PMID:21321189 PMID:24442997 PMID:25849131 PMID:26026874 More... RGD:9585759 NCBI chr20:25,305,953...25,328,000
Ensembl chr20:25,305,476...25,328,000
JBrowse link
G Sirt4 sirtuin 4 IEP RGD PMID:20651844 RGD:9586052 NCBI chr12:46,785,852...46,800,179
Ensembl chr12:46,791,898...46,800,173
JBrowse link
G Slc27a1 solute carrier family 27 member 1 IDA protein::heart:basal level increased but unresponsive to insulin on a high cholesterol, high fructose diet RGD PMID:17400720 RGD:1642795 NCBI chr16:18,278,984...18,300,173
Ensembl chr16:18,313,015...18,330,045
JBrowse link
G Slc27a4 solute carrier family 27 member 4 ISO mRNA:increased expression:subcutaneous adipose tissue RGD PMID:15168018 RGD:1625638 NCBI chr 3:13,075,022...13,087,943
Ensembl chr 3:33,472,903...33,485,824
JBrowse link
G Slc2a3 solute carrier family 2 member 3 ISO RGD PMID:11436180 RGD:1642802 NCBI chr 4:157,632,887...157,698,034
Ensembl chr 4:157,632,887...157,646,186
JBrowse link
G Slc2a4 solute carrier family 2 member 4 ISO associated with Heart Failure, Congestive;protein:decreased expression:skeletal muscle
CTD Direct Evidence: therapeutic
CTD
RGD
PMID:11947963 PMID:18778861 RGD:2313624 NCBI chr10:55,164,721...55,170,289
Ensembl chr10:55,164,721...55,170,270
JBrowse link
G Socs1 suppressor of cytokine signaling 1 ISO associated with Diabetes Mellitus RGD PMID:15240880 RGD:1625677 NCBI chr10:5,389,574...5,391,265
Ensembl chr10:5,389,334...5,391,847
JBrowse link
G Socs3 suppressor of cytokine signaling 3 susceptibility ISO associated with Diabetes Mellitus
associated with Obesity
RGD PMID:15240880 PMID:17295835 RGD:1625677, RGD:2313789 NCBI chr10:103,692,579...103,695,975
Ensembl chr10:103,690,976...103,704,825
JBrowse link
G Sod2 superoxide dismutase 2 ISO CTD Direct Evidence: therapeutic CTD PMID:22829583 NCBI chr 1:50,043,323...50,050,168
Ensembl chr 1:50,043,325...50,050,168
JBrowse link
G Sod3 superoxide dismutase 3 ISO associated with Diabetes Mellitus, Type 2;protein:increased expression:plasma RGD PMID:15171689 RGD:1625698 NCBI chr14:62,822,865...62,828,602
Ensembl chr14:62,811,177...62,829,125
JBrowse link
G Sorbs1 sorbin and SH3 domain containing 1 susceptibility ISO RGD PMID:17351624 RGD:1642731 NCBI chr 1:239,107,882...239,330,276
Ensembl chr 1:249,057,324...249,279,608
JBrowse link
G Sox6 SRY-box transcription factor 6 ISO RGD PMID:16148004 RGD:1581307 NCBI chr 1:169,723,306...170,334,846
Ensembl chr 1:179,163,566...179,711,727
JBrowse link
G Sqstm1 sequestosome 1 ISO CTD Direct Evidence: therapeutic CTD PMID:33933676 NCBI chr10:35,026,598...35,037,750
Ensembl chr10:35,026,598...35,037,750
JBrowse link
G Srebf1 sterol regulatory element binding transcription factor 1 susceptibility
treatment
ISO
IEP
associated with Diabetes Mellitus, Non-Insulin-Dependent;DNA:SNP
CTD Direct Evidence: marker/mechanism
associated with Fatty Liver;mRNA:increased expression:liver
CTD
RGD
PMID:22658938 PMID:18692268 PMID:26394137 PMID:17241878 RGD:2308809, RGD:329955565, RGD:2308807 NCBI chr10:45,507,152...45,529,164
Ensembl chr10:45,507,152...45,529,164
JBrowse link
G Srebf1_v2 sterol regulatory element binding factor 1, variant 2 IEP associated with Fatty Liver;mRNA:increased expression:liver RGD PMID:17241878 RGD:2308807
G Srebf2 sterol regulatory element binding transcription factor 2 ISO CTD Direct Evidence: marker/mechanism CTD PMID:20699619 NCBI chr 7:115,542,774...115,600,945
Ensembl chr 7:115,543,290...115,600,943
JBrowse link
G Stk11 serine/threonine kinase 11 IEP associated with obesity;protein:decreased expression:gastrocnemius RGD PMID:16352671 RGD:1601389 NCBI chr 7:10,225,204...10,241,965
Ensembl chr 7:10,225,204...10,241,965
JBrowse link
G Sts steroid sulfatase ISO CTD Direct Evidence: therapeutic CTD PMID:24497646 NCBI chr  X:46,102,524...46,110,868
Ensembl chr  X:46,102,548...46,111,104
JBrowse link
G Syn1 synapsin I IEP RGD PMID:29566703 RGD:13542091 NCBI chr  X:1,172,208...1,227,400
Ensembl chr  X:3,725,714...3,780,938
JBrowse link
G Tbc1d4 TBC1 domain family, member 4 ISO ClinVar Annotator: match by term: Insulin resistance ClinVar NCBI chr15:84,670,756...84,848,876
Ensembl chr15:84,670,756...84,848,693
JBrowse link
G Tcf7l2 transcription factor 7 like 2 ISO DNA:SNP (human) RGD PMID:19509102 RGD:2312433 NCBI chr 1:264,791,335...264,984,225
Ensembl chr 1:264,791,335...264,984,225
JBrowse link
G Tf transferrin IEP protein:increased expression:plasma RGD PMID:17350134 RGD:1601515 NCBI chr 8:112,668,667...112,695,376
Ensembl chr 8:112,647,642...112,695,400
JBrowse link
G Tfap2b transcription factor AP-2 beta ISO RGD PMID:16373417 RGD:1601544 NCBI chr 9:29,282,703...29,312,568
Ensembl chr 9:29,282,825...29,312,568
JBrowse link
G Thbd thrombomodulin ISO associated with Diabetes Mellitus, Non-Insulin-Dependent RGD PMID:11453033 RGD:2312460 NCBI chr 3:156,316,526...156,320,178
Ensembl chr 3:156,306,632...156,320,582
JBrowse link
G Tlr4 toll-like receptor 4 severity ISO associated with Obesity
protein:increased expression:skeletal muscle
RGD PMID:19675137 PMID:17426960 PMID:18633101 RGD:2312483, RGD:1620681, RGD:2312489 NCBI chr 5:85,161,247...85,174,882
Ensembl chr 5:85,161,192...85,175,007
JBrowse link
G Tnf tumor necrosis factor treatment IDA
IMP
ISO
IEP
associated with obesity
CTD Direct Evidence: marker/mechanism
associated with Obesity
CTD
RGD
PMID:16493877 PMID:20943792 PMID:14764603 PMID:9832430 PMID:25016878 RGD:1580214, RGD:14995428, RGD:10450578 NCBI chr20:3,626,685...3,629,303
Ensembl chr20:3,626,532...3,629,303
JBrowse link
G Tnfrsf11b TNF receptor superfamily member 11B ISO associated with obesity;protein:increased expression:serum RGD PMID:15936463 RGD:1620889 NCBI chr 7:87,456,318...87,484,324
Ensembl chr 7:87,456,319...87,485,075
JBrowse link
G Tnfrsf1a TNF receptor superfamily member 1A ISO associated with Diabetes Mellitus, Non-Insulin-Dependent;protein:decreased expression RGD PMID:11882518 RGD:1624180 NCBI chr 4:159,837,119...159,849,817
Ensembl chr 4:159,837,032...159,849,816
JBrowse link
G Trib3 tribbles pseudokinase 3 ISO CTD Direct Evidence: marker/mechanism CTD PMID:20461355 NCBI chr 3:161,269,939...161,275,533
Ensembl chr 3:161,269,955...161,274,802
JBrowse link
G Tsc1 TSC complex subunit 1 ISO RGD PMID:15380067 RGD:1624197 NCBI chr 3:32,367,434...32,416,565
Ensembl chr 3:32,367,670...32,416,568
JBrowse link
G Ucp1 uncoupling protein 1 ISO associated with Diabetes Mellitus, Non-Insulin-Dependent;DNA:SNP:5' utr:-112A>C (rs10011540) (human) RGD PMID:16338218 RGD:1624979 NCBI chr19:41,713,350...41,721,421
Ensembl chr19:41,713,351...41,721,420
JBrowse link
G Ucp2 uncoupling protein 2 ISO DNA:polymorphism, insertion:promoter:-866G>A (rs659366)(human) RGD PMID:17870627 RGD:2313512 NCBI chr 1:164,251,373...164,257,742
Ensembl chr 1:164,251,373...164,257,743
JBrowse link
G Ucp3 uncoupling protein 3 ISO DNA:polymorphism:promoter:-55C>T (human) RGD PMID:17870627 PMID:17571165 RGD:2313512, RGD:2313515 NCBI chr 1:164,227,910...164,240,893
Ensembl chr 1:164,227,882...164,241,210
JBrowse link
G Vcam1 vascular cell adhesion molecule 1 ISO RGD PMID:11882338 RGD:1580351 NCBI chr 2:206,723,050...206,742,783
Ensembl chr 2:206,723,044...206,742,801
JBrowse link
G Vdr vitamin D receptor ISO RGD PMID:25801026 RGD:14402022 NCBI chr 7:130,864,764...130,916,757
Ensembl chr 7:130,866,745...130,916,757
JBrowse link
G Vwf von Willebrand factor ISO protein:increased expression:plasma RGD PMID:16631442 PMID:15939060 RGD:1625711, RGD:617154592 NCBI chr 4:160,042,900...160,177,757
Ensembl chr 4:160,047,982...160,177,757
JBrowse link
G Xbp1 X-box binding protein 1 treatment ISO
IEP
CTD Direct Evidence: therapeutic CTD
RGD
PMID:27325692 PMID:15486293 PMID:26394137 RGD:2326004, RGD:329955565 NCBI chr14:84,604,623...84,609,707
Ensembl chr14:84,604,107...84,609,706
JBrowse link
G Zc3h10 zinc finger CCCH type containing 10 ISO CTD Direct Evidence: therapeutic CTD PMID:31775033 NCBI chr 7:1,557,948...1,562,129
Ensembl chr 7:1,550,764...1,564,332
JBrowse link
Insulin-Resistant Diabetes Mellitus, with Acanthosis Nigricans term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Insr insulin receptor ISO ClinVar Annotator: match by term: DIABETES MELLITUS, INSULIN-RESISTANT, WITH ACANTHOSIS NIGRICANS, TYPE A | ClinVar Annotator: match by term: IRAN, TYPE A
CTD Direct Evidence: marker/mechanism
OMIM
ClinVar
CTD
PMID:1644241 PMID:1963473 PMID:1971035 PMID:2002058 PMID:2040394 More... NCBI chr12:5,991,135...6,129,275
Ensembl chr12:5,981,835...6,128,803
JBrowse link
G Lmna lamin A/C ISO ClinVar Annotator: match by term: IRAN, TYPE A ClinVar PMID:15919811 PMID:16478798 PMID:20848652 PMID:23785128 PMID:24033266 More... NCBI chr 2:176,237,564...176,265,301
Ensembl chr 2:176,237,564...176,288,072
JBrowse link
insulinoma term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adm adrenomedullin ISO protein:increased expression:pancreas, plasma RGD PMID:11331218 RGD:2325319 NCBI chr 1:174,164,178...174,182,372
Ensembl chr 1:174,178,773...174,182,371
JBrowse link
G Btc betacellulin ISO protein:increased expression:pancreas RGD PMID:10724350 RGD:2326087 NCBI chr14:16,992,668...17,031,178
Ensembl chr14:16,992,193...17,033,078
JBrowse link
G Cd40 CD40 molecule ISO RGD PMID:17982058 RGD:5491180 NCBI chr 3:174,209,113...174,224,592
Ensembl chr 3:174,209,719...174,224,847
JBrowse link
G Cux1 cut-like homeobox 1 disease_progression
exacerbates
ISO mRNA:increased expression:pancreas (mouse)
protein:increased expression:pancreas (human)
RGD PMID:25248790 PMID:25248790 RGD:152985543, RGD:152985543 NCBI chr12:25,728,393...26,062,497
Ensembl chr12:25,743,733...26,062,497
JBrowse link
G Cxcl12 C-X-C motif chemokine ligand 12 ISO protein:increased expression:pancreas RGD PMID:19013212 RGD:2317608 NCBI chr 4:152,060,781...152,073,628
Ensembl chr 4:152,060,780...152,073,627
JBrowse link
G Ins2 insulin 2 ISO protein:altered expression:blood
protein:altered localization:pancreas
RGD PMID:8175958 PMID:2565624 RGD:2317266, RGD:2317268 NCBI chr 1:207,272,738...207,421,998
Ensembl chr 1:207,272,742...207,273,805
JBrowse link
G Men1 menin 1 disease_progression ISO DNA:deletion:exon
CTD Direct Evidence: marker/mechanism
DNA:deletions:exons
CTD
RGD
PMID:17961653 PMID:12941803 PMID:20138042 PMID:19208834 RGD:2317292, RGD:2317288, RGD:2317310 NCBI chr 1:213,068,166...213,074,132
Ensembl chr 1:213,068,166...213,074,120
JBrowse link
G Ncam1 neural cell adhesion molecule 1 ISO protein:increased expression:pancreas RGD PMID:8972754 RGD:2326080 NCBI chr 8:58,762,088...59,062,131
Ensembl chr 8:58,762,116...59,061,971
JBrowse link
G Rps15 ribosomal protein S15 IEP RGD PMID:3019805 RGD:61740 NCBI chr 7:10,066,572...10,068,167
Ensembl chr 7:10,066,677...10,068,123
JBrowse link
G Slc2a2 solute carrier family 2 member 2 ISO protein:increased expression:pancreatic B cell
mRNA:decreased expression:pancreatic islet
RGD PMID:12114701 PMID:8421107 RGD:2324976, RGD:2324977 NCBI chr 2:113,537,884...113,568,422
Ensembl chr 2:113,537,972...113,568,467
JBrowse link
G Tgfa transforming growth factor alpha ISO protein:increased expression:pancreas RGD PMID:8712689 RGD:2317472 NCBI chr 4:120,175,549...120,258,342
Ensembl chr 4:120,175,593...120,258,339
JBrowse link
G Tgfb1 transforming growth factor, beta 1 ISO mRNA, protein:decreased expression:pancreatic islet RGD PMID:18058603 RGD:2325017 NCBI chr 1:90,324,312...90,340,627
Ensembl chr 1:90,324,046...90,340,899
JBrowse link
Islet Cell Adenomatosis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mafa MAF bZIP transcription factor A ISO ClinVar Annotator: match by term: Islet cell adenomatosis OMIM
ClinVar
PMID:25741868 PMID:29339498 PMID:35406570 NCBI chr 7:109,313,021...109,315,813
Ensembl chr 7:109,313,121...109,315,760
JBrowse link
islet cell tumor term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atrx ATRX, chromatin remodeler disease_progression ISO protein:decreased expression:pancreas: RGD PMID:24148618 RGD:9586032 NCBI chr  X:74,916,548...75,062,880
Ensembl chr  X:74,916,548...75,062,880
JBrowse link
G Cdk4 cyclin-dependent kinase 4 ISO protein:increased expression:pancreas, islet of Langerhans (human) RGD PMID:22761470 RGD:13452384 NCBI chr 7:64,771,453...64,774,891
Ensembl chr 7:64,771,147...64,775,163
JBrowse link
G Daxx death-domain associated protein disease_progression ISO RGD PMID:21252315 RGD:9587819 NCBI chr20:4,971,973...4,978,062
Ensembl chr20:4,971,941...4,977,720
JBrowse link
G Pcsk1 proprotein convertase subtilisin/kexin type 1 IEP protein:increased expression:insulinoma (rat) RGD PMID:7925129 RGD:2308920 NCBI chr 2:6,130,045...6,176,974
Ensembl chr 2:6,129,592...6,176,974
JBrowse link
Johanson-Blizzard syndrome term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ubr1 ubiquitin protein ligase E3 component n-recognin 1 ISO
ISS
ClinVar Annotator: match by term: Johanson-Blizzard syndrome | ClinVar Annotator: match by term: Nasal alar hypoplasia, hypothyroidism, pancreatic achylia and congenital deafness | ClinVar Annotator: match by term: UBR1-related condition
CTD Direct Evidence: marker/mechanism
OMIM:243800
DNA:mutation:exon:exon 15, c.1759C>T, p.Q587X (human)
DNA:splice-site mutation:cds:IVS26+5G>A (human)
OMIM
ClinVar
CTD
MouseDO
RGD
PMID:16311597 PMID:18553553 PMID:19006206 PMID:19058315 PMID:20556423 More... RGD:155882463, RGD:155882462 NCBI chr 3:107,813,721...107,921,701
Ensembl chr 3:128,265,115...128,375,671
JBrowse link
leucine-sensitive hypoglycemia of infancy term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abcc8 ATP binding cassette subfamily C member 8 ISO ClinVar Annotator: match by term: LEUCINE-SENSITIVE HYPOGLYCEMIA OF INFANCY | ClinVar Annotator: match by term: Leucine-induced hypoglycemia | ClinVar Annotator: match by term: Leucine-sensitive hypoglycemia of infancy
CTD Direct Evidence: marker/mechanism
OMIM
ClinVar
CTD
PMID:7716548 PMID:7908292 PMID:8650576 PMID:8923011 PMID:9382893 More... NCBI chr 1:105,734,992...105,816,272
Ensembl chr 1:105,734,992...105,815,982
JBrowse link
G Kcnj11 potassium inwardly-rectifying channel, subfamily J, member 11 ISO ClinVar Annotator: match by term: Leucine-induced hypoglycemia ClinVar PMID:16885549 PMID:17466004 PMID:25741868 PMID:28492532 NCBI chr 1:105,727,473...105,731,167
Ensembl chr 1:105,727,570...105,731,169
JBrowse link
Mahvash disease term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gcgr glucagon receptor ISO
ISS
ClinVar Annotator: match by term: GCGR-related condition | ClinVar Annotator: match by term: GCGR-related hyperglucagonemia OMIM
ClinVar
MouseDO
PMID:19657311 PMID:25695890 PMID:25741868 PMID:27933176 PMID:28492532 More... NCBI chr10:106,306,803...106,314,970
Ensembl chr10:106,306,559...106,314,969
JBrowse link
Meckel syndrome 7 term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nphp3 nephrocystin 3 ISO ClinVar Annotator: match by term: GOLDSTON SYNDROME | ClinVar Annotator: match by term: Meckel syndrome type 7
CTD Direct Evidence: marker/mechanism
OMIM
ClinVar
CTD
PMID:9536098 PMID:12872122 PMID:16199547 PMID:17576681 PMID:17855640 More... NCBI chr 8:113,500,708...113,541,179
Ensembl chr 8:113,500,509...113,541,179
JBrowse link
Melanoma-Pancreatic Cancer Syndrome term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cdkn2a cyclin-dependent kinase inhibitor 2A ISO ClinVar Annotator: match by term: Melanoma-pancreatic cancer syndrome
CTD Direct Evidence: marker/mechanism
OMIM
ClinVar
CTD
PMID:203 PMID:945228 PMID:2319082 PMID:2813514 PMID:7566978 More... NCBI chr 5:109,100,763...109,114,448
Ensembl chr 5:109,100,772...109,119,248
JBrowse link
Metabolic Syndrome term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abca1 ATP binding cassette subfamily A member 1 susceptibility ISO DNA:SNP:exon:p.R230C (rs9282541) (human) RGD PMID:17287470 RGD:1601092 NCBI chr 5:72,473,676...72,596,563
Ensembl chr 5:72,473,676...72,596,473
JBrowse link
G Acaca acetyl-CoA carboxylase alpha ameliorates ISO
IEP
mRNA:increased expression:liver (mouse) RGD PMID:29684438 PMID:27821167 RGD:329333017, RGD:401799622 NCBI chr10:69,511,627...69,773,888
Ensembl chr10:69,511,857...69,773,888
JBrowse link
G Acacb acetyl-CoA carboxylase beta ISO mRNA:increased expression:liver (mouse) RGD PMID:29684438 RGD:329333017 NCBI chr12:48,026,394...48,138,214
Ensembl chr12:48,026,394...48,138,214
JBrowse link
G Acadvl acyl-CoA dehydrogenase, very long chain treatment IDA RGD PMID:25191539 RGD:10047118 NCBI chr10:55,231,558...55,236,786
Ensembl chr10:55,231,440...55,236,750
JBrowse link
G Acat2 acetyl-CoA acetyltransferase 2 susceptibility ISO DNA:polymorphism RGD PMID:14557872 RGD:1581921 NCBI chr 1:50,100,840...50,118,886
Ensembl chr 1:50,100,817...50,135,095
JBrowse link
G Adipoq adiponectin, C1Q and collagen domain containing ISO associated with Diabetes Mellitus, Non-Insulin-Dependent;DNA:SNP: :276G>T (human)
CTD Direct Evidence: marker/mechanism
associated with vascular diseases; protein:decreased expression:plasma
protein:decreased expression:serum
CTD
RGD
PMID:16793964 PMID:17618945 PMID:18162013 PMID:20833989 PMID:19690575 More... RGD:2313234, RGD:5686800, RGD:5686428, RGD:5686407 NCBI chr11:91,226,524...91,240,244
Ensembl chr11:91,226,180...91,240,169
JBrowse link
G Adrb2 adrenoceptor beta 2 susceptibility ISO DNA:polymorphisms: :p.R16G, p.Q27E RGD
GAD
PMID:14557466 PMID:15118671 RGD:1601127, RGD:1331525 NCBI chr18:57,912,760...57,914,802
Ensembl chr18:57,911,348...57,914,803
JBrowse link
G Agt angiotensinogen IEP mRNA, protein:increased expression:adipose tissue RGD PMID:17260464 RGD:1601134 NCBI chr19:69,426,540...69,447,017
Ensembl chr19:69,421,638...69,446,944
JBrowse link
G Agtr1a angiotensin II receptor, type 1a susceptibility ISO DNA:snp:3' utr:c.5186A>C RGD PMID:17211857 RGD:1601146 NCBI chr17:34,383,397...34,435,523
Ensembl chr17:34,381,467...34,435,660
JBrowse link
G Akp3 alkaline phosphatase 3, intestine, not Mn requiring ISO RGD PMID:23569246 RGD:14349049 NCBI chr 9:87,804,680...87,808,715
Ensembl chr 9:95,248,840...95,256,616
JBrowse link
G Aldoa aldolase, fructose-bisphosphate A IEP mRNA:increased expression:aorta RGD PMID:21890532 RGD:13673877 NCBI chr 1:190,832,820...190,838,021
Ensembl chr 1:190,832,820...190,838,211
JBrowse link
G Alpl alkaline phosphatase, biomineralization associated susceptibility ISO protein:increased expression:serum RGD PMID:16249437 RGD:1601174 NCBI chr 5:155,234,770...155,289,785
Ensembl chr 5:155,234,775...155,254,167
JBrowse link
G Alpp alkaline phosphatase, placental ISO RGD PMID:23569246 RGD:14349049 NCBI chr 9:87,765,846...87,768,606
Ensembl chr 9:95,213,374...95,219,451
JBrowse link
G Apoa1 apolipoprotein A1 ISO protein:decreased expression:serum (human)
DNA: polymorphism: :G2, G3 and G5
RGD PMID:17217166 PMID:21410987 RGD:1601183, RGD:5508220 NCBI chr 8:55,423,945...55,425,729
Ensembl chr 8:55,423,825...55,425,729
JBrowse link
G Apoa2 apolipoprotein A2 ISO protein:decreased expression:serum RGD PMID:19817643 RGD:2313955 NCBI chr13:83,644,460...83,646,358
Ensembl chr13:86,174,741...86,179,410
JBrowse link
G Apoa5 apolipoprotein A5 susceptibility ISO DNA:polymorphism: :p.S19W (human) RGD PMID:18789138 RGD:2313315 NCBI chr 8:55,446,329...55,460,509
Ensembl chr 8:55,456,899...55,460,507
JBrowse link
G Apob apolipoprotein B ISO protein:increased expression:plasma RGD PMID:16828905 RGD:1601198 NCBI chr 6:36,563,704...36,603,300
Ensembl chr 6:36,563,704...36,611,814
JBrowse link
G Apoc3 apolipoprotein C3 susceptibility ISO protein:increased expression:serum (human)
DNA:polymorphism:promoter:-482C>T, -455T>C
RGD PMID:16298371 PMID:17416293 RGD:2306766, RGD:1601223 NCBI chr 8:55,428,172...55,430,352
Ensembl chr 8:55,428,024...55,458,679
JBrowse link
G Apom apolipoprotein M ISO protein:decreased expression:plasma RGD PMID:19539616 RGD:2314236 NCBI chr20:3,695,618...3,698,218
Ensembl chr20:3,692,737...3,698,218
JBrowse link
G Atm ATM serine/threonine kinase ISO RGD PMID:17084711 RGD:1601248 NCBI chr 8:62,724,939...62,829,040
Ensembl chr 8:62,727,291...62,828,629
JBrowse link
G Atp12a ATPase H+/K+ transporting non-gastric alpha2 subunit IEP RGD PMID:23320804 RGD:13838660 NCBI chr15:34,559,209...34,583,866
Ensembl chr15:34,559,209...34,583,866
JBrowse link
G Bche butyrylcholinesterase ISO protein:increased expression:serum RGD PMID:15907830 RGD:1601317 NCBI chr 2:160,607,289...160,699,760
Ensembl chr 2:160,606,288...160,699,760
JBrowse link
G Bdnf brain-derived neurotrophic factor ISO RGD PMID:11935372 RGD:1580935 NCBI chr 3:116,619,633...116,670,212
Ensembl chr 3:116,619,633...116,670,657
JBrowse link
G Bglap bone gamma-carboxyglutamate protein ISO protein:decreased expression:serum RGD PMID:21760737 RGD:6483594 NCBI chr 2:176,136,341...176,137,318
Ensembl chr 2:176,136,341...176,137,318
JBrowse link
G C3 complement C3 ISO RGD PMID:16488421 RGD:2314030 NCBI chr 9:2,174,412...2,201,339
Ensembl chr 9:2,174,412...2,201,339
JBrowse link
G Capn10 calpain 10 ISO DNA:polymorphism RGD PMID:16546286 RGD:1625050 NCBI chr 9:100,943,665...100,957,910
Ensembl chr 9:100,945,551...100,957,912
JBrowse link
G Cck cholecystokinin ISO RGD PMID:17443025 RGD:1625798 NCBI chr 8:130,031,012...130,037,702
Ensembl chr 8:130,031,013...130,037,686
JBrowse link
G Ccl2 C-C motif chemokine ligand 2 ISO CTD Direct Evidence: marker/mechanism CTD PMID:16188961 PMID:18486454 NCBI chr10:67,503,077...67,504,875
Ensembl chr10:67,503,077...67,504,875
JBrowse link
G Ccl5 C-C motif chemokine ligand 5 IEP protein:increased secretion:plasma (rat) RGD PMID:19905967 RGD:4889977 NCBI chr10:68,820,330...68,824,906
Ensembl chr10:68,738,651...68,824,884
JBrowse link
G Cd163 CD163 molecule susceptibility ISO protein:increased expression:blood serum (human) RGD PMID:31027316 RGD:127345132 NCBI chr 4:158,770,751...158,804,146
Ensembl chr 4:158,770,749...158,804,146
JBrowse link
G Cd36 CD36 molecule ISO
IAGP
DNA:SNPs: :multiple (human) RGD PMID:18305138 PMID:9916795 RGD:2307208, RGD:619666 NCBI chr 4:18,209,088...18,302,142 JBrowse link
G Cd40lg CD40 ligand ISO protein:increased expression:serum RGD PMID:16423632 PMID:20006362 RGD:2314214, RGD:5490591 NCBI chr  X:140,164,341...140,176,057
Ensembl chr  X:140,164,302...140,176,475
JBrowse link
G Cela2a chymotrypsin like elastase 2A ISO CTD Direct Evidence: marker/mechanism CTD PMID:31358993 NCBI chr 5:154,126,879...154,136,630
Ensembl chr 5:159,409,899...159,426,208
JBrowse link
G Chek2 checkpoint kinase 2 IEP mRNA:increased expression:heart left ventricle (rat) RGD PMID:25129990 RGD:10400905 NCBI chr12:51,448,838...51,481,159
Ensembl chr12:51,449,140...51,480,667
JBrowse link
G Ciita class II, major histocompatibility complex, transactivator ISO DNA:polymorphism:promoter:-168A>G (human) RGD PMID:17183695 RGD:5491201 NCBI chr10:5,646,854...5,694,393
Ensembl chr10:5,647,085...5,694,342
JBrowse link
G Crp C-reactive protein ISO CTD Direct Evidence: marker/mechanism CTD
RGD
PMID:16644639 PMID:21357282 RGD:6482318 NCBI chr13:87,694,062...87,695,978
Ensembl chr13:87,657,317...87,707,514
JBrowse link
G Cst3 cystatin C ISO protein:increased expression:serum (human) RGD PMID:19887833 RGD:2314295 NCBI chr 3:156,790,061...156,794,116
Ensembl chr 3:156,790,079...156,793,937
JBrowse link
G Cyba cytochrome b-245 alpha chain IEP RGD PMID:16741160 RGD:2317864 NCBI chr19:67,396,143...67,404,214
Ensembl chr19:67,396,143...67,404,214
JBrowse link
G Cyp11b2 cytochrome P450, family 11, subfamily b, polypeptide 2 susceptibility ISO DNA:polymorphism:promoter:-344C>T (human) RGD PMID:17261471 RGD:2307294 NCBI chr 7:108,719,349...108,726,024
Ensembl chr 7:108,719,349...108,725,763
JBrowse link
G Cyp11b3 cytochrome P450, family 11, subfamily b, polypeptide 3 susceptibility ISO DNA:polymorphism:promoter:-344C>T (human) RGD PMID:17261471 RGD:2307294 NCBI chr 7:108,689,319...108,694,808
Ensembl chr 7:108,689,165...108,694,921
JBrowse link
G Cyp7a1 cytochrome P450 family 7 subfamily A member 1 ameliorates ISO RGD PMID:31353547 RGD:401850595 NCBI chr 5:24,174,505...24,184,202
Ensembl chr 5:24,174,505...24,184,202
JBrowse link
G Ddr1 discoidin domain receptor tyrosine kinase 1 ISO RGD PMID:32360427 RGD:151347874 NCBI chr20:3,047,269...3,069,277
Ensembl chr20:3,050,375...3,069,276
JBrowse link
G Dgat1 diacylglycerol O-acyltransferase 1 treatment ISO RGD PMID:21990351 RGD:10401057 NCBI chr 7:110,104,514...110,119,091
Ensembl chr 7:110,098,906...110,115,016
JBrowse link
