RGD DISEASE ONTOLOGY - ANNOTATIONS |
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RGD uses the Human Disease Ontology (DO, https://disease-ontology.org/) for disease curation across species. RGD automatically downloads each new release of the ontology on a monthly basis. Some additional terms which are required for RGD's curation purposes but are not currently covered in the official version of DO have been added. As corresponding terms are added to DO, these custom terms are retired and the DO terms substituted in existing annotations and subsequently used for curation.
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Term: | connective tissue cancer |
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Accession: | DOID:201
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browse the term
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Definition: | A musculoskeletal system cancer that is located_in connective tissue. (DO) |
Synonyms: | exact_synonym: | mesenchymal tissue malignant neoplasm |
For additional species annotation, visit the
Alliance of Genome Resources.
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GViewer not supported for the selected species.
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Traf7 |
TNF receptor associated factor 7 |
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ISO |
DNA:missense mutations:multiple |
RGD |
PMID:29148537 |
RGD:151356962 |
NCBI chrNW_004936694:1,868,309...1,886,772
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Mmp1 |
matrix metallopeptidase 1 |
susceptibility |
ISO |
DNA:insertion:promoter:g.-1607insG (human) |
RGD |
PMID:17502998 |
RGD:7207034 |
NCBI chrNW_004936551:5,167,909...5,175,149
Ensembl chrNW_004936551:5,168,044...5,174,857
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Bcl2 |
BCL2 apoptosis regulator |
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ISO |
CTD Direct Evidence: marker/mechanism |
CTD |
PMID:10861090 |
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NCBI chrNW_004936497:2,209,136...2,373,580
Ensembl chrNW_004936497:2,210,334...2,210,921
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Atrx |
ATRX chromatin remodeler |
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ISO |
ClinVar Annotator: match by term: Astrocytoma, anaplastic |
ClinVar |
PMID:7697714 PMID:8968741 PMID:18414213 PMID:22995991 PMID:24082139 PMID:24728327 PMID:25741868 PMID:26467025 PMID:28293299 PMID:28492530 PMID:28492532 PMID:29304373 PMID:29602769 PMID:29910053 More...
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NCBI chrNW_004936683:2,496,307...2,718,539
Ensembl chrNW_004936683:2,495,959...2,718,620
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Kras |
KRAS proto-oncogene, GTPase |
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ISO |
mRNA:decreased expression:brain |
RGD |
PMID:19179066 |
RGD:13702872 |
NCBI chrNW_004936548:2,078,568...2,113,877
Ensembl chrNW_004936548:2,079,036...2,110,523
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Tp53 |
tumor protein p53 |
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ISO |
ClinVar Annotator: match by term: Astrocytoma, anaplastic |
ClinVar |
PMID:1349175 PMID:1565143 PMID:1565144 PMID:1591732 PMID:1631137 PMID:2046748 PMID:4122735 PMID:7565304 PMID:7783166 PMID:8401536 PMID:8402598 PMID:8425176 PMID:8550239 PMID:8718514 PMID:8829627 PMID:9218725 PMID:9242456 PMID:9364015 PMID:9667734 PMID:10519380 PMID:10922393 PMID:11370630 PMID:11782540 PMID:12826609 PMID:12885464 PMID:12917626 PMID:15722483 PMID:15781620 PMID:15925506 PMID:15951970 PMID:15958617 PMID:16206219 PMID:16401470 PMID:16494995 PMID:16551709 PMID:16818505 PMID:17015838 PMID:17311302 PMID:17606709 PMID:18511570 PMID:19012332 PMID:19468865 PMID:20128691 PMID:20407015 PMID:20522432 PMID:21059199 PMID:21305319 PMID:21343334 PMID:21519010 PMID:21761402 PMID:22186996 PMID:22672556 PMID:22915647 PMID:23161690 PMID:23246812 PMID:23538418 PMID:24033266 PMID:24122735 PMID:24573247 PMID:24835218 PMID:24857548 PMID:25186627 PMID:25584008 PMID:25619955 PMID:25741868 PMID:25952993 PMID:26014290 PMID:26205489 PMID:26225655 PMID:26230955 PMID:26585234 PMID:26786923 PMID:26845104 PMID:26878390 PMID:26911350 PMID:27077130 PMID:27276561 PMID:27463065 PMID:27621308 PMID:27680515 PMID:27895058 PMID:27959731 PMID:28369373 PMID:28472496 PMID:28492532 PMID:28975465 PMID:29581140 PMID:29979965 PMID:30224644 PMID:30327374 PMID:30709381 PMID:30816478 PMID:32000721 PMID:32156018 PMID:32475984 PMID:32817165 PMID:32888145 PMID:33163847 PMID:33245408 PMID:33300245 PMID:33407742 PMID:33840814 PMID:34529667 PMID:34670578 PMID:34709361 PMID:35974385 PMID:36988593 More...
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NCBI chrNW_004936595:919,807...935,367
Ensembl chrNW_004936595:919,428...925,425
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Palb2 |
partner and localizer of BRCA2 |
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ISO |
ClinVar Annotator: match by term: Anaplastic ependymoma |
ClinVar |
PMID:21285249 PMID:25085752 PMID:25741868 PMID:26315354 PMID:26467025 PMID:26580448 PMID:26689913 PMID:27616075 PMID:28492532 PMID:28678401 PMID:31636395 PMID:33471991 More...
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NCBI chrNW_004936501:8,246,927...8,273,258
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Rnf213 |
ring finger protein 213 |
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ISO |
ClinVar Annotator: match by term: Anaplastic ependymoma |
ClinVar |
PMID:26822237 |
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NCBI chrNW_004936594:4,241,006...4,331,841
Ensembl chrNW_004936594:4,241,396...4,331,868
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Ogg1 |
8-oxoguanine DNA glycosylase |
no_association |
ISO |
associated with Tuberous Sclerosis;mRNA, protein:decreased expression:kidney associated with Tuberous Sclerosis;DNA:SNP: :p.S326C (rs1052133)(human) associated with Tuberous Sclerosis;DNA:missense mutations: :p.R45Q, p.A85S, p.R229Q (human) |
RGD |
PMID:17932460 PMID:19265534 |
RGD:8657154 RGD:8657155 |
NCBI chrNW_004936602:3,411,106...3,418,826
Ensembl chrNW_004936602:3,413,282...3,418,831
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Pten |
phosphatase and tensin homolog |
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ISO |
protein:increased expression:kidney (human) |
RGD |
PMID:22737271 |
RGD:12802360 |
NCBI chrNW_004936735:1,252,414...1,338,318
Ensembl chrNW_004936735:1,252,414...1,338,323
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Stat1 |
signal transducer and activator of transcription 1 |
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ISO |
protein:increased serine phosphorylation:kidney |
RGD |
PMID:15994429 |
RGD:2298537 |
NCBI chrNW_004936506:7,196,860...7,235,854
Ensembl chrNW_004936506:7,196,797...7,233,756
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Stat3 |
signal transducer and activator of transcription 3 |
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ISO |
protein:increased tyrosine phosphorylation:kidney |
RGD |
PMID:15994429 |
RGD:2298537 |
NCBI chrNW_004936490:17,119,189...17,178,402
Ensembl chrNW_004936490:17,117,290...17,178,402
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Tsc2 |
TSC complex subunit 2 |
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ISO |
associated with Tuberous Sclerosis;protein:decreased expression, increased threonine phosphorylation:kidney |
RGD |
PMID:19265534 |
RGD:8657154 |
NCBI chrNW_004936694:1,958,152...1,993,373
Ensembl chrNW_004936694:1,958,154...1,993,363
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Pik3r1 |
phosphoinositide-3-kinase regulatory subunit 1 |
severity |
ISO |
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RGD |
PMID:26286747 PMID:26956052 |
RGD:11343921 RGD:13782052 |
NCBI chrNW_004936480:1,188,408...1,273,210
Ensembl chrNW_004936480:1,188,183...1,273,537
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Pole |
DNA polymerase epsilon, catalytic subunit |
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ISO |
ClinVar Annotator: match by term: Neuroepithelial neoplasm |
ClinVar |
PMID:24033266 PMID:25741868 PMID:26467025 PMID:28492532 PMID:29987844 |
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NCBI chrNW_004936660:2,575,255...2,622,867
Ensembl chrNW_004936660:2,575,360...2,622,852
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Atm |
ATM serine/threonine kinase |
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ISO |
ClinVar Annotator: match by term: Astroblastoma, MN1-altered |
ClinVar |
PMID:17344846 PMID:20305132 PMID:25741868 PMID:25980754 PMID:26206375 PMID:26467025 PMID:26689913 PMID:26787654 PMID:28135145 PMID:28492532 PMID:28652578 PMID:28779002 PMID:30306255 PMID:30441849 PMID:31159747 PMID:31920950 PMID:32606146 PMID:33471991 PMID:34284872 PMID:35886069 More...