G Dio2 iodothyronine deiodinase 2 ISO DNA:polymorphism: :p.T92A (human) RGD PMID:18198294 RGD:2313696 NCBI chr 6:115,396,308...115,410,594
Ensembl chr 6:115,396,308...115,410,594
JBrowse link
G Ephx2 epoxide hydrolase 2 IMP RGD PMID:22007192 RGD:5688391 NCBI chr15:44,465,447...44,503,157
Ensembl chr15:44,465,448...44,503,160
JBrowse link
G F3 coagulation factor III, tissue factor ISO associated with Diabetes Mellitus, Non-Insulin-Dependent RGD PMID:12417540 RGD:2313865 NCBI chr 2:212,511,675...212,523,375
Ensembl chr 2:212,511,680...212,523,369
JBrowse link
G Fabp2 fatty acid binding protein 2 ISO RGD PMID:16919542 RGD:1626401 NCBI chr 2:211,040,032...211,044,089
Ensembl chr 2:213,724,629...213,728,686
JBrowse link
G Fabp4 fatty acid binding protein 4 ISO protein:increased expression:serum RGD PMID:16919044 RGD:1625406 NCBI chr 2:93,488,251...93,492,961
Ensembl chr 2:93,488,271...93,492,972
JBrowse link
G Fadd Fas associated via death domain IEP protein:increased expression:heart left ventricle RGD PMID:23657904 RGD:11344884 NCBI chr 1:209,169,245...209,175,423
Ensembl chr 1:209,169,318...209,174,976
JBrowse link
G Fas Fas cell surface death receptor IEP mRNA:increased expression:liver (rat) RGD PMID:11934685 RGD:628329 NCBI chr 1:241,212,155...241,245,774
Ensembl chr 1:241,205,935...241,246,104
JBrowse link
G Fasn fatty acid synthase ameliorates ISO
IEP
mRNA:increased expression:liver (mouse) RGD PMID:29684438 PMID:31353547 PMID:27821167 RGD:329333017, RGD:401850595, RGD:401799622 NCBI chr10:106,570,415...106,588,581
Ensembl chr10:106,570,413...106,588,583
JBrowse link
G Fgf19 fibroblast growth factor 19 ISO CTD Direct Evidence: marker/mechanism CTD PMID:28673684 NCBI chr 1:209,485,813...209,490,267
Ensembl chr 1:209,485,813...209,490,267
JBrowse link
G Fgf21 fibroblast growth factor 21 treatment ISO RGD PMID:25306889 RGD:10401890 NCBI chr 1:105,219,825...105,221,376
Ensembl chr 1:105,219,825...105,232,056
JBrowse link
G Fto FTO, alpha-ketoglutarate dependent dioxygenase ISO DNA:SNPs: :rs1421085, rs1558902, rs8050136, rs9939609 (human)
DNA:SNP: :rs9939973 (human)
RGD PMID:21796137 PMID:32061761 RGD:329853776, RGD:329901771 NCBI chr19:31,456,749...31,865,011
Ensembl chr19:31,522,293...31,864,957
JBrowse link
G G6pc1 glucose-6-phosphatase catalytic subunit 1 ameliorates IEP RGD PMID:27821167 RGD:401799622 NCBI chr10:86,807,659...86,819,023
Ensembl chr10:86,757,899...86,818,033
JBrowse link
G G6pd glucose-6-phosphate dehydrogenase treatment IEP RGD PMID:19374165 PMID:24868532 RGD:2307350, RGD:10449117 NCBI chr  X:157,352,364...157,372,144
Ensembl chr  X:157,352,373...157,372,144
JBrowse link
G Gcg glucagon ameliorates ISO RGD PMID:31353547 RGD:401850595 NCBI chr 3:67,522,489...67,531,533
Ensembl chr 3:67,522,489...67,531,533
JBrowse link
G Gch1 GTP cyclohydrolase 1 treatment IDA RGD PMID:34200262 RGD:329970293 NCBI chr15:22,884,006...22,917,412
Ensembl chr15:22,884,006...22,917,412
JBrowse link
G Gck glucokinase ameliorates ISO RGD PMID:31353547 RGD:401850595 NCBI chr14:84,999,019...85,041,098
Ensembl chr14:84,999,020...85,040,949
JBrowse link
G Gckr glucokinase regulator ISO RGD PMID:19861489 RGD:7242423 NCBI chr 6:30,765,071...30,795,627
Ensembl chr 6:30,765,075...30,795,627
JBrowse link
G Ggt1 gamma-glutamyltransferase 1 susceptibility ISO RGD PMID:17095717 PMID:24847614 RGD:1601300, RGD:14747015 NCBI chr20:13,074,141...13,103,551
Ensembl chr20:13,074,141...13,088,050
JBrowse link
G Ghrl ghrelin and obestatin prepropeptide ISO DNA:polymorphisms
ClinVar Annotator: match by term: Metabolic syndrome, susceptibility to
In peritoneal dialysis patients
associated with Kidney Diseases;protein:decreased expression:serum
ClinVar
RGD
PMID:11502844 PMID:12050239 PMID:12161552 PMID:16204371 PMID:25741868 More... RGD:1625021, RGD:7242555, RGD:2313748 NCBI chr 4:148,421,315...148,431,128
Ensembl chr 4:148,421,315...148,425,969
JBrowse link
G Gpr17 G protein-coupled receptor 17 ISO CTD Direct Evidence: marker/mechanism CTD PMID:34144038 NCBI chr18:23,850,460...23,857,381
Ensembl chr18:23,850,107...23,857,702
JBrowse link
G Gpx3 glutathione peroxidase 3 ISO protein:increased expression:serum RGD PMID:24819036 RGD:401827122 NCBI chr10:39,529,335...39,537,406
Ensembl chr10:39,529,448...39,537,405
JBrowse link
G Gsn gelsolin severity ISO RGD PMID:29684438 RGD:329333017 NCBI chr 3:38,982,605...39,035,849
Ensembl chr 3:38,982,671...39,035,850
JBrowse link
G Gstm1 glutathione S-transferase mu 1 ISO RGD PMID:29452132 RGD:14700976 NCBI chr 2:198,338,005...198,346,007
Ensembl chr 2:198,338,008...198,343,569
JBrowse link
G Hdac3 histone deacetylase 3 IEP RGD PMID:21763752 RGD:9590183 NCBI chr18:30,021,847...30,041,061
Ensembl chr18:30,021,941...30,041,025
JBrowse link
G Hgf hepatocyte growth factor ISO RGD PMID:15713721 RGD:1642702 NCBI chr 4:19,628,902...19,700,467
Ensembl chr 4:19,632,267...19,700,851
JBrowse link
G Hmga1 high mobility group AT-hook 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:23512162 NCBI chr20:5,612,902...5,620,596
Ensembl chr20:5,613,471...5,620,593
JBrowse link
G Hmgcr 3-hydroxy-3-methylglutaryl-CoA reductase ameliorates IMP
ISO
IEP
RGD PMID:19461650 PMID:31353547 PMID:27821167 RGD:5508692, RGD:401850595, RGD:401799622 NCBI chr 2:29,732,163...29,754,276
Ensembl chr 2:29,720,553...29,754,533
JBrowse link
G Hmox1 heme oxygenase 1 treatment IEP RGD PMID:22193921 RGD:10763276 NCBI chr19:13,452,365...13,479,823
Ensembl chr19:13,472,884...13,479,818
JBrowse link
G Hnf4a hepatocyte nuclear factor 4, alpha ISO RGD PMID:16804065 RGD:1601642 NCBI chr 3:172,606,220...172,667,758
Ensembl chr 3:172,606,220...172,667,758
JBrowse link
G Hp haptoglobin treatment ISO
IDA
protein:increased expression RGD PMID:17007284 PMID:20508159 RGD:1626341, RGD:11041859 NCBI chr19:54,449,151...54,453,701
Ensembl chr19:54,446,217...54,467,518
JBrowse link
G Hsd11b1 hydroxysteroid 11-beta dehydrogenase 1 disease_progression
susceptibility
IEP
ISO
mRNA:increased expression:ascending aorta,epicardial fat (human)
DNA:SNP: (rs12086634)T>G (human)
DNA:SNPs:5'utr,enhancer: (rs846910,rs12086634) (human)
DNA:SNP:: (rs846910) (human)
RGD PMID:14697232 PMID:23007990 PMID:23869418 PMID:21622477 PMID:28750217 RGD:1625074, RGD:329901930, RGD:329901929, RGD:329901919, RGD:329901909 NCBI chr13:107,277,526...107,327,462
Ensembl chr13:107,257,239...107,327,432
JBrowse link
G Htr2c 5-hydroxytryptamine receptor 2C ISO CTD Direct Evidence: marker/mechanism CTD PMID:17632216 PMID:18515891 PMID:19142101 NCBI chr  X:115,453,190...115,682,325
Ensembl chr  X:115,452,842...115,682,324
JBrowse link
G Icam1 intercellular adhesion molecule 1 ISO protein:increased expression:serum RGD PMID:19394054 RGD:2313467 NCBI chr 8:27,829,688...27,841,618
Ensembl chr 8:27,829,161...27,841,617
JBrowse link
G Idh2 isocitrate dehydrogenase (NADP(+)) 2 susceptibility ISO RGD PMID:31064654 RGD:14985252 NCBI chr 1:134,038,644...134,057,969
Ensembl chr 1:143,439,323...143,467,248
JBrowse link
G Igf2 insulin-like growth factor 2 IAGP DNA:insertion RGD PMID:18418699 RGD:2311520 NCBI chr 1:207,243,873...207,261,263
Ensembl chr 1:207,243,873...207,260,667
JBrowse link
G Igfbp2 insulin-like growth factor binding protein 2 ISO RGD PMID:16915540 RGD:1626481 NCBI chr 9:81,864,811...81,892,179
Ensembl chr 9:81,864,783...81,892,171
JBrowse link
G Il18 interleukin 18 treatment IEP
ISO
protein:increased expression:serum
CTD Direct Evidence: marker/mechanism
CTD
RGD
PMID:16644639 PMID:19717152 PMID:24456735 RGD:4889401, RGD:8655985 NCBI chr 8:59,802,072...59,829,275
Ensembl chr 8:59,809,592...59,831,286
JBrowse link
G Il6 interleukin 6 ISO CTD Direct Evidence: marker/mechanism CTD PMID:16644639 NCBI chr 4:5,889,999...5,894,575
Ensembl chr 4:5,889,999...5,894,610
JBrowse link
G Il6r interleukin 6 receptor susceptibility ISO DNA:polymorphism: :p.D358A RGD PMID:16817825 RGD:1625430 NCBI chr 2:177,582,020...177,646,705
Ensembl chr 2:177,582,164...177,645,221
JBrowse link
G Inppl1 inositol polyphosphate phosphatase-like 1 ISO DNA:SNPs: :rs2276047,snp8(human)
CTD Direct Evidence: marker/mechanism
CTD
RGD
PMID:15220217 PMID:15220217 RGD:1626127 NCBI chr 1:165,595,047...165,609,503
Ensembl chr 1:165,595,063...165,609,503
JBrowse link
G Ins2 insulin 2 ISO CTD Direct Evidence: marker/mechanism CTD PMID:11274935 PMID:16259526 NCBI chr 1:207,272,738...207,421,998
Ensembl chr 1:207,272,742...207,273,805
JBrowse link
G Insr insulin receptor ameliorates ISO RGD PMID:31353547 RGD:401850595 NCBI chr12:5,991,135...6,129,275
Ensembl chr12:5,981,835...6,128,803
JBrowse link
G Irs1 insulin receptor substrate 1 ameliorates IEP
ISO
protein:decreased expression:skeletal muscle RGD PMID:10842668 PMID:31353547 RGD:6482864, RGD:401850595 NCBI chr 9:91,001,137...91,053,959
Ensembl chr 9:90,993,519...91,054,538
JBrowse link
G Irs2 insulin receptor substrate 2 ameliorates ISO RGD PMID:31353547 RGD:401850595 NCBI chr16:85,190,310...85,214,543
Ensembl chr16:85,190,111...85,214,543
JBrowse link
G Itgav integrin subunit alpha V ISO RGD PMID:16784924 RGD:1627640 NCBI chr 3:89,245,382...89,333,512
Ensembl chr 3:89,245,095...89,333,511
JBrowse link
G Kl Klotho IEP
ISO
mRNA:decreased expression:kidney: RGD PMID:11027545 PMID:11027545 RGD:10403056, RGD:10403056 NCBI chr12:5,326,003...5,367,016
Ensembl chr12:5,325,959...5,367,015
JBrowse link
G Lbp lipopolysaccharide binding protein ISO CTD Direct Evidence: marker/mechanism CTD PMID:23349936 NCBI chr 3:167,373,786...167,400,941
Ensembl chr 3:167,373,924...167,401,518
JBrowse link
G Ldlr low density lipoprotein receptor ameliorates ISO RGD PMID:31353547 RGD:401850595 NCBI chr 8:28,546,191...28,569,075
Ensembl chr 8:28,546,146...28,570,675
JBrowse link
G Lep leptin ISO
IEP
CTD Direct Evidence: marker/mechanism
protein:increased expression:plasma (rat)
CTD
RGD
PMID:16793964 PMID:18515891 PMID:19462476 PMID:25380250 RGD:2311125, RGD:10053625 NCBI chr 4:58,626,529...58,640,663
Ensembl chr 4:58,626,523...58,640,661
JBrowse link
G Lepr leptin receptor IAGP DNA:mutations:cds: : (rat)
DNA:mutations::cds: : (rat)
RGD PMID:32710530 PMID:10901178 PMID:28746409 RGD:401960103, RGD:401965414, RGD:401965413 NCBI chr 5:121,409,735...121,593,201
Ensembl chr 5:121,474,099...121,591,215
JBrowse link
G Lipe lipase E, hormone sensitive type ISO mRNA:increased expression:liver (mouse) RGD PMID:29684438 RGD:329333017 NCBI chr 1:90,093,433...90,112,117
Ensembl chr 1:90,093,433...90,112,117
JBrowse link
G Lipg lipase G, endothelial type ISO RGD PMID:16354105 RGD:1580865 NCBI chr18:70,790,077...70,811,259
Ensembl chr18:70,790,077...70,812,260
JBrowse link
G Lmna lamin A/C ISO DNA:SNP: :c.138747C>T (human) RGD PMID:15205219 RGD:2306121 NCBI chr 2:176,237,564...176,265,301
Ensembl chr 2:176,237,564...176,288,072
JBrowse link
G Lrp6 LDL receptor related protein 6 ISO DNA:missense mutation:cds RGD PMID:17332414 RGD:2298725 NCBI chr 4:168,997,937...169,131,716
Ensembl chr 4:169,000,968...169,131,716
JBrowse link
G Lrpap1 LDL receptor related protein associated protein 1 susceptibility ISO associated with Coronary Disease;DNA:SNP:exon RGD PMID:14557872 RGD:1581921 NCBI chr14:75,651,371...75,663,380
Ensembl chr14:79,875,708...79,890,034
JBrowse link
G Map2k2 mitogen activated protein kinase kinase 2 ISO mRNA:decreased expression:blood, leukocyte (human) RGD PMID:26956845 RGD:155791561 NCBI chr 7:9,241,449...9,264,216
Ensembl chr 7:9,241,310...9,260,940
JBrowse link
G Mir122 microRNA 122 ISO miRNA:increased expression:serum RGD PMID:27899485 RGD:14401601 NCBI chr18:61,028,817...61,028,901 JBrowse link
G Mlxipl MLX interacting protein-like ameliorates IEP RGD PMID:27821167 RGD:401799622 NCBI chr12:27,178,158...27,213,675
Ensembl chr12:27,178,158...27,213,660
JBrowse link
G Mtmr9 myotubularin related protein 9 ISO DNA:SNP: :rs2293855 (human) RGD PMID:21796137 RGD:329853776 NCBI chr15:37,769,161...37,791,195
Ensembl chr15:41,945,105...41,967,136
JBrowse link
G Mttp microsomal triglyceride transfer protein ISO ClinVar Annotator: match by term: Metabolic syndrome X ClinVar PMID:8533758 PMID:9671739 PMID:16721486 PMID:25741868 PMID:28492532 NCBI chr 2:229,286,501...229,327,650
Ensembl chr 2:229,286,501...229,327,650
JBrowse link
G Nampt nicotinamide phosphoribosyltransferase ISO
IAGP
protein:increased expression:plasma
DNA:repeats:intron
RGD PMID:17556870 PMID:15922301 RGD:1642337, RGD:1642345 NCBI chr 6:55,152,756...55,189,547
Ensembl chr 6:55,151,926...55,189,544
JBrowse link
G Neil1 nei-like DNA glycosylase 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:16446448 PMID:17389588 NCBI chr 8:66,446,106...66,452,844
Ensembl chr 8:66,445,953...66,452,378
JBrowse link
G Ngf nerve growth factor ISO RGD PMID:11935372 RGD:1580935 NCBI chr 2:192,589,580...192,642,971
Ensembl chr 2:192,589,582...192,643,834
JBrowse link
G Nnmt nicotinamide N-methyltransferase IEP mRNA,protein:increased expression,increased activity:adipose tissue (rat) RGD PMID:25719492 RGD:401793724 NCBI chr 8:57,820,156...57,851,301
Ensembl chr 8:57,825,464...57,843,174
JBrowse link
G Nos3 nitric oxide synthase 3 treatment ISO
IDA
IMP
CTD Direct Evidence: marker/mechanism
ClinVar Annotator: match by term: Metabolic syndrome, susceptibility to
CTD
ClinVar
RGD
PMID:12947532 PMID:15269839 PMID:20876122 PMID:28361419 PMID:28967023 More... RGD:13461762, RGD:13450928 NCBI chr 4:11,686,088...11,706,604
Ensembl chr 4:11,686,268...11,706,664
JBrowse link
G Nox1 NADPH oxidase 1 ISO protein:increased expression, increased activity:peripheral blood mononuclear cell (human) RGD PMID:16380495 RGD:1580973 NCBI chr  X:101,572,338...101,625,571
Ensembl chr  X:101,572,340...101,595,520
JBrowse link
G Nr1h3 nuclear receptor subfamily 1, group H, member 3 ameliorates IEP RGD PMID:27821167 RGD:401799622 NCBI chr 3:97,614,616...97,632,053
Ensembl chr 3:97,614,616...97,624,532
JBrowse link
G Nr1i2 nuclear receptor subfamily 1, group I, member 2 ISO CTD Direct Evidence: marker/mechanism CTD PMID:20869355 NCBI chr11:75,965,717...76,006,733
Ensembl chr11:75,965,632...76,002,380
JBrowse link
G Nr1i3 nuclear receptor subfamily 1, group I, member 3 ISO CTD Direct Evidence: marker/mechanism CTD PMID:20869355 NCBI chr13:86,165,327...86,170,362
Ensembl chr13:86,165,349...86,170,370
JBrowse link
G Pck1 phosphoenolpyruvate carboxykinase 1 ameliorates IEP RGD PMID:27821167 RGD:401799622 NCBI chr 3:182,348,572...182,354,521
Ensembl chr 3:182,348,572...182,354,561
JBrowse link
G Pcsk9 proprotein convertase subtilisin/kexin type 9 ameliorates ISO RGD PMID:31353547 RGD:401850595 NCBI chr 5:126,440,102...126,462,507
Ensembl chr 5:126,440,102...126,462,507
JBrowse link
G Pde9a phosphodiesterase 9A treatment ISO RGD PMID:34618683 RGD:242170038 NCBI chr20:9,471,136...9,564,286
Ensembl chr20:9,471,167...9,564,286
JBrowse link
G Pla2g4a phospholipase A2 group 4A IEP mRNA:decreased expression:liver RGD PMID:21172452 RGD:6482748 NCBI chr13:64,427,921...64,572,352
Ensembl chr13:64,427,916...64,589,641
JBrowse link
G Pla2g6 phospholipase A2 group VI IEP mRNA:decreased expression:liver RGD PMID:21172452 RGD:6482748 NCBI chr 7:112,731,803...112,771,978
Ensembl chr 7:112,731,803...112,771,609
JBrowse link
G Pla2g7 phospholipase A2 group VII IEP mRNA:increased expression:liver RGD PMID:21172452 RGD:6482748 NCBI chr 9:17,362,214...17,404,476
Ensembl chr 9:24,859,502...24,901,747
JBrowse link
G Plat plasminogen activator, tissue type ISO protein:increased expression:serum RGD PMID:18249307 RGD:2311664 NCBI chr16:75,943,061...76,022,037
Ensembl chr16:75,943,064...75,967,696
JBrowse link
G Pon1 paraoxonase 1 ISO CTD Direct Evidence: marker/mechanism CTD
RGD
PMID:21573798 PMID:14602783 RGD:1642618 NCBI chr 4:34,261,312...34,292,327
Ensembl chr 4:34,261,289...34,287,924
JBrowse link
G Ppara peroxisome proliferator activated receptor alpha ameliorates IEP
ISO
mRNA:decreased expression:liver (rat) RGD PMID:11934685 PMID:31353547 RGD:628329, RGD:401850595 NCBI chr 7:118,712,261...118,780,723
Ensembl chr 7:118,712,412...118,780,714
JBrowse link
G Pparg peroxisome proliferator-activated receptor gamma no_association
ameliorates
ISO
IDA
DNA:SNP: :p.P12A (human) RGD PMID:18959602 PMID:31353547 PMID:16186413 PMID:16183630 RGD:2301843, RGD:401850595, RGD:1580686, RGD:1580683 NCBI chr 4:150,095,743...150,221,104
Ensembl chr 4:150,095,787...150,221,104
JBrowse link
G Ppargc1a PPARG coactivator 1 alpha IEP mRNA:decreased expression:gastrocnemius muscle (rat) RGD PMID:20383225 RGD:10059661 NCBI chr14:63,073,505...63,729,215
Ensembl chr14:63,273,189...63,729,213
JBrowse link
G Prkaa2 protein kinase AMP-activated catalytic subunit alpha 2 ameliorates ISO RGD PMID:31353547 RGD:401850595 NCBI chr 5:125,036,945...125,109,010
Ensembl chr 5:125,042,179...125,108,324
JBrowse link
G Prl prolactin ISO RGD PMID:16303834 RGD:1642558 NCBI chr17:38,287,355...38,298,234
Ensembl chr17:38,288,162...38,298,217
JBrowse link
G Ptgs2 prostaglandin-endoperoxide synthase 2 IEP protein:increased expression:liver RGD PMID:17883899 RGD:1642586 NCBI chr13:64,714,063...64,722,320
Ensembl chr13:64,713,619...64,722,320
JBrowse link
G Rbp4 retinol binding protein 4 disease_progression ISO protein:increased expression:blood serum (human)
associated with obstructive sleep apnea;protein:increased expression:blood plasma (human)
RGD PMID:19339013 PMID:19003725 RGD:329845591, RGD:329853307 NCBI chr 1:245,306,349...245,313,551
Ensembl chr 1:245,306,349...245,313,898
JBrowse link
G Reg1a regenerating family member 1 alpha treatment IDA RGD PMID:21685239 RGD:10044029 NCBI chr 4:112,450,466...112,453,130
Ensembl chr 4:112,450,468...112,453,585
JBrowse link
G Retn resistin ISO DNA:SNP:promoter:-420G>C (rs1862513) (human)
CTD Direct Evidence: marker/mechanism
CTD
RGD
PMID:18328350 PMID:17598818 RGD:7207155 NCBI chr12:6,508,653...6,511,115
Ensembl chr12:6,508,801...6,511,116
JBrowse link
G Scd stearoyl-CoA desaturase ameliorates IEP
ISO
RGD PMID:27821167 PMID:31353547 RGD:401799622, RGD:401850595 NCBI chr 1:253,218,968...253,232,101
Ensembl chr 1:253,218,970...253,231,785
JBrowse link
G Scg3 secretogranin III ISO DNA:SNP: :rs3764220 (human) RGD PMID:21796137 RGD:329853776 NCBI chr 8:76,399,777...76,442,015
Ensembl chr 8:85,280,253...85,361,874
JBrowse link
G Selp selectin P ISO RGD PMID:19061719 RGD:2312292 NCBI chr13:79,009,379...79,044,994
Ensembl chr13:79,009,475...79,044,987
JBrowse link
G Serpina12 serpin family A member 12 treatment ISO human protein in a mouse model RGD PMID:16030142 RGD:1547845 NCBI chr 6:122,952,552...122,967,271
Ensembl chr 6:128,717,334...128,732,049
JBrowse link
G Serpine1 serpin family E member 1 treatment IDA RGD PMID:26084260 RGD:11073736 NCBI chr12:25,237,977...25,248,356
Ensembl chr12:25,237,952...25,248,357
JBrowse link
G Shbg sex hormone binding globulin ISO protein:decreased expression:serum
CTD Direct Evidence: marker/mechanism
CTD
RGD
PMID:16968811 PMID:17992261 PMID:17884445 RGD:2313785 NCBI chr10:54,831,716...54,849,162
Ensembl chr10:54,831,718...54,838,760
JBrowse link
G Sim1 SIM bHLH transcription factor 1 ISO ClinVar Annotator: match by term: SIM1-associated metabolic syndrome ClinVar NCBI chr20:55,409,814...55,489,450
Ensembl chr20:55,410,577...55,489,449
JBrowse link
G Sirt1 sirtuin 1 treatment IDA
ISO
IEP
CTD Direct Evidence: marker/mechanism
protein:decreased expression:hippocampus (rat)
CTD
RGD
PMID:20068143 PMID:21514307 PMID:25356430 RGD:9585758, RGD:10053569 NCBI chr20:25,305,953...25,328,000
Ensembl chr20:25,305,476...25,328,000
JBrowse link
G Slc27a1 solute carrier family 27 member 1 susceptibility ISO RGD PMID:16611988 RGD:1642790 NCBI chr16:18,278,984...18,300,173
Ensembl chr16:18,313,015...18,330,045
JBrowse link
G Slc2a1 solute carrier family 2 member 1 ameliorates ISO RGD PMID:31353547 RGD:401850595 NCBI chr 5:138,002,522...138,030,742
Ensembl chr 5:138,002,522...138,030,742
JBrowse link
G Slc2a4 solute carrier family 2 member 4 ameliorates ISO RGD PMID:31353547 RGD:401850595 NCBI chr10:55,164,721...55,170,289
Ensembl chr10:55,164,721...55,170,270
JBrowse link
G Soat2 sterol O-acyltransferase 2 susceptibility ISO DNA:SNPs RGD PMID:14557872 RGD:1581921 NCBI chr 7:133,281,818...133,294,915
Ensembl chr 7:135,160,402...135,173,513
JBrowse link
G Sod2 superoxide dismutase 2 treatment ISO RGD PMID:28875871 RGD:26923956 NCBI chr 1:50,043,323...50,050,168
Ensembl chr 1:50,043,325...50,050,168
JBrowse link
G Srebf1 sterol regulatory element binding transcription factor 1 disease_progression
ameliorates
ISO
IEP
protein:increased expression:liver (mouse)
mRNA:increased expression:liver (rat)
RGD PMID:29173234 PMID:31353547 PMID:11934685 RGD:401827867, RGD:401850595, RGD:628329 NCBI chr10:45,507,152...45,529,164
Ensembl chr10:45,507,152...45,529,164
JBrowse link
G Tf transferrin susceptibility ISO protein:increased expression:serum RGD PMID:17416791 RGD:1601514 NCBI chr 8:112,668,667...112,695,376
Ensembl chr 8:112,647,642...112,695,400
JBrowse link
G Tgfb1 transforming growth factor, beta 1 IEP mRNA:increased expression:left heart ventricle RGD PMID:18692559 RGD:2306739 NCBI chr 1:90,324,312...90,340,627
Ensembl chr 1:90,324,046...90,340,899
JBrowse link
G Thbd thrombomodulin ISO associated with Diabetic Nephropathies;protein:increased expression:plasma RGD PMID:16567841 RGD:1601641 NCBI chr 3:156,316,526...156,320,178
Ensembl chr 3:156,306,632...156,320,582
JBrowse link
G Tlr2 toll-like receptor 2 ameliorates IEP RGD PMID:32151955 RGD:597538509 NCBI chr 2:171,499,189...171,504,831
Ensembl chr 2:171,497,060...171,520,194
JBrowse link
G Tnf tumor necrosis factor treatment IEP RGD PMID:24441717 RGD:10450604 NCBI chr20:3,626,685...3,629,303
Ensembl chr20:3,626,532...3,629,303
JBrowse link
G Tnfrsf1a TNF receptor superfamily member 1A ISO associated with obesity;protein:increased expression:plasma RGD PMID:17200772 RGD:1624178 NCBI chr 4:159,837,119...159,849,817
Ensembl chr 4:159,837,032...159,849,816
JBrowse link
G Trib3 tribbles pseudokinase 3 ISO CTD Direct Evidence: marker/mechanism CTD PMID:18497449 NCBI chr 3:161,269,939...161,275,533
Ensembl chr 3:161,269,955...161,274,802
JBrowse link
G Ucp2 uncoupling protein 2 IEP mRNA:decreased expression:liver (rat) RGD PMID:11934685 RGD:628329 NCBI chr 1:164,251,373...164,257,742
Ensembl chr 1:164,251,373...164,257,743
JBrowse link
G Ucp3 uncoupling protein 3 treatment IEP RGD PMID:11934685 RGD:628329 NCBI chr 1:164,227,910...164,240,893
Ensembl chr 1:164,227,882...164,241,210
JBrowse link
G Vcam1 vascular cell adhesion molecule 1 IEP RGD PMID:18718174 RGD:2313109 NCBI chr 2:206,723,050...206,742,783
Ensembl chr 2:206,723,044...206,742,801
JBrowse link
G Vegfa vascular endothelial growth factor A ISO protein:increased expression:plasma: RGD PMID:22206010 RGD:7483588 NCBI chr 9:22,452,854...22,468,194
Ensembl chr 9:22,439,392...22,468,194
JBrowse link
G Vwf von Willebrand factor ISO protein:increased expression:plasma RGD PMID:16764036 RGD:1625709 NCBI chr 4:160,042,900...160,177,757
Ensembl chr 4:160,047,982...160,177,757
JBrowse link
Neonatal Hypoglycemia, Simulating Foetopathia Diabetica term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abcc8 ATP binding cassette subfamily C member 8 ISO ClinVar Annotator: match by term: Neonatal hypoglycemia ClinVar PMID:10857971 PMID:16885549 PMID:17466004 PMID:21814221 PMID:25741868 More... NCBI chr 1:105,734,992...105,816,272
Ensembl chr 1:105,734,992...105,815,982
JBrowse link
G Kcnj11 potassium inwardly-rectifying channel, subfamily J, member 11 ISO ClinVar Annotator: match by term: Neonatal hypoglycemia ClinVar PMID:16609879 PMID:16885549 PMID:17446535 PMID:17466004 PMID:17635943 More... NCBI chr 1:105,727,473...105,731,167
Ensembl chr 1:105,727,570...105,731,169
JBrowse link
neurohypophyseal diabetes insipidus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Avp arginine vasopressin ISO
ISS
IEP
DNA:missense mutations: :multiple
ClinVar Annotator: match by term: AVP-related condition | ClinVar Annotator: match by term: Diabetes insipidus, neurohypophyseal, autosomal recessive | ClinVar Annotator: match by term: Neurohypophyseal diabetes insipidus
OMIM:125700
CTD Direct Evidence: marker/mechanism
ClinVar
MouseDO
CTD
OMIM
RGD
PMID:1740104 PMID:1840604 PMID:3390991 PMID:6132221 PMID:7057320 More... RGD:2301918, RGD:2301917 NCBI chr 3:138,246,544...138,248,522
Ensembl chr 3:138,246,554...138,248,522
JBrowse link
non-functioning pancreatic endocrine tumor term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arid1a AT-rich interaction domain 1A exacerbates ISO protein:decreased expression:endocrine pancreas (human) RGD PMID:32282764 RGD:126790640 NCBI chr 5:151,192,014...151,269,291
Ensembl chr 5:151,192,014...151,265,386
JBrowse link
G Cdk4 cyclin-dependent kinase 4 ISO associated with multiple endocrine neoplasia type 1;mRNA:increased expression:islet of Langerhans (human) RGD PMID:29149451 RGD:13781946 NCBI chr 7:64,771,453...64,774,891
Ensembl chr 7:64,771,147...64,775,163
JBrowse link
G Cdk6 cyclin-dependent kinase 6 ISO associated with multiple endocrine neoplasia type 1;mRNA:increased expression:islet of Langerhans (human) RGD PMID:29149451 RGD:13781946 NCBI chr 4:31,592,384...31,784,732
Ensembl chr 4:31,601,192...31,781,701
JBrowse link
opisthorchiasis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Actr3 actin related protein 3 ISO RGD PMID:25809205 RGD:11570559 NCBI chr13:39,353,413...39,396,509
Ensembl chr13:39,353,079...39,396,711
JBrowse link
G Mir192 microRNA 192 ISO RNA:increased expression:urine RGD PMID:26456596 RGD:41404678 NCBI chr 1:212,994,209...212,994,318
Ensembl chr 1:212,994,209...212,994,318
JBrowse link
pancreatic acinar cell adenocarcinoma term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Braf B-Raf proto-oncogene, serine/threonine kinase ISO DNA:missense mutation, gene fusions:multiple (human) RGD PMID:25266736 RGD:13462041 NCBI chr 4:69,329,772...69,476,931
Ensembl chr 4:69,342,813...69,476,931
JBrowse link
G Src SRC proto-oncogene, non-receptor tyrosine kinase disease_progression IEP RGD PMID:8569183 RGD:150523792 NCBI chr 3:166,511,616...166,559,463
Ensembl chr 3:166,511,985...166,559,462
JBrowse link
pancreatic adenocarcinoma term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adgrb1 adhesion G protein-coupled receptor B1 ISO mRNA:decreased expression:pancreas RGD PMID:11875720 RGD:13831350 NCBI chr 7:108,293,681...108,365,892
Ensembl chr 7:108,293,818...108,365,870
JBrowse link
G Akt3 AKT serine/threonine kinase 3 severity ISO mRNA:increased expression:pancreas (human) RGD PMID:27919956 RGD:13451128 NCBI chr13:91,475,839...91,758,060
Ensembl chr13:91,475,839...91,748,020
JBrowse link
G Birc2 baculoviral IAP repeat-containing 2 exacerbates ISO mRNA:increased expression:pancreas (human) RGD PMID:31964418 RGD:153344516 NCBI chr 8:13,253,697...13,273,672
Ensembl chr 8:13,253,706...13,271,911
JBrowse link
G Birc3 baculoviral IAP repeat-containing 3 disease_progression ISO mRNA:increased expression:pancreas (human) RGD PMID:31964418 RGD:153344516 NCBI chr 8:13,285,702...13,313,329
Ensembl chr 8:13,285,703...13,298,590
JBrowse link
G Birc5 baculoviral IAP repeat-containing 5 exacerbates ISO mRNA:increased expression:pancreas (human) RGD PMID:31964418 RGD:153344516 NCBI chr10:103,567,369...103,580,069
Ensembl chr10:103,572,080...103,582,155
JBrowse link
G Birc7 baculoviral IAP repeat-containing 7 exacerbates ISO mRNA:increased expression:pancreas (human) RGD PMID:31964418 RGD:153344516 NCBI chr 3:188,425,392...188,430,174
Ensembl chr 3:188,425,392...188,430,174
JBrowse link
G Cbr4 carbonyl reductase 4 ISO ClinVar Annotator: match by term: Pancreatic adenocarcinoma ClinVar PMID:9536098 PMID:17576681 PMID:25741868 PMID:28166811 PMID:28492532 NCBI chr16:33,625,734...33,695,067
Ensembl chr16:33,617,399...33,656,832
JBrowse link
G Ccnd1 cyclin D1 severity ISO protein:increased expression:pancreas (human) RGD PMID:25053516 RGD:13462053 NCBI chr 1:209,518,288...209,527,986
Ensembl chr 1:209,518,288...209,527,810
JBrowse link
G Cdk4 cyclin-dependent kinase 4 treatment ISO human cells in a mouse model RGD PMID:22509328 RGD:13792559 NCBI chr 7:64,771,453...64,774,891
Ensembl chr 7:64,771,147...64,775,163
JBrowse link
G Cdk6 cyclin-dependent kinase 6 treatment ISO human cells in a mouse model RGD PMID:25050737 RGD:13782144 NCBI chr 4:31,592,384...31,784,732
Ensembl chr 4:31,601,192...31,781,701
JBrowse link
G Cdkn2a cyclin-dependent kinase inhibitor 2A ISO DNA:missense mutations:cds:p.V126D, p.A148T (human) RGD PMID:16397522 RGD:8552283 NCBI chr 5:109,100,763...109,114,448
Ensembl chr 5:109,100,772...109,119,248
JBrowse link
G Cxcr4 C-X-C motif chemokine receptor 4 ISO RGD PMID:21448932 RGD:11352272 NCBI chr13:42,630,383...42,634,288
Ensembl chr13:42,630,104...42,634,459
JBrowse link
G E2f1 E2F transcription factor 1 treatment ISO Human cells in a mouse model RGD PMID:28797284 RGD:13838736 NCBI chr 3:163,524,739...163,535,563
Ensembl chr 3:163,524,739...163,535,563
JBrowse link
G Gstt1 glutathione S-transferase theta 1 ISO RGD PMID:11854392 RGD:14700985 NCBI chr20:12,856,068...12,873,020
Ensembl chr20:12,856,083...12,873,019
JBrowse link
G Hrg histidine-rich glycoprotein disease_progression ISO RGD PMID:21713765 RGD:11041886 NCBI chr11:91,559,087...91,573,982
Ensembl chr11:91,559,091...91,573,982
JBrowse link
G Jak1 Janus kinase 1 treatment ISO human cell line in a mouse model RGD PMID:29328487 RGD:13838743 NCBI chr 5:120,895,606...121,004,207
Ensembl chr 5:120,896,046...120,996,758
JBrowse link
G Map2k1 mitogen activated protein kinase kinase 1 treatment
severity
ISO human tissue in a mouse model
protein:increased expression:pancreas (human)
RGD PMID:28849200 PMID:19513748 RGD:13838804, RGD:13838840 NCBI chr 8:73,578,747...73,650,184
Ensembl chr 8:73,578,752...73,650,184
JBrowse link
G Mapk1 mitogen activated protein kinase 1 severity ISO mRNA:increased expression:pancreas (human) RGD PMID:27919956 RGD:13451128 NCBI chr11:97,462,025...97,529,193
Ensembl chr11:97,462,025...97,527,825
JBrowse link
G Mapk10 mitogen activated protein kinase 10 severity ISO DNA:SNP:intron: (rs2589506) (human) RGD PMID: RGD:13838853 NCBI chr14:6,802,247...7,094,103
Ensembl chr14:6,802,295...7,094,100
JBrowse link
G Mapk8 mitogen-activated protein kinase 8 exacerbates ISO protein:increased phosphorylation:pancreas (human) RGD PMID:24395444 RGD:150340683 NCBI chr16:8,645,171...8,728,225
Ensembl chr16:8,645,198...8,728,427
JBrowse link
G Mapk9 mitogen-activated protein kinase 9 ISO RGD PMID:22517435 RGD:14348976 NCBI chr10:34,670,750...34,711,972
Ensembl chr10:34,670,756...34,712,228
JBrowse link
G Nfkb1 nuclear factor kappa B subunit 1 severity ISO mRNA:increased expression:pancreas (human) RGD PMID:27919956 RGD:13451128 NCBI chr 2:226,689,745...226,805,897
Ensembl chr 2:226,689,745...226,783,088
JBrowse link
G Palld palladin, cytoskeletal associated protein ISO ClinVar Annotator: match by term: Pancreatic adenocarcinoma ClinVar PMID:9536098 PMID:10454945 PMID:11474289 PMID:17194196 PMID:17415588 More... NCBI chr16:33,238,943...33,632,236
Ensembl chr16:33,238,956...33,632,232
JBrowse link
G Plat plasminogen activator, tissue type ISO mRNA:increased expression:pancreas (human) RGD PMID:16733850 RGD:11541045 NCBI chr16:75,943,061...76,022,037
Ensembl chr16:75,943,064...75,967,696
JBrowse link
G Rac1 Rac family small GTPase 1 treatment ISO human cells in a mouse model RGD PMID:21037555 RGD:14392805 NCBI chr12:16,150,411...16,170,864
Ensembl chr12:16,128,649...16,172,109
JBrowse link
G Raf1 Raf-1 proto-oncogene, serine/threonine kinase treatment ISO human cells in a mouse model RGD PMID:15014358 RGD:14392893 NCBI chr 4:150,352,158...150,412,813
Ensembl chr 4:150,352,160...150,412,813
JBrowse link
G Ralb RAS like proto-oncogene B treatment ISO human cells in a mouse model RGD PMID:17174914 RGD:14394417 NCBI chr13:33,140,834...33,176,997
Ensembl chr13:33,140,835...33,176,998
JBrowse link
G Ralbp1 ralA binding protein 1 treatment ISO human cells in a mouse model RGD PMID:22509328 RGD:13792559 NCBI chr 9:112,903,289...112,940,093
Ensembl chr 9:112,903,302...112,939,659
JBrowse link
G Smad7 SMAD family member 7 severity ISO human cell and construct in a mouse model RGD PMID:10498890 RGD:14394510 NCBI chr18:71,263,508...71,291,849
Ensembl chr18:71,263,508...71,291,849
JBrowse link
G Stat1 signal transducer and activator of transcription 1 ameliorates ISO protein:increased expression:pancreas (human) RGD PMID:24658320 RGD:155630608 NCBI chr 9:56,911,522...56,951,926
Ensembl chr 9:56,911,523...57,077,346
JBrowse link
G Vegfc vascular endothelial growth factor C exacerbates ISO protein:increased expression:pancreas (human) RGD PMID:22082308 RGD:155630643 NCBI chr16:44,445,293...44,560,887
Ensembl chr16:44,445,293...44,560,887
JBrowse link
pancreatic adenosquamous carcinoma term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tgfb2 transforming growth factor, beta 2 ameliorates ISO human cells in a mouse model RGD PMID:21366804 RGD:155630611 NCBI chr13:100,691,540...100,793,227
Ensembl chr13:100,692,953...100,792,856
JBrowse link
pancreatic agenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gata6 GATA binding protein 6 ISO CTD Direct Evidence: marker/mechanism CTD PMID:22158542 NCBI chr18:2,460,909...2,492,322
Ensembl chr18:2,458,253...2,492,322
JBrowse link
G Pdx1 pancreatic and duodenal homeobox 1 ISO CTD Direct Evidence: marker/mechanism
ClinVar Annotator: match by term: Pancreatic hypoplasia
CTD
ClinVar
PMID:10720084 PMID:11270685 PMID:11772903 PMID:11978663 PMID:12099699 More... NCBI chr12:12,793,957...12,799,156
Ensembl chr12:12,793,957...12,799,156
JBrowse link
G Ptf1a pancreas associated transcription factor 1a ISO CTD Direct Evidence: marker/mechanism CTD PMID:15543146 PMID:22158542 PMID:24212882 NCBI chr17:82,051,281...82,053,135
Ensembl chr17:86,959,621...86,961,475
JBrowse link
pancreatic agenesis 1 term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pdx1 pancreatic and duodenal homeobox 1 susceptibility ISO ClinVar Annotator: match by term: Pancreatic agenesis 1 ClinVar
OMIM
PMID:8506821 PMID:8988180 PMID:9326926 PMID:9649577 PMID:12970316 More... NCBI chr12:12,793,957...12,799,156
Ensembl chr12:12,793,957...12,799,156
JBrowse link
pancreatic agenesis 2 term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G C17h10orf67 similar to human chromosome 10 open reading frame 67 ISO ClinVar Annotator: match by term: Pancreatic agenesis 2 ClinVar PMID:25741868 NCBI chr17:82,062,461...82,174,401
Ensembl chr17:86,980,186...87,082,700
JBrowse link
G Ptf1a pancreas associated transcription factor 1a ISO ClinVar Annotator: match by term: PANCREATIC HYPOPLASIA, CONGENITAL 2 | ClinVar Annotator: match by term: PTF1A-related condition OMIM
ClinVar
PMID:18591390 PMID:25741868 PMID:25775927 PMID:28492532 NCBI chr17:82,051,281...82,053,135
Ensembl chr17:86,959,621...86,961,475
JBrowse link
pancreatic cancer term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G A4gnt alpha-1,4-N-acetylglucosaminyltransferase ISO mRNA:increased expression:blood, mononuclear cell RGD PMID:16441422 RGD:2325199 NCBI chr 8:100,172,038...100,179,218
Ensembl chr 8:109,050,362...109,058,539
JBrowse link
G Abcc2 ATP binding cassette subfamily C member 2 ISO mRNA, protein:increased expression:pancreas RGD PMID:19020751 RGD:2317509 NCBI chr 1:252,613,875...252,672,459
Ensembl chr 1:252,614,017...252,673,471
JBrowse link
G Abcc3 ATP binding cassette subfamily C member 3 severity ISO mRNA:increased expression:pancreas RGD PMID:15688370 RGD:2325200 NCBI chr10:79,793,571...79,839,528
Ensembl chr10:79,793,583...79,839,494
JBrowse link
G Abcc5 ATP binding cassette subfamily C member 5 ISO mRNA:increased expression:pancreas RGD PMID:15688370 RGD:2325200 NCBI chr11:93,975,579...94,071,659
Ensembl chr11:93,978,274...94,071,655
JBrowse link
G Abo ABO, alpha 1-3-N-acetylgalactosaminyltransferase and alpha 1-3-galactosyltransferase ISO CTD Direct Evidence: marker/mechanism CTD
RGD
PMID:19648918 PMID:26098869 PMID:20103627 RGD:2317511 NCBI chr 3:30,560,172...30,604,758 JBrowse link
G Ace angiotensin I converting enzyme ISO RGD PMID:19880966 RGD:2325208 NCBI chr10:91,410,129...91,430,246
Ensembl chr10:91,409,819...91,430,942
JBrowse link
G Acvr1 activin A receptor type 1 ISO RGD PMID:9714055 RGD:2317217 NCBI chr 3:63,387,378...63,506,980
Ensembl chr 3:63,387,381...63,477,884
JBrowse link
G Acvr1b activin A receptor type 1B ISO mRNA:increased expression:pancreas
CTD Direct Evidence: marker/mechanism
CTD
OMIM
RGD
PMID:9714055 PMID:11248065 RGD:2317217, RGD:1598735 NCBI chr 7:134,164,987...134,208,389
Ensembl chr 7:134,164,991...134,208,388
JBrowse link
G Acvr2a activin A receptor type 2A ISO RGD PMID:9714055 RGD:2317217 NCBI chr 3:53,614,143...53,701,933
Ensembl chr 3:53,614,171...53,701,941
JBrowse link
G Adam15 ADAM metallopeptidase domain 15 ISO mRNA:increased expression:pancreas, epithelial cell RGD PMID:17465204 RGD:2325247 NCBI chr 2:177,052,363...177,062,879
Ensembl chr 2:177,052,363...177,062,849
JBrowse link
G Adam9 ADAM metallopeptidase domain 9 ISO mRNA:increased expression:pancreas, epithelial cell RGD PMID:17465204 RGD:2325247 NCBI chr16:73,725,186...73,804,284
Ensembl chr16:73,725,114...73,804,646
JBrowse link
G Adgre5 adhesion G protein-coupled receptor E5 ISO protein:increased expression:pancreas RGD PMID:12428789 RGD:2317573 NCBI chr19:24,397,972...24,418,648
Ensembl chr19:41,303,213...41,324,641
JBrowse link
G Adh1c alcohol dehydrogenase 1C (class I), gamma polypeptide ISO DNA:polymorphism: :p.R272Q (human) RGD PMID:19068087 RGD:2325313 NCBI chr 2:229,470,703...229,482,291
Ensembl chr 2:229,470,703...229,482,291
JBrowse link
G Adm adrenomedullin disease_progression ISO RGD PMID:17363587 PMID:16841081 RGD:2325317, RGD:2325318 NCBI chr 1:174,164,178...174,182,372
Ensembl chr 1:174,178,773...174,182,371
JBrowse link
G Ager advanced glycosylation end product-specific receptor ISO protein:decreased expression:serum RGD PMID:20398646 RGD:2325643 NCBI chr20:4,152,758...4,155,956
Ensembl chr20:4,151,965...4,155,685
JBrowse link
G Agtr2 angiotensin II receptor, type 2 ISO mRNA:increased expression:pancreas RGD PMID:11916627 RGD:2325641 NCBI chr  X:116,914,320...116,918,504
Ensembl chr  X:116,913,656...116,918,745
JBrowse link
G Ahr aryl hydrocarbon receptor ISO mRNA:increased expression:pancreas
CTD Direct Evidence: marker/mechanism|therapeutic
CTD
RGD
PMID:12203118 PMID:25826687 PMID:12203118 RGD:2325664 NCBI chr 6:57,961,423...57,998,901
Ensembl chr 6:57,961,423...57,998,901
JBrowse link
G Akt1 AKT serine/threonine kinase 1 severity
treatment
ISO protein:increased phosphorylation:pancreas (human)
human cells in a mouse model
RGD PMID:20697673 PMID:11595724 RGD:13450953, RGD:13452388 NCBI chr 6:137,534,810...137,555,131
Ensembl chr 6:137,535,390...137,552,610
JBrowse link
G Akt2 AKT serine/threonine kinase 2 ISO RGD PMID:16847462 PMID:19506583 RGD:2290476, RGD:5490965 NCBI chr 1:92,004,705...92,061,420
Ensembl chr 1:92,014,859...92,061,420
JBrowse link
G Alb albumin disease_progression ISO RGD PMID:18154768 PMID:20508721 RGD:2325678, RGD:2325675 NCBI chr14:17,891,564...17,907,043
Ensembl chr14:17,891,582...17,911,865
JBrowse link
G Aldh1a1 aldehyde dehydrogenase 1 family, member A1 ISO protein:decreased expression:pancreas RGD PMID:19216797 RGD:2325688 NCBI chr 1:227,426,939...227,579,497
Ensembl chr 1:227,427,070...227,579,500
JBrowse link
G Aldh2 aldehyde dehydrogenase 2 family member susceptibility ISO DNA:polymorphism: :p.E504K (human)
DNA:polymorphism (human)
RGD PMID:19068087 PMID:15714130 RGD:2325313, RGD:2325694 NCBI chr12:40,610,244...40,643,220
Ensembl chr12:40,610,224...40,643,219
JBrowse link
G Alox12b arachidonate 12-lipoxygenase, 12R type ISO CTD Direct Evidence: marker/mechanism CTD PMID:30258081 NCBI chr10:54,361,898...54,373,776
Ensembl chr10:54,361,898...54,373,776
JBrowse link
G Alox5 arachidonate 5-lipoxygenase ISO protein:increased expression:pancreas
CTD Direct Evidence: marker/mechanism
CTD
RGD
PMID:30258081 PMID:12163367 PMID:12481414 RGD:2317524, RGD:2317523 NCBI chr 4:151,203,948...151,251,126
Ensembl chr 4:151,203,949...151,251,126
JBrowse link
G Ang angiogenin disease_progression ISO mRNA, protein:increased expression:pancreas, serum RGD PMID:8665497 RGD:2325716 NCBI chr15:26,786,233...26,796,883
Ensembl chr15:26,786,065...26,801,106
JBrowse link
G Anxa1 annexin A1 ISO protein:increased expression:pancreas RGD PMID:19173988 PMID:17974280 RGD:2325722, RGD:2325723 NCBI chr 1:227,287,713...227,306,739
Ensembl chr 1:227,287,717...227,306,831
JBrowse link
G Anxa10 annexin A10 ISO CTD Direct Evidence: marker/mechanism CTD PMID:28369074 NCBI chr16:32,505,025...32,571,961
Ensembl chr16:32,467,126...32,571,961
JBrowse link
G Apaf1 apoptotic peptidase activating factor 1 ISO mRNA:increased expression:pancreas RGD PMID:17224646 RGD:2325739 NCBI chr 7:27,381,392...27,466,772
Ensembl chr 7:27,381,855...27,466,772
JBrowse link
G Apc APC regulator of WNT signaling pathway ISO DNA:deletions (human)
ClinVar Annotator: match by term: Cancer of the pancreas
DNA:mutation, loss of heterozygosity
ClinVar
RGD
PMID:1316610 PMID:8381579 PMID:9101302 PMID:9824584 PMID:11852337 More... RGD:2317208, RGD:2317207 NCBI chr18:26,138,382...26,196,021
Ensembl chr18:26,102,679...26,197,022
JBrowse link
G Apoa1 apolipoprotein A1 ISO protein:decreased expression:serum
protein:increased expression:pancreas
RGD PMID:17312459 PMID:17332923 RGD:2325758, RGD:2325757 NCBI chr 8:55,423,945...55,425,729
Ensembl chr 8:55,423,825...55,425,729
JBrowse link
G Apoe apolipoprotein E ISO protein:increased expression:pancreas (human) RGD PMID:16215274 RGD:2317552 NCBI chr 1:88,481,889...88,485,816
Ensembl chr 1:88,481,385...88,485,855
JBrowse link
G Arid1a AT-rich interaction domain 1A ISO RGD PMID:23355908 RGD:8694154 NCBI chr 5:151,192,014...151,269,291
Ensembl chr 5:151,192,014...151,265,386
JBrowse link
G Arid1b AT-rich interaction domain 1B ISO RGD PMID:23355908 RGD:8694154 NCBI chr 1:47,973,199...48,328,793
Ensembl chr 1:47,973,997...48,328,793
JBrowse link
G Arpc1a actin related protein 2/3 complex, subunit 1A ISO DNA:amplification (human) RGD PMID:19145645 RGD:2317557 NCBI chr12:9,502,496...9,525,304
Ensembl chr12:14,616,248...14,639,052
JBrowse link
G Artn artemin disease_progression ISO mRNA:increased expression:pancreas RGD PMID:20395845 PMID:19304517 RGD:2325815, RGD:2325817 NCBI chr 5:131,458,596...131,470,193
Ensembl chr 5:136,750,188...136,753,457
JBrowse link
G Atm ATM serine/threonine kinase susceptibility ISO DNA:SNP:intron:rs664677 (human)
ClinVar Annotator: match by term: Cancer of the pancreas
CTD Direct Evidence: marker/mechanism
DNA:SNP:exon:rs1801516(human)
DNA:SNP: :60G>A(human)
ClinVar
CTD
RGD
PMID:8698354 PMID:8845835 PMID:9497252 PMID:9536098 PMID:9792409 More... RGD:2317367, RGD:2317363, RGD:2317234 NCBI chr 8:62,724,939...62,829,040
Ensembl chr 8:62,727,291...62,828,629
JBrowse link
G Atr ATR serine/threonine kinase ISO DNA:SNP: :340C>T (human) RGD PMID:18381943 RGD:2317234 NCBI chr 8:105,306,299...105,403,742
Ensembl chr 8:105,306,305...105,403,718
JBrowse link
G Atrx ATRX, chromatin remodeler ISO CTD Direct Evidence: marker/mechanism CTD PMID:21252315 NCBI chr  X:74,916,548...75,062,880
Ensembl chr  X:74,916,548...75,062,880
JBrowse link
G Axl Axl receptor tyrosine kinase ISO CTD Direct Evidence: marker/mechanism CTD PMID:26206560 NCBI chr 1:90,392,864...90,424,123
Ensembl chr 1:90,392,864...90,424,009
JBrowse link
G B3galt5 Beta-1,3-galactosyltransferase 5 ISO mRNA:increased expression:pancreas RGD PMID:14555842 RGD:2317558 NCBI chr11:49,053,959...49,100,398
Ensembl chr11:49,006,560...49,101,283
JBrowse link
G Bad BCL2-associated agonist of cell death treatment ISO human cells in a mouse model RGD PMID:23523869 RGD:13451129 NCBI chr 1:213,562,719...213,572,034
Ensembl chr 1:213,562,187...213,572,034
JBrowse link
G Bag3 BAG cochaperone 3 ISO mRNA:increased expression:pancreas RGD PMID:11513873 RGD:2325843 NCBI chr 1:192,533,460...192,557,281
Ensembl chr 1:192,475,828...192,557,280
JBrowse link
G Bag4 BAG cochaperone 4 ISO mRNA:increased expression:pancreas RGD PMID:10799310 RGD:2325852 NCBI chr16:72,991,407...73,008,620
Ensembl chr16:72,991,362...73,013,273
JBrowse link
G Bap1 BRCA1 associated deubiquitinase 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:25231345 NCBI chr16:6,453,126...6,461,952
Ensembl chr16:6,452,974...6,461,952
JBrowse link
G Bcar1 BCAR1 scaffold protein, Cas family member ISO CTD Direct Evidence: marker/mechanism CTD PMID:26098869 NCBI chr19:56,588,500...56,623,190
Ensembl chr19:56,588,500...56,623,190
JBrowse link
G Bcl2l1 Bcl2-like 1 severity ISO human gene in a mouse model
CTD Direct Evidence: marker/mechanism
CTD
RGD
PMID:16904634 PMID:17941720 RGD:11353794 NCBI chr 3:161,713,777...161,764,844
Ensembl chr 3:161,745,540...161,764,907
Ensembl chr 1:161,745,540...161,764,907
JBrowse link
G Bid BH3 interacting domain death agonist ISO RGD PMID:15943879 RGD:2317560 NCBI chr 4:155,785,366...155,808,775
Ensembl chr 4:155,785,377...155,808,275
JBrowse link
G Boc BOC cell adhesion associated, oncogene regulated ISO RGD PMID:18772397 RGD:5490966 NCBI chr11:56,122,697...56,198,060
Ensembl chr11:69,628,660...69,704,004
JBrowse link
G Braf B-Raf proto-oncogene, serine/threonine kinase disease_progression ISO human gene in a mouse model RGD PMID:18490924 PMID:22628411 PMID:22871572 RGD:13451537, RGD:13462040, RGD:13461863 NCBI chr 4:69,329,772...69,476,931
Ensembl chr 4:69,342,813...69,476,931
JBrowse link
G Brca1 BRCA1, DNA repair associated ISO CTD Direct Evidence: marker/mechanism
ClinVar Annotator: match by term: Cancer of the pancreas | ClinVar Annotator: match by term: PANCREATIC CANCER, SUSCEPTIBILITY TO, 4 | ClinVar Annotator: match by term: Pancreatic cancer, susceptibility to, 4
ClinVar Annotator: match by term: PANCREATIC CANCER, SUSCEPTIBILITY TO, 4 | ClinVar Annotator: match by term: Pancreatic cancer | ClinVar Annotator: match by term: Pancreatic cancer, susceptibility to, 3 | ClinVar Annotator: match by term: Pancreatic cancer, susceptibility to, 4
ClinVar Annotator: match by term: PANCREATIC CANCER, SUSCEPTIBILITY TO, 4 | ClinVar Annotator: match by term: Pancreatic cancer | ClinVar Annotator: match by term: Pancreatic cancer, susceptibility to, 2 | ClinVar Annotator: match by term: Pancreatic cancer, susceptibility to, 4
ClinVar Annotator: match by term: Cancer of the pancreas | ClinVar Annotator: match by term: PANCREATIC CANCER, SUSCEPTIBILITY TO, 4 | ClinVar Annotator: match by term: Pancreatic cancer, susceptibility to, 2 | ClinVar Annotator: match by term: Pancreatic cancer, susceptibility to, 4
ClinVar Annotator: match by term: Cancer of the pancreas | ClinVar Annotator: match by term: PANCREATIC CANCER, SUSCEPTIBILITY TO, 4 | ClinVar Annotator: match by term: Pancreatic cancer 3 | ClinVar Annotator: match by term: Pancreatic cancer, susceptibility to, 4
ClinVar Annotator: match by term: Cancer of the pancreas | ClinVar Annotator: match by term: PANCREATIC CANCER, SUSCEPTIBILITY TO, 4 | ClinVar Annotator: match by term: Pancreatic cancer, susceptibility to, 1 | ClinVar Annotator: match by term: Pancreatic cancer, susceptibility to, 4
CTD
OMIM
ClinVar
PMID:1157798 PMID:2173504 PMID:2316185 PMID:2504116 PMID:2618727 More... NCBI chr10:86,917,693...86,978,012
Ensembl chr10:86,917,693...86,977,763
JBrowse link
G Brca2 BRCA2, DNA repair associated susceptibility ISO DNA:mutations: :
ClinVar Annotator: match by term: Cancer of the pancreas | ClinVar Annotator: match by term: PANCREATIC CANCER, SUSCEPTIBILITY TO, 2 | ClinVar Annotator: match by term: Pancreatic cancer, susceptibility to, 2
ClinVar Annotator: match by term: Cancer of the pancreas | ClinVar Annotator: match by term: PANCREATIC CANCER, SUSCEPTIBILITY TO, 2 | ClinVar Annotator: match by term: Pancreatic cancer, susceptibility to, 2 | ClinVar Annotator: match by term: Pancreatic cancer, susceptibility to, 3
ClinVar Annotator: match by term: PANCREATIC CANCER, SUSCEPTIBILITY TO, 2 | ClinVar Annotator: match by term: Pancreatic cancer | ClinVar Annotator: match by term: Pancreatic cancer, susceptibility to, 2 | ClinVar Annotator: match by term: Pancreatic cancer, susceptibility to, 4
ClinVar Annotator: match by term: PANCREATIC CANCER, SUSCEPTIBILITY TO, 2 | ClinVar Annotator: match by term: Pancreatic cancer | ClinVar Annotator: match by term: Pancreatic cancer, susceptibility to, 1 | ClinVar Annotator: match by term: Pancreatic cancer, susceptibility to, 2
ClinVar Annotator: match by term: PANCREATIC CANCER, SUSCEPTIBILITY TO, 2 | ClinVar Annotator: match by term: Pancreatic cancer | ClinVar Annotator: match by term: Pancreatic cancer 3 | ClinVar Annotator: match by term: Pancreatic cancer, susceptibility to, 2 | ClinVar Annotator: match by term: Pancreatic cancer, susceptibility to, 3 | ClinVar Annotator: match by term: Pancreatic cancer, susceptibility to, 4