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NCBI chrNW_004936551:359,134...534,672
Ensembl chrNW_004936551:359,362...532,211
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CUNH11orf65 |
chromosome unknown C11orf65 homolog |
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ISO |
ClinVar Annotator: match by term: Astroblastoma, MN1-altered |
ClinVar |
PMID:17344846 PMID:20305132 PMID:25741868 PMID:25980754 PMID:26206375 PMID:26467025 PMID:26689913 PMID:26787654 PMID:28135145 PMID:28492532 PMID:28652578 PMID:28779002 PMID:30306255 PMID:30441849 PMID:31159747 PMID:31920950 PMID:32606146 PMID:33471991 PMID:34284872 PMID:35886069 More...
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NCBI chrNW_004936551:305,617...343,369
Ensembl chrNW_004936551:305,611...351,063
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G |
Tsc2 |
TSC complex subunit 2 |
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ISO |
ClinVar Annotator: match by term: Astroblastoma, MN1-altered |
ClinVar |
PMID:25741868 PMID:28492532 |
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NCBI chrNW_004936694:1,958,152...1,993,373
Ensembl chrNW_004936694:1,958,154...1,993,363
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Atrx |
ATRX chromatin remodeler |
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ISO |
ClinVar Annotator: match by term: Bone osteosarcoma |
ClinVar |
PMID:7697714 PMID:23820649 PMID:24690944 PMID:24805811 PMID:25741868 PMID:28371217 PMID:28492532 More...
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NCBI chrNW_004936683:2,496,307...2,718,539
Ensembl chrNW_004936683:2,495,959...2,718,620
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Chek2 |
checkpoint kinase 2 |
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ISO |
ClinVar Annotator: match by term: Bone osteosarcoma |
ClinVar |
PMID:3313277 PMID:9536098 PMID:10617473 PMID:11053450 PMID:11298456 PMID:11390408 PMID:11461078 PMID:11479205 PMID:11571648 PMID:11719428 PMID:11746983 PMID:11901158 PMID:11967536 PMID:12049740 PMID:12094328 PMID:12454775 PMID:12533788 PMID:12610780 PMID:12690581 PMID:12805407 PMID:14612911 PMID:14618615 PMID:14648717 PMID:14648718 PMID:14648719 PMID:14687034 PMID:15087378 PMID:15095295 PMID:15122511 PMID:15239132 PMID:15466005 PMID:15488637 PMID:15492928 PMID:15520402 PMID:15649950 PMID:15810020 PMID:15818573 PMID:16199547 PMID:16257342 PMID:16492927 PMID:16551709 PMID:16574953 PMID:16816021 PMID:16835864 PMID:16880452 PMID:16883537 PMID:16914568 PMID:16941491 PMID:16982735 PMID:17085682 PMID:17517688 PMID:17576681 PMID:17698850 PMID:17721994 PMID:18058223 PMID:18085035 PMID:18172190 PMID:18281249 PMID:18381420 PMID:18484200 PMID:18571837 PMID:18706089 PMID:18725878 PMID:18725978 PMID:18759107 PMID:18930998 PMID:18996005 PMID:19030985 PMID:19338683 PMID:19609724 PMID:19768534 PMID:19782031 PMID:19805189 PMID:19876921 PMID:20417869 PMID:20713355 PMID:21059199 PMID:21244692 PMID:21356067 PMID:21514219 PMID:21562711 PMID:21618645 PMID:21744992 PMID:21778326 PMID:21779515 PMID:21807500 PMID:21876083 PMID:21956126 PMID:22006311 PMID:22058216 PMID:22058428 PMID:22114986 PMID:22419737 PMID:22799331 PMID:22811390 PMID:22901170 PMID:22994785 PMID:23109706 PMID:23296741 PMID:23318652 PMID:23334666 PMID:23469205 PMID:23555315 PMID:23652375 PMID:23713947 PMID:23806170 PMID:23946381 PMID:23960188 PMID:24033266 PMID:24113346 PMID:24390236 PMID:24506336 PMID:24556621 PMID:24599715 PMID:24628946 PMID:24713400 PMID:24728327 PMID:24763289 PMID:24880342 PMID:24884479 PMID:25085752 PMID:25117502 PMID:25186627 PMID:25231023 PMID:25318351 PMID:25431674 PMID:25452441 PMID:25503501 PMID:25525159 PMID:25583358 PMID:25629968 PMID:25741868 PMID:25798211 PMID:25884806 PMID:25980754 PMID:26023681 PMID:26083025 PMID:26084796 PMID:26094658 PMID:26270727 PMID:26446916 PMID:26467025 PMID:26506619 PMID:26534844 PMID:26580448 PMID:26644315 PMID:26681312 PMID:26687385 PMID:26689913 PMID:26787654 PMID:26822949 PMID:26845104 PMID:26884562 PMID:26976419 PMID:27023146 PMID:27028851 PMID:27039729 PMID:27153395 PMID:27223485 PMID:27269948 PMID:27273131 PMID:27296296 PMID:27318168 PMID:27433846 PMID:27442652 PMID:27443514 PMID:27488870 PMID:27498913 PMID:27510020 PMID:27534895 PMID:27553368 PMID:27595995 PMID:27616075 PMID:27621404 PMID:27632928 PMID:27696107 PMID:27708748 PMID:27711073 PMID:27716369 PMID:27751358 PMID:27779110 PMID:27782108 PMID:27783279 PMID:27798748 PMID:27806230 PMID:27878467 PMID:27978560 PMID:28008555 PMID:28051113 PMID:28082821 PMID:28125075 PMID:28135139 PMID:28135145 PMID:28195393 PMID:28211887 PMID:28486781 PMID:28492532 PMID:28495237 PMID:28503720 PMID:28514723 PMID:28580595 PMID:28709830 PMID:28724667 PMID:28727877 PMID:28734145 PMID:28779002 PMID:28802053 PMID:28828701 PMID:28873162 PMID:28874143 PMID:28944238 PMID:28961279 PMID:28981386 PMID:29020732 PMID:29095881 PMID:29212164 PMID:29335925 PMID:29338689 PMID:29351919 PMID:29356917 PMID:29368341 PMID:29439820 PMID:29470806 PMID:29484706 PMID:29489754 PMID:29506128 PMID:29520813 PMID:29522266 PMID:29596542 PMID:29659569 PMID:29667044 PMID:29752822 PMID:29758562 PMID:29785007 PMID:29785153 PMID:29875428 PMID:29902706 PMID:29909568 PMID:29915322 PMID:29922827 PMID:29945567 PMID:29958926 PMID:29961768 PMID:29978187 PMID:29987844 PMID:30067863 PMID:30128536 PMID:30152102 PMID:30256826 PMID:30264118 PMID:30287823 PMID:30303537 PMID:30322717 PMID:30322893 PMID:30344923 PMID:30374176 PMID:30426508 PMID:30441849 PMID:30580288 PMID:30613976 PMID:30666157 PMID:30672594 PMID:30676620 PMID:30826992 PMID:30851065 PMID:30927251 PMID:31050813 PMID:31090900 PMID:31159747 PMID:31206626 PMID:31214250 PMID:31214711 PMID:31220302 PMID:31263054 PMID:31263571 PMID:31300551 PMID:31360903 PMID:31398194 PMID:31409080 PMID:31415627 PMID:31422574 PMID:31447099 PMID:31472684 PMID:31512090 PMID:31589614 PMID:31614935 PMID:31742824 PMID:31780696 PMID:31811167 PMID:31843900 PMID:31844177 PMID:31871297 PMID:31948886 PMID:31980526 PMID:31993860 PMID:32029870 PMID:32091409 PMID:32119081 PMID:32243226 PMID:32255556 PMID:32283892 PMID:32285038 PMID:32295079 PMID:32310333 PMID:32338768 PMID:32383162 PMID:32521533 PMID:32531112 PMID:32546565 PMID:32566746 PMID:32658311 PMID:32659967 PMID:32830346 PMID:32832836 PMID:32875559 PMID:32885271 PMID:32906215 PMID:32957588 PMID:32959997 PMID:33030641 PMID:33077847 PMID:33128190 PMID:33134171 PMID:33158149 PMID:33179747 PMID:33309985 PMID:33326660 PMID:33471974 PMID:33471991 PMID:33558524 PMID:33606978 PMID:33670479 PMID:33692755 PMID:33726816 PMID:33803639 PMID:33804961 PMID:33919281 PMID:33925588 PMID:33980423 PMID:33986034 PMID:34008015 PMID:34130653 PMID:34282249 PMID:34299313 PMID:34308366 PMID:34326862 PMID:34570182 PMID:34622392 PMID:34630562 PMID:34903604 PMID:34933735 PMID:34992046 PMID:35220195 PMID:35264596 PMID:35350808 PMID:35402282 PMID:35441217 PMID:35495172 PMID:35534704 PMID:35643632 PMID:35886069 PMID:35957908 PMID:36035419 PMID:36136322 PMID:36222830 PMID:36315097 PMID:36360192 PMID:36468172 PMID:36653541 PMID:36717774 PMID:36845387 PMID:36988593 PMID:37055167 PMID:37149759 PMID:37262986 PMID:37449874 PMID:37490054 More...