ClinVar Annotator: match by term: Cancer of the pancreas | ClinVar Annotator: match by term: PANCREATIC CANCER, SUSCEPTIBILITY TO, 2 | ClinVar Annotator: match by term: Pancreatic cancer, susceptibility to, 2 | ClinVar Annotator: match by term: Pancreatic cancer, susceptibility to, 4
ClinVar Annotator: match by term: Cancer of the pancreas | ClinVar Annotator: match by term: PANCREATIC CANCER, SUSCEPTIBILITY TO, 2 | ClinVar Annotator: match by term: Pancreatic cancer 3 | ClinVar Annotator: match by term: Pancreatic cancer, susceptibility to, 2
CTD Direct Evidence: marker/mechanism
OMIM
ClinVar
CTD
RGD
PMID:186727 PMID:251866 PMID:278235 PMID:1772447 PMID:2200631 More... RGD:9068467 NCBI chr12:4,895,092...4,939,340
Ensembl chr12:4,895,447...4,936,194
JBrowse link
G Bsg basigin ISO CTD Direct Evidence: marker/mechanism CTD PMID:36574092 NCBI chr 7:10,643,788...10,651,005
Ensembl chr 7:10,643,789...10,651,005
JBrowse link
G Bub1b BUB1 mitotic checkpoint serine/threonine kinase B ISO protein:altered localization:pancreas RGD PMID:17242465 RGD:2326105 NCBI chr 3:126,017,019...126,069,470
Ensembl chr 3:126,017,045...126,069,796
JBrowse link
G Cab39 calcium binding protein 39 disease_progression ISO RGD PMID:28197410 RGD:14398834 NCBI chr 9:86,463,095...86,524,545
Ensembl chr 9:93,911,054...93,972,542
JBrowse link
G Cacybp calcyclin binding protein disease_progression ISO mRNA, protein:increased expression:pancreas RGD PMID:18765951 RGD:2326146 NCBI chr13:74,970,917...74,981,298
Ensembl chr13:74,970,923...74,981,505
JBrowse link
G Cap1 cyclase associated actin cytoskeleton regulatory protein 1 disease_progression ISO mRNA, protein:increased expression:pancreas RGD PMID:19188911 RGD:2326238 NCBI chr 5:140,427,265...140,507,678
Ensembl chr 5:140,427,269...140,453,470
JBrowse link
G Capn10 calpain 10 susceptibility ISO DNA:SNP:intron:rs3792267 (human) RGD PMID:20178008 RGD:4107073 NCBI chr 9:100,943,665...100,957,910
Ensembl chr 9:100,945,551...100,957,912
JBrowse link
G Casp8 caspase 8 susceptibility ISO DNA:SNP: :rs1045485 (human)
DNA:deletion, insertion:promoter (human)
RGD PMID:19843670 PMID:18483392 RGD:2317230, RGD:2315744 NCBI chr 9:67,747,109...67,806,699
Ensembl chr 9:67,758,033...67,806,699
JBrowse link
G Casp9 caspase 9 susceptibility
treatment
ISO DNA:snp:promoter:g.-1263A>G (human) RGD PMID:20357690 PMID:19209030 RGD:13451540, RGD:13462046 Ensembl chr 5:159,391,188...159,409,648 JBrowse link
G Cat catalase disease_progression ISO protein:decreased expression:pancreas RGD PMID:12499913 RGD:2317410 NCBI chr 3:110,297,340...110,329,526
Ensembl chr 3:110,297,342...110,329,526
JBrowse link
G Cbr4 carbonyl reductase 4 ISO ClinVar Annotator: match by term: PALLD-related condition | ClinVar Annotator: match by term: Pancreatic cancer, susceptibility to, 1 ClinVar PMID:25741868 PMID:28492532 NCBI chr16:33,625,734...33,695,067
Ensembl chr16:33,617,399...33,656,832
JBrowse link
G Cckar cholecystokinin A receptor IEP
ISO
mRNA:increased expression:pancreas RGD PMID:8222074 PMID:10457335 RGD:4110822, RGD:4110817 NCBI chr14:61,505,270...61,513,618
Ensembl chr14:61,505,270...61,513,618
JBrowse link
G Cckbr cholecystokinin B receptor disease_progression
susceptibility
IEP
IDA
ISO
mRNA:increased expression:pancreas RGD PMID:8302799 PMID:8222074 PMID:1458479 PMID:15688412 RGD:4110823, RGD:4110822, RGD:4110821, RGD:4110829 NCBI chr 1:159,771,733...159,781,738
Ensembl chr 1:169,183,194...169,193,745
JBrowse link
G Ccl20 C-C motif chemokine ligand 20 ISO CTD Direct Evidence: marker/mechanism CTD
RGD
PMID:30603057 PMID:10225458 RGD:7483623 NCBI chr 9:91,837,139...91,839,736
Ensembl chr 9:91,836,946...91,839,736
JBrowse link
G Ccl5 C-C motif chemokine ligand 5 ISO RGD PMID:19155524 RGD:2317567 NCBI chr10:68,820,330...68,824,906
Ensembl chr10:68,738,651...68,824,884
JBrowse link
G Ccnd1 cyclin D1 disease_progression
treatment
ISO human cells in a mouse model
mRNA, protein:increased expression:pancreas (mouse)
RGD PMID:22722256 PMID:11159909 PMID:17541034 RGD:13451541, RGD:13452385, RGD:13462059 NCBI chr 1:209,518,288...209,527,986
Ensembl chr 1:209,518,288...209,527,810
JBrowse link
G Ccng1 cyclin G1 treatment ISO human cells in mouse model RGD PMID:11177556 RGD:151361109 NCBI chr10:25,678,503...25,684,876
Ensembl chr10:25,677,885...25,683,766
JBrowse link
G Ccr4 C-C motif chemokine receptor 4 ISO protein:increased expression:pancreas RGD PMID:12761880 RGD:2317610 NCBI chr 8:123,054,505...123,060,244
Ensembl chr 8:123,054,324...123,077,642
JBrowse link
G Ccr5 C-C motif chemokine receptor 5 ISO RGD PMID:19155524 RGD:2317567 NCBI chr 8:132,629,097...132,660,980
Ensembl chr 8:132,629,683...132,637,594
JBrowse link
G Cd24 CD24 molecule ISO CTD Direct Evidence: marker/mechanism CTD PMID:28369074 NCBI chr20:48,655,549...48,661,786
Ensembl chr20:48,655,805...48,661,785
JBrowse link
G Cd44 CD44 molecule ISO CTD Direct Evidence: marker/mechanism CTD PMID:17446842 NCBI chr 3:109,610,824...109,699,776
Ensembl chr 3:109,612,054...109,699,424
JBrowse link
G Cdc42 cell division cycle 42 severity ISO mRNA, protein:increased expression:pancreas (human) RGD PMID:28181096 RGD:13452244 NCBI chr 5:154,838,478...154,876,629
Ensembl chr 5:154,839,631...154,876,627
JBrowse link
G Cdh1 cadherin 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:18223216 NCBI chr19:51,402,178...51,471,572
Ensembl chr19:51,402,034...51,471,565
JBrowse link
G Cdk4 cyclin-dependent kinase 4 susceptibility
disease_progression
ISO
IEP
protein:increased expression:islet of Langerhans (human)
protein:increased expression:islet of Langerhans, nucleus (rat)
protein:increased expression:pancreas (mouse)
RGD PMID:22761470 PMID:24531709 PMID:22477723 PMID:11159909 RGD:13452384, RGD:13452387, RGD:13452386, RGD:13452385 NCBI chr 7:64,771,453...64,774,891
Ensembl chr 7:64,771,147...64,775,163
JBrowse link
G Cdkn2a cyclin-dependent kinase inhibitor 2A ISO DNA:mutations:exon
CTD Direct Evidence: marker/mechanism
CTD
RGD
PMID:10627132 PMID:26098869 PMID:18772397 RGD:5490966 NCBI chr 5:109,100,763...109,114,448
Ensembl chr 5:109,100,772...109,119,248
JBrowse link
G Cflar CASP8 and FADD-like apoptosis regulator ISO CTD Direct Evidence: marker/mechanism CTD PMID:20876774 NCBI chr 9:67,679,502...67,747,226
Ensembl chr 9:67,679,559...67,726,434
JBrowse link
G Cftr CF transmembrane conductance regulator no_association
onset
ISO RGD PMID:17072959 PMID:16227367 RGD:2317157, RGD:2317156 NCBI chr 4:47,422,084...47,694,646
Ensembl chr 4:47,526,735...47,694,643
JBrowse link
G Chek1 checkpoint kinase 1 disease_progression ISO DNA:SNP: :35G>A (human) RGD PMID:18381943 RGD:2317234 NCBI chr 8:44,609,417...44,629,867
Ensembl chr 8:44,609,417...44,629,359
JBrowse link
G Cldn4 claudin 4 ISO RGD PMID:19555390 PMID:19793693 RGD:2317583, RGD:2317580 NCBI chr12:27,388,160...27,389,958
Ensembl chr12:27,387,981...27,389,958
JBrowse link
G Clptm1 CLPTM1 regulator of GABA type A receptor forward trafficking ISO CTD Direct Evidence: marker/mechanism CTD PMID:26098869 NCBI chr 1:88,417,447...88,449,047
Ensembl chr 1:88,417,447...88,449,446
JBrowse link
G Cnr1 cannabinoid receptor 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:16818650 NCBI chr 5:53,204,867...53,230,396
Ensembl chr 5:53,204,260...53,239,252
JBrowse link
G Cnr2 cannabinoid receptor 2 ISO CTD Direct Evidence: marker/mechanism CTD PMID:16818650 NCBI chr 5:153,408,968...153,435,092
Ensembl chr 5:153,409,147...153,435,961
JBrowse link
G Ctnnb1 catenin beta 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:18223216 NCBI chr 8:129,517,576...129,544,661
Ensembl chr 8:129,517,545...129,544,662
JBrowse link
G Cycs cytochrome c, somatic ISO RGD PMID:11920648 RGD:2317614 NCBI chr 4:80,982,667...80,984,767
Ensembl chr 4:80,982,668...80,984,816
Ensembl chr18:80,982,668...80,984,816
JBrowse link
G Cyp17a1 cytochrome P450, family 17, subfamily a, polypeptide 1 susceptibility ISO DNA:transition:5' utr:-34T>C rs743572 (human) RGD PMID:19642097 RGD:2317618 NCBI chr 1:255,476,861...255,484,547
Ensembl chr 1:255,476,861...255,482,974
JBrowse link
G Cyp2b1 cytochrome P450, family 2, subfamily b, polypeptide 1 EXP CTD Direct Evidence: therapeutic CTD PMID:10026857 PMID:10326030 PMID:10415878 PMID:11332152 PMID:11377651 More... NCBI chr 1:90,646,098...90,669,762 JBrowse link
G Daxx death-domain associated protein ISO CTD Direct Evidence: marker/mechanism CTD PMID:21252315 NCBI chr20:4,971,973...4,978,062
Ensembl chr20:4,971,941...4,977,720
JBrowse link
G Ddr1 discoidin domain receptor tyrosine kinase 1 treatment ISO RGD PMID:31310125 RGD:151347425 NCBI chr20:3,047,269...3,069,277
Ensembl chr20:3,050,375...3,069,276
JBrowse link
G Dpyd dihydropyrimidine dehydrogenase disease_progression ISO CTD Direct Evidence: marker/mechanism
protein:increased expression:pancreas
CTD
RGD
PMID:17443278 PMID:19020767 PMID:18309485 PMID:20072795 RGD:2317630, RGD:2317629 NCBI chr 2:209,293,902...210,159,777
Ensembl chr 2:209,293,929...210,159,778
JBrowse link
G Dyrk1a dual specificity tyrosine phosphorylation regulated kinase 1A ISO CTD Direct Evidence: marker/mechanism CTD PMID:31838052 NCBI chr11:47,360,824...47,479,033
Ensembl chr11:47,360,850...47,479,033
JBrowse link
G E2f1 E2F transcription factor 1 treatment IEP RGD PMID:28344092 RGD:13838737 NCBI chr 3:163,524,739...163,535,563
Ensembl chr 3:163,524,739...163,535,563
JBrowse link
G Efemp1 EGF containing fibulin extracellular matrix protein 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:19208748 NCBI chr14:106,811,769...106,890,961
Ensembl chr14:106,802,304...106,892,808
JBrowse link
G Egf epidermal growth factor disease_progression ISO protein:increased expression:pancreas RGD PMID:1347773 PMID:19506583 RGD:2317650, RGD:5490965 NCBI chr 2:220,893,660...220,976,331
Ensembl chr 2:220,893,660...220,976,297
JBrowse link
G Egfr epidermal growth factor receptor ISO CTD Direct Evidence: marker/mechanism CTD
RGD
PMID:27720938 PMID:17452677 PMID:19506583 RGD:5131631, RGD:5490965 NCBI chr14:95,378,626...95,551,358
Ensembl chr14:95,378,626...95,551,358
JBrowse link
G Eif4a3 eukaryotic translation initiation factor 4A3 ISO protein:increased expression:serum (human) RGD PMID:15796914 RGD:10045549 NCBI chr10:105,047,567...105,057,561
Ensembl chr10:105,047,568...105,058,207
JBrowse link
G Epcam epithelial cell adhesion molecule ISO CTD Direct Evidence: marker/mechanism CTD PMID:17446842 NCBI chr 6:12,633,715...12,649,678
Ensembl chr 6:12,631,611...12,649,702
JBrowse link
G Epha3 Eph receptor A3 ISO RGD PMID:14670182 RGD:2317720 NCBI chr11:14,585,041...14,920,721
Ensembl chr11:14,586,727...14,920,425
JBrowse link
G Ercc1 ERCC excision repair 1, endonuclease non-catalytic subunit susceptibility ISO DNA:snp:3' utr:c.*197G>T (rs3212986) (human) RGD PMID:27050953 RGD:13207426 NCBI chr 1:88,099,308...88,135,966
Ensembl chr 1:88,118,891...88,139,120
JBrowse link
G Ercc2 ERCC excision repair 2, TFIIH core complex helicase subunit treatment ISO pancreatic adenocarcinoma;DNA:SNPs: :rs1799793,rs1052555(human)
DNA,protein:SNPs:exons:rs1799793,rs1052559(human)
RGD PMID:18544627 PMID:21404106 PMID:16458430 RGD:2317223, RGD:11252206, RGD:2317228 NCBI chr 1:88,161,342...88,175,102
Ensembl chr 1:88,160,988...88,175,102
JBrowse link
G Ercc4 ERCC excision repair 4, endonuclease catalytic subunit ISO pancreatic adenocarcinoma;DNA:SNP: :rs1800067(human) RGD PMID:18544627 RGD:2317223 NCBI chr10:2,926,085...2,958,176
Ensembl chr10:2,920,455...2,955,539
JBrowse link
G Etaa1 ETAA1 activator of ATR kinase ISO CTD Direct Evidence: marker/mechanism CTD PMID:26098869 NCBI chr14:96,500,899...96,515,617
Ensembl chr14:96,500,899...96,517,796
JBrowse link
G Ezh2 enhancer of zeste 2 polycomb repressive complex 2 subunit IEP protein:increased expression:pancreas RGD PMID:22222375 RGD:9588324 NCBI chr 4:77,624,223...77,698,598
Ensembl chr 4:77,624,223...77,687,183
JBrowse link
G Fanca FA complementation group A ISO DNA,Protein:polymorphisms:exons:c.377C>G, c.661A>G (human) RGD PMID:15591268 RGD:2317735 NCBI chr19:68,210,562...68,271,080
Ensembl chr19:68,212,643...68,271,019
JBrowse link
G Fancc FA complementation group C ISO DNA:nonsense mutation (human) RGD PMID:16243825 PMID:15695377 RGD:2317238, RGD:2317239 NCBI chr17:1,686,374...1,818,672
Ensembl chr17:1,687,017...1,835,096
JBrowse link
G Fancg FA complementation group G ISO RGD PMID:16243825 RGD:2317238 NCBI chr 5:62,027,494...62,037,202
Ensembl chr 5:62,027,500...62,035,787
JBrowse link
G Faslg Fas ligand severity
resistance
ISO DNA:polymorphism:promoter:-844>>T (human) RGD PMID:11115536 PMID:12370548 PMID:18483392 RGD:2317745, RGD:2317744, RGD:2315744 NCBI chr13:76,680,885...76,706,042
Ensembl chr13:76,688,243...76,695,503
JBrowse link
G Fgf13 fibroblast growth factor 13 ISO CTD Direct Evidence: marker/mechanism CTD PMID:19917848 NCBI chr  X:142,312,381...142,838,581
Ensembl chr  X:142,312,391...142,423,536
JBrowse link
G Fgf2 fibroblast growth factor 2 severity ISO mRNA:increased expression:pancreas
protein:increased expression:bile
RGD PMID:9293890 PMID:11562741 PMID:11478488 PMID:12670449 RGD:2317762, RGD:2317760, RGD:2317765, RGD:2317759 NCBI chr 2:122,164,454...122,218,796
Ensembl chr 2:122,164,454...122,224,493
JBrowse link
G Flt3lg Fms related receptor tyrosine kinase 3 ligand IMP RGD PMID:16528542 RGD:11049499 NCBI chr 1:104,751,518...104,756,925
Ensembl chr 1:104,749,983...104,757,038
JBrowse link
G Foxp1 forkhead box P1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:25485836 NCBI chr 4:133,117,346...133,808,647
Ensembl chr 4:133,122,055...133,500,272
JBrowse link
G Fscn1 fascin actin-bundling protein 1 severity ISO protein:increased expression:pancreas RGD PMID:17696949 RGD:2317785 NCBI chr12:16,710,601...16,723,734
Ensembl chr12:16,710,601...16,723,734
JBrowse link
G Fxyd3 FXYD domain-containing ion transport regulator 3 ISO CTD Direct Evidence: marker/mechanism CTD PMID:16003754 NCBI chr 1:95,432,918...95,440,129
Ensembl chr 1:95,432,919...95,439,702
JBrowse link
G Gadd45a growth arrest and DNA-damage-inducible, alpha ISO CTD Direct Evidence: therapeutic CTD PMID:19003803 NCBI chr 4:97,484,497...97,486,799
Ensembl chr 4:97,484,502...97,486,807
JBrowse link
G Gdnf glial cell derived neurotrophic factor severity ISO RGD PMID:18652760 RGD:2324925 NCBI chr 2:58,621,327...58,647,242
Ensembl chr 2:58,621,327...58,647,240
JBrowse link
G Gli1 GLI family zinc finger 1 ISO RGD PMID:21186299 PMID:18772397 RGD:5491005, RGD:5490966 NCBI chr 7:65,042,237...65,054,888
Ensembl chr 7:65,042,237...65,054,540
JBrowse link
G Gli3 GLI family zinc finger 3 ISO RGD PMID:18772397 RGD:5490966 NCBI chr17:54,134,064...54,405,198
Ensembl chr17:54,134,064...54,405,198
JBrowse link
G Gnas GNAS complex locus ISO RGD PMID:12771991 RGD:2317256 NCBI chr 3:183,489,648...183,554,570
Ensembl chr 3:183,503,243...183,554,536
JBrowse link
G Golm1 golgi membrane protein 1 ISO RGD PMID:37338014 RGD:401827117 NCBI chr17:4,995,925...5,044,329
Ensembl chr17:4,996,223...5,047,414
JBrowse link
G Gstp1 glutathione S-transferase pi 1 susceptibility ISO DNA:SNP:cds:p.I105V (rs1695) (human) RGD PMID:19536452 PMID:19786118 RGD:2317805, RGD:2317804 NCBI chr 1:210,767,237...210,770,242
Ensembl chr 1:210,767,237...210,769,705
JBrowse link
G Hgf hepatocyte growth factor ISO protein:increased expression:serum RGD PMID:20017454 RGD:2317895 NCBI chr 4:19,628,902...19,700,467
Ensembl chr 4:19,632,267...19,700,851
JBrowse link
G Hif1a hypoxia inducible factor 1 subunit alpha ISO CTD Direct Evidence: marker/mechanism CTD PMID:16628086 NCBI chr 6:98,357,788...98,405,068
Ensembl chr 6:98,359,910...98,405,323
JBrowse link
G Hnf1b HNF1 homeobox B ISO CTD Direct Evidence: marker/mechanism CTD PMID:39887605 NCBI chr10:69,233,377...69,287,360
Ensembl chr10:69,233,131...69,287,361
JBrowse link
G Hs3st2 heparan sulfate-glucosamine 3-sulfotransferase 2 ISO DNA:hypermethylation:promoter (human) RGD PMID:12527896 RGD:2317633 NCBI chr 1:175,956,161...176,077,400
Ensembl chr 1:185,386,761...185,508,700
JBrowse link
G Hspb1 heat shock protein family B (small) member 1 disease_progression ISO RGD PMID:21833720 RGD:10402768 NCBI chr12:26,430,640...26,432,301
Ensembl chr12:26,430,640...26,432,301
JBrowse link
G Icam1 intercellular adhesion molecule 1 ISO mRNA, protein:increased expression:pancreas RGD PMID:11815996 RGD:2325165 NCBI chr 8:27,829,688...27,841,618
Ensembl chr 8:27,829,161...27,841,617
JBrowse link
G Ifna1 interferon, alpha 1 ISO CTD Direct Evidence: therapeutic CTD PMID:17198089 PMID:17961653 NCBI chr 5:108,143,240...108,143,809
Ensembl chr 5:108,143,240...108,143,809
JBrowse link
G Ifng interferon gamma ISO protein:increased expression:plasma RGD PMID:19152246 RGD:2317258 NCBI chr 7:55,789,180...55,793,216
Ensembl chr 7:55,761,736...55,793,216
JBrowse link
G Igf1 insulin-like growth factor 1 susceptibility ISO DNA:polymorphism (human) RGD PMID:19064563 RGD:2306689 NCBI chr 7:24,169,608...24,249,446
Ensembl chr 7:24,130,137...24,246,764
JBrowse link
G Igf1r insulin-like growth factor 1 receptor ISO RGD PMID:14559833 PMID:19732452 PMID:19885860 RGD:2317651, RGD:2317642, RGD:2317640 NCBI chr 1:130,959,787...131,248,664
Ensembl chr 1:130,959,997...131,248,664
JBrowse link
G Il10 interleukin 10 disease_progression
susceptibility
ISO protein:increased expression:serum
DNA:polymorphism: :-1082G>A (human)
RGD PMID:17235586 PMID:30304975 PMID:30610790 PMID:19250218 RGD:2317655, RGD:14975257, RGD:14975253, RGD:2317653 NCBI chr13:45,024,921...45,029,586
Ensembl chr13:45,025,087...45,029,580
JBrowse link
G Il13 interleukin 13 disease_progression ISO protein:increased expression:pancreas RGD PMID:18758789 PMID:12808442 RGD:2317669, RGD:2317670 NCBI chr10:38,290,926...38,293,483
Ensembl chr10:38,290,926...38,293,483
JBrowse link
G Il13ra2 interleukin 13 receptor subunit alpha 2 treatment ISO RGD PMID:11748276 RGD:8549514 NCBI chr  X:115,814,620...115,886,080
Ensembl chr  X:115,814,622...115,841,455
JBrowse link
G Il1a interleukin 1 alpha ISO RGD PMID:7787209 RGD:2311069 NCBI chr 3:136,979,804...136,990,236
Ensembl chr 3:136,979,805...136,998,013
JBrowse link
G Il1b interleukin 1 beta susceptibility ISO DNA:polymorphisms:promoter:-511C>T, -31T>C (human)
protein:increased expression:serum (human)
RGD PMID:19251436 PMID:7787209 RGD:2317215, RGD:2311069 NCBI chr 3:137,030,200...137,036,581
Ensembl chr 3:137,030,205...137,036,601
JBrowse link
G Il2 interleukin 2 treatment ISO RGD PMID:9080118 RGD:8663440 NCBI chr 2:121,932,968...121,937,672
Ensembl chr 2:121,932,968...121,937,672
JBrowse link
G Il24 interleukin 24 ISO CTD Direct Evidence: therapeutic CTD PMID:15580305 NCBI chr13:44,905,362...44,910,760
Ensembl chr13:44,905,363...44,910,760
JBrowse link
G Il3 interleukin 3 ISO protein:increased expression:serum RGD PMID:15843207 RGD:2317663 NCBI chr10:38,405,716...38,408,066
Ensembl chr10:38,906,460...38,908,810
JBrowse link
G Il4 interleukin 4 disease_progression ISO protein:increased expression:blood RGD PMID:19957810 PMID:12097255 PMID:10404069 RGD:2317261, RGD:2317265, RGD:2317267 NCBI chr10:38,272,003...38,277,549
Ensembl chr10:38,272,003...38,277,549
JBrowse link
G Il4r interleukin 4 receptor disease_progression ISO protein:increased expression:pancreas RGD PMID:18758789 RGD:2317669 NCBI chr 1:189,545,739...189,570,639
Ensembl chr 1:189,544,988...189,570,636
JBrowse link
G Il6 interleukin 6 disease_progression ISO RGD PMID:30610790 PMID:30304975 RGD:14975253, RGD:14975257 NCBI chr 4:5,889,999...5,894,575
Ensembl chr 4:5,889,999...5,894,610
JBrowse link
G Ilk integrin-linked kinase ISO DNA:mutations:exon RGD PMID:18772397 RGD:5490966 NCBI chr 1:169,500,716...169,506,972
Ensembl chr 1:169,498,681...169,506,964
JBrowse link
G Inpp4b inositol polyphosphate-4-phosphatase type II B ISO CTD Direct Evidence: marker/mechanism CTD PMID:29415082 NCBI chr19:42,824,710...43,575,039
Ensembl chr19:42,829,871...43,185,091
JBrowse link
G Ins2 insulin 2 susceptibility
disease_progression
ISO associated with Diabetes Mellitus
DNA:Polymorphism:promoter:-23 HphI (human)
associated with Diabetes Mellitus, Non-Insulin-Depend
RGD PMID:19375425 PMID:19152242 PMID:19628082 PMID:19572116 RGD:2317250, RGD:2317253, RGD:2317245, RGD:2317247 NCBI chr 1:207,272,738...207,421,998
Ensembl chr 1:207,272,742...207,273,805
JBrowse link
G Itga11 integrin subunit alpha 11 ISO DNA:mutations:exon RGD PMID:18772397 RGD:5490966 NCBI chr 8:72,041,432...72,150,137
Ensembl chr 8:72,016,652...72,150,137
JBrowse link
G Itga4 integrin subunit alpha 4 ISO DNA:mutations:exon RGD PMID:18772397 RGD:5490966 NCBI chr 3:84,569,487...84,646,276
Ensembl chr 3:84,560,369...84,641,039
JBrowse link
G Itga9 integrin subunit alpha 9 ISO DNA:mutations:exon RGD PMID:18772397 RGD:5490966 NCBI chr 8:127,185,244...127,493,296
Ensembl chr 8:127,169,226...127,493,296
JBrowse link
G Kdr kinase insert domain receptor ISO CTD Direct Evidence: therapeutic CTD
RGD
PMID:12385004 PMID:19930156 RGD:5684397 NCBI chr14:32,572,031...32,615,204
Ensembl chr14:32,572,049...32,615,192
JBrowse link
G Klf5 KLF transcription factor 5 ISO CTD Direct Evidence: marker/mechanism CTD PMID:26098869 NCBI chr15:82,472,081...82,487,267
Ensembl chr15:82,472,065...82,487,262
JBrowse link
G Kras KRAS proto-oncogene, GTPase disease_progression ISO CTD Direct Evidence: marker/mechanism CTD
OMIM
RGD
PMID:14520703 PMID:19424582 PMID:21699781 PMID:24694877 PMID:25961927 More... RGD:1581761, RGD:5490966, RGD:5490965 NCBI chr 4:179,916,255...179,949,613
Ensembl chr 4:179,919,802...179,949,320
JBrowse link
G L1cam L1 cell adhesion molecule treatment ISO RGD PMID:22095073 RGD:11570404 NCBI chr  X:156,748,597...156,775,116
Ensembl chr  X:156,748,597...156,775,077
JBrowse link
G Ldha lactate dehydrogenase A ISO CTD Direct Evidence: marker/mechanism CTD PMID:29384525 NCBI chr 1:106,508,092...106,517,512
Ensembl chr 1:106,502,182...106,517,521
JBrowse link
G Lig3 DNA ligase 3 resistance ISO DNA:SNP:intron:rs 2074522 (human) RGD PMID:19147782 RGD:2317363 NCBI chr10:68,215,371...68,238,705
Ensembl chr10:68,215,407...68,238,704
JBrowse link
G Lig4 DNA ligase 4 susceptibility ISO associated with Diabetes Mellitus;DNA:polymorphism: :54C>T (human) RGD PMID:19147782 RGD:2317363 NCBI chr16:86,220,345...86,228,930
Ensembl chr16:86,220,279...86,229,926
JBrowse link
G LOC100912356 interferon alpha-1-like ISO CTD Direct Evidence: therapeutic CTD PMID:15320962 NCBI chr 5:103,227,820...103,230,500 JBrowse link
G Lrp2 LDL receptor related protein 2 ISO RGD PMID:18772397 RGD:5490966 NCBI chr 3:74,597,148...74,754,535
Ensembl chr 3:74,597,148...74,754,535
JBrowse link
G Lum lumican disease_progression ISO DNA:SNP: :rs2268578 (human) RGD PMID:19843670 PMID:17671699 RGD:2317230, RGD:2317682 NCBI chr 7:34,245,323...34,252,510
Ensembl chr 7:34,245,360...34,252,508
JBrowse link
G Ly6e lymphocyte antigen 6 family member E ISO CTD Direct Evidence: marker/mechanism CTD PMID:17446842 NCBI chr 7:108,815,970...108,820,444
Ensembl chr 7:108,816,887...108,820,443
JBrowse link
G Manf mesencephalic astrocyte-derived neurotrophic factor no_association ISO DNA:point mutations, deletions:cds:multiple (human)
DNA:polymorphisms: :multiple (human)
RGD PMID:9174057 PMID:17072959 RGD:2325804, RGD:2317157 NCBI chr 8:107,500,856...107,551,595
Ensembl chr 8:116,427,048...116,429,910
JBrowse link
G Map2k4 mitogen activated protein kinase kinase 4 ISO RGD PMID:18772397 RGD:5490966 NCBI chr10:50,842,348...50,947,063
Ensembl chr10:50,844,034...50,947,185
JBrowse link
G Men1 menin 1 ISO associated with Neuroendocrine Tumors; protein:increased expression:multiple organs
CTD Direct Evidence: marker/mechanism
CTD
RGD
PMID:17961653 PMID:21252315 PMID:17278096 RGD:2317340 NCBI chr 1:213,068,166...213,074,132
Ensembl chr 1:213,068,166...213,074,120
JBrowse link
G Met MET proto-oncogene, receptor tyrosine kinase severity IEP
ISO
protein:increased expression:pancreas (rat)
mRNA:increased expression:pancreas (human)
RGD PMID:9211490 PMID:19506583 PMID:15448002 RGD:2317613, RGD:5490965, RGD:2317235 NCBI chr 4:46,756,823...46,864,041
Ensembl chr 4:46,756,506...46,870,821
JBrowse link
G Mgat4a alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase A ISO RGD PMID:16434023 RGD:2317701 NCBI chr 9:47,169,229...47,282,577
Ensembl chr 9:47,169,232...47,282,574
JBrowse link