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NCBI chrNW_004936657:2,805,947...2,848,180
Ensembl chrNW_004936657:2,805,959...2,848,180
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Efemp2 |
EGF containing fibulin extracellular matrix protein 2 |
exacerbates disease_progression |
ISO |
mRNA, protein:increased expression:bone tissue (human ) protein:increased expression:bone tissue (human) |
RGD |
PMID:27157136 PMID:28339091 |
RGD:42722011 RGD:42722013 |
NCBI chrNW_004936599:3,663,288...3,670,048
Ensembl chrNW_004936599:3,663,326...3,670,047
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Rb1 |
RB transcriptional corepressor 1 |
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ISO |
ClinVar Annotator: match by term: Bone osteosarcoma |
ClinVar |
PMID:1352883 PMID:2594029 PMID:2601691 PMID:7881418 PMID:8651278 PMID:9311732 PMID:9632788 PMID:9671401 PMID:9973307 PMID:10486322 PMID:10966849 PMID:12016586 PMID:12541220 PMID:12955724 PMID:14722923 PMID:15605413 PMID:15643604 PMID:15776430 PMID:15884040 PMID:16269091 PMID:16449662 PMID:16463005 PMID:17096365 PMID:17960112 PMID:18000883 PMID:18677112 PMID:18682685 PMID:20041224 PMID:20447117 PMID:22205104 PMID:22328814 PMID:22963398 PMID:23532519 PMID:24225018 PMID:24688104 PMID:24791139 PMID:25741868 PMID:25754945 PMID:25758528 PMID:26396485 PMID:26580448 PMID:26787237 PMID:26925970 PMID:27582626 PMID:27983729 PMID:28492532 PMID:28575107 PMID:28724667 PMID:28873162 PMID:29261756 PMID:30031154 PMID:32218800 PMID:33493472 PMID:34294096 More...
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NCBI chrNW_004936565:1,596,227...1,746,706
Ensembl chrNW_004936565:1,597,593...1,746,846
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G |
Tp53 |
tumor protein p53 |
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ISO |
ClinVar Annotator: match by term: Bone osteosarcoma |
ClinVar |
PMID:1565143 PMID:1565144 PMID:1591732 PMID:1631137 PMID:1683921 PMID:1975675 PMID:1978757 PMID:1999338 PMID:2046748 PMID:2932480 PMID:4122735 PMID:7565304 PMID:7732013 PMID:7783166 PMID:7887414 PMID:8023157 PMID:8062826 PMID:8118819 PMID:8164043 PMID:8242752 PMID:8401536 PMID:8423216 PMID:8425176 PMID:8479749 PMID:8550239 PMID:8633021 PMID:8718514 PMID:8825920 PMID:9047394 PMID:9218725 PMID:9242456 PMID:9364015 PMID:9399838 PMID:9546439 PMID:9582268 PMID:9607760 PMID:9627118 PMID:9662334 PMID:9667734 PMID:9704930 PMID:9704931 PMID:9891044 PMID:10229196 PMID:10411893 PMID:10432928 PMID:10486318 PMID:10519380 PMID:10589545 PMID:10797439 PMID:10802655 PMID:10864200 PMID:10922393 PMID:11139324 PMID:11180592 PMID:11370630 PMID:11403041 PMID:11479205 PMID:11481490 PMID:11521785 PMID:11600572 PMID:11753428 PMID:11782540 PMID:12007217 PMID:12019170 PMID:12085209 PMID:12567188 PMID:12619118 PMID:12672316 PMID:12826609 PMID:12885464 PMID:12917626 PMID:14743206 PMID:15037740 PMID:15121773 PMID:15355915 PMID:15381368 PMID:15390294 PMID:15607980 PMID:15607981 PMID:15722483 PMID:15741269 PMID:15781620 PMID:15925506 PMID:15951970 PMID:15977174 PMID:16033918 PMID:16199549 PMID:16258005 PMID:16401470 PMID:16489069 PMID:16494995 PMID:16551709 PMID:16682957 PMID:16750598 PMID:16818505 PMID:16861262 PMID:16933305 PMID:16964264 PMID:16969106 PMID:17015838 PMID:17308077 PMID:17311302 PMID:17535973 PMID:17540308 PMID:17567834 PMID:17599946 PMID:17606709 PMID:17636407 PMID:17638920 PMID:17940213 PMID:18248785 PMID:18270399 PMID:18307025 PMID:18373486 PMID:18511570 PMID:18685109 PMID:18940924 PMID:19046423 PMID:19101993 PMID:19127115 PMID:19367569 PMID:19454241 PMID:19521721 PMID:19556618 PMID:19711436 PMID:19714490 PMID:19717094 PMID:19877175 PMID:19881536 PMID:20028212 PMID:20113312 PMID:20127978 PMID:20128691 PMID:20301488 PMID:20407015 PMID:20436704 PMID:20455025 PMID:20516128 PMID:20520810 PMID:20522432 PMID:20586629 PMID:20593220 PMID:20689556 PMID:20693561 PMID:20805372 PMID:21118481 PMID:21187651 PMID:21192060 PMID:21232794 PMID:21305319 PMID:21343334 PMID:21356188 PMID:21440489 PMID:21445056 PMID:21445348 PMID:21464421 PMID:21468523 PMID:21484931 PMID:21519010 PMID:21535297 PMID:21552135 PMID:21601526 PMID:21619694 PMID:21630152 PMID:21665182 PMID:21665242 PMID:21672450 PMID:21761402 PMID:22004116 PMID:22006311 PMID:22110706 PMID:22186996 PMID:22233476 PMID:22455664 PMID:22619358 PMID:22703879 PMID:22729912 PMID:22744426 PMID:22811390 PMID:22822097 PMID:22869713 PMID:22887876 PMID:22915647 PMID:22923379 PMID:23031740 PMID:23056559 PMID:23161690 PMID:23172776 PMID:23175693 PMID:23246812 PMID:23259501 PMID:23263379 PMID:23469205 PMID:23484829 PMID:23538418 PMID:23570263 PMID:23624782 PMID:23630318 PMID:23639312 PMID:23733769 PMID:23792586 PMID:23794094 PMID:23887774 PMID:23894400 PMID:24033266 PMID:24065105 PMID:24076587 PMID:24122735 PMID:24382691 PMID:24501221 PMID:24573247 PMID:24590827 PMID:24651012 PMID:24677579 PMID:24702488 PMID:24728327 PMID:24764719 PMID:24810334 PMID:24835218 PMID:24884479 PMID:24936644 PMID:25059482 PMID:25256166 PMID:25326637 PMID:25404506 PMID:25584008 PMID:25612911 PMID:25736369 PMID:25741868 PMID:25765855 PMID:25773284 PMID:25787918 PMID:25896519 PMID:25945745 PMID:25952993 PMID:26014290 PMID:26205489 PMID:26225655 PMID:26230955 PMID:26332594 PMID:26425688 PMID:26452166 PMID:26467025 PMID:26572807 PMID:26580448 PMID:26585234 PMID:26681051 PMID:26681312 PMID:26681682 PMID:26718964 PMID:26786923 PMID:26822237 PMID:26845104 PMID:26911350 PMID:27022024 PMID:27081505 PMID:27101110 PMID:27146902 PMID:27153395 PMID:27189670 PMID:27223487 PMID:27276561 PMID:27328919 PMID:27374712 PMID:27463065 PMID:27501770 PMID:27516001 PMID:27601191 PMID:27621308 PMID:27663983 PMID:27680515 PMID:27683180 PMID:27714481 PMID:27895058 PMID:27959731 PMID:27993330 PMID:28152038 PMID:28154273 PMID:28279309 PMID:28349240 PMID:28369373 PMID:28387921 PMID:28453743 PMID:28453760 PMID:28472496 PMID:28492532 PMID:28573494 PMID:28664506 PMID:28724667 PMID:28756477 PMID:28861920 PMID:28864397 PMID:28873162 PMID:28968711 PMID:28975465 PMID:28984303 PMID:29070607 PMID:29300620 PMID:29324801 PMID:29392648 PMID:29478780 PMID:29489754 PMID:29522266 PMID:29922827 PMID:29956451 PMID:29979965 PMID:30042151 PMID:30076369 PMID:30092803 PMID:30107858 PMID:30147334 PMID:30224644 PMID:30287823 PMID:30327374 PMID:30352134 PMID:30588330 PMID:30596752 PMID:30816478 PMID:30840781 PMID:30982232 PMID:31081129 PMID:31105275 PMID:31321604 PMID:31494577 PMID:31567591 PMID:31742824 PMID:31744167 PMID:31748977 PMID:31775759 PMID:31882575 PMID:31978118 PMID:31983162 PMID:32000721 PMID:32039725 PMID:32156018 PMID:32292755 PMID:32427313 PMID:32475984 PMID:32592449 PMID:32658383 PMID:32671623 PMID:32817165 PMID:32832836 PMID:32888145 PMID:32906206 PMID:32986223 PMID:33087929 PMID:33163847 PMID:33245408 PMID:33257846 PMID:33258288 PMID:33300245 PMID:33372952 PMID:33471991 PMID:33603772 PMID:33637564 PMID:33840814 PMID:34088725 PMID:34240179 PMID:34299313 PMID:34503094 PMID:34529667 PMID:34540492 PMID:34670578 PMID:34709361 PMID:34885220 PMID:35043155 PMID:35367578 PMID:35802772 PMID:35974385 PMID:36003761 PMID:36008825 PMID:36309086 PMID:36329109 PMID:36988593 More...