G Mgmt O-6-methylguanine-DNA methyltransferase ISO protein:decreased expression:neuroendocrine tumor (human) RGD PMID:19118063 RGD:2317628 NCBI chr 1:201,140,832...201,367,481
Ensembl chr 1:201,140,661...201,367,482
JBrowse link
G Mir107 microRNA 107 severity ISO RGD PMID:28720759 RGD:14975279 NCBI chr 1:241,750,418...241,750,504 JBrowse link
G Mki67 marker of proliferation Ki-67 disease_progression ISO protein:increased expression:pancreas RGD PMID:20137856 PMID:20350215 RGD:2317704, RGD:2317703 NCBI chr 1:199,926,150...199,952,847
Ensembl chr 1:199,926,150...199,952,593
JBrowse link
G Mmp2 matrix metallopeptidase 2 ISO mRNA:increased expression:pancreas
CTD Direct Evidence: marker/mechanism
protein:increased activity:pancreatic juice
CTD
RGD
PMID:30603057 PMID:7635566 PMID:11961486 RGD:2325766, RGD:2325752 NCBI chr19:30,327,643...30,355,856
Ensembl chr19:30,327,643...30,355,856
JBrowse link
G Mmp9 matrix metallopeptidase 9 disease_progression ISO CTD Direct Evidence: marker/mechanism
mRNA:increased expression:pancreas
protein:increased expression:serum
CTD
RGD
PMID:22952646 PMID:18445772 PMID:7635566 PMID:19629003 PMID:18030366 RGD:2325849, RGD:2325766, RGD:2325831, RGD:2325854 NCBI chr 3:174,103,474...174,111,434
Ensembl chr 3:174,084,123...174,111,442
JBrowse link
G Mpo myeloperoxidase resistance ISO DNA:polymorphism:promoter:-463G>A (human) RGD PMID:18205184 RGD:2317406 NCBI chr10:73,092,124...73,102,057
Ensembl chr10:73,092,400...73,102,056
JBrowse link
G Msln mesothelin ISO CTD Direct Evidence: marker/mechanism
associated with Pancreatic Disease; protein:increased expression:pancreas
CTD
RGD
PMID:11751476 PMID:19843662 PMID:18281514 PMID:17785569 PMID:17019794 RGD:2326052, RGD:2326056, RGD:2326062, RGD:2326060 NCBI chr10:15,276,489...15,285,921
Ensembl chr10:15,275,659...15,282,153
JBrowse link
G Mtap methylthioadenosine phosphorylase ISO DNA, protein:deletion, decreased activity:pancreas: RGD PMID:15534104 RGD:2317952 NCBI chr 5:108,990,270...109,036,494
Ensembl chr 5:108,988,830...109,055,214
JBrowse link
G Mthfr methylenetetrahydrofolate reductase susceptibility ISO DNA:polymorphism: :677C>T (human) RGD PMID:16737574 RGD:2317120 NCBI chr 5:163,748,346...163,768,141
Ensembl chr 5:163,748,321...163,768,105
JBrowse link
G Mtor mechanistic target of rapamycin kinase IMP RGD PMID:23149918 RGD:10040959 NCBI chr 5:164,167,985...164,277,438
Ensembl chr 5:164,167,928...164,277,435
JBrowse link
G Mtr 5-methyltetrahydrofolate-homocysteine methyltransferase susceptibility
no_association
ISO DNA:Polymorphism: :rs1805087 (human) RGD PMID:18843018 PMID:16737574 RGD:2317118, RGD:2317120 NCBI chr17:62,911,705...62,996,544
Ensembl chr17:62,911,771...62,996,541
JBrowse link
G Mtrr 5-methyltetrahydrofolate-homocysteine methyltransferase reductase susceptibility ISO DNA:polymorphism: :66A>G (human)
DNA:SNPs:intron, exon:rs162049, p.H595Y (rs10380) (human)
RGD PMID:18843018 PMID:18515090 RGD:2317118, RGD:2325772 NCBI chr 1:34,866,991...34,899,425
Ensembl chr 1:36,695,460...36,727,807
JBrowse link
G Muc1 mucin 1, cell surface associated disease_progression ISO protein:increased expression:pancreas
protein:increased secretion:bile
RGD PMID:14654947 PMID:18039393 PMID:18383873 PMID:19129927 PMID:19055478 More... RGD:2317984, RGD:2324639, RGD:2324637, RGD:2317987, RGD:2324622, RGD:2324635 NCBI chr 2:176,933,312...176,938,497
Ensembl chr 2:176,933,047...176,938,491
JBrowse link
G Muc16 mucin 16, cell surface associated ISO protein:increased expression:serum RGD PMID:19377061 RGD:2325129 NCBI chr 8:24,440,840...24,644,494 JBrowse link
G Muc4 mucin 4, cell surface associated disease_progression ISO mRNA:increased expression:peripheral blood mononuclear cell
protein:increased expression:pancreas
mRNA:increased expression:pancreas
RGD PMID:16274046 PMID:17595659 PMID:20303649 PMID:11751498 PMID:17406026 RGD:2324931, RGD:2324922, RGD:2324914, RGD:2324891, RGD:2324923 NCBI chr11:81,513,321...81,575,200 JBrowse link
G Muc5ac mucin 5AC, oligomeric mucus/gel-forming ISO protein:increased glycosylation:serum
protein:increased expression:pancreas
RGD PMID:19377061 PMID:14654947 RGD:2325129, RGD:2317984 NCBI chr 1:206,293,717...206,326,006
Ensembl chr 1:206,293,869...206,326,006
JBrowse link
G Muc6 mucin 6, oligomeric mucus/gel-forming ISO protein:increased expression: : RGD PMID:10209489 RGD:2325167 NCBI chr 1:196,726,678...196,764,842
Ensembl chr 1:206,155,593...206,191,864
JBrowse link
G Myc MYC proto-oncogene, bHLH transcription factor ISO CTD Direct Evidence: marker/mechanism CTD
RGD
PMID:25961927 PMID:22024988 RGD:7240699 NCBI chr 7:95,483,105...95,488,031
Ensembl chr 7:95,483,105...95,488,028
JBrowse link
G Nap1l1 nucleosome assembly protein 1-like 1 ISO human gene in a mouse model RGD PMID:25071868 RGD:9590074 NCBI chr 7:48,819,464...48,844,108
Ensembl chr 7:48,819,477...48,844,104
JBrowse link
G Nat1 N-acetyltransferase 1 susceptibility ISO DNA:polymorphism (human)
DNA:polymorphisms,haplotype: :
RGD PMID:18006927 PMID:18006927 PMID:18499698 RGD:2317170, RGD:2317170, RGD:2317168 NCBI chr16:26,984,882...27,005,194
Ensembl chr16:26,982,625...26,986,527
JBrowse link
G Nat2 N-acetyltransferase 2 susceptibility ISO DNA:polymorphism (human) RGD PMID:18027363 RGD:2317169 NCBI chr16:26,974,874...27,005,191
Ensembl chr16:26,974,601...26,976,304
JBrowse link
G Ncam1 neural cell adhesion molecule 1 severity
disease_progression
ISO RGD PMID:10374842 PMID:11249065 RGD:2326075, RGD:2326074 NCBI chr 8:58,762,088...59,062,131
Ensembl chr 8:58,762,116...59,061,971
JBrowse link
G Nfkbia NFKB inhibitor alpha ISO CTD Direct Evidence: therapeutic CTD PMID:15861417 NCBI chr 6:78,593,844...78,597,307
Ensembl chr 6:78,593,847...78,597,072
JBrowse link
G Ngfr nerve growth factor receptor severity ISO mRNA:increased expression:tumor:associated with longer overall survival (human) RGD PMID:16704535 RGD:5508229 NCBI chr10:81,012,077...81,030,305
Ensembl chr10:81,012,089...81,030,305
JBrowse link
G Nos2 nitric oxide synthase 2 disease_progression ISO protein:increased expression:pancreas RGD PMID:11196200 PMID:11687972 PMID:15165031 RGD:2325262, RGD:2325257, RGD:2325248 NCBI chr10:64,313,335...64,349,221
Ensembl chr10:64,313,335...64,401,880
JBrowse link
G Notch1 notch receptor 1 disease_progression ISO protein:increased expression:pancreas RGD PMID:17297654 RGD:2325328 NCBI chr 3:29,676,040...29,721,613
Ensembl chr 3:29,676,171...29,721,613
JBrowse link
G Nr4a1 nuclear receptor subfamily 4, group A, member 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:20660371 NCBI chr 7:134,247,153...134,268,044
Ensembl chr 7:134,247,192...134,268,041
JBrowse link
G Nr5a2 nuclear receptor subfamily 5, group A, member 2 ISO CTD Direct Evidence: marker/mechanism CTD PMID:20101243 PMID:26098869 NCBI chr13:48,313,634...48,433,494
Ensembl chr13:50,867,920...50,984,938
JBrowse link
G Nrp1 neuropilin 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:15956974 NCBI chr19:73,256,557...73,411,705
Ensembl chr19:73,256,557...73,411,702
JBrowse link
G Ntrk1 neurotrophic receptor tyrosine kinase 1 severity ISO mRNA:increased expression:tumor:associated with increased tumor aggressiveness (human) RGD PMID:16704535 RGD:5508229 NCBI chr 2:175,534,844...175,551,664
Ensembl chr 2:175,534,844...175,551,787
JBrowse link
G Nuf2 NUF2 component of NDC80 kinetochore complex treatment ISO mRNA:increased expression:pancreas RGD PMID:26045769 PMID:25370920 RGD:11058437, RGD:28867232 NCBI chr13:84,226,448...84,290,957
Ensembl chr13:84,226,509...84,255,598
JBrowse link
G Ogg1 8-oxoguanine DNA glycosylase disease_progression ISO DNA:polymorphism: :2657G>A (human)
DNA:polymorphism: :rs1052133 (human)
RGD PMID:17230526 PMID:18559563 RGD:2317132, RGD:2317130 NCBI chr 4:148,030,237...148,037,599
Ensembl chr 4:148,030,349...148,037,604
JBrowse link
G Palb2 partner and localizer of BRCA2 susceptibility ISO DNA:nonsense mutations:exon:172_175del, 3116del, 3256C>T (human)
ClinVar Annotator: match by term: Cancer of the pancreas | ClinVar Annotator: match by term: PANCREATIC CANCER, SUSCEPTIBILITY TO, 3 | ClinVar Annotator: match by term: PANCREATIC CANCER, SUSCEPTIBILITY TO, 4 | ClinVar Annotator: match by term: Pancreatic cancer, susceptibility to, 2 | ClinVar Annotator: match by term: Pancreatic cancer, susceptibility to, 3
ClinVar Annotator: match by term: Cancer of the pancreas | ClinVar Annotator: match by term: PANCREATIC CANCER, SUSCEPTIBILITY TO, 3 | ClinVar Annotator: match by term: Pancreatic cancer 3 | ClinVar Annotator: match by term: Pancreatic cancer, susceptibility to, 2 | ClinVar Annotator: match by term: Pancreatic cancer, susceptibility to, 3 | ClinVar Annotator: match by term: Pancreatic cancer, susceptibility to, 4
ClinVar Annotator: match by term: PANCREATIC CANCER, SUSCEPTIBILITY TO, 3 | ClinVar Annotator: match by term: Pancreatic cancer | ClinVar Annotator: match by term: Pancreatic cancer 3 | ClinVar Annotator: match by term: Pancreatic cancer, susceptibility to, 3
ClinVar Annotator: match by term: PANCREATIC CANCER, SUSCEPTIBILITY TO, 3 | ClinVar Annotator: match by term: Pancreatic cancer | ClinVar Annotator: match by term: Pancreatic cancer 3 | ClinVar Annotator: match by term: Pancreatic cancer, susceptibility to, 2 | ClinVar Annotator: match by term: Pancreatic cancer, susceptibility to, 3
ClinVar Annotator: match by term: Cancer of the pancreas | ClinVar Annotator: match by term: PANCREATIC CANCER, SUSCEPTIBILITY TO, 3 | ClinVar Annotator: match by term: Pancreatic cancer 3 | ClinVar Annotator: match by term: Pancreatic cancer, susceptibility to, 1 | ClinVar Annotator: match by term: Pancreatic cancer, susceptibility to, 3
ClinVar Annotator: match by term: Cancer of the pancreas | ClinVar Annotator: match by term: PANCREATIC CANCER, SUSCEPTIBILITY TO, 3 | ClinVar Annotator: match by term: Pancreatic cancer 3 | ClinVar Annotator: match by term: Pancreatic cancer, susceptibility to, 3 | ClinVar Annotator: match by term: Pancreatic cancer, susceptibility to, 4
ClinVar Annotator: match by term: Cancer of the pancreas | ClinVar Annotator: match by term: PANCREATIC CANCER, SUSCEPTIBILITY TO, 3 | ClinVar Annotator: match by term: Pancreatic cancer, susceptibility to, 3
ClinVar Annotator: match by term: Cancer of the pancreas | ClinVar Annotator: match by term: PANCREATIC CANCER, SUSCEPTIBILITY TO, 3 | ClinVar Annotator: match by term: Pancreatic cancer, susceptibility to, 1 | ClinVar Annotator: match by term: Pancreatic cancer, susceptibility to, 3
ClinVar Annotator: match by term: Cancer of the pancreas | ClinVar Annotator: match by term: PANCREATIC CANCER, SUSCEPTIBILITY TO, 1 | ClinVar Annotator: match by term: PANCREATIC CANCER, SUSCEPTIBILITY TO, 3 | ClinVar Annotator: match by term: Pancreatic cancer 3
CTD Direct Evidence: marker/mechanism
OMIM
ClinVar
CTD
RGD
PMID:100849 PMID:1378620 PMID:9536098 PMID:16199547 PMID:17200668 More... RGD:2325776 NCBI chr 1:186,096,312...186,120,284
Ensembl chr 1:186,096,312...186,120,302
JBrowse link
G Palld palladin, cytoskeletal associated protein susceptibility ISO DNA, mRNA:missense mutation, increased expression:pancreas:p.P239S (human)
ClinVar Annotator: match by term: PALLD-related condition | ClinVar Annotator: match by term: PANCREATIC CANCER, SUSCEPTIBILITY TO, 3 | ClinVar Annotator: match by term: Pancreatic cancer, susceptibility to, 1 | ClinVar Annotator: match by term: Pancreatic cancer, susceptibility to, 2
ClinVar Annotator: match by term: PALLD-related condition | ClinVar Annotator: match by term: Pancreatic cancer, susceptibility to, 1 | ClinVar Annotator: match by term: Pancreatic cancer, susceptibility to, 2 | ClinVar Annotator: match by term: Pancreatic cancer, susceptibility to, 3
ClinVar Annotator: match by term: PANCREATIC CANCER, SUSCEPTIBILITY TO, 2 | ClinVar Annotator: match by term: Pancreatic cancer, susceptibility to, 1
CTD Direct Evidence: marker/mechanism
protein:increased expression, alternative form:pancreas, fibroblast
ClinVar
CTD
OMIM
RGD
PMID:10454945 PMID:11474289 PMID:17194196 PMID:17415588 PMID:24033266 More... RGD:2325782, RGD:2325779 NCBI chr16:33,238,943...33,632,236
Ensembl chr16:33,238,956...33,632,232
JBrowse link
G Pbrm1 polybromo 1 ISO RGD PMID:23355908 RGD:8694154 NCBI chr16:6,219,933...6,319,336
Ensembl chr16:6,219,917...6,319,336
JBrowse link
G Pdgfra platelet derived growth factor receptor alpha ISO mRNA:increased expression:pancreas RGD PMID:7665222 PMID:14695158 RGD:2324851, RGD:2324850 NCBI chr14:33,360,027...33,408,604
Ensembl chr14:33,360,028...33,408,516
JBrowse link
G Pdx1 pancreatic and duodenal homeobox 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:19077462 PMID:25086665 PMID:26098869 NCBI chr12:12,793,957...12,799,156
Ensembl chr12:12,793,957...12,799,156
JBrowse link
G Pfn1 profilin 1 ISO RGD PMID:16215274 RGD:2317552 NCBI chr10:55,863,882...55,866,587
Ensembl chr10:55,863,881...55,868,611
JBrowse link
G Plau plasminogen activator, urokinase ISO CTD Direct Evidence: marker/mechanism CTD PMID:10467400 NCBI chr15:3,505,485...3,511,987
Ensembl chr15:3,505,487...3,512,030
JBrowse link
G Polb DNA polymerase beta disease_progression ISO DNA:polymorphisms: :165A>G, 2133T>C (human) RGD PMID:17230526 RGD:2317132 NCBI chr16:76,081,903...76,105,174
Ensembl chr16:76,081,864...76,108,180
JBrowse link
G Ppard peroxisome proliferator-activated receptor delta disease_progression ISO RGD PMID:17652168 PMID:17652168 RGD:2324872, RGD:2324872 NCBI chr20:6,300,527...6,365,707
Ensembl chr20:6,352,183...6,365,707
JBrowse link
G Pparg peroxisome proliferator-activated receptor gamma susceptibility ISO DNA:polymorphism: :p.P12A (human)
CTD Direct Evidence: marker/mechanism|therapeutic
CTD
RGD
PMID:11034103 PMID:11741176 PMID:19436234 PMID:19152448 RGD:2317460, RGD:2317462 NCBI chr 4:150,095,743...150,221,104
Ensembl chr 4:150,095,787...150,221,104
JBrowse link
G Ptch1 patched 1 ISO protein:increased expression:pancreas
CTD Direct Evidence: marker/mechanism
CTD
RGD
PMID:19077462 PMID:19396459 RGD:2324910 NCBI chr17:1,548,449...1,613,461
Ensembl chr17:1,548,449...1,613,461
JBrowse link
G Pten phosphatase and tensin homolog ISO CTD Direct Evidence: marker/mechanism CTD
RGD
PMID:19917848 PMID:19506583 RGD:5490965 NCBI chr 1:240,043,707...240,110,330
Ensembl chr 1:240,043,707...240,110,330
JBrowse link
G Ptgs2 prostaglandin-endoperoxide synthase 2 susceptibility ISO mRNA, protein:increased expression:pancreas
CTD Direct Evidence: marker/mechanism
DNA:SNPs: :-1195A > G, -765G > C (human)
DNA:polymorphisms: :-1195A>A ,-765G>C (human)
CTD
RGD
PMID:10485483 PMID:10657949 PMID:15705899 PMID:16820089 PMID:19820419 More... RGD:2317179, RGD:5135527, RGD:2317175, RGD:2317184 NCBI chr13:64,714,063...64,722,320
Ensembl chr13:64,713,619...64,722,320
JBrowse link
G Pthlh parathyroid hormone-like hormone ISO CTD Direct Evidence: marker/mechanism CTD PMID:17625444 NCBI chr 4:181,919,400...181,930,454
Ensembl chr 4:181,919,400...181,930,454
JBrowse link
G Rabl3 RAB, member of RAS oncogene family-like 3 susceptibility ISO ClinVar Annotator: match by term: Pancreatic cancer, susceptibility to, 5 | ClinVar Annotator: match by term: RABL3-related condition
CTD Direct Evidence: marker/mechanism
ClinVar
CTD
OMIM
PMID:31406347 NCBI chr11:76,658,723...76,687,681
Ensembl chr11:76,658,723...76,687,940
JBrowse link
G Rad51 RAD51 recombinase IEP protein:increased expression:pancreas (rat) RGD PMID:20197614 RGD:9831172 NCBI chr 3:126,554,210...126,578,888
Ensembl chr 3:126,554,190...126,579,469
JBrowse link
G Rad54l RAD54 like ISO DNA:SNP:exon:rs1048771 (human) RGD PMID:16540687 RGD:2317365 NCBI chr 5:134,812,158...134,841,821
Ensembl chr 5:134,811,532...134,841,425
JBrowse link
G Rap1gap Rap1 GTPase-activating protein ISO mRNA:decreased expression:pancreas (human)
CTD Direct Evidence: marker/mechanism
CTD
RGD
PMID:22614916 PMID:16424023 RGD:9835037 NCBI chr 5:155,157,511...155,222,622
Ensembl chr 5:155,157,558...155,222,622
JBrowse link
G Rb1 RB transcriptional corepressor 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:21699781 NCBI chr15:54,780,858...54,911,989
Ensembl chr15:54,780,858...54,911,857
JBrowse link
G Recql RecQ like helicase ISO DNA:SNPs:introns
DNA:SNP:3'utr:rs13035 (human)
RGD PMID:18422747 PMID:19768149 PMID:16540687 RGD:2317370, RGD:2317369, RGD:2317365 NCBI chr 4:177,039,351...177,063,968
Ensembl chr 4:177,035,128...177,063,838
JBrowse link
G Rela RELA proto-oncogene, NF-kB subunit ISO RGD PMID:9918209 RGD:2298892 NCBI chr 1:212,354,336...212,364,815
Ensembl chr 1:212,333,035...212,364,817
JBrowse link
G Ret ret proto-oncogene disease_progression ISO protein:increased expression:pancreas RGD PMID:16269310 RGD:2324926 NCBI chr 4:152,998,344...153,040,556
Ensembl chr 4:152,998,812...153,040,556
JBrowse link
G Rhbdd1 rhomboid domain containing 1 ISO CTD Direct Evidence: therapeutic CTD PMID:35442567 NCBI chr 9:83,630,037...83,748,690
Ensembl chr 9:91,078,210...91,196,850
JBrowse link
G Rrm2 ribonucleotide reductase regulatory subunit M2 ISO RGD PMID:19568409 RGD:2324950 NCBI chr 6:47,044,755...47,075,370
Ensembl chr 6:47,067,690...47,075,370
JBrowse link
G Runx3 RUNX family transcription factor 3 disease_progression ISO DNA:hypermethylation, loss of heterozygosity (human) RGD PMID:18475302 RGD:2324956 NCBI chr 5:152,644,270...152,702,835
Ensembl chr 5:152,644,270...152,702,835
JBrowse link
G Rxra retinoid X receptor alpha ISO RGD PMID:19152448 RGD:2317462 NCBI chr 3:31,387,892...31,474,415
Ensembl chr 3:31,388,223...31,474,417
JBrowse link
G Sel1l SEL1L adaptor subunit of SYVN1 ubiquitin ligase ISO RGD PMID:14508516 RGD:2317190 NCBI chr 6:116,466,163...116,510,436
Ensembl chr 6:116,466,163...116,510,578
JBrowse link
G Serpina1 serpin family A member 1 disease_progression ISO RGD PMID:2323846 RGD:2324960 NCBI chr 6:128,631,101...128,653,125
Ensembl chr 6:128,619,382...128,660,703
JBrowse link
G Sf3b4 splicing factor 3B subunit 4 ISO mRNA, protein:decreased expression:pancreas (human) RGD PMID:28351319 RGD:155804299 NCBI chr 2:186,421,667...186,426,419
Ensembl chr 2:186,421,636...186,426,833
JBrowse link
G Shh sonic hedgehog signaling molecule ISO RGD PMID:19506583 RGD:5490965 NCBI chr 4:7,687,872...7,697,025
Ensembl chr 4:7,687,846...7,697,901
JBrowse link
G Sinhcaf SIN3-HDAC complex associated factor ISO CTD Direct Evidence: marker/mechanism CTD PMID:35213078 NCBI chr 4:181,888,301...181,913,294
Ensembl chr 4:183,619,658...183,641,626
JBrowse link
G Slc1a5 solute carrier family 1 member 5 ISO CTD Direct Evidence: marker/mechanism CTD PMID:35929395 NCBI chr 1:86,584,949...86,599,052
Ensembl chr 1:86,584,949...86,599,054
JBrowse link
G Slc29a1 solute carrier family 29 member 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:18728667 NCBI chr 9:22,897,099...22,911,640
Ensembl chr 9:22,902,471...22,914,620
JBrowse link
G Slco2b1 solute carrier organic anion transporter family, member 2b1 ISO mRNA:decreased expression:pancreas (human) RGD PMID:21625523 RGD:152995425 NCBI chr 1:163,371,410...163,419,412
Ensembl chr 1:163,371,410...163,419,279
JBrowse link
G Smad2 SMAD family member 2 ISO mRNA:increased expression:pancreas (human) RGD PMID:10505717 RGD:14394490 NCBI chr18:72,124,792...72,193,345
Ensembl chr18:72,124,863...72,187,388
JBrowse link
G Smad3 SMAD family member 3 ISO DNA:mutations:exon RGD PMID:18772397 RGD:5490966 NCBI chr 8:73,022,204...73,132,324
Ensembl chr 8:73,024,760...73,132,324
JBrowse link
G Smad4 SMAD family member 4 ISO CTD Direct Evidence: marker/mechanism
ClinVar Annotator: match by term: Cancer of the pancreas
DNA:mutations:exon
OMIM
CTD
ClinVar
RGD
PMID:25741868 PMID:18772397 RGD:5490966 NCBI chr18:69,518,988...69,549,684
Ensembl chr18:69,518,988...69,549,684
JBrowse link
G Smad7 SMAD family member 7 ISO mRNA:increased expression:pancreas (human) RGD PMID:10498890 RGD:14394510 NCBI chr18:71,263,508...71,291,849
Ensembl chr18:71,263,508...71,291,849
JBrowse link
G Smarca4 SWI/SNF related BAF chromatin remodeling complex subunit ATPase 4 ISO RGD PMID:23355908 RGD:8694154 NCBI chr 8:28,438,370...28,535,071
Ensembl chr 8:28,443,810...28,535,070
JBrowse link
G Smo smoothened, frizzled class receptor treatment ISO protein:increased expression:pancreas RGD PMID:19460966 PMID:22859707 PMID:19396459 RGD:2324978, RGD:150340554, RGD:2324910 NCBI chr 4:59,311,084...59,341,280
Ensembl chr 4:59,311,041...59,341,281
JBrowse link
G Smurf1 SMAD specific E3 ubiquitin protein ligase 1 ISO RGD PMID:17726579 RGD:2302550 NCBI chr12:14,748,717...14,840,273
Ensembl chr12:14,749,043...14,840,273
JBrowse link
G Sncg synuclein, gamma ISO RGD PMID:15221989 RGD:6478801 NCBI chr16:9,706,765...9,712,072
Ensembl chr16:9,706,753...9,712,076
JBrowse link
G Snw1 SNW domain containing 1 susceptibility ISO DNA:snp:intron: T>A (human) (rs1477261) RGD PMID:20056645 RGD:11035249 NCBI chr 6:112,826,374...112,850,459
Ensembl chr 6:112,826,381...112,858,180
JBrowse link
G Sod1 superoxide dismutase 1 ISO protein:decreased expression:pancreas RGD PMID:12499913 RGD:2317410 NCBI chr11:42,942,742...42,948,399
Ensembl chr11:42,942,678...42,948,399
JBrowse link
G Sod2 superoxide dismutase 2 disease_progression
susceptibility
ISO protein:decreased expression:pancreas
CTD Direct Evidence: marker/mechanism
DNA:polymorphism:cds:p.A16V (human)
CTD
RGD
PMID:11328670 PMID:17895890 PMID:12499913 PMID:12700280 PMID:18205184 RGD:2317410, RGD:1581235, RGD:2317406 NCBI chr 1:50,043,323...50,050,168
Ensembl chr 1:50,043,325...50,050,168
JBrowse link
G Spink1 serine peptidase inhibitor, Kazal type 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:19896093 NCBI chr18:36,121,626...36,133,596
Ensembl chr18:36,076,399...36,133,545
JBrowse link
G Spp1 secreted phosphoprotein 1 ISO RGD PMID:15970685 RGD:1581363 NCBI chr14:5,613,569...5,620,695
Ensembl chr14:5,613,576...5,619,820
JBrowse link
G Sst somatostatin ISO CTD Direct Evidence: therapeutic CTD PMID:2868874 NCBI chr11:90,461,546...90,462,823
Ensembl chr11:90,461,546...90,462,823
JBrowse link
G Sstr1 somatostatin receptor 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:17625444 NCBI chr 6:81,567,237...81,571,759
Ensembl chr 6:81,566,850...81,571,992
JBrowse link
G Sstr2 somatostatin receptor 2 ISO CTD Direct Evidence: marker/mechanism|therapeutic CTD PMID:15259086 PMID:17625444 PMID:19917848 NCBI chr10:99,163,353...99,170,519
Ensembl chr10:99,162,740...99,183,863
JBrowse link
G Sstr3 somatostatin receptor 3 ISO CTD Direct Evidence: marker/mechanism CTD PMID:17625444 NCBI chr 7:111,973,049...111,980,250
Ensembl chr 7:111,972,811...111,997,368
JBrowse link
G Stat3 signal transducer and activator of transcription 3 ISO CTD Direct Evidence: marker/mechanism CTD PMID:22348037 PMID:23845849 NCBI chr10:86,311,528...86,363,513
Ensembl chr10:86,311,535...86,363,359
JBrowse link
G Stk11 serine/threonine kinase 11 ISO CTD Direct Evidence: marker/mechanism OMIM
CTD
PMID:26098869 NCBI chr 7:10,225,204...10,241,965
Ensembl chr 7:10,225,204...10,241,965
JBrowse link
G Sugct succinylCoA:glutarate-CoA transferase ISO CTD Direct Evidence: marker/mechanism CTD PMID:26098869 NCBI chr17:52,072,012...52,929,852
Ensembl chr17:52,072,052...52,930,281
JBrowse link
G Sycp1 synaptonemal complex protein 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:14991579 NCBI chr 2:192,985,164...193,145,234
Ensembl chr 2:192,984,621...193,145,421
JBrowse link
G Tcf7l2 transcription factor 7 like 2 ISO DNA:mutations:exon RGD PMID:18772397 RGD:5490966 NCBI chr 1:264,791,335...264,984,225
Ensembl chr 1:264,791,335...264,984,225
JBrowse link
G Tert telomerase reverse transcriptase ISO CTD Direct Evidence: marker/mechanism CTD PMID:25086665 PMID:26098869 NCBI chr 1:31,465,766...31,488,650
Ensembl chr 1:31,466,056...31,488,111
JBrowse link
G Tfpi2 tissue factor pathway inhibitor 2 ISO CTD Direct Evidence: marker/mechanism CTD PMID:16965396 NCBI chr 4:32,936,462...32,941,385
Ensembl chr 4:32,936,854...32,941,426
JBrowse link
G Tgfa transforming growth factor alpha ISO
IMP
mRNA, protein:increased expression:pancreas RGD PMID:1401070 PMID:19506583 PMID:17785207 RGD:2317473, RGD:5490965, RGD:2317468 NCBI chr 4:120,175,549...120,258,342
Ensembl chr 4:120,175,593...120,258,339
JBrowse link
G Tgfb1 transforming growth factor, beta 1 disease_progression ISO CTD Direct Evidence: marker/mechanism
protein:increased expression:serum
CTD
RGD
PMID:23992306 PMID:18787407 PMID:16933058 RGD:2325015, RGD:2325018 NCBI chr 1:90,324,312...90,340,627