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NCBI chrNW_004936595:919,807...935,367
Ensembl chrNW_004936595:919,428...925,425
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G |
Tsc2 |
TSC complex subunit 2 |
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ISO |
ClinVar Annotator: match by term: Bone osteosarcoma |
ClinVar |
PMID:25741868 PMID:26822237 |
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NCBI chrNW_004936694:1,958,152...1,993,373
Ensembl chrNW_004936694:1,958,154...1,993,363
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G |
Eef2 |
eukaryotic translation elongation factor 2 |
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ISO |
protein:increased expression:brain (human) |
RGD |
PMID:24589652 |
RGD:153297816 |
NCBI chrNW_004936588:2,259,236...2,267,692
Ensembl chrNW_004936588:2,258,309...2,266,609
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G |
Ncam1 |
neural cell adhesion molecule 1 |
disease_progression |
ISO |
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RGD |
PMID:20219118 |
RGD:40924672 |
NCBI chrNW_004936612:1,262,557...1,556,281
Ensembl chrNW_004936612:1,262,544...1,556,016
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G |
Sufu |
SUFU negative regulator of hedgehog signaling |
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ISO |
human, rat, and/or mouse glioma cells in a mouse model |
RGD |
PMID:30790292 |
RGD:150573813 |
NCBI chrNW_004936600:3,270,662...3,381,722
Ensembl chrNW_004936600:3,268,260...3,381,781
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G |
Bax |
BCL2 associated X, apoptosis regulator |
treatment |
ISO |
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RGD |
PMID:27255231 PMID:29324390 |
RGD:13792502 RGD:13792598 |
NCBI chrNW_004936664:2,968,103...2,973,652
Ensembl chrNW_004936664:2,967,865...2,973,820
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Bcl2 |
BCL2 apoptosis regulator |
treatment |
ISO |
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RGD |
PMID:27255231 PMID:29324390 |
RGD:13792502 RGD:13792598 |
NCBI chrNW_004936497:2,209,136...2,373,580
Ensembl chrNW_004936497:2,210,334...2,210,921
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G |
Birc3 |
baculoviral IAP repeat containing 3 |
exacerbates |
ISO |
mRNA:increased expression:brain (human) |
RGD |
PMID:31964418 |
RGD:153344516 |
NCBI chrNW_004936551:5,544,047...5,556,550
Ensembl chrNW_004936551:5,544,065...5,556,555
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G |
Birc5 |
baculoviral IAP repeat containing 5 |
exacerbates |
ISO |
mRNA:increased expression:brain (human) |
RGD |
PMID:31964418 |
RGD:153344516 |
NCBI chrNW_004936594:2,812,165...2,820,618
Ensembl chrNW_004936594:2,812,238...2,820,636
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G |
Casp3 |
caspase 3 |
treatment |
ISO |
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RGD |
PMID:29324390 |
RGD:13792598 |
NCBI chrNW_004936554:4,571,072...4,593,765
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G |
Ccdc194 |
coiled-coil domain containing 194 |
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ISO |
mRNA,protein:increased expression:brain: |
RGD |
PMID:21565182 |
RGD:14398497 |
NCBI chrNW_004936596:3,492,733...3,501,347
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G |
Fadd |
Fas associated via death domain |
treatment |
ISO |
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RGD |
PMID:27255231 |
RGD:13792502 |
NCBI chrNW_004936599:633,501...639,412
Ensembl chrNW_004936599:633,330...639,456
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G |
Fas |
Fas cell surface death receptor |
treatment |
ISO |
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RGD |
PMID:29324390 |
RGD:13792598 |
NCBI chrNW_004936735:209,369...234,582
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G |
Faslg |
Fas ligand |
treatment |
ISO |
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RGD |
PMID:29324390 |
RGD:13792598 |
NCBI chrNW_004936481:14,789,547...14,795,780
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G |
Foxa1 |
forkhead box A1 |
disease_progression |
ISO |
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RGD |
PMID:23510544 |
RGD:151665742 |
NCBI chrNW_004936494:11,529,546...11,535,224
Ensembl chrNW_004936494:11,529,546...11,535,224
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Gapdh |
glyceraldehyde-3-phosphate dehydrogenase |
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ISO |
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RGD |
PMID:26032618 |
RGD:13792685 |
NCBI chrNW_004936709:1,243,149...1,247,782
Ensembl chrNW_004936709:1,243,147...1,247,903
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G |
Kdr |
kinase insert domain receptor |
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ISO |
protein:increased expression:brain (human) |
RGD |
PMID:33900414 |
RGD:151660356 |
NCBI chrNW_004936482:17,537,697...17,581,320
Ensembl chrNW_004936482:17,538,864...17,581,002
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Naip |
NLR family apoptosis inhibitory protein |
exacerbates |
ISO |
mRNA:increased expression:brain (human) |
RGD |
PMID:31964418 |
RGD:153344516 |
NCBI chrNW_004936549:5,000,526...5,069,110
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G |
Ptprb |
protein tyrosine phosphatase receptor type B |
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ISO |
human cell in mouse model protein:increased expression:brain (human) |
RGD |
PMID:16923162 PMID:33900414 |
RGD:151660356 RGD:151660368 |
NCBI chrNW_004936545:8,150,766...8,235,674
Ensembl chrNW_004936545:8,147,291...8,235,715
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G |
Vegfa |
vascular endothelial growth factor A |
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ISO |
protein:increased expression:brain (human) |
RGD |
PMID:33900414 |
RGD:151660356 |
NCBI chrNW_004936476:16,245,134...16,261,180
Ensembl chrNW_004936476:16,247,100...16,260,673
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G |
Xrcc1 |
X-ray repair cross complementing 1 |
susceptibility |
ISO |
DNA:SNP:exon 10: p.R399Q (human) |
RGD |
PMID:18330515 |
RGD:401827274 |
NCBI chrNW_004936706:752,571...783,746
Ensembl chrNW_004936706:751,108...783,777
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G |
Xrcc3 |
X-ray repair cross complementing 3 |
susceptibility |
ISO |
DNA:SNP:exon 8: p.T241M (rs861539) (Human) |
RGD |
PMID:18330515 |
RGD:401827274 |
NCBI chrNW_004936621:1,462,441...1,474,937
Ensembl chrNW_004936621:1,462,428...1,473,868
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G |
Pax3 |
paired box 3 |
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ISO |
mRNA,protein:increased expression:brain stem: |
RGD |
PMID:25330836 |
RGD:13702891 |
NCBI chrNW_004936569:4,215,513...4,307,815
Ensembl chrNW_004936569:4,216,900...4,307,815
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Pdgfra |
platelet derived growth factor receptor alpha |
severity |
ISO |
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RGD |
PMID:20197468 |
RGD:13702892 |
NCBI chrNW_004936482:16,804,129...16,853,539
Ensembl chrNW_004936482:16,807,569...16,853,587
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G |
Msh6 |
mutS homolog 6 |
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ISO |
ClinVar Annotator: match by term: Cerebellar medulloblastoma |
ClinVar |
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NCBI chrNW_004936508:4,708,661...4,728,671
Ensembl chrNW_004936508:4,708,661...4,728,787
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G |
Rtel1 |
regulator of telomere elongation helicase 1 |
ameliorates susceptibility |
ISO |
DNA:SNP:cds:rs6089953|rs6010620|rs2297440 (human) DNA:SNP:cds:rs4809324 (human) |
RGD |
PMID:26014354 |
RGD:152985535 |
NCBI chrNW_004936514:10,920,979...10,954,483
Ensembl chrNW_004936514:10,922,322...10,954,402
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G |
Mapk1 |
mitogen-activated protein kinase 1 |
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ISO |
protein:increased expression:brain: |
RGD |
PMID:21466243 |
RGD:13702864 |
NCBI chrNW_004936619:1,889,841...1,932,646
Ensembl chrNW_004936619:1,889,708...1,932,646
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Chi3l1 |
chitinase 3 like 1 |
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ISO |
mRNA:increased expression:tumor (human) |
RGD |
PMID:12598313 |
RGD:4892624 |
NCBI chrNW_004936567:1,411,080...1,418,332
Ensembl chrNW_004936567:1,411,037...1,418,801
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Col2a1 |
collagen type II alpha 1 chain |
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ISO |
DNA:mutations:multiple (human) CTD Direct Evidence: marker/mechanism |
RGD CTD |
PMID:23770606 |
RGD:8657387 |
NCBI chrNW_004936512:5,861,933...5,894,898
Ensembl chrNW_004936512:5,861,933...5,892,853
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Ext1 |
exostosin glycosyltransferase 1 |
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ISO |
ClinVar Annotator: match by term: Chondrosarcoma | ClinVar Annotator: match by term: Chondrosarcoma, somatic |
OMIM ClinVar |
PMID:7550340 PMID:8981950 PMID:9521425 PMID:10679937 PMID:10713884 PMID:11170095 PMID:11391482 PMID:15586175 PMID:16088908 PMID:17301954 PMID:18165274 PMID:19810120 PMID:23262345 PMID:23439489 PMID:24728327 PMID:25230886 PMID:25468659 PMID:25541963 PMID:25727835 PMID:25741868 PMID:28492532 PMID:29126381 More...