Ensembl chr 1:90,324,046...90,340,899
JBrowse link
G Tgfbr2 transforming growth factor, beta receptor 2 disease_progression ISO DNA:deletion, frameshift mutations (human)
DNA:mutations:exon
protein:increased expresssion:pancreas
mRNA:increased expresssion:pancreas
RGD PMID:9850059 PMID:18772397 PMID:11866987 PMID:9365135 RGD:2317501, RGD:5490966, RGD:2317499, RGD:2317502 NCBI chr 8:124,672,677...124,761,741
Ensembl chr 8:124,674,986...124,761,469
JBrowse link
G Tgm2 transglutaminase 2 ISO CTD Direct Evidence: marker/mechanism CTD PMID:30108682 NCBI chr 3:167,192,612...167,221,845
Ensembl chr 3:167,192,612...167,304,240
JBrowse link
G Thbs1 thrombospondin 1 disease_progression ISO DNA:hypermethylation (human) RGD PMID:10766168 PMID:20203415 PMID:16757110 RGD:2325028, RGD:2325021, RGD:2325023 NCBI chr 3:125,510,250...125,525,402
Ensembl chr 3:125,510,250...125,525,402
JBrowse link
G Tnf tumor necrosis factor ISO CTD Direct Evidence: therapeutic CTD PMID:16211219 NCBI chr20:3,626,685...3,629,303
Ensembl chr20:3,626,532...3,629,303
JBrowse link
G Tnfsf10 TNF superfamily member 10 ISO CTD Direct Evidence: therapeutic CTD PMID:11234897 NCBI chr 2:112,136,550...112,155,903 JBrowse link
G Tp53 tumor protein p53 ISO DNA:mutations:exon
CTD Direct Evidence: marker/mechanism
CTD
RGD
PMID:23873029 PMID:26390243 PMID:18772397 RGD:5490966 NCBI chr10:54,798,871...54,810,300
Ensembl chr10:54,798,851...54,810,299
JBrowse link
G Tp53bp1 tumor protein p53 binding protein 1 ISO RGD PMID:11585747 RGD:2325154 NCBI chr 3:128,620,320...128,724,716
Ensembl chr 3:128,620,322...128,696,747
JBrowse link
G Tp63 tumor protein p63 ISO CTD Direct Evidence: marker/mechanism CTD PMID:26098869 NCBI chr11:88,343,647...88,554,543
Ensembl chr11:88,343,651...88,554,177
JBrowse link
G Tsc2 TSC complex subunit 2 ISO CTD Direct Evidence: marker/mechanism CTD PMID:19917848 NCBI chr10:14,125,679...14,160,317
Ensembl chr10:14,125,680...14,160,600
JBrowse link
G Tymp thymidine phosphorylase ISO CTD Direct Evidence: marker/mechanism CTD
RGD
PMID:17443278 PMID:19671868 RGD:2325156 NCBI chr 7:122,318,396...122,323,716
Ensembl chr 7:122,316,520...122,324,003
JBrowse link
G Tyms thymidylate synthetase ISO CTD Direct Evidence: marker/mechanism CTD PMID:19020767 NCBI chr 9:120,760,057...120,776,149
Ensembl chr 9:120,763,386...120,776,097
JBrowse link
G Uck2 uridine-cytidine kinase 2 ISO protein:increased expression:pancreatic neoplasm (human) RGD PMID:12149149 RGD:5133269 NCBI chr13:81,913,732...81,971,036
Ensembl chr13:81,916,818...81,971,091
JBrowse link
G Ugt1a7c UDP glucuronosyltransferase 1 family, polypeptide A7C no_association ISO DNA:polymorphisms: :p.N129K, p.R131K, p.W208R (human)
DNA:polymorphisms: :multiple (human)
RGD PMID:12806614 PMID:17072959 RGD:2317503, RGD:2317157 NCBI chr 9:88,739,577...88,808,465
Ensembl chr 9:96,144,786...96,256,264
JBrowse link
G Vcam1 vascular cell adhesion molecule 1 ISO RGD PMID:17652277 RGD:2325162 NCBI chr 2:206,723,050...206,742,783
Ensembl chr 2:206,723,044...206,742,801
JBrowse link
G Vegfb vascular endothelial growth factor B ISO CTD Direct Evidence: marker/mechanism CTD PMID:24604347 NCBI chr 1:213,601,570...213,607,254
Ensembl chr 1:213,600,966...213,607,152
JBrowse link
G Vhl von Hippel-Lindau tumor suppressor ISO DNA:hypermethylation, deletion:promoter (human)
associated with Hippel-Lindau Disease;DNA:missense mutation:exon:p.R238Q (human)
RGD PMID:19690016 PMID:9488521 RGD:2325169, RGD:2325176 NCBI chr 4:148,328,099...148,334,992
Ensembl chr 4:148,328,079...148,334,991
JBrowse link
G Wnt9a Wnt family member 9A ISO DNA:mutations:exon RGD PMID:18772397 RGD:5490966 NCBI chr10:44,593,691...44,620,682
Ensembl chr10:44,593,691...44,620,682
JBrowse link
G Wt1 WT1 transcription factor ISO CTD Direct Evidence: marker/mechanism CTD PMID:19196508 NCBI chr 3:112,019,721...112,068,454
Ensembl chr 3:112,021,641...112,068,444
JBrowse link
G Xpc XPC complex subunit, DNA damage recognition and repair factor ISO DNA:polymorphism:intron:AF076952 (human) RGD PMID:18559563 RGD:2317130 NCBI chr 4:125,550,833...125,578,084
Ensembl chr 4:125,550,833...125,578,305
JBrowse link
G Xpo1 exportin 1 exacerbates ISO protein:increased expression:pancreas (human) RGD PMID:20003838 RGD:151665797 NCBI chr14:101,434,450...101,476,705
Ensembl chr14:101,434,517...101,476,714
JBrowse link
G Xpo5 exportin 5 ISO mRNA:decreased expression:pancreas (mouse) RGD PMID:26516699 RGD:11041739 NCBI chr 9:14,740,182...14,778,171
Ensembl chr 9:22,237,760...22,275,745
JBrowse link
G Xrcc1 X-ray repair cross complementing 1 ISO DNA:SNP:exon:rs1799782 (human) RGD PMID:16520463 RGD:2317367 NCBI chr 1:89,268,721...89,296,619
Ensembl chr 1:89,268,644...89,296,613
JBrowse link
G Xrcc2 X-ray repair cross complementing 2 ISO DNA:polymorphism: :p.R188H (human)
DNA:SNP:exon:rs3218536 (human)
RGD PMID:17986315 PMID:16540687 RGD:2317507, RGD:2317365 NCBI chr 4:10,157,130...10,237,089
Ensembl chr 4:10,157,800...10,176,407
JBrowse link
G Xrcc3 X-ray repair cross complementing 3 ISO DNA:SNP:cd:rs861539 (human) RGD PMID:18559563 RGD:2317130 NCBI chr 6:136,684,558...136,694,822
Ensembl chr 6:136,684,558...136,694,822
JBrowse link
G Znrf3 zinc and ring finger 3 ISO CTD Direct Evidence: marker/mechanism CTD PMID:25086665 PMID:26098869 NCBI chr14:80,157,854...80,313,456
Ensembl chr14:84,374,412...84,527,448
JBrowse link
pancreatic carcinoma term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acvr1b activin A receptor type 1B ISO ClinVar Annotator: match by term: Carcinoma of pancreas ClinVar PMID:11248065 NCBI chr 7:134,164,987...134,208,389
Ensembl chr 7:134,164,991...134,208,388
JBrowse link
G Atm ATM serine/threonine kinase ISO ClinVar Annotator: match by term: Carcinoma of pancreas | ClinVar Annotator: match by term: PANCREATIC CARCINOMA ClinVar PMID:988733 PMID:1849795 PMID:3338800 PMID:8808599 PMID:9443866 More... NCBI chr 8:62,724,939...62,829,040
Ensembl chr 8:62,727,291...62,828,629
JBrowse link
G Brca1 BRCA1, DNA repair associated ISO ClinVar Annotator: match by term: Carcinoma of head of pancreas | ClinVar Annotator: match by term: Carcinoma of pancreas ClinVar PMID:9150174 PMID:10667592 PMID:10667595 PMID:11802209 PMID:12566964 More... NCBI chr10:86,917,693...86,978,012
Ensembl chr10:86,917,693...86,977,763
JBrowse link
G Brca2 BRCA2, DNA repair associated ISO ClinVar Annotator: match by term: Carcinoma of pancreas | ClinVar Annotator: match by term: PANCREATIC CARCINOMA ClinVar PMID:8665505 PMID:9150150 PMID:9361038 PMID:9536098 PMID:9585613 More... NCBI chr12:4,895,092...4,939,340
Ensembl chr12:4,895,447...4,936,194
JBrowse link
G Brip1 BRCA1 interacting DNA helicase 1 ISO ClinVar Annotator: match by term: Carcinoma of pancreas ClinVar PMID:16116423 PMID:17033622 PMID:21964575 PMID:25330149 PMID:25741868 More... NCBI chr10:71,402,035...71,528,083
Ensembl chr10:71,401,151...71,575,206
JBrowse link
G C8h11orf65 similar to human chromosome 11 open reading frame 65 ISO ClinVar Annotator: match by term: Carcinoma of pancreas | ClinVar Annotator: match by term: PANCREATIC CARCINOMA ClinVar PMID:988733 PMID:1849795 PMID:3338800 PMID:8808599 PMID:9443866 More... NCBI chr 8:62,692,123...62,720,951
Ensembl chr 8:62,692,568...62,720,946
JBrowse link
G Cbr4 carbonyl reductase 4 ISO ClinVar Annotator: match by term: Carcinoma of pancreas ClinVar PMID:17194196 PMID:25741868 PMID:28492532 NCBI chr16:33,625,734...33,695,067
Ensembl chr16:33,617,399...33,656,832
JBrowse link
G Cdkn1a cyclin-dependent kinase inhibitor 1A ISO RGD PMID:9252195 RGD:8662427 NCBI chr20:7,150,820...7,161,373
Ensembl chr20:7,153,958...7,164,969
JBrowse link
G Cdkn2a cyclin-dependent kinase inhibitor 2A susceptibility ISO DNA:insertion:cds:p.R112_L113insR (human) RGD PMID:10922411 RGD:8552383 NCBI chr 5:109,100,763...109,114,448
Ensembl chr 5:109,100,772...109,119,248
JBrowse link
G Chd3 chromodomain helicase DNA binding protein 3 disease_progression IEP protein:increased expression:pancreas RGD PMID:21472101 RGD:9587766 NCBI chr10:54,562,437...54,588,842
Ensembl chr10:54,562,437...54,588,810
JBrowse link
G Chek2 checkpoint kinase 2 ISO ClinVar Annotator: match by term: Carcinoma of pancreas | ClinVar Annotator: match by term: PANCREATIC CARCINOMA ClinVar PMID:9536098 PMID:10617473 PMID:11053450 PMID:11479205 PMID:11719428 More... NCBI chr12:51,448,838...51,481,159
Ensembl chr12:51,449,140...51,480,667
JBrowse link
G Ercc4 ERCC excision repair 4, endonuclease catalytic subunit ISO ClinVar Annotator: match by term: PANCREATIC CARCINOMA ClinVar PMID:8797827 PMID:9579555 PMID:20221251 PMID:21228398 PMID:21612988 More... NCBI chr10:2,926,085...2,958,176
Ensembl chr10:2,920,455...2,955,539
JBrowse link
G Fance FA complementation group E ISO ClinVar Annotator: match by term: Carcinoma of pancreas ClinVar PMID:11001585 PMID:17924555 PMID:21279724 PMID:25741868 PMID:26822949 More... NCBI chr20:6,371,153...6,388,366
Ensembl chr20:6,377,234...6,388,365
JBrowse link
G Fancg FA complementation group G ISO ClinVar Annotator: match by term: Carcinoma of pancreas ClinVar NCBI chr 5:62,027,494...62,037,202
Ensembl chr 5:62,027,500...62,035,787
JBrowse link
G Hnrnpa2b1 heterogeneous nuclear ribonucleoprotein A2/B1 severity IEP protein:increased expression:pancreas (rat) RGD PMID:21472101 RGD:9587766 NCBI chr 4:81,867,354...81,875,886
Ensembl chr 4:81,869,661...81,877,572
JBrowse link
G Hoxb13 homeo box B13 ISO ClinVar Annotator: match by term: PANCREATIC CARCINOMA ClinVar PMID:8756292 PMID:15964834 PMID:17138648 PMID:22236224 PMID:22714738 More... NCBI chr10:81,657,074...81,659,347
Ensembl chr10:81,657,074...81,659,347
JBrowse link
G Kdr kinase insert domain receptor treatment ISO RGD PMID:17414626 RGD:126848809 NCBI chr14:32,572,031...32,615,204
Ensembl chr14:32,572,049...32,615,192
JBrowse link
G Kras KRAS proto-oncogene, GTPase ISS
ISO
OMIM:260350
ClinVar Annotator: match by term: Carcinoma of pancreas | ClinVar Annotator: match by term: PANCREATIC CARCINOMA
MouseDO
ClinVar
PMID:1875403 PMID:7773929 PMID:8439212 PMID:12720172 PMID:15093544 More... NCBI chr 4:179,916,255...179,949,613
Ensembl chr 4:179,919,802...179,949,320
JBrowse link
G Mir155 microRNA 155 ISO miRNA:increased expression:serum RGD PMID:28660759 RGD:24922217 NCBI chr11:37,261,114...37,261,178
Ensembl chr11:37,261,114...37,261,178
JBrowse link
G Mtor mechanistic target of rapamycin kinase treatment ISO RGD PMID:25425965 RGD:11570510 NCBI chr 5:164,167,985...164,277,438
Ensembl chr 5:164,167,928...164,277,435
JBrowse link
G Myc MYC proto-oncogene, bHLH transcription factor ISS OMIM:260350 MouseDO NCBI chr 7:95,483,105...95,488,031
Ensembl chr 7:95,483,105...95,488,028
JBrowse link
G Nbn nibrin ISO ClinVar Annotator: match by term: PANCREATIC CARCINOMA ClinVar PMID:9590180 PMID:9590181 PMID:9620777 PMID:10398434 PMID:10799436 More... NCBI chr 5:34,256,678...34,291,163
Ensembl chr 5:34,256,627...34,291,162
JBrowse link
G Palb2 partner and localizer of BRCA2 ISO ClinVar Annotator: match by term: PANCREATIC CARCINOMA ClinVar PMID:17200668 PMID:17200671 PMID:17200672 PMID:20122277 PMID:20412113 More... NCBI chr 1:186,096,312...186,120,284
Ensembl chr 1:186,096,312...186,120,302
JBrowse link
G Palld palladin, cytoskeletal associated protein ISO ClinVar Annotator: match by term: Carcinoma of pancreas ClinVar PMID:17194196 PMID:25741868 PMID:28492532 NCBI chr16:33,238,943...33,632,236
Ensembl chr16:33,238,956...33,632,232
JBrowse link
G Pold1 DNA polymerase delta 1, catalytic subunit ISO ClinVar Annotator: match by term: Carcinoma of pancreas ClinVar NCBI chr 1:104,161,984...104,178,074
Ensembl chr 1:104,162,016...104,172,982
JBrowse link
G Raf1 Raf-1 proto-oncogene, serine/threonine kinase IEP mRNA:increased expression:pancreas (rat) RGD PMID:2278633 RGD:14392892 NCBI chr 4:150,352,158...150,412,813
Ensembl chr 4:150,352,160...150,412,813
JBrowse link
G Rbbp8 RB binding protein 8, endonuclease ISO ClinVar Annotator: match by term: Carcinoma of pancreas ClinVar PMID:9811458 PMID:28492532 NCBI chr18:3,198,188...3,263,643
Ensembl chr18:3,197,310...3,263,985
JBrowse link
G Smad4 SMAD family member 4 ISO ClinVar Annotator: match by term: Carcinoma of pancreas | ClinVar Annotator: match by term: PANCREATIC CARCINOMA ClinVar PMID:8653691 PMID:9582123 PMID:9811934 PMID:10398437 PMID:10764709 More... NCBI chr18:69,518,988...69,549,684
Ensembl chr18:69,518,988...69,549,684
JBrowse link
G Stk11 serine/threonine kinase 11 ISO ClinVar Annotator: match by term: Carcinoma of pancreas | ClinVar Annotator: match by term: PANCREATIC CARCINOMA ClinVar PMID:10362809 PMID:11430832 PMID:15188174 PMID:15800014 PMID:16287113 More... NCBI chr 7:10,225,204...10,241,965
Ensembl chr 7:10,225,204...10,241,965
JBrowse link
G Tp53 tumor protein p53 ISO ClinVar Annotator: match by term: Carcinoma of pancreas | ClinVar Annotator: match by term: PANCREATIC CARCINOMA ClinVar PMID:1565143 PMID:1565144 PMID:1581912 PMID:1591732 PMID:1631137 More... NCBI chr10:54,798,871...54,810,300
Ensembl chr10:54,798,851...54,810,299
JBrowse link
G Tsc1 TSC complex subunit 1 ISO RGD PMID:25425965 RGD:11570510 NCBI chr 3:32,367,434...32,416,565
Ensembl chr 3:32,367,670...32,416,568
JBrowse link
Pancreatic Cyst term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Il1b interleukin 1 beta disease_progression ISO RGD PMID:21266527 RGD:7794719 NCBI chr 3:137,030,200...137,036,581
Ensembl chr 3:137,030,205...137,036,601
JBrowse link
G Pkd1 polycystin 1, transient receptor potential channel interacting ISO ClinVar Annotator: match by term: Pancreatic cysts ClinVar PMID:25741868 NCBI chr10:14,077,733...14,125,682
Ensembl chr10:14,078,679...14,125,681
JBrowse link
G Pkhd1 PKHD1 ciliary IPT domain containing fibrocystin/polyductin ISO DNA:deletion:exon: RGD PMID:17519956 PMID:18202188 RGD:14700917, RGD:14700921 NCBI chr 9:30,040,466...30,533,834
Ensembl chr 9:30,046,038...30,533,935
JBrowse link
pancreatic ductal adenocarcinoma term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Agr2 anterior gradient 2, protein disulphide isomerase family member ISO protein:increased expression:pancreas RGD PMID:19714807 RGD:2325658 NCBI chr 6:58,435,908...58,456,678
Ensembl chr 6:58,435,908...58,456,677
JBrowse link
G Akr7a2 aldo-keto reductase family 7, member A2 ISO protein:increased expression:pancreas RGD PMID:19077459 RGD:2325696 NCBI chr 5:156,835,589...156,844,127
Ensembl chr 5:156,835,551...156,844,109
JBrowse link
G Calr calreticulin ameliorates ISO human cells in mouse model
human cells in a mouse model
RGD PMID:33028359 PMID:29072694 RGD:150520160, RGD:150521706 NCBI chr19:40,213,367...40,218,262
Ensembl chr19:40,213,239...40,219,236
JBrowse link
G Ccnd1 cyclin D1 severity ISO DNA:snp:exon:c.870G>A (human)
protein:increased expression:pancreas (human)
RGD PMID:25470788 PMID:22939953 RGD:13462050, RGD:13462062 NCBI chr 1:209,518,288...209,527,986
Ensembl chr 1:209,518,288...209,527,810
JBrowse link
G Cd59b CD59b molecule disease_progression ISO protein:increased expression:blood (human) RGD PMID:32663515 RGD:151660329 NCBI chr 3:110,914,008...110,932,489
Ensembl chr 3:110,914,091...110,935,310
JBrowse link
G Cdk4 cyclin-dependent kinase 4 severity ISO protein:increased expression:pancreas, islet of Langerhans (human) RGD PMID:29735403 RGD:13781899 NCBI chr 7:64,771,453...64,774,891
Ensembl chr 7:64,771,147...64,775,163
JBrowse link
G E2f1 E2F transcription factor 1 severity ISO protein:increased expression:pancreatic ductal cell, nucleus (human)
DNA:amplification: : (human)
RGD PMID:12650514 PMID:17233815 PMID:27573434 RGD:13838735, RGD:13838739, RGD:13838738 NCBI chr 3:163,524,739...163,535,563
Ensembl chr 3:163,524,739...163,535,563
JBrowse link
G Foxm1 forkhead box M1 disease_progression ISO RGD PMID:24859161 RGD:156430321 NCBI chr 4:163,325,628...163,338,100
Ensembl chr 4:163,325,614...163,337,172
JBrowse link
G Fubp1 far upstream element binding protein 1 ISO mRNA:increased expression:pancreatic duct (human) RGD PMID:32481602 RGD:151361197 NCBI chr 2:243,819,529...243,846,544
Ensembl chr 2:243,819,218...243,846,428
JBrowse link
G Glipr2 GLI pathogenesis-related 2 disease_progression ISO protein:decreased expression:blood (human) RGD PMID:32663515 RGD:151660329 NCBI chr 5:62,966,163...62,998,016
Ensembl chr 5:62,966,195...62,998,716
JBrowse link
G Got1 glutamic-oxaloacetic transaminase 1 treatment ISO human cells in a mouse model RGD PMID:23535601 RGD:13504844 NCBI chr 1:252,306,541...252,337,622
Ensembl chr 1:252,284,434...252,329,871
JBrowse link
G Hspa8 heat shock protein family A (Hsp70) member 8 disease_progression ISO protein:decreased expression:blood (human) RGD PMID:32663515 RGD:151660329 NCBI chr 8:50,080,514...50,084,376
Ensembl chr 8:50,080,199...50,084,372
JBrowse link
G Ikbkb inhibitor of nuclear factor kappa B kinase subunit beta susceptibility ISO RGD PMID:22264792 RGD:13838741 NCBI chr16:76,021,968...76,075,717
Ensembl chr16:76,022,008...76,081,911
JBrowse link
G Jak1 Janus kinase 1 ISO mRNA:decreased expression:pancreatic ductal cell (human) RGD PMID:28677798 RGD:13838745 NCBI chr 5:120,895,606...121,004,207
Ensembl chr 5:120,896,046...120,996,758
JBrowse link
G Mapk8 mitogen-activated protein kinase 8 severity
disease_progression
ISO protein:increased phosphorylation:pancreas (mouse) RGD PMID:28837246 PMID:23237571 RGD:14348974, RGD:14348975 NCBI chr16:8,645,171...8,728,225
Ensembl chr16:8,645,198...8,728,427
JBrowse link
G Mir155 microRNA 155 disease_progression ISO RGD PMID:28198398 RGD:25314300 NCBI chr11:37,261,114...37,261,178
Ensembl chr11:37,261,114...37,261,178
JBrowse link
G Mir494 microRNA 494 disease_progression
ameliorates
ISO RGD PMID:24859161 PMID:24859161 RGD:156430321, RGD:156430321 NCBI chr 6:134,550,115...134,550,197
Ensembl chr 6:134,550,114...134,550,198
JBrowse link
G Pgf placental growth factor severity ISO associated with obesity RGD PMID:26861455 RGD:14349030 NCBI chr 6:110,547,165...110,557,747
Ensembl chr 6:110,547,153...110,557,747
JBrowse link
G Pik3cg phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit gamma ISO mRNA, protein:increased expression:pancreas (human) RGD PMID:20876794 RGD:14390130 NCBI chr 6:54,494,247...54,529,563
Ensembl chr 6:54,478,603...54,529,509
JBrowse link
G Pik3r2 phosphoinositide-3-kinase regulatory subunit 2 severity ISO human cells in a mouse model RGD PMID:15591514 RGD:14390084 NCBI chr16:18,699,389...18,708,045
Ensembl chr16:18,699,448...18,709,665
JBrowse link
G Pld1 phospholipase D1 severity ISO protein:increased expression:pancreas (human) RGD PMID:27713167 RGD:14392801 NCBI chr 2:112,777,820...112,975,857
Ensembl chr 2:112,777,951...112,976,245
JBrowse link
G Ptprb protein tyrosine phosphatase, receptor type, B disease_progression ISO protein:decreased expression:blood (human) RGD PMID:32663515 RGD:151660329 NCBI chr 7:53,816,197...53,920,760
Ensembl chr 7:53,816,097...53,920,760
JBrowse link
G Ptprm protein tyrosine phosphatase, receptor type, M disease_progression ISO protein:decreased expression:blood (human) RGD PMID:32663515 RGD:151660329 NCBI chr 9:114,086,380...114,791,000
Ensembl chr 9:114,086,380...114,790,477
JBrowse link
G Rac1 Rac family small GTPase 1 ISO mRNA:increased expression:pancreas (human)
mRNA, protein:increased expression:pancreas (mouse)
RGD PMID:23334332 PMID:21684285 RGD:14392806, RGD:14392816 NCBI chr12:16,150,411...16,170,864
Ensembl chr12:16,128,649...16,172,109
JBrowse link
G Rala RAS like proto-oncogene A ISO mRNA:increased expression:pancreas (human) RGD PMID:29113235 RGD:14394418 NCBI chr17:51,787,682...51,840,738
Ensembl chr17:51,787,699...51,840,733
JBrowse link
G S100a8 S100 calcium binding protein A8 disease_progression ISO protein:increased expression:blood (human) RGD PMID:32663515 RGD:151660329 NCBI chr 2:178,464,095...178,465,223
Ensembl chr 2:178,464,702...178,465,221
JBrowse link
G Smad2 SMAD family member 2 severity ISO RGD PMID:26908446 RGD:14394493 NCBI chr18:72,124,792...72,193,345
Ensembl chr18:72,124,863...72,187,388
JBrowse link
G Tgfb1 transforming growth factor, beta 1 ameliorates ISO protein:decreased expression:pancreas (human) RGD PMID:8253361 RGD:155630628 NCBI chr 1:90,324,312...90,340,627
Ensembl chr 1:90,324,046...90,340,899
JBrowse link
G Tgfb2 transforming growth factor, beta 2 ameliorates ISO protein:decreased expression:pancreas (human) RGD PMID:8253361 RGD:155630628 NCBI chr13:100,691,540...100,793,227
Ensembl chr13:100,692,953...100,792,856
JBrowse link
G Tgfb3 transforming growth factor, beta 3 ameliorates ISO protein:decreased expression:pancreas (human) RGD PMID:8253361 RGD:155630628 NCBI chr 6:111,435,170...111,457,646
Ensembl chr 6:111,435,170...111,456,946
JBrowse link
G Tgfbr1 transforming growth factor, beta receptor 1 ameliorates ISO human cell line in a mouse model RGD PMID:17297450 RGD:155630637 NCBI chr 5:66,449,348...66,506,371
Ensembl chr 5:66,449,293...66,527,260
JBrowse link
G Vegfd vascular endothelial growth factor D ISO protein:increased expression:blood serum (human) RGD PMID:21410412 RGD:155630646 NCBI chr  X:33,704,582...33,740,305
Ensembl chr  X:33,706,055...33,740,167
JBrowse link
G Vnn1 vanin 1 disease_progression ISO protein:increased expression:blood (human) RGD PMID:32663515 RGD:151660329 NCBI chr 1:23,356,324...23,366,629
Ensembl chr 1:23,356,330...23,366,629
JBrowse link
pancreatic ductal carcinoma term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ace angiotensin I converting enzyme ISO mRNA, protein:increased expression:pancreas RGD PMID:17481528 RGD:2325211 NCBI chr10:91,410,129...91,430,246
Ensembl chr10:91,409,819...91,430,942
JBrowse link
G Ace2 angiotensin converting enzyme 2 ISO protein:decreased expression:pancreas RGD PMID:19212105 RGD:2325210 NCBI chr  X:33,925,458...33,972,851
Ensembl chr  X:33,925,458...33,971,596
JBrowse link
G Adam8 ADAM metallopeptidase domain 8 disease_progression ISO mRNA:increased expression:pancreas RGD PMID:17979891 RGD:2325243 NCBI chr 1:204,206,206...204,218,988
Ensembl chr 1:204,206,199...204,218,485
JBrowse link
G Adam9 ADAM metallopeptidase domain 9 disease_progression ISO protein:altered localization:cytoplasm RGD PMID:14997207 RGD:2325249 NCBI chr16:73,725,186...73,804,284
Ensembl chr16:73,725,114...73,804,646
JBrowse link
G Agr2 anterior gradient 2, protein disulphide isomerase family member ISO mRNA:increased expression:pancreas RGD PMID:19609859 RGD:2325659 NCBI chr 6:58,435,908...58,456,678
Ensembl chr 6:58,435,908...58,456,677
JBrowse link
G Agtr1a angiotensin II receptor, type 1a ISO CTD Direct Evidence: marker/mechanism CTD PMID:17481528 NCBI chr17:34,383,397...34,435,523
Ensembl chr17:34,381,467...34,435,660
JBrowse link
G Alb albumin disease_progression ISO RGD PMID:19011933 RGD:2325677 NCBI chr14:17,891,564...17,907,043
Ensembl chr14:17,891,582...17,911,865
JBrowse link
G Anxa2 annexin A2 disease_progression ISO mRNA, protein:increased expression, altered localization:pancreas, plasma membrane RGD PMID:19260470 PMID:16450333 RGD:2317307, RGD:2325731 NCBI chr 8:78,986,252...79,022,638
Ensembl chr 8:78,986,242...79,022,631
JBrowse link
G Anxa5 annexin A5 ISO protein:increased expression:pancreas RGD PMID:19488907 RGD:2317538 NCBI chr 2:121,242,133...121,272,935
Ensembl chr 2:121,242,136...121,281,400
JBrowse link
G Anxa8 annexin A8 ISO mRNA:increased expression:pancreas RGD PMID:18223320 RGD:2325735 NCBI chr16:9,397,144...9,412,072
Ensembl chr16:9,403,353...9,418,310
JBrowse link
G Apoc1 apolipoprotein C1 ISO RGD PMID:15876873 RGD:2325793 NCBI chr 1:79,347,057...79,350,340
Ensembl chr 1:88,474,663...88,478,155
JBrowse link
G Arg2 arginase 2 ISO CTD Direct Evidence: marker/mechanism CTD PMID:23424623 NCBI chr 6:103,669,001...103,694,375
Ensembl chr 6:103,668,988...103,694,375
JBrowse link
G Bmi1 BMI1 proto-oncogene, polycomb ring finger ISO protein:increased expression:pancreas
protein:increased expression:exocrine pancreas:
RGD PMID:19585519 PMID:19585519 RGD:9491843, RGD:9491843 NCBI chr17:86,240,683...86,250,044
Ensembl chr17:86,243,491...86,250,024
JBrowse link
G C1h19orf33 similar to human chromosome 19 open reading frame 33 ISO CTD Direct Evidence: marker/mechanism CTD PMID:35142956 NCBI chr 1:84,549,830...84,550,666
Ensembl chr 1:93,677,305...93,678,141
JBrowse link
G Calr calreticulin ISO protein:increased expression:pancreatic duct RGD PMID:15289361 RGD:2326165 NCBI chr19:40,213,367...40,218,262
Ensembl chr19:40,213,239...40,219,236
JBrowse link
G Cbx7 chromobox 7 disease_progression ISO protein:decreased expression:pancreas RGD PMID:20185297 RGD:9587360 NCBI chr 7:113,341,030...113,358,716
Ensembl chr 7:113,341,030...113,358,346
JBrowse link
G Cckar cholecystokinin A receptor ISO mRNA:increased expression:pancreatic duct
protein:decreased expression:pancreas
RGD PMID:9239407 PMID:12851875 RGD:4110818, RGD:4110816 NCBI chr14:61,505,270...61,513,618
Ensembl chr14:61,505,270...61,513,618
JBrowse link
G Cckbr cholecystokinin B receptor ISO protein:decreased expression:pancreas RGD PMID:12851875 RGD:4110816 NCBI chr 1:159,771,733...159,781,738
Ensembl chr 1:169,183,194...169,193,745
JBrowse link
G Ccnd1 cyclin D1 severity ISO protein:increased expression:pancreas (human) RGD PMID:17420962 RGD:13462063 NCBI chr 1:209,518,288...209,527,986
Ensembl chr 1:209,518,288...209,527,810
JBrowse link
G Cd40 CD40 molecule treatment ISO protein:increased expression:dendritic cell RGD PMID:21436454 PMID:23983255 PMID:20976171 RGD:5490301, RGD:11522743, RGD:5490524 NCBI chr 3:174,209,113...174,224,592
Ensembl chr 3:174,209,719...174,224,847
JBrowse link
G Cdk6 cyclin-dependent kinase 6 treatment ISO human cells in a mouse model RGD PMID:24389175 RGD:13782187 NCBI chr 4:31,592,384...31,784,732
Ensembl chr 4:31,601,192...31,781,701
JBrowse link
G Cdkn1a cyclin-dependent kinase inhibitor 1A disease_progression ISO RGD PMID:17671118 RGD:8662851 NCBI chr20:7,150,820...7,161,373
Ensembl chr20:7,153,958...7,164,969
JBrowse link
G Cdkn2a cyclin-dependent kinase inhibitor 2A ISO CTD Direct Evidence: marker/mechanism CTD PMID:24986516 NCBI chr 5:109,100,763...109,114,448
Ensembl chr 5:109,100,772...109,119,248
JBrowse link
G Cldn4 claudin 4 ISO RGD PMID:15693851 RGD:2317592 NCBI chr12:27,388,160...27,389,958
Ensembl chr12:27,387,981...27,389,958
JBrowse link
G Cxcl11 C-X-C motif chemokine ligand 11 ISO CTD Direct Evidence: marker/mechanism CTD PMID:24979617 NCBI chr14:15,973,728...15,976,503
Ensembl chr14:15,973,720...15,976,567
JBrowse link
G Dnmt1 DNA methyltransferase 1 disease_progression ISO protein:increased expression:pancreas
CTD Direct Evidence: marker/mechanism
CTD
RGD
PMID:29844410 PMID:19424621 RGD:9588974 NCBI chr 8:27,716,797...27,763,405
Ensembl chr 8:27,716,797...27,763,119
JBrowse link
G Dnmt3b DNA methyltransferase 3 beta disease_progression ISO RGD PMID:22919364 RGD:9589121 NCBI chr 3:162,590,777...162,629,313
Ensembl chr 3:162,604,037...162,629,313
JBrowse link
G Dtx1 deltex E3 ubiquitin ligase 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:19208345 NCBI chr12:35,849,647...35,880,835
Ensembl chr12:41,510,264...41,541,430
JBrowse link
G Dtx4 deltex E3 ubiquitin ligase 4 ISO CTD Direct Evidence: marker/mechanism CTD PMID:19208345 NCBI chr 1:218,882,391...218,969,837
Ensembl chr 1:218,832,284...218,917,130
JBrowse link
G Egf epidermal growth factor disease_progression ISO protein:increased expression: : RGD PMID:18505086 RGD:2317644 NCBI chr 2:220,893,660...220,976,331
Ensembl chr 2:220,893,660...220,976,297
JBrowse link
G Faslg Fas ligand ISO protein:increased expression:pancreas, liver RGD PMID:10547193 PMID:15375495 RGD:2317747, RGD:2317741 NCBI chr13:76,680,885...76,706,042
Ensembl chr13:76,688,243...76,695,503
JBrowse link
G Fgf2 fibroblast growth factor 2 disease_progression ISO RGD PMID:12717266 PMID:18704599 RGD:2317758, RGD:2317756 NCBI chr 2:122,164,454...122,218,796
Ensembl chr 2:122,164,454...122,224,493
JBrowse link
G Fscn1 fascin actin-bundling protein 1 disease_progression ISO protein:increased expression:pancreas RGD PMID:12109856 RGD:2317790 NCBI chr12:16,710,601...16,723,734
Ensembl chr12:16,710,601...16,723,734
JBrowse link
G Gpnmb glycoprotein nmb ISO CTD Direct Evidence: marker/mechanism CTD PMID:24979617 NCBI chr 4:79,341,128...79,362,366
Ensembl chr 4:79,341,021...79,380,240
JBrowse link
G Gstp1 glutathione S-transferase pi 1 resistance ISO DNA:methylation: :
mRNA, protein:increased expression:pancreas
RGD PMID:16537562 PMID:17265526 PMID:12488200 RGD:2317809, RGD:2317806, RGD:2317811 NCBI chr 1:210,767,237...210,770,242
Ensembl chr 1:210,767,237...210,769,705
JBrowse link
G Hdac1 histone deacetylase 1 disease_progression ISO protein:increased expression:pancreas RGD PMID:19424621 RGD:9588974 NCBI chr 5:147,138,328...147,165,387
Ensembl chr 5:147,138,156...147,165,387
JBrowse link
G Heatr1 HEAT repeat containing 1 treatment ISO RGD PMID:26676747 RGD:10761108 NCBI chr17:62,745,008...62,785,609
Ensembl chr17:62,745,008...62,785,186
JBrowse link
G Hes1 hes family bHLH transcription factor 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:19208345 NCBI chr11:84,210,632...84,213,045
Ensembl chr11:84,210,633...84,213,061
JBrowse link
G Hey1 hes-related family bHLH transcription factor with YRPW motif 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:19208345 NCBI chr 2:95,003,935...95,006,457
Ensembl chr 2:95,002,943...95,007,624
JBrowse link
G Hey2 hes-related family bHLH transcription factor with YRPW motif 2 ISO CTD Direct Evidence: marker/mechanism CTD PMID:19208345 NCBI chr 1:28,641,100...28,651,187
Ensembl chr 1:28,641,057...28,651,187
JBrowse link
G Hspa1a heat shock protein family A (Hsp70) member 1A ISO CTD Direct Evidence: marker/mechanism CTD PMID:17234771 NCBI chr20:3,875,411...3,877,866
Ensembl chr20:3,855,780...3,877,979
JBrowse link
G Hspa1b heat shock protein family A (Hsp70) member 1B ISO CTD Direct Evidence: marker/mechanism CTD PMID:17234771 NCBI chr20:3,859,756...3,863,800
Ensembl chr20:3,855,780...3,877,979
JBrowse link
G Igf1 insulin-like growth factor 1 ISO RGD PMID:20098680 RGD:2317639 NCBI chr 7:24,169,608...24,249,446
Ensembl chr 7:24,130,137...24,246,764
JBrowse link
G Igf1r insulin-like growth factor 1 receptor ISO protein:increased expression:pancreas RGD PMID:14627343 PMID:14506643 RGD:2317649, RGD:2317652 NCBI chr 1:130,959,787...131,248,664
Ensembl chr 1:130,959,997...131,248,664
JBrowse link
G Il4 interleukin 4 ISO RGD PMID:17942922 RGD:2317264 NCBI chr10:38,272,003...38,277,549
Ensembl chr10:38,272,003...38,277,549
JBrowse link
G Il4r interleukin 4 receptor ISO protein:increased expression:pancreas RGD PMID:17942922 RGD:2317264 NCBI chr 1:189,545,739...189,570,639
Ensembl chr 1:189,544,988...189,570,636
JBrowse link
G Ins2 insulin 2 ISO Glucagon/insulin RGD PMID:19571666 RGD:2317248 NCBI chr 1:207,272,738...207,421,998
Ensembl chr 1:207,272,742...207,273,805
JBrowse link
G Jag1 jagged canonical Notch ligand 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:19208345 NCBI chr 3:144,859,453...144,894,883
Ensembl chr 3:144,859,453...144,894,872
JBrowse link
G Jag2 jagged canonical Notch ligand 2 ISO CTD Direct Evidence: marker/mechanism CTD PMID:19208345 NCBI chr 6:137,804,133...137,826,738
Ensembl chr 6:137,804,133...137,826,738
JBrowse link
G Kdm2b lysine demethylase 2B severity ISO mRNA, protein:increased expression:pancreas (human) RGD PMID:23321669 RGD:9588253 NCBI chr12:39,224,422...39,362,126
Ensembl chr12:39,235,301...39,362,127
JBrowse link
G Kitlg KIT ligand ISO CTD Direct Evidence: marker/mechanism CTD PMID:24979617 NCBI chr 7:36,782,621...36,863,796
Ensembl chr 7:36,782,638...36,863,793
JBrowse link
G Kras KRAS proto-oncogene, GTPase ISO CTD Direct Evidence: marker/mechanism CTD PMID:25347530 PMID:30654191 NCBI chr 4:179,916,255...179,949,613
Ensembl chr 4:179,919,802...179,949,320
JBrowse link
G Krt7 keratin 7 disease_progression ISO RGD PMID:19260470 RGD:2317307 NCBI chr 7:132,528,881...132,545,052
Ensembl chr 7:134,407,584...134,423,786
JBrowse link
G L1cam L1 cell adhesion molecule severity ISO protein:increased expression:pancreas (human) RGD PMID:20162456 RGD:6483447 NCBI chr  X:156,748,597...156,775,116
Ensembl chr  X:156,748,597...156,775,077
JBrowse link
G Map3k7 mitogen activated protein kinase kinase kinase 7 ISO CTD Direct Evidence: marker/mechanism CTD PMID:34686948 NCBI chr 5:51,149,524...51,212,012
Ensembl chr 5:51,154,352...51,212,012
JBrowse link
G Mapk3 mitogen activated protein kinase 3 treatment ISO human cells in mouse model RGD PMID:20179210 RGD:14348973 NCBI chr 1:190,797,189...190,803,411
Ensembl chr 1:190,797,185...190,803,411
JBrowse link
G Mcm7 minichromosome maintenance complex component 7 ISO mRNA, protein:increased expression:pancreatic duct RGD PMID:15548371 RGD:2317697 NCBI chr12:22,155,921...22,163,320
Ensembl chr12:22,155,921...22,163,771
JBrowse link
G Mdm2 MDM2 proto-oncogene onset
severity
ISO DNA:snp:promoter, intron:IVS1+309T>G (human)
protein:increased expression:pancreas (human)
RGD PMID:19752772 PMID:15810085 RGD:2317414, RGD:2317416 NCBI chr 7:55,176,558...55,201,757
Ensembl chr 7:55,176,560...55,200,791
JBrowse link
G Men1 menin 1 ISO protein:decreased expression:pancreas RGD PMID:19170121 RGD:2317294 NCBI chr 1:213,068,166...213,074,132
Ensembl chr 1:213,068,166...213,074,120
JBrowse link
G Met MET proto-oncogene, receptor tyrosine kinase ISO protein:increased expression:pancreatic duct (human) RGD PMID:7866999 RGD:2317530 NCBI chr 4:46,756,823...46,864,041
Ensembl chr 4:46,756,506...46,870,821
JBrowse link
G Mgmt O-6-methylguanine-DNA methyltransferase susceptibility ISO DNA:missense mutation:cds:p.L84F rs12917 (human)
protein:increased activity, increased expression:ductal adenocarcinoma (human)
RGD PMID:16844323 PMID:9393761 RGD:2317648, RGD:2317664 NCBI chr 1:201,140,832...201,367,481
Ensembl chr 1:201,140,661...201,367,482
JBrowse link
G Mir142 microRNA 142 ISO CTD Direct Evidence: marker/mechanism CTD PMID:29844410 NCBI chr10:73,055,104...73,055,190
Ensembl chr10:73,055,097...73,055,207
JBrowse link
G Mir873 microRNA 873 ISO CTD Direct Evidence: therapeutic CTD PMID:30654191 NCBI chr 5:56,153,104...56,153,180 JBrowse link
G Mmp2 matrix metallopeptidase 2 severity ISO protein:increased expression:pancreas RGD PMID:17377415 RGD:2325746 NCBI chr19:30,327,643...30,355,856
Ensembl chr19:30,327,643...30,355,856
JBrowse link
G Mmp9 matrix metallopeptidase 9 ISO protein:increased expression:pancreas, serum
protein:increased expression:blood
RGD PMID:18706098 PMID:20332475 RGD:2325844, RGD:2325830 NCBI chr 3:174,103,474...174,111,434
Ensembl chr 3:174,084,123...174,111,442
JBrowse link
G Msln mesothelin disease_progression ISO protein:increased secretion:serum
CTD Direct Evidence: marker/mechanism
DNA:hypomethylation:5'UTR
CTD
RGD
PMID:14576474 PMID:21775916 PMID:25347530 PMID:19818733 PMID:12874021 RGD:2326055, RGD:2326065 NCBI chr10:15,276,489...15,285,921
Ensembl chr10:15,275,659...15,282,153
JBrowse link
G Muc1 mucin 1, cell surface associated disease_progression ISO protein:increased expression, altered localization:pancreas RGD PMID:14681945 PMID:19109152 PMID:18713982 RGD:2317983, RGD:2324616, RGD:2324633 NCBI chr 2:176,933,312...176,938,497
Ensembl chr 2:176,933,047...176,938,491
JBrowse link
G Muc17 mucin 17, cell surface associated disease_progression ISO mRNA:increased expression:pancreas RGD PMID:12657964 RGD:2324946 NCBI chr12:25,139,076...25,175,249 JBrowse link
G Muc3a mucin 3A, cell surface associated disease_progression ISO mRNA:increased expression:pancreas RGD PMID:12657964 RGD:2324946 NCBI chr12:19,450,679...19,454,753
Ensembl chr12:25,082,837...25,097,265
JBrowse link
G Muc4 mucin 4, cell surface associated disease_progression ISO mRNA:increased expression:pancreas
protein:increased expression:pancreas
RGD PMID:12657964 PMID:16049287 RGD:2324946, RGD:2324942 NCBI chr11:81,513,321...81,575,200 JBrowse link
G Muc5ac mucin 5AC, oligomeric mucus/gel-forming disease_progression ISO mRNA:increased expression:pancreas RGD PMID:7657125 PMID:10227724 RGD:2324986, RGD:2324907 NCBI chr 1:206,293,717...206,326,006
Ensembl chr 1:206,293,869...206,326,006
JBrowse link
G Muc5b mucin 5B, oligomeric mucus/gel-forming ISO mRNA:increased expression:pancreas RGD PMID:7657125 RGD:2324986 NCBI chr 1:206,346,400...206,378,367
Ensembl chr 1:206,346,400...206,378,367
JBrowse link
G Ndrg1 N-myc downstream regulated 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:16778198 NCBI chr 7:100,573,526...100,614,902
Ensembl chr 7:100,573,523...100,614,913
JBrowse link
G Nfe2l2 NFE2 like bZIP transcription factor 2 ISO CTD Direct Evidence: marker/mechanism CTD PMID:21489257 NCBI chr 3:81,001,529...81,031,165
Ensembl chr 3:81,001,529...81,029,090
JBrowse link
G Nme1 NME/NM23 nucleoside diphosphate kinase 1 ISO protein:increased expression:pancreas (human) RGD PMID:17492507 RGD:5132867 NCBI chr10:79,403,939...79,426,620
Ensembl chr10:79,403,940...79,413,310
JBrowse link
G Nos2 nitric oxide synthase 2 ISO RGD PMID:12660813 RGD:2325254 NCBI chr10:64,313,335...64,349,221
Ensembl chr10:64,313,335...64,401,880
JBrowse link
G Notch1 notch receptor 1 ISO CTD Direct Evidence: marker/mechanism CTD
RGD
PMID:19208345 PMID:20484026 PMID:19028876 RGD:2325323, RGD:2325324 NCBI chr 3:29,676,040...29,721,613
Ensembl chr 3:29,676,171...29,721,613
JBrowse link
G Notch3 notch receptor 3 ISO CTD Direct Evidence: marker/mechanism CTD PMID:19208345 NCBI chr 7:11,783,550...11,834,585
Ensembl chr 7:11,784,272...11,834,778
JBrowse link
G Notch4 notch receptor 4 ISO CTD Direct Evidence: marker/mechanism CTD PMID:19208345 NCBI chr20:4,160,362...4,184,466
Ensembl chr20:4,161,730...4,189,072
JBrowse link
G Ntrk3 neurotrophic receptor tyrosine kinase 3 disease_progression ISO protein:increased expression:pancreas RGD PMID:11295066 PMID:10209957 RGD:2325660, RGD:2325663 NCBI chr 1:141,526,192...141,913,575
Ensembl chr 1:141,542,569...141,913,004
JBrowse link
G Osm oncostatin M ISO CTD Direct Evidence: marker/mechanism CTD PMID:24979617 NCBI chr14:83,327,202...83,332,073
Ensembl chr14:83,327,554...83,331,827
JBrowse link
G Palld palladin, cytoskeletal associated protein ISO protein:increased expression, alternative form:pancreas, fibroblast RGD PMID:17404500 RGD:2325781 NCBI chr16:33,238,943...33,632,236
Ensembl chr16:33,238,956...33,632,232
JBrowse link
G Pax6 paired box 6 ISO protein:increased expression:pancreatic duct (human) RGD PMID:17849422 RGD:8552381 NCBI chr 3:112,590,034...112,611,771
Ensembl chr 3:112,590,391...112,611,763
JBrowse link
G Pms1 PMS1 homolog 1, mismatch repair system component ISO protein:increased expression:pancreatic duct RGD PMID:15856462 RGD:2324870 NCBI chr 9:55,721,393...55,832,225
Ensembl chr 9:55,745,374...55,832,221
JBrowse link
G Pparg peroxisome proliferator-activated receptor gamma disease_progression ISO RGD PMID:19396032 RGD:2317461 NCBI chr 4:150,095,743...150,221,104
Ensembl chr 4:150,095,787...150,221,104
JBrowse link
G Ptgs2 prostaglandin-endoperoxide synthase 2 ISO RGD PMID:18670639 RGD:2317185 NCBI chr13:64,714,063...64,722,320
Ensembl chr13:64,713,619...64,722,320
JBrowse link
G Rela RELA proto-oncogene, NF-kB subunit ISO CTD Direct Evidence: marker/mechanism CTD PMID:34686948 NCBI chr 1:212,354,336...212,364,815
Ensembl chr 1:212,333,035...212,364,817
JBrowse link
G Rnf2 ring finger protein 2 ISO protein:increased expression:pancreas RGD PMID:19585519 RGD:9491843 NCBI chr13:66,103,943...66,136,038
Ensembl chr13:66,083,653...66,133,161
JBrowse link
G Rxra retinoid X receptor alpha severity ISO RGD PMID:19396032 RGD:2317461 NCBI chr 3:31,387,892...31,474,415
Ensembl chr 3:31,388,223...31,474,417
JBrowse link
G Serpina1 serpin family A member 1 ISO mRNA, protein:increased expression:pancreas RGD PMID:12488200 RGD:2317811 NCBI chr 6:128,631,101...128,653,125
Ensembl chr 6:128,619,382...128,660,703
JBrowse link
G Slc2a2 solute carrier family 2 member 2 ISO protein:increased expression:pancreatic duct RGD PMID:19252908 RGD:2324975 NCBI chr 2:113,537,884...113,568,422
Ensembl chr 2:113,537,972...113,568,467
JBrowse link
G Smad4 SMAD family member 4 disease_progression ISO RGD PMID:15173084 RGD:21066334 NCBI chr18:69,518,988...69,549,684
Ensembl chr18:69,518,988...69,549,684
JBrowse link
G Smo smoothened, frizzled class receptor ISO RGD PMID:16826192 RGD:2324981 NCBI chr 4:59,311,084...59,341,280
Ensembl chr 4:59,311,041...59,341,281
JBrowse link
G Stk11 serine/threonine kinase 11 ISO CTD Direct Evidence: marker/mechanism CTD PMID:26887594 NCBI chr 7:10,225,204...10,241,965
Ensembl chr 7:10,225,204...10,241,965
JBrowse link
G Tgfb1 transforming growth factor, beta 1 disease_progression ISO RGD PMID:16101174 RGD:2325019 NCBI chr 1:90,324,312...90,340,627
Ensembl chr 1:90,324,046...90,340,899
JBrowse link
G Tgfbr2 transforming growth factor, beta receptor 2 disease_progression ISO mRNA:increased expresssion:pancreas RGD PMID:17114585 PMID:10547197 RGD:2317498, RGD:2317500 NCBI chr 8:124,672,677...124,761,741
Ensembl chr 8:124,674,986...124,761,469
JBrowse link
G Thbs1 thrombospondin 1 disease_progression ISO DNA:hypermethylation:promoter (human) RGD PMID:12429967 PMID:19065635 RGD:2325025, RGD:2325022 NCBI chr 3:125,510,250...125,525,402
Ensembl chr 3:125,510,250...125,525,402
JBrowse link
G Tmprss3 transmembrane serine protease 3 ISO RGD PMID:14695172 RGD:2325152 NCBI chr20:9,254,102...9,273,808
Ensembl chr20:9,255,467...9,275,720
JBrowse link
G Tp53 tumor protein p53 ISO CTD Direct Evidence: marker/mechanism CTD PMID:29844410 NCBI chr10:54,798,871...54,810,300
Ensembl chr10:54,798,851...54,810,299
JBrowse link
G Tsc2 TSC complex subunit 2 severity ISO RGD PMID:16213898 RGD:11568674 NCBI chr10:14,125,679...14,160,317
Ensembl chr10:14,125,680...14,160,600
JBrowse link
G Tymp thymidine phosphorylase disease_progression ISO RGD PMID:19760965 RGD:2325155 NCBI chr 7:122,318,396...122,323,716
Ensembl chr 7:122,316,520...122,324,003
JBrowse link
G Vegfa vascular endothelial growth factor A ISO CTD Direct Evidence: marker/mechanism CTD PMID:17481528 NCBI chr 9:22,452,854...22,468,194
Ensembl chr 9:22,439,392...22,468,194
JBrowse link
G Vhl von Hippel-Lindau tumor suppressor ISO DNA:hypermethylation:promoter (human) RGD PMID:19065635 RGD:2325022 NCBI chr 4:148,328,099...148,334,992
Ensembl chr 4:148,328,079...148,334,991
JBrowse link
G Yeats2 YEATS domain containing 2 ISO CTD Direct Evidence: marker/mechanism CTD PMID:34686948 NCBI chr11:94,247,538...94,333,652
Ensembl chr11:94,247,538...94,333,292
JBrowse link
G Zzz3 zinc finger, ZZ-type containing 3 ISO CTD Direct Evidence: marker/mechanism CTD PMID:34686948 NCBI chr 2:243,990,305...244,057,251
Ensembl chr 2:243,990,289...244,056,118
JBrowse link
pancreatic endocrine carcinoma term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Brca2 BRCA2, DNA repair associated ISO ClinVar Annotator: match by term: Neuroendocrine tumor of pancreas ClinVar PMID:15145354 PMID:22762150 PMID:25741868 PMID:29446198 NCBI chr12:4,895,092...4,939,340
Ensembl chr12:4,895,447...4,936,194
JBrowse link
G Cux1 cut-like homeobox 1 exacerbates ISO protein:increased expression:pancreas (human) RGD PMID:32707646 RGD:153297777 NCBI chr12:25,728,393...26,062,497
Ensembl chr12:25,743,733...26,062,497
JBrowse link
G Daxx death-domain associated protein disease_progression ISO DNA:frameshift, frameshift mutations, nonsense mutation, missense mutations:CDS:multiple (human) RGD PMID:29212165 RGD:152025205 NCBI chr20:4,971,973...4,978,062
Ensembl chr20:4,971,941...4,977,720
JBrowse link
G Mgmt O-6-methylguanine-DNA methyltransferase ISO DNA:hypermethylation:promoter (human) RGD PMID:14501508 RGD:2317661 NCBI chr 1:201,140,832...201,367,481
Ensembl chr 1:201,140,661...201,367,482
JBrowse link
G Palb2 partner and localizer of BRCA2 ISO ClinVar Annotator: match by term: Neuroendocrine tumor of pancreas ClinVar PMID:17200668 PMID:17200671 PMID:17200672 PMID:24136930 PMID:25099575 More... NCBI chr 1:186,096,312...186,120,284
Ensembl chr 1:186,096,312...186,120,302
JBrowse link
G Pgf placental growth factor disease_progression
treatment
ISO protein:increased expression:serum (human)
human cells in a mouse model
RGD PMID:23463017 PMID:26861455 RGD:14349029, RGD:14349030 NCBI chr 6:110,547,165...110,557,747
Ensembl chr 6:110,547,153...110,557,747
JBrowse link
Pancreatic Fistula term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Alb albumin spontaneous ISO associated with Postoperative Complications; RGD PMID:23225108 RGD:11035295 NCBI chr14:17,891,564...17,907,043
Ensembl chr14:17,891,582...17,911,865
JBrowse link
pancreatic hypoplasia-diabetes-congenital heart disease syndrome term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acadvl acyl-CoA dehydrogenase, very long chain ISO ClinVar Annotator: match by term: Pancreatic hypoplasia-diabetes-congenital heart disease syndrome ClinVar PMID:25741868 NCBI chr10:55,231,558...55,236,786
Ensembl chr10:55,231,440...55,236,750
JBrowse link
G Dlg4 discs large MAGUK scaffold protein 4 ISO ClinVar Annotator: match by term: Pancreatic hypoplasia-diabetes-congenital heart disease syndrome ClinVar PMID:25741868 NCBI chr10:55,239,397...55,267,780
Ensembl chr10:55,236,869...55,265,839
JBrowse link
G Gata6 GATA binding protein 6 ISO ClinVar Annotator: match by term: GATA6-related congenital heart disease with or without pancreatic agenesis or neonatal diabetes | ClinVar Annotator: match by term: HEART DEFECTS, CONGENITAL, AND OTHER CONGENITAL ANOMALIES | ClinVar Annotator: match by term: Pancreatic hypoplasia-diabetes-congenital heart disease syndrome OMIM
ClinVar
PMID:8071961 PMID:19666519 PMID:20581743 PMID:22158542 PMID:22962692 More... NCBI chr18:2,460,909...2,492,322
Ensembl chr18:2,458,253...2,492,322
JBrowse link
pancreatic intraductal papillary-mucinous neoplasm term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Akt1 AKT serine/threonine kinase 1 ISO DNA:missense mutation:cds:p.E17K (human) RGD PMID:24132918 RGD:13462042 NCBI chr 6:137,534,810...137,555,131
Ensembl chr 6:137,535,390...137,552,610
JBrowse link
G Tp53 tumor protein p53 ISO DNA:missense mutations: :multiple RGD PMID:28930868 RGD:14995501 NCBI chr10:54,798,871...54,810,300
Ensembl chr10:54,798,851...54,810,299
JBrowse link
G Vegfd vascular endothelial growth factor D ISO protein:increased expression:blood serum (human) RGD PMID:21410412 RGD:155630646 NCBI chr  X:33,704,582...33,740,305
Ensembl chr  X:33,706,055...33,740,167
JBrowse link
Pancreatic Intraepithelial Neoplasia term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Agr2 anterior gradient 2, protein disulphide isomerase family member ISO protein:increased expression:pancreas RGD PMID:19714807 RGD:2325658 NCBI chr 6:58,435,908...58,456,678
Ensembl chr 6:58,435,908...58,456,677
JBrowse link
G Bmi1 BMI1 proto-oncogene, polycomb ring finger ISO protein:increased expression:pancreatic acinar cell:
protein:increased expression:exocrine pancreas:
RGD PMID:19585519 PMID:19585519 RGD:9491843, RGD:9491843 NCBI chr17:86,240,683...86,250,044
Ensembl chr17:86,243,491...86,250,024
JBrowse link
G Cbx7 chromobox 7 disease_progression ISO protein:decreased expression:pancreas RGD PMID:20185297 RGD:9587360 NCBI chr 7:113,341,030...113,358,716
Ensembl chr 7:113,341,030...113,358,346
JBrowse link
G Ccnd1 cyclin D1 disease_progression ISO protein:increased expression:pancreas (human) RGD PMID:12882690 PMID:11751405 RGD:13462061, RGD:13464129 NCBI chr 1:209,518,288...209,527,986
Ensembl chr 1:209,518,288...209,527,810
JBrowse link
G Dnmt1 DNA methyltransferase 1 ISO protein:increased expression:pancreas RGD PMID:19424621 RGD:9588974 NCBI chr 8:27,716,797...27,763,405
Ensembl chr 8:27,716,797...27,763,119
JBrowse link
G Hdac1 histone deacetylase 1 ISO protein:increased expression:pancreas RGD PMID:19424621 RGD:9588974 NCBI chr 5:147,138,328...147,165,387
Ensembl chr 5:147,138,156...147,165,387
JBrowse link
G Ikbkb inhibitor of nuclear factor kappa B kinase subunit beta severity
disease_progression
ISO RGD PMID:22406536 PMID:22056382 RGD:13838740, RGD:13838742 NCBI chr16:76,021,968...76,075,717
Ensembl chr16:76,022,008...76,081,911
JBrowse link
Pancreatic Lipase Deficiency term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pnlip pancreatic lipase ISO ClinVar Annotator: match by term: PNLIP-related condition OMIM
ClinVar
PMID:9536098 PMID:17576681 PMID:28492532 NCBI chr 1:267,760,073...267,797,797
Ensembl chr 1:267,784,724...267,797,795
JBrowse link
pancreatic mucinous cystadenoma term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Kras KRAS proto-oncogene, GTPase severity ISO DNA:mutations:cds: RGD PMID:28570009 RGD:14398747 NCBI chr 4:179,916,255...179,949,613
Ensembl chr 4:179,919,802...179,949,320
JBrowse link