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NCBI chrNW_004936470:28,303,213...28,566,470
Ensembl chrNW_004936470:28,303,828...28,566,118
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Fgfr3 |
fibroblast growth factor receptor 3 |
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ISO |
protein:increased expression:growth plate |
RGD |
PMID:17907424 |
RGD:11568634 |
NCBI chrNW_004936477:21,591,772...21,606,289
Ensembl chrNW_004936477:21,591,792...21,606,296
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Mtor |
mechanistic target of rapamycin kinase |
disease_progression |
ISO |
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RGD |
PMID:22761648 |
RGD:10040952 |
NCBI chrNW_004936474:158,376...282,310
Ensembl chrNW_004936474:157,590...282,342
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Taf15 |
TATA-box binding protein associated factor 15 |
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ISO |
extraskeletal myxoid chondrosarcomas (EMC) |
RGD |
PMID:10602519 |
RGD:1599281 |
NCBI chrNW_004936490:199,226...230,190
Ensembl chrNW_004936490:199,201...230,244
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Prkca |
protein kinase C alpha |
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ISO |
DNA:mutation:cds:c.1387G>C,p.D463H(human) |
RGD |
PMID:29476136 |
RGD:13782058 |
NCBI chrNW_004936541:6,231,604...6,488,201
Ensembl chrNW_004936541:6,233,110...6,488,052
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Brca2 |
BRCA2 DNA repair associated |
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ISO |
ClinVar Annotator: match by term: Chordoma |
ClinVar |
PMID:186727 PMID:10923033 PMID:11304778 PMID:11873550 PMID:11920621 PMID:12100744 PMID:12161607 PMID:12228710 PMID:12442265 PMID:12442273 PMID:12774040 PMID:15172753 PMID:15645491 PMID:15800311 PMID:15944772 PMID:16205630 PMID:16683254 PMID:17018160 PMID:17924331 PMID:17997147 PMID:18256760 PMID:18451181 PMID:19043619 PMID:19200354 PMID:19563646 PMID:19656415 PMID:20104584 PMID:21120943 PMID:21520333 PMID:21638052 PMID:21702907 PMID:21719596 PMID:21952622 PMID:21990134 PMID:22194698 PMID:22366370 PMID:22476429 PMID:22703879 PMID:22798144 PMID:22811390 PMID:23108138 PMID:24212087 PMID:24249303 PMID:24259538 PMID:24323938 PMID:24448499 PMID:24489791 PMID:24504028 PMID:24556621 PMID:24728189 PMID:24728327 PMID:25447315 PMID:25682074 PMID:25741868 PMID:25782689 PMID:25863477 PMID:25948282 PMID:26109977 PMID:26145171 PMID:26287763 PMID:26467025 PMID:26681312 PMID:27062684 PMID:27153395 PMID:27376475 PMID:27616075 PMID:28492532 PMID:29348823 PMID:29394989 PMID:29446198 PMID:29785135 PMID:29884841 PMID:29988080 PMID:30032850 PMID:30287823 PMID:30309222 PMID:30447919 PMID:30702160 PMID:31060523 PMID:31131967 PMID:31214711 PMID:31409081 PMID:31742824 PMID:31843900 PMID:31911673 PMID:32885271 PMID:33293522 PMID:33372952 PMID:33471991 PMID:33609447 PMID:34178674 PMID:34350294 PMID:34970085 PMID:35736817 PMID:35762214 PMID:36721989 PMID:36988593 PMID:37922907 More...
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NCBI chrNW_004936472:26,945,659...27,017,693
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Palb2 |
partner and localizer of BRCA2 |
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ISO |
ClinVar Annotator: match by term: Chordoma |
ClinVar |
PMID:25085752 PMID:25741868 PMID:26283626 PMID:26315354 PMID:27106063 PMID:27443514 PMID:28492532 PMID:28779002 PMID:29522266 PMID:30303537 PMID:30680046 PMID:31636395 PMID:32546565 PMID:33471991 PMID:34284872 PMID:35762214 More...
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NCBI chrNW_004936501:8,246,927...8,273,258
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G |
Tbxt |
T-box transcription factor T |
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ISO |
CTD Direct Evidence: marker/mechanism |
CTD |
PMID:19801981 PMID:23064415 |
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NCBI chrNW_004936489:16,027,359...16,035,041
Ensembl chrNW_004936489:16,027,359...16,035,041
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G |
Acod1 |
aconitate decarboxylase 1 |
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ISO |
ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome |
ClinVar |
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NCBI chrNW_004936511:4,322,198...4,326,562
Ensembl chrNW_004936511:4,322,198...4,329,686
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Alg11 |
ALG11 alpha-1,2-mannosyltransferase |
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ISO |
ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome |
ClinVar |
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NCBI chrNW_004936565:4,763,894...4,775,360
Ensembl chrNW_004936565:4,763,779...4,778,250
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Arl11 |
ARF like GTPase 11 |
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ISO |
ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome |
ClinVar |
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NCBI chrNW_004936565:2,686,783...2,687,377
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Atp7b |
ATPase copper transporting beta |
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ISO |
ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome |
ClinVar |
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NCBI chrNW_004936565:4,694,294...4,763,661
Ensembl chrNW_004936565:4,694,281...4,763,773
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Bora |
BORA aurora kinase A activator |
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ISO |
ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome |
ClinVar |
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NCBI chrNW_004936511:8,107,476...8,134,677
Ensembl chrNW_004936511:8,107,756...8,134,683
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G |
Cab39l |
calcium binding protein 39 like |
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ISO |
ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome |
ClinVar |
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NCBI chrNW_004936565:2,415,225...2,536,311
Ensembl chrNW_004936565:2,417,309...2,472,189
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Cdadc1 |
cytidine and dCMP deaminase domain containing 1 |
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ISO |
ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome |
ClinVar |
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NCBI chrNW_004936565:2,336,613...2,395,816
Ensembl chrNW_004936565:2,336,744...2,387,195
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G |
Ckap2 |
cytoskeleton associated protein 2 |
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ISO |
ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome |
ClinVar |
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NCBI chrNW_004936565:4,872,142...4,896,449
Ensembl chrNW_004936565:4,871,414...4,881,597
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G |
Cln5 |
CLN5 intracellular trafficking protein |
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ISO |
ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome |
ClinVar |
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NCBI chrNW_004936511:4,283,016...4,291,968
Ensembl chrNW_004936511:4,283,009...4,292,376
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G |
Cnmd |
chondromodulin |
|
ISO |
ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome |
ClinVar |
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NCBI chrNW_004936667:599,703...624,821
Ensembl chrNW_004936667:599,711...624,999
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G |
Commd6 |
COMM domain containing 6 |
|
ISO |
ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome |
ClinVar |
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NCBI chrNW_004936511:5,591,851...5,596,998
Ensembl chrNW_004936511:5,591,848...5,600,270
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G |
CUNH13orf42 |
chromosome unknown C13orf42 homolog |
|
ISO |
ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome |
ClinVar |
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NCBI chrNW_004936565:3,936,666...3,964,309
Ensembl chrNW_004936565:3,936,666...3,964,309
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G |
Cysltr2 |
cysteinyl leukotriene receptor 2 |
|
ISO |
ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome |
ClinVar |
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NCBI chrNW_004936565:1,917,970...1,919,027
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G |
Dach1 |
dachshund family transcription factor 1 |
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ISO |
ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome |
ClinVar |
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NCBI chrNW_004936511:8,899,245...9,253,024
Ensembl chrNW_004936511:9,061,676...9,253,486
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G |
Diaph3 |
diaphanous related formin 3 |
|
ISO |
ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome |
ClinVar |
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NCBI chrNW_004936705:1,381,025...1,833,890
Ensembl chrNW_004936705:1,380,445...1,731,280
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G |
Dis3 |
DIS3 homolog, exosome endoribonuclease and 3'-5' exoribonuclease |
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ISO |
ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome |
ClinVar |
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NCBI chrNW_004936511:8,082,909...8,105,203
Ensembl chrNW_004936511:8,082,406...8,108,233
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G |
Dleu7 |
deleted in lymphocytic leukemia 7 |
|
ISO |
ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome |
ClinVar |
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NCBI chrNW_004936565:3,706,566...3,722,689
Ensembl chrNW_004936565:3,706,538...3,722,802
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G |
Ebpl |
EBP like |
|
ISO |
ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome |
ClinVar |
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NCBI chrNW_004936565:2,706,788...2,731,453
Ensembl chrNW_004936565:2,706,788...2,731,453
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G |
Ednrb |
endothelin receptor type B |
|
ISO |
ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome |
ClinVar |
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NCBI chrNW_004936511:3,446,864...3,478,434
Ensembl chrNW_004936511:3,446,839...3,478,434
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G |
Fam124a |
family with sequence similarity 124 member A |
|
ISO |
ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome |
ClinVar |
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NCBI chrNW_004936565:4,058,280...4,106,803
Ensembl chrNW_004936565:4,080,867...4,105,740
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G |
Fbxl3 |
F-box and leucine rich repeat protein 3 |
|
ISO |
ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome |
ClinVar |
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NCBI chrNW_004936511:4,259,066...4,280,501
Ensembl chrNW_004936511:4,258,548...4,283,285
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G |
Fndc3a |
fibronectin type III domain containing 3A |
|
ISO |
ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome |
ClinVar |
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NCBI chrNW_004936565:2,154,672...2,312,670
Ensembl chrNW_004936565:2,154,599...2,312,862
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G |
Ints6 |
integrator complex subunit 6 |
|
ISO |
ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome |
ClinVar |
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NCBI chrNW_004936565:4,198,659...4,282,443
Ensembl chrNW_004936565:4,199,195...4,282,443
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G |
Itm2b |
integral membrane protein 2B |
|
ISO |
ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome |
ClinVar |
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NCBI chrNW_004936565:1,535,570...1,557,667
Ensembl chrNW_004936565:1,535,779...1,557,013
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G |
Kcnrg |
potassium channel regulator |
|
ISO |
ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome |
ClinVar |
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NCBI chrNW_004936565:2,991,568...2,997,592
Ensembl chrNW_004936565:2,991,410...2,997,557
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G |
Kctd12 |
potassium channel tetramerization domain containing 12 |
|
ISO |
ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome |
ClinVar |
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NCBI chrNW_004936511:4,389,558...4,395,630
Ensembl chrNW_004936511:4,389,755...4,390,738
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G |
Klf12 |
KLF transcription factor 12 |
|
ISO |
ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome |
ClinVar |
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NCBI chrNW_004936511:6,992,131...7,292,484
Ensembl chrNW_004936511:6,854,995...7,283,347
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G |
Klf5 |
KLF transcription factor 5 |
|
ISO |
ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome |
ClinVar |
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NCBI chrNW_004936511:7,806,714...7,824,833
Ensembl chrNW_004936511:7,806,708...7,824,992
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G |
Klhl1 |
kelch like family member 1 |
|
ISO |
ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome |
ClinVar |
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NCBI chrNW_004936511:10,511,200...10,879,121
Ensembl chrNW_004936511:10,511,192...10,879,146
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G |
Kpna3 |
karyopherin subunit alpha 3 |
|
ISO |
ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome |
ClinVar |
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NCBI chrNW_004936565:2,738,003...2,775,814
Ensembl chrNW_004936565:2,737,218...2,775,798
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G |
Lmo7 |
LIM domain 7 |
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ISO |
ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome |
ClinVar |
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NCBI chrNW_004936511:5,292,737...5,501,374
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G |
LOC101972150 |
protocadherin-8 |
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ISO |
ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome |
ClinVar |
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NCBI chrNW_004936667:716,802...721,441
Ensembl chrNW_004936667:716,625...721,503
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G |
LOC101978403 |
histone-lysine N-methyltransferase SETDB2 |
|
ISO |
ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome |
ClinVar |
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NCBI chrNW_004936565:2,536,623...2,607,824
Ensembl chrNW_004936565:2,591,305...2,606,130 Ensembl chrNW_004936565:2,591,305...2,606,130
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G |
Lpar6 |
lysophosphatidic acid receptor 6 |
|
ISO |
ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome |
ClinVar |
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NCBI chrNW_004936565:1,688,218...1,689,876
Ensembl chrNW_004936565:1,688,314...1,689,348
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G |
Med4 |
mediator complex subunit 4 |
|
ISO |
ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome |
ClinVar |
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NCBI chrNW_004936565:1,397,434...1,414,674
Ensembl chrNW_004936565:1,396,088...1,415,248
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G |
Mlnr |
motilin receptor |
|
ISO |
ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome |
ClinVar |
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NCBI chrNW_004936565:2,321,799...2,326,871
Ensembl chrNW_004936565:2,323,966...2,328,535
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G |
Mycbp2 |
MYC binding protein 2 |
|
ISO |
ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome |
ClinVar |
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NCBI chrNW_004936511:3,977,950...4,248,959
Ensembl chrNW_004936511:3,978,246...4,249,234
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G |
Mzt1 |
mitotic spindle organizing protein 1 |
|
ISO |
ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome |
ClinVar |
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NCBI chrNW_004936511:8,134,607...8,149,923
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G |
Ndfip2 |
Nedd4 family interacting protein 2 |
|
ISO |
ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome |
ClinVar |
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NCBI chrNW_004936511:2,063,630...2,123,214
Ensembl chrNW_004936511:2,063,144...2,124,037
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G |
Nek3 |
NIMA related kinase 3 |
|
ISO |
ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome |
ClinVar |
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NCBI chrNW_004936565:4,840,416...4,863,349
Ensembl chrNW_004936565:4,840,894...4,863,301
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G |
Nek5 |
NIMA related kinase 5 |
|
ISO |
ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome |
ClinVar |
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NCBI chrNW_004936565:4,779,843...4,836,093
Ensembl chrNW_004936565:4,779,933...4,836,093
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G |
Nudt15 |
nudix hydrolase 15 |
|
ISO |
ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome |
ClinVar |
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NCBI chrNW_004936565:1,380,981...1,389,908
Ensembl chrNW_004936565:1,381,655...1,389,048
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G |
Obi1 |
ORC ubiquitin ligase 1 |
|
ISO |
ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome |
ClinVar |
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NCBI chrNW_004936511:2,800,466...2,847,896
Ensembl chrNW_004936511:2,800,425...2,848,628
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G |
Olfm4 |
olfactomedin 4 |
|
ISO |
ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome |
ClinVar |
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NCBI chrNW_004936667:905,556...923,105
Ensembl chrNW_004936667:907,473...922,291
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G |
Pcdh17 |
protocadherin 17 |
|
ISO |
ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome |
ClinVar |
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NCBI chrNW_004936820:764,016...860,325
Ensembl chrNW_004936820:765,100...861,667
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G |
Pcdh20 |
protocadherin 20 |
|
ISO |
ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome |
ClinVar |
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NCBI chrNW_004936705:326,349...332,242
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G |
Pcdh9 |
protocadherin 9 |
|
ISO |
ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome |
ClinVar |
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NCBI chrNW_004936553:424,425...971,388
Ensembl chrNW_004936553:424,988...1,272,450
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G |
Pibf1 |
progesterone immunomodulatory binding factor 1 |
|
ISO |
ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome |
ClinVar |
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NCBI chrNW_004936511:7,860,552...8,082,850
Ensembl chrNW_004936511:7,860,590...8,081,525
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G |
Pou4f1 |
POU class 4 homeobox 1 |
|
ISO |
ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome |
ClinVar |
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NCBI chrNW_004936511:2,857,017...2,859,705
Ensembl chrNW_004936511:2,857,331...2,859,277
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G |
Rb1 |
RB transcriptional corepressor 1 |
|
ISO |
ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome |
ClinVar |
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NCBI chrNW_004936565:1,596,227...1,746,706
Ensembl chrNW_004936565:1,597,593...1,746,846
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G |
Rbm26 |
RNA binding motif protein 26 |
|
ISO |
ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome |
ClinVar |
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NCBI chrNW_004936511:2,175,192...2,252,955
Ensembl chrNW_004936511:2,175,374...2,249,195
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G |
Rcbtb1 |
RCC1 and BTB domain containing protein 1 |
|
ISO |
ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome |
ClinVar |
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NCBI chrNW_004936565:2,608,788...2,649,992
Ensembl chrNW_004936565:2,608,792...2,650,604
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G |
Rcbtb2 |
RCC1 and BTB domain containing protein 2 |
|
ISO |
ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome |
ClinVar |
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NCBI chrNW_004936565:1,750,565...1,789,779
Ensembl chrNW_004936565:1,750,105...1,789,737
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G |
Rnaseh2b |
ribonuclease H2 subunit B |
|
ISO |
ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome |
ClinVar |
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NCBI chrNW_004936565:3,791,305...3,839,991
Ensembl chrNW_004936565:3,791,329...3,840,016
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G |
Scel |
sciellin |
|
ISO |
ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome |
ClinVar |
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NCBI chrNW_004936511:3,696,150...3,794,031
Ensembl chrNW_004936511:3,694,543...3,794,086
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G |
Serpine3 |
serpin family E member 3 |
|
ISO |
ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome |
ClinVar |
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NCBI chrNW_004936565:4,167,734...4,198,573
Ensembl chrNW_004936565:4,168,895...4,197,662
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G |
Slain1 |
SLAIN motif family member 1 |
|
ISO |
ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome |
ClinVar |
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NCBI chrNW_004936511:3,615,251...3,671,429
Ensembl chrNW_004936511:3,614,303...3,671,847
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G |
Slitrk1 |
SLIT and NTRK like family member 1 |
|
ISO |
ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome |
ClinVar |
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NCBI chrNW_004936696:1,447,644...1,452,612
Ensembl chrNW_004936696:1,449,687...1,451,777
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G |
Slitrk6 |
SLIT and NTRK like family member 6 |
|
ISO |
ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome |
ClinVar |
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NCBI chrNW_004936866:412,719...419,381
Ensembl chrNW_004936866:412,818...419,381
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G |
Spry2 |
sprouty RTK signaling antagonist 2 |
|
ISO |
ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome |
ClinVar |
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NCBI chrNW_004936511:1,452,421...1,458,031
Ensembl chrNW_004936511:1,452,807...1,458,031
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G |
Spryd7 |
SPRY domain containing 7 |
|
ISO |
ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome |
ClinVar |
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NCBI chrNW_004936565:2,911,523...2,939,151
Ensembl chrNW_004936565:2,908,169...2,939,232
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G |
Sucla2 |
succinate-CoA ligase ADP-forming subunit beta |
|
ISO |
ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome |
ClinVar |
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NCBI chrNW_004936565:1,313,150...1,355,693
Ensembl chrNW_004936565:1,313,150...1,355,693
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G |
Sugt1 |
SGT1 homolog, MIS12 kinetochore complex assembly cochaperone |
|
ISO |
ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome |
ClinVar |
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NCBI chrNW_004936667:556,555...588,585
Ensembl chrNW_004936667:556,533...588,160
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G |
Tbc1d4 |
TBC1 domain family member 4 |
|
ISO |
ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome |
ClinVar |
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NCBI chrNW_004936511:5,789,683...5,858,930
Ensembl chrNW_004936511:5,673,368...5,856,631
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G |
Tdrd3 |
tudor domain containing 3 |
|
ISO |
ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome |
ClinVar |
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NCBI chrNW_004936511:11,258,898...11,348,522
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G |
Thsd1 |
thrombospondin type 1 domain containing 1 |
|
ISO |
ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome |
ClinVar |
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NCBI chrNW_004936565:4,925,400...4,952,210
Ensembl chrNW_004936565:4,925,237...4,954,054
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G |
Tmem272 |
transmembrane protein 272 |
|
ISO |
ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome |
ClinVar |
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G |
Trim13 |
tripartite motif containing 13 |
|
ISO |
ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome |
ClinVar |
|
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NCBI chrNW_004936565:2,976,681...2,989,036
Ensembl chrNW_004936565:2,976,729...2,989,088
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G |
Uchl3 |
ubiquitin C-terminal hydrolase L3 |
|
ISO |
ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome |
ClinVar |
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NCBI chrNW_004936511:5,524,425...5,581,156
Ensembl chrNW_004936511:5,522,965...5,581,334
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G |
Vps36 |
vacuolar protein sorting 36 homolog |
|
ISO |
ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome |
ClinVar |
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NCBI chrNW_004936565:4,898,969...4,921,411
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G |
Wdfy2 |
WD repeat and FYVE domain containing 2 |
|
ISO |
ClinVar Annotator: match by term: Chromosome 13q14 deletion syndrome |
ClinVar |
|
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NCBI chrNW_004936565:4,375,012...4,527,259
Ensembl chrNW_004936565:4,375,462...4,520,691
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G |
Sufu |
SUFU negative regulator of hedgehog signaling |
|
ISO |
ClinVar Annotator: match by term: Congenital fibrosarcoma |
ClinVar |
|
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NCBI chrNW_004936600:3,270,662...3,381,722
Ensembl chrNW_004936600:3,268,260...3,381,781
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G |
Tp53 |
tumor protein p53 |
|
ISO |
ClinVar Annotator: match by term: Infantile fibrosarcoma |
ClinVar |
PMID:1631137 PMID:1978757 PMID:8062826 PMID:8099841 PMID:8425176 PMID:8527048 PMID:9150393 PMID:9242456 PMID:9598730 PMID:9825943 PMID:10089074 PMID:11051239 PMID:11782540 PMID:12826609 PMID:14743206 PMID:16818505 PMID:17417627 PMID:17427234 PMID:17606709 PMID:17881637 PMID:19378321 PMID:20013323 PMID:20128691 PMID:20182602 PMID:20407015 PMID:20522432 PMID:21059199 PMID:21343334 PMID:21519010 PMID:21601526 PMID:22186996 PMID:22265402 PMID:22713868 PMID:22915647 PMID:22955915 PMID:23172776 PMID:23246812 PMID:23667202 PMID:23950206 PMID:24033266 PMID:24038938 PMID:24573247 PMID:24603336 PMID:24651015 PMID:25157968 PMID:25741868 PMID:25925845 PMID:25952993 PMID:26230955 PMID:26467025 PMID:26585234 PMID:26619011 PMID:26787237 PMID:27276561 PMID:27374712 PMID:27463065 PMID:27680515 PMID:27895058 PMID:27959731 PMID:28369373 PMID:28472496 PMID:28492532 PMID:28724667 PMID:29025599 PMID:29979965 PMID:30224644 PMID:30327374 PMID:31127191 PMID:31775759 PMID:32187361 PMID:33300245 PMID:36988593 More...
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NCBI chrNW_004936595:919,807...935,367
Ensembl chrNW_004936595:919,428...925,425
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G |
Col1a1 |
collagen type I alpha 1 chain |
|
ISO |
associated with Severe combined immunodeficiency due to adenosine deaminase deficiency;DNA:gene fusion DNA:gene fusion:exon |
RGD |
PMID:12641779 PMID:22153773 |
RGD:2292195 RGD:5688300 |
NCBI chrNW_004936490:11,448,552...11,465,836
Ensembl chrNW_004936490:11,448,654...11,464,444
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G |
Pdgfb |
platelet derived growth factor subunit B |
|
ISO |
ClinVar Annotator: match by term: Dermatofibrosarcoma protuberans |
ClinVar |
PMID:25741868 PMID:28492532 |
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NCBI chrNW_004936492:2,353,840...2,368,573
Ensembl chrNW_004936492:2,353,841...2,368,573
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G |
Actr1a |
actin related protein 1A |
|
ISO |
ClinVar Annotator: match by term: Desmoplastic/nodular medulloblastoma |
ClinVar |
PMID:12068298 |
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NCBI chrNW_004936600:3,384,466...3,402,312
Ensembl chrNW_004936600:3,384,423...3,402,304
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G |
Arid2 |
AT-rich interaction domain 2 |
|
ISO |
ClinVar Annotator: match by term: Desmoplastic/nodular medulloblastoma |
ClinVar |
PMID:26580448 |
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NCBI chrNW_004936512:4,020,303...4,199,390
Ensembl chrNW_004936512:4,020,966...4,196,459
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G |
Arl3 |
ARF like GTPase 3 |
|
ISO |
ClinVar Annotator: match by term: Desmoplastic/nodular medulloblastoma |
ClinVar |
PMID:12068298 |
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NCBI chrNW_004936600:3,190,212...3,229,831
Ensembl chrNW_004936600:3,190,208...3,232,755
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G |
As3mt |
arsenite methyltransferase |
|
ISO |
ClinVar Annotator: match by term: Desmoplastic/nodular medulloblastoma |
ClinVar |
PMID:12068298 |
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NCBI chrNW_004936600:3,050,946...3,069,786
Ensembl chrNW_004936600:3,051,129...3,069,690
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G |
Atp5mk |
ATP synthase membrane subunit k |
|
ISO |
ClinVar Annotator: match by term: Desmoplastic/nodular medulloblastoma |
ClinVar |
PMID:12068298 |
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NCBI chrNW_004936600:2,676,423...2,683,055
Ensembl chrNW_004936600:2,676,387...2,684,780
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G |
Borcs7 |
BLOC-1 related complex subunit 7 |
|
ISO |
ClinVar Annotator: match by term: Desmoplastic/nodular medulloblastoma |
ClinVar |
PMID:12068298 |
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NCBI chrNW_004936600:3,074,857...3,088,294
Ensembl chrNW_004936600:3,074,987...3,088,524
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G |
Calhm1 |
calcium homeostasis modulator 1 |
|
ISO |
ClinVar Annotator: match by term: Desmoplastic/nodular medulloblastoma |
ClinVar |
PMID:12068298 |
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NCBI chrNW_004936600:2,620,110...2,623,003
Ensembl chrNW_004936600:2,620,110...2,623,003
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G |
Calhm2 |
calcium homeostasis modulator family member 2 |
|
ISO |
ClinVar Annotator: match by term: Desmoplastic/nodular medulloblastoma |
ClinVar |
PMID:12068298 |
|
NCBI chrNW_004936600:2,625,601...2,631,211
Ensembl chrNW_004936600:2,625,552...2,632,479
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G |
Calhm3 |
calcium homeostasis modulator 3 |
|
ISO |
ClinVar Annotator: match by term: Desmoplastic/nodular medulloblastoma |
ClinVar |
PMID:12068298 |
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NCBI chrNW_004936600:2,603,852...2,607,624
Ensembl chrNW_004936600:2,600,804...2,607,732
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G |
Cfap43 |
cilia and flagella associated protein 43 |
|
ISO |
ClinVar Annotator: match by term: Desmoplastic/nodular medulloblastoma |
ClinVar |
PMID:12068298 |
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NCBI chrNW_004936600:1,954,987...2,042,834
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G |
Cfap58 |
cilia and flagella associated protein 58 |
|
ISO |
ClinVar Annotator: match by term: Desmoplastic/nodular medulloblastoma |
ClinVar |
PMID:12068298 |
|
NCBI chrNW_004936600:1,769,243...1,861,341
Ensembl chrNW_004936600:1,769,851...1,862,876
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G |
Cnnm2 |
cyclin and CBS domain divalent metal cation transport mediator 2 |
|
ISO |
ClinVar Annotator: match by term: Desmoplastic/nodular medulloblastoma |
ClinVar |
PMID:12068298 |
|
NCBI chrNW_004936600:2,898,321...3,037,414
Ensembl chrNW_004936600:2,904,410...3,036,132
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G |
Col17a1 |
collagen type XVII alpha 1 chain |
|
ISO |
ClinVar Annotator: match by term: Desmoplastic/nodular medulloblastoma |
ClinVar |
PMID:12068298 |
|
NCBI chrNW_004936600:2,084,854...2,133,028
Ensembl chrNW_004936600:2,091,150...2,132,173
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G |
Ctcf |
CCCTC-binding factor |
|
ISO |
ClinVar Annotator: match by term: Desmoplastic/nodular medulloblastoma |
ClinVar |
|
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NCBI chrNW_004936475:17,987,137...18,031,733
Ensembl chrNW_004936475:17,987,156...18,031,760
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G |
CUNH10orf95 |
chromosome unknown C10orf95 homolog |
|
ISO |
ClinVar Annotator: match by term: Desmoplastic/nodular medulloblastoma |
ClinVar |
PMID:12068298 |
|
NCBI chrNW_004936600:3,428,561...3,429,778
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G |
Gsto1 |
glutathione S-transferase omega 1 |
|
ISO |
ClinVar Annotator: match by term: Desmoplastic/nodular medulloblastoma |
ClinVar |
PMID:12068298 |
|
NCBI chrNW_004936600:1,932,152...1,943,342
Ensembl chrNW_004936600:1,930,695...1,943,422
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G |
Gsto2 |
glutathione S-transferase omega 2 |
|
ISO |
ClinVar Annotator: match by term: Desmoplastic/nodular medulloblastoma |
ClinVar |
PMID:12068298 |
|
NCBI chrNW_004936600:1,907,396...1,925,256
Ensembl chrNW_004936600:1,907,517...1,925,235
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G |
Ina |
internexin neuronal intermediate filament protein alpha |
|
ISO |
ClinVar Annotator: match by term: Desmoplastic/nodular medulloblastoma |
ClinVar |
PMID:12068298 |
|
NCBI chrNW_004936600:2,747,649...2,760,517
Ensembl chrNW_004936600:2,746,772...2,760,573
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G |
Itprip |
inositol 1,4,5-trisphosphate receptor interacting protein |
|
ISO |
ClinVar Annotator: match by term: Desmoplastic/nodular medulloblastoma |
ClinVar |
PMID:12068298 |
|
NCBI chrNW_004936600:1,874,696...1,898,033
Ensembl chrNW_004936600:1,895,714...1,897,384
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G |
LOC101961565 |
VPS10 domain-containing receptor SorCS3 |
|
ISO |
ClinVar Annotator: match by term: Desmoplastic/nodular medulloblastoma |
ClinVar |
PMID:12068298 |
|
NCBI chrNW_004936600:1,040,284...1,610,474
Ensembl chrNW_004936600:1,042,135...1,609,783
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G |
LOC101970767 |
steroid 17-alpha-hydroxylase/17,20 lyase |
|
ISO |
ClinVar Annotator: match by term: Desmoplastic/nodular medulloblastoma |
ClinVar |
PMID:12068298 |
|
NCBI chrNW_004936600:3,097,620...3,102,713
Ensembl chrNW_004936600:3,097,638...3,102,713
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G |
Mfsd13a |
major facilitator superfamily domain containing 13A |
|
ISO |
ClinVar Annotator: match by term: Desmoplastic/nodular medulloblastoma |
ClinVar |
PMID:12068298 |
|
NCBI chrNW_004936600:3,402,962...3,420,849
Ensembl chrNW_004936600:3,403,007...3,420,875
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G |
Neurl1 |
neuralized E3 ubiquitin protein ligase 1 |
|
ISO |
ClinVar Annotator: match by term: Desmoplastic/nodular medulloblastoma |
ClinVar |
PMID:12068298 |
|
NCBI chrNW_004936600:2,518,193...2,590,336
Ensembl chrNW_004936600:2,518,265...2,590,344
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G |
Nt5c2 |
5'-nucleotidase, cytosolic II |
|
ISO |
ClinVar Annotator: match by term: Desmoplastic/nodular medulloblastoma |
ClinVar |
PMID:12068298 |
|
NCBI chrNW_004936600:2,828,277...2,892,795
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G |
Pcgf6 |
polycomb group ring finger 6 |
|
ISO |
ClinVar Annotator: match by term: Desmoplastic/nodular medulloblastoma |
ClinVar |
PMID:12068298 |
|
NCBI chrNW_004936600:2,714,883...2,741,418
Ensembl chrNW_004936600:2,714,843...2,741,697
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|
G |
Pdcd11 |
programmed cell death 11 |
|
ISO |
ClinVar Annotator: match by term: Desmoplastic/nodular medulloblastoma |
ClinVar |
PMID:12068298 |
|
NCBI chrNW_004936600:2,631,520...2,676,315
Ensembl chrNW_004936600:2,631,940...2,673,379
|
|
G |
Sfr1 |
SWI5 dependent homologous recombination repair protein 1 |
|
ISO |
ClinVar Annotator: match by term: Desmoplastic/nodular medulloblastoma |
ClinVar |
PMID:12068298 |
|
NCBI chrNW_004936600:2,034,023...2,049,131
Ensembl chrNW_004936600:2,041,170...2,049,357
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|
G |
Sfxn2 |
sideroflexin 2 |
|
ISO |
ClinVar Annotator: match by term: Desmoplastic/nodular medulloblastoma |
ClinVar |
PMID:12068298 |
|
NCBI chrNW_004936600:3,173,472...3,190,041
Ensembl chrNW_004936600:3,173,336...3,188,649
|
|
G |
Sh3pxd2a |
SH3 and PX domains 2A |
|
ISO |
ClinVar Annotator: match by term: Desmoplastic/nodular medulloblastoma |
ClinVar |
PMID:12068298 |
|
NCBI chrNW_004936600:2,343,709...2,513,497
Ensembl chrNW_004936600:2,343,658...2,509,612
|
|
G |
Slk |
STE20 like kinase |
|
ISO |
ClinVar Annotator: match by term: Desmoplastic/nodular medulloblastoma |
ClinVar |
PMID:12068298 |
|
NCBI chrNW_004936600:2,134,374...2,193,302
Ensembl chrNW_004936600:2,137,798...2,193,192
|
|
G |
Stn1 |
STN1 subunit of CST complex |
|
ISO |
ClinVar Annotator: match by term: Desmoplastic/nodular medulloblastoma |
ClinVar |
PMID:12068298 |
|
NCBI chrNW_004936600:2,230,754...2,266,956
Ensembl chrNW_004936600:2,230,705...2,266,968
|
|
G |
Sufu |
SUFU negative regulator of hedgehog signaling |
|
ISO |
ClinVar Annotator: match by term: Desmoplastic/nodular medulloblastoma |
ClinVar |
PMID:12068298 |
|
NCBI chrNW_004936600:3