pancreatic solid pseudopapillary carcinoma term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ccnd1 cyclin D1 severity ISO protein:increased expression:pancreas (human) RGD PMID:19248223 RGD:13462054 NCBI chr 1:209,518,288...209,527,986
Ensembl chr 1:209,518,288...209,527,810
JBrowse link
pancreatitis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Alb albumin ISO CTD Direct Evidence: marker/mechanism CTD PMID:17169977 NCBI chr14:17,891,564...17,907,043
Ensembl chr14:17,891,582...17,911,865
JBrowse link
G Bdkrb2 bradykinin receptor B2 IMP RGD PMID:7791078 RGD:4891025 NCBI chr 6:130,237,055...130,267,205
Ensembl chr 6:130,237,255...130,267,209
JBrowse link
G Bnip3l BCL2 interacting protein 3 like IEP mRNA, protein:increased expression:lung RGD PMID:14530762 RGD:7483579 NCBI chr15:45,350,081...45,373,213
Ensembl chr15:45,334,537...45,373,282
JBrowse link
G Camp cathelicidin antimicrobial peptide IEP protein:decreased expression:pancreatic islet RGD PMID:26370175 RGD:441221244 NCBI chr 8:118,720,184...118,721,998
Ensembl chr 8:118,720,184...118,721,998
JBrowse link
G Casp12 caspase 12 IEP RGD PMID:16574987 RGD:2311467 NCBI chr 8:10,927,188...10,954,442
Ensembl chr 8:10,926,994...10,954,442
JBrowse link
G Casp3 caspase 3 IEP RGD PMID:16574987 RGD:2311467 NCBI chr16:52,395,539...52,413,794
Ensembl chr16:52,395,540...52,413,732
JBrowse link
G Cck cholecystokinin ISO CTD Direct Evidence: marker/mechanism CTD PMID:16187300 PMID:16499907 NCBI chr 8:130,031,012...130,037,702
Ensembl chr 8:130,031,013...130,037,686
JBrowse link
G Ccl2 C-C motif chemokine ligand 2 IEP
ISO
IMP
human gene in rat model RGD PMID:19111613 PMID:16284287 PMID:18297440 RGD:2307002, RGD:8549548, RGD:2307046 NCBI chr10:67,503,077...67,504,875
Ensembl chr10:67,503,077...67,504,875
JBrowse link
G Ccl5 C-C motif chemokine ligand 5 ISO
IEP
associated with Pancreatic Neoplasms;DNA:polymorphism: :-403G>A (human)
protein:increased expression:pancreas (rat)
RGD PMID:16614115 PMID:16843865 RGD:2317568, RGD:2307146 NCBI chr10:68,820,330...68,824,906
Ensembl chr10:68,738,651...68,824,884
JBrowse link
G Cd14 CD14 molecule ISO RGD PMID:19201771 RGD:4144143 NCBI chr18:28,609,558...28,611,409
Ensembl chr18:28,608,883...28,611,292
JBrowse link
G Cftr CF transmembrane conductance regulator ISO CTD Direct Evidence: marker/mechanism
ClinVar Annotator: match by term: Pancreatitis | ClinVar Annotator: match by term: Recurrent pancreatitis
CTD
ClinVar
PMID:1370875 PMID:1377276 PMID:1379210 PMID:1379413 PMID:1380673 More... NCBI chr 4:47,422,084...47,694,646
Ensembl chr 4:47,526,735...47,694,643
JBrowse link
G Cldn2 claudin 2 ISO CTD Direct Evidence: marker/mechanism CTD PMID:23143602 NCBI chr  X:108,248,383...108,258,847
Ensembl chr  X:108,237,676...108,262,377
JBrowse link
G Cnr1 cannabinoid receptor 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:17484889 NCBI chr 5:53,204,867...53,230,396
Ensembl chr 5:53,204,260...53,239,252
JBrowse link
G Cnr2 cannabinoid receptor 2 IEP
ISO
protein:decreased expression:pancreas, acinar cell
CTD Direct Evidence: marker/mechanism
CTD
RGD
PMID:17484889 PMID:19070664 RGD:2316197 NCBI chr 5:153,408,968...153,435,092
Ensembl chr 5:153,409,147...153,435,961
JBrowse link
G Cpa1 carboxypeptidase A1 ISS OMIM:167800 MouseDO NCBI chr 4:59,257,417...59,263,544
Ensembl chr 4:60,224,801...60,230,928
JBrowse link
G Ctrb1 chymotrypsinogen B1 IEP mRNA, protein:decreased expression:pancreas RGD PMID:1716058 RGD:2303363 NCBI chr19:39,652,931...39,657,689
Ensembl chr19:56,562,220...56,566,978
JBrowse link
G Ctsl cathepsin L IEP protein:altered processing:pancreas (rat) RGD PMID:19805911 RGD:2315546 NCBI chr17:770,104...776,266
Ensembl chr17:770,093...777,113
JBrowse link
G Dusp1 dual specificity phosphatase 1 IEP mRNA:increased expression:pancreas RGD PMID:11027531 RGD:2301725 NCBI chr10:17,184,853...17,187,646
Ensembl chr10:17,184,823...17,187,644
JBrowse link
G Dusp10 dual specificity phosphatase 10 IEP mRNA:increased expression:pancreas RGD PMID:11027531 RGD:2301725 NCBI chr13:98,145,317...98,183,304
Ensembl chr13:98,145,893...98,183,304
JBrowse link
G Dusp6 dual specificity phosphatase 6 IEP mRNA:increased expression:pancreas RGD PMID:11027531 RGD:2301725 NCBI chr 7:35,979,502...35,983,834
Ensembl chr 7:35,977,921...35,983,833
JBrowse link
G Egf epidermal growth factor ISO protein:decreased expression:serum RGD PMID:20127414 RGD:2317638 NCBI chr 2:220,893,660...220,976,331
Ensembl chr 2:220,893,660...220,976,297
JBrowse link
G Egr1 early growth response 1 IEP mRNA, protein:increased expression:pancreas (rat) RGD PMID:16124058 RGD:5131939 NCBI chr18:26,737,078...26,740,877
Ensembl chr18:26,736,838...26,740,843
JBrowse link
G Fdx1 ferredoxin 1 IEP mRNA:increased expression:pancreatic acinar cell (rat) RGD PMID:12709512 RGD:4145666 NCBI chr 8:52,268,536...52,287,344
Ensembl chr 8:61,164,839...61,183,583
JBrowse link
G Fga fibrinogen alpha chain IEP protein:increased expression:pancreas, rough endoplasmic reticulum RGD PMID:19954227 RGD:5688770 NCBI chr 2:170,672,169...170,679,572
Ensembl chr 2:170,672,012...170,679,577
JBrowse link
G Fgb fibrinogen beta chain IEP protein:increased expression:pancreas, rough endoplasmic reticulum RGD PMID:19954227 RGD:5688770 NCBI chr 2:170,693,966...170,700,875
Ensembl chr 2:170,692,965...170,705,434
JBrowse link
G Fgg fibrinogen gamma chain IEP protein:increased expression:pancreas, rough endoplasmic reticulum RGD PMID:19954227 RGD:5688770 NCBI chr 2:170,652,929...170,660,372
Ensembl chr 2:170,652,234...170,661,170
JBrowse link
G Hgf hepatocyte growth factor ISO CTD Direct Evidence: therapeutic CTD PMID:14751415 NCBI chr 4:19,628,902...19,700,467
Ensembl chr 4:19,632,267...19,700,851
JBrowse link
G Hsp90ab1 heat shock protein 90 alpha family class B member 1 IEP mRNA:increased expression:lung (rat) RGD PMID:19346995 RGD:5686868 NCBI chr 9:22,930,249...22,935,929
Ensembl chr 9:22,931,070...22,935,926
JBrowse link
G Htr2a 5-hydroxytryptamine receptor 2A IDA RGD PMID:16183055 RGD:1624393 NCBI chr15:56,360,647...56,428,703
Ensembl chr15:56,359,596...56,431,619
JBrowse link
G Icam1 intercellular adhesion molecule 1 treatment ISO
IEP
protein:increased expression:serum RGD PMID:12923961 PMID:23125085 RGD:2325163, RGD:8547728 NCBI chr 8:27,829,688...27,841,618
Ensembl chr 8:27,829,161...27,841,617
JBrowse link
G Ikbkb inhibitor of nuclear factor kappa B kinase subunit beta treatment ISO RGD PMID:17525799 RGD:10045954 NCBI chr16:76,021,968...76,075,717
Ensembl chr16:76,022,008...76,081,911
JBrowse link
G Il13 interleukin 13 IEP
ISO
protein:increased expression:pancreas RGD PMID:20100461 PMID:20100461 RGD:4145466, RGD:4145466 NCBI chr10:38,290,926...38,293,483
Ensembl chr10:38,290,926...38,293,483
JBrowse link
G Il15 interleukin 15 IDA RGD PMID:20332642 RGD:4892671 NCBI chr19:42,536,160...42,611,349
Ensembl chr19:42,545,346...42,611,348
JBrowse link
G Il18 interleukin 18 treatment IEP protein:increased expression:serum RGD PMID:19238530 PMID:23983797 RGD:4889404, RGD:8655988 NCBI chr 8:59,802,072...59,829,275
Ensembl chr 8:59,809,592...59,831,286
JBrowse link
G Il1b interleukin 1 beta IDA RGD PMID:23070084 RGD:7204440 NCBI chr 3:137,030,200...137,036,581
Ensembl chr 3:137,030,205...137,036,601
JBrowse link
G Ins2 insulin 2 ISO CTD Direct Evidence: marker/mechanism CTD PMID:17163263 NCBI chr 1:207,272,738...207,421,998
Ensembl chr 1:207,272,742...207,273,805
JBrowse link
G Itgb2 integrin subunit beta 2 ISO RGD PMID:22490516 RGD:6482196 NCBI chr20:11,061,009...11,097,242
Ensembl chr20:11,058,492...11,097,182
JBrowse link
G Klk1 kallikrein 1 IEP protein:increased expression:pancreas RGD PMID:12770935 RGD:1641805 NCBI chr 1:94,642,644...94,646,760
Ensembl chr 1:103,779,164...103,783,270
JBrowse link
G Lepr leptin receptor IAGP DNA:missense mutation:CDS:p.Q269P (rat) RGD PMID:21836382 RGD:10412020 NCBI chr 5:121,409,735...121,593,201
Ensembl chr 5:121,474,099...121,591,215
JBrowse link
G Lpl lipoprotein lipase ISO CTD Direct Evidence: marker/mechanism CTD PMID:18936103 NCBI chr16:25,596,205...25,621,928
Ensembl chr16:25,596,211...25,622,107
JBrowse link
G Map2k1 mitogen activated protein kinase kinase 1 severity ISO RGD PMID:28090569 RGD:13838805 NCBI chr 8:73,578,747...73,650,184
Ensembl chr 8:73,578,752...73,650,184
JBrowse link
G Met MET proto-oncogene, receptor tyrosine kinase IEP mRNA:increased expression:pancreas (rat) RGD PMID:11737224 RGD:2317606 NCBI chr 4:46,756,823...46,864,041
Ensembl chr 4:46,756,506...46,870,821
JBrowse link
G Mir100 microRNA 100 ISO CTD Direct Evidence: marker/mechanism CTD PMID:27840954 NCBI chr 8:41,901,225...41,901,304
Ensembl chr 8:50,798,295...50,798,374
JBrowse link
G Mir130a microRNA 130a ISO CTD Direct Evidence: marker/mechanism CTD PMID:27840954 NCBI chr 3:69,822,542...69,822,629 JBrowse link
G Mir130b microRNA 130b ISO CTD Direct Evidence: marker/mechanism CTD PMID:27840954 NCBI chr11:83,880,163...83,880,244
Ensembl chr11:97,384,380...97,384,461
JBrowse link
G Mir141 microRNA 141 ISO CTD Direct Evidence: marker/mechanism CTD PMID:27840954 NCBI chr 4:157,523,239...157,523,332 JBrowse link
G Mir148a microRNA 148a ISO CTD Direct Evidence: marker/mechanism CTD PMID:27840954 NCBI chr 4:81,664,431...81,664,527 JBrowse link
G Mir150 microRNA 150 ISO CTD Direct Evidence: marker/mechanism CTD PMID:27840954 NCBI chr 1:104,741,487...104,741,571
Ensembl chr 1:104,741,487...104,741,571
JBrowse link
G Mir155 microRNA 155 ISO CTD Direct Evidence: marker/mechanism CTD PMID:27840954 NCBI chr11:37,261,114...37,261,178
Ensembl chr11:37,261,114...37,261,178
JBrowse link
G Mir181c microRNA 181c ISO CTD Direct Evidence: marker/mechanism CTD PMID:27840954 NCBI chr19:40,888,291...40,888,396
Ensembl chr19:40,888,291...40,888,396
JBrowse link
G Mir181d microRNA 181d ISO CTD Direct Evidence: marker/mechanism CTD PMID:27840954 NCBI chr19:23,983,706...23,983,788
Ensembl chr19:40,888,474...40,888,556
JBrowse link
G Mir182 microRNA 182 ISO CTD Direct Evidence: marker/mechanism CTD PMID:27840954 NCBI chr 4:59,752,246...59,752,307 JBrowse link
G Mir183 microRNA 183 ISO CTD Direct Evidence: marker/mechanism CTD PMID:27840954 NCBI chr 4:59,756,044...59,756,153 JBrowse link
G Mir192 microRNA 192 ISO CTD Direct Evidence: marker/mechanism CTD PMID:27840954 NCBI chr 1:212,994,209...212,994,318
Ensembl chr 1:212,994,209...212,994,318
JBrowse link
G Mir200a microRNA 200a ISO CTD Direct Evidence: marker/mechanism CTD PMID:27840954 NCBI chr 5:171,930,717...171,930,805 JBrowse link
G Mir200b microRNA 200b ISO CTD Direct Evidence: marker/mechanism CTD PMID:27840954 NCBI chr 5:171,931,495...171,931,589 JBrowse link
G Mir200c microRNA 200c ISO CTD Direct Evidence: marker/mechanism CTD PMID:27840954 NCBI chr 4:159,209,965...159,210,033 JBrowse link
G Mir20b microRNA 20b ISO CTD Direct Evidence: marker/mechanism CTD PMID:27840954 NCBI chr  X:132,422,211...132,422,282 JBrowse link
G Mir214 microRNA 214 ISO CTD Direct Evidence: marker/mechanism CTD PMID:27840954 NCBI chr13:77,121,645...77,121,752
Ensembl chr13:77,121,643...77,121,752
JBrowse link
G Mir216a microRNA 216a ISO CTD Direct Evidence: marker/mechanism CTD PMID:27840954 NCBI chr14:102,524,105...102,524,210
Ensembl chr14:106,725,077...106,725,182
JBrowse link
G Mir216b microRNA 216b ISO CTD Direct Evidence: marker/mechanism CTD PMID:27840954 NCBI chr14:102,513,054...102,513,155
Ensembl chr14:106,714,026...106,714,127
JBrowse link
G Mir217 microRNA 217 ISO CTD Direct Evidence: marker/mechanism CTD PMID:27840954 NCBI chr14:106,732,485...106,732,589
Ensembl chr14:106,732,485...106,732,589
JBrowse link
G Mir22 microRNA 22 ISO CTD Direct Evidence: marker/mechanism CTD PMID:27840954 NCBI chr10:60,307,039...60,307,133
Ensembl chr10:60,805,331...60,805,425
JBrowse link
G Mir27a microRNA 27a ISO CTD Direct Evidence: marker/mechanism CTD PMID:27840954 NCBI chr19:40,859,603...40,859,689 JBrowse link
G Mir27b microRNA 27b ISO CTD Direct Evidence: marker/mechanism CTD PMID:27840954 NCBI chr17:1,819,147...1,819,243 JBrowse link
G Mir29a microRNA 29a ISO CTD Direct Evidence: marker/mechanism CTD PMID:27840954 NCBI chr 4:60,617,955...60,618,042 JBrowse link
G Mir30a microRNA 30a ISO CTD Direct Evidence: marker/mechanism CTD PMID:27840954 NCBI chr 9:33,233,941...33,234,011
Ensembl chr 9:33,233,941...33,234,011
JBrowse link
G Mir30b microRNA 30b ISO CTD Direct Evidence: marker/mechanism CTD PMID:27840954 NCBI chr 7:102,021,543...102,021,629 JBrowse link
G Mir31 microRNA 31 ISO CTD Direct Evidence: marker/mechanism CTD PMID:27840954 NCBI chr 5:103,599,038...103,599,143 JBrowse link
G Mir361 microRNA 361 ISO CTD Direct Evidence: marker/mechanism CTD PMID:27840954 NCBI chr  X:78,246,206...78,246,275 JBrowse link
G Mir375 microRNA 375 ISO CTD Direct Evidence: marker/mechanism CTD PMID:27840954 NCBI chr 9:83,906,582...83,906,656 JBrowse link
G Mir429 microRNA 429 ISO CTD Direct Evidence: marker/mechanism CTD PMID:27840954 NCBI chr 5:171,929,682...171,929,766 JBrowse link
G Mir532 microRNA 532 ISO CTD Direct Evidence: marker/mechanism CTD PMID:27840954 NCBI chr  X:17,919,185...17,919,263
Ensembl chr  X:17,919,185...17,919,263
JBrowse link
G Mpo myeloperoxidase ISO CTD Direct Evidence: marker/mechanism CTD PMID:16440434 NCBI chr10:73,092,124...73,102,057
Ensembl chr10:73,092,400...73,102,056
JBrowse link
G Mt-atp8 mitochondrially encoded ATP synthase membrane subunit 8 susceptibility ISO DNA:transversion: :m.7778G>T (mouse) RGD PMID:19759059 RGD:5490297 NCBI chr MT:7,758...7,961
Ensembl chr MT:7,743...7,946
JBrowse link
G Nod2 nucleotide-binding oligomerization domain containing 2 IEP protein, mRNA:decreased expression:pancreas, blood cells RGD PMID:20442679 RGD:5131438 NCBI chr19:34,555,832...34,596,281
Ensembl chr19:34,555,832...34,722,846
JBrowse link
G Nupr1 nuclear protein 1, transcriptional regulator ISO CTD Direct Evidence: marker/mechanism CTD PMID:16822955 NCBI chr 1:190,643,866...190,645,901
Ensembl chr 1:190,643,867...190,645,901
JBrowse link
G Parp1 poly (ADP-ribose) polymerase 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:16127429 NCBI chr13:94,839,484...94,871,295
Ensembl chr13:94,839,433...94,871,567
JBrowse link
G Pdgfa platelet derived growth factor subunit A IEP associated with Reperfusion Injury;protein:increased expression:blood vessel RGD PMID:16601314 RGD:2292161 NCBI chr12:20,759,366...20,780,337
Ensembl chr12:20,754,208...20,780,322
JBrowse link
G Pdgfb platelet derived growth factor subunit B ISO protein: increased expression: serum RGD PMID:21750433 RGD:6483007 NCBI chr 7:113,419,882...113,438,343
Ensembl chr 7:113,420,710...113,438,343
JBrowse link
G Pparg peroxisome proliferator-activated receptor gamma IMP RGD PMID:18583255 RGD:2301875 NCBI chr 4:150,095,743...150,221,104
Ensembl chr 4:150,095,787...150,221,104
JBrowse link
G Ppp3ca protein phosphatase 3 catalytic subunit alpha ISO CTD Direct Evidence: marker/mechanism CTD PMID:22952646 NCBI chr 2:227,839,058...228,113,560
Ensembl chr 2:227,839,062...228,113,554
JBrowse link
G Prss1 serine protease 1 susceptibility ISO
IEP
protein:mutation: :p.R117H (human)
ClinVar Annotator: match by term: Recurrent pancreatitis
CTD Direct Evidence: marker/mechanism
protein:increased expression:cytosol
ClinVar
CTD
RGD
PMID:10381903 PMID:11260229 PMID:15017610 PMID:16036133 PMID:16505482 More... RGD:1599960, RGD:1599965 NCBI chr 4:70,364,589...70,367,792
Ensembl chr 4:71,331,246...71,334,452
JBrowse link
G Ptgs2 prostaglandin-endoperoxide synthase 2 onset ISO CTD Direct Evidence: marker/mechanism CTD
RGD
PMID:19820421 PMID:21372163 RGD:5508226 NCBI chr13:64,714,063...64,722,320
Ensembl chr13:64,713,619...64,722,320
JBrowse link
G Rhob ras homolog family member B ISO ClinVar Annotator: match by term: Recurrent pancreatitis ClinVar PMID:25741868 PMID:32989326 NCBI chr 6:37,083,030...37,085,204
Ensembl chr 6:37,075,015...37,112,772
JBrowse link
G RT1-Ba RT1 class II, locus Ba ISO CTD Direct Evidence: marker/mechanism CTD PMID:25217962 NCBI chr20:4,577,057...4,581,650
Ensembl chr20:4,576,843...4,581,653
JBrowse link
G RT1-Db1 RT1 class II, locus Db1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:25217962 NCBI chr20:4,550,594...4,560,182
Ensembl chr20:4,550,596...4,560,165
JBrowse link
G Sell selectin L IEP RGD PMID:16214426 RGD:5685705 NCBI chr13:78,950,100...78,969,604
Ensembl chr13:78,950,015...78,969,600
JBrowse link
G Serpina1 serpin family A member 1 IEP RGD PMID:12770935 RGD:1641805 NCBI chr 6:128,631,101...128,653,125
Ensembl chr 6:128,619,382...128,660,703
JBrowse link
G Serping1 serpin family G member 1 treatment ISO RGD PMID:9176084 RGD:8661649 NCBI chr 3:90,249,410...90,259,299
Ensembl chr 3:90,249,423...90,258,717
JBrowse link
G Smo smoothened, frizzled class receptor IEP protein:increased expression:pancreas RGD PMID:20062892 RGD:2324983 NCBI chr 4:59,311,084...59,341,280
Ensembl chr 4:59,311,041...59,341,281
JBrowse link
G Spink1 serine peptidase inhibitor, Kazal type 1 ISO CTD Direct Evidence: marker/mechanism
ClinVar Annotator: match by term: Pancreatitis
CTD
ClinVar
PMID:10691414 PMID:10835640 PMID:11950815 PMID:12011155 PMID:12187509 More... NCBI chr18:36,121,626...36,133,596
Ensembl chr18:36,076,399...36,133,545
JBrowse link
G Srf serum response factor ISO RGD PMID:16894357 RGD:1581427 NCBI chr 9:21,924,050...21,933,338
Ensembl chr 9:21,924,076...21,933,337
JBrowse link
G Sst somatostatin ISO CTD Direct Evidence: therapeutic CTD PMID:7911442 NCBI chr11:90,461,546...90,462,823
Ensembl chr11:90,461,546...90,462,823
JBrowse link
G Tac1 tachykinin, precursor 1 ISO mRNA:increased expression:lung, pancreas RGD PMID:16369913 RGD:5147636 NCBI chr 4:36,645,344...36,653,548
Ensembl chr 4:36,645,571...36,653,546
JBrowse link
G Tacr1 tachykinin receptor 1 IMP
ISO
mRNA, protein:increased expression:lung, pancreas RGD PMID:18580444 PMID:16369913 RGD:2304266, RGD:5147636 NCBI chr 4:114,920,844...115,089,733
Ensembl chr 4:116,478,617...116,647,492
JBrowse link
G Tlr2 toll-like receptor 2 IEP RGD PMID:19260515 RGD:2312507 NCBI chr 2:171,499,189...171,504,831
Ensembl chr 2:171,497,060...171,520,194
JBrowse link
G Tlr3 toll-like receptor 3 IEP protein:increased expression:spinal cord dorsal horn (rat) RGD PMID:21342497 RGD:5128695 NCBI chr16:53,554,916...53,572,321
Ensembl chr16:53,555,131...53,568,385
JBrowse link
G Tlr4 toll-like receptor 4 ISO
IEP
RGD PMID:19201771 PMID:19260515 RGD:4144143, RGD:2312507 NCBI chr 5:85,161,247...85,174,882
Ensembl chr 5:85,161,192...85,175,007
JBrowse link
G Tmem67 transmembrane protein 67 ISO ClinVar Annotator: match by term: Pancreatitis ClinVar PMID:19466712 PMID:19508969 PMID:19540516 PMID:19574260 PMID:20607301 More... NCBI chr 5:30,333,793...30,386,702
Ensembl chr 5:30,333,793...30,386,666
JBrowse link
G Trpv1 transient receptor potential cation channel, subfamily V, member 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:17698068 NCBI chr10:58,349,936...58,375,021
Ensembl chr10:58,340,223...58,375,021
JBrowse link
G Vcam1 vascular cell adhesion molecule 1 ISO protein:increased expression:serum RGD PMID:12923961 RGD:2325163 NCBI chr 2:206,723,050...206,742,783
Ensembl chr 2:206,723,044...206,742,801
JBrowse link
G Xdh xanthine dehydrogenase IEP RGD PMID:14728722 RGD:7247701 NCBI chr 6:27,282,319...27,344,022
Ensembl chr 6:27,282,057...27,344,350
JBrowse link
renal-hepatic-pancreatic dysplasia term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nphp3 nephrocystin 3 ISO ClinVar Annotator: match by term: Renal-hepatic-pancreatic dysplasia ClinVar PMID:25741868 NCBI chr 8:113,500,708...113,541,179
Ensembl chr 8:113,500,509...113,541,179
JBrowse link
Renal-Hepatic-Pancreatic Dysplasia 1 term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nphp3 nephrocystin 3 ISO ClinVar Annotator: match by term: Renal-hepatic-pancreatic dysplasia 1 OMIM
ClinVar
PMID:8874114 PMID:9536098 PMID:12872122 PMID:16199547 PMID:17576681 More... NCBI chr 8:113,500,708...113,541,179
Ensembl chr 8:113,500,509...113,541,179
JBrowse link
Renal-Hepatic-Pancreatic Dysplasia 2 term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nek8 NIMA-related kinase 8 ISO ClinVar Annotator: match by term: Renal-hepatic-pancreatic dysplasia 2 OMIM
ClinVar
PMID:19550299 PMID:23418306 PMID:25741868 PMID:25741876 PMID:26697755 More... NCBI chr10:63,558,940...63,570,954
Ensembl chr10:63,558,788...63,570,488
JBrowse link
Shwachman-Diamond syndrome term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dnajc21 DnaJ heat shock protein family (Hsp40) member C21 ISO CTD Direct Evidence: marker/mechanism
ClinVar Annotator: match by term: Shwachman syndrome | ClinVar Annotator: match by term: Shwachman-Diamond syndrome 1
CTD
ClinVar
PMID:16199547 PMID:25741868 PMID:27346687 PMID:28062395 PMID:28492532 More... NCBI chr 2:59,419,507...59,446,746
Ensembl chr 2:61,145,142...61,174,126
JBrowse link
G Efl1 elongation factor like GTPase 1 ISO ClinVar Annotator: match by term: Shwachman syndrome ClinVar PMID:25741868 PMID:28331068 PMID:28492532 PMID:29970384 PMID:31151987 More... NCBI chr 1:136,638,527...136,763,518
Ensembl chr 1:146,048,592...146,173,532
JBrowse link
G Sbds Sbds, ribosome maturation factor ISO
ISS
DNA:mutations:multiple
ClinVar Annotator: match by term: Shwachman-Diamond syndrome 1
OMIM:260400
CTD Direct Evidence: marker/mechanism
OMIM
ClinVar
MouseDO
CTD
RGD
PMID:12496757 PMID:14749921 PMID:15284109 PMID:15769891 PMID:15860664 More... RGD:1599541 NCBI chr12:32,056,649...32,065,816
Ensembl chr12:32,056,518...32,065,813
JBrowse link
G Serpini2 serpin family I member 2 ISS OMIM:260400 MouseDO NCBI chr 2:160,014,721...160,044,271
Ensembl chr 2:162,313,324...162,342,884
JBrowse link
G Srp19 signal recognition particle 19 ISO ClinVar Annotator: match by term: Shwachman-Diamond syndrome 1 ClinVar NCBI chr18:25,931,734...25,937,974
Ensembl chr18:26,205,796...26,226,635
JBrowse link
G Srp54a signal recognition particle 54A ISO CTD Direct Evidence: marker/mechanism
ClinVar Annotator: match by term: Shwachman-Diamond syndrome 1
CTD
ClinVar
PMID:25741868 PMID:28492532 PMID:28972538 PMID:29914977 NCBI chr 6:72,587,584...72,626,878
Ensembl chr 6:78,322,721...78,362,031
JBrowse link
G Srpra SRP receptor subunit alpha ISO ClinVar Annotator: match by term: Shwachman-Diamond syndrome 1 ClinVar NCBI chr 8:41,818,199...41,824,292
Ensembl chr 8:41,818,229...41,824,280
JBrowse link
Shwachman-Diamond Syndrome 2 term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Efl1 elongation factor like GTPase 1 ISO ClinVar Annotator: match by term: EFL1-related condition | ClinVar Annotator: match by term: Shwachman-Diamond syndrome 2 OMIM
ClinVar
PMID:25741868 PMID:28331068 PMID:28492532 PMID:29970384 PMID:31151987 More... NCBI chr 1:136,638,527...136,763,518
Ensembl chr 1:146,048,592...146,173,532
JBrowse link
Tropical Calcific Pancreatitis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Spink1 serine peptidase inhibitor, Kazal type 1 ISO CTD Direct Evidence: marker/mechanism CTD
OMIM
NCBI chr18:36,121,626...36,133,596
Ensembl chr18:36,076,399...36,133,545
JBrowse link
vipoma term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ifna1 interferon, alpha 1 ISO CTD Direct Evidence: therapeutic CTD PMID:17961653 NCBI chr 5:108,143,240...108,143,809
Ensembl chr 5:108,143,240...108,143,809
JBrowse link
G Men1 menin 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:17961653 NCBI chr 1:213,068,166...213,074,132
Ensembl chr 1:213,068,166...213,074,120
JBrowse link
G Sst somatostatin ISO CTD Direct Evidence: therapeutic CTD PMID:2868874 NCBI chr11:90,461,546...90,462,823
Ensembl chr11:90,461,546...90,462,823
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  disease 19167
    disease of anatomical entity 18473
      gastrointestinal system disease 7168
        pancreas disease 1250
          Infantile-Onset Multisystem Neurologic, Endocrine, and Pancreatic Disease + 5
          Pancreatic Cyst + 4
          Pancreatic Fistula 1
          Pancreatic Lipase Deficiency 1
          Pancreatic Lipomatosis Duodenal Stenosis 0
          Pancreatic Neoplasms + 417
          annular pancreas 2
          cystic fibrosis + 116
          endocrine pancreas disease + 659
          exocrine pancreatic insufficiency + 13
          neurohypophyseal diabetes insipidus + 1
          opisthorchiasis 2
          pancreatic agenesis + 6
          pancreatic mucinous ductal ectasia 0
          pancreatic steatorrhea 0
          pancreatitis + 222
          renal-hepatic-pancreatic dysplasia + 2
paths to the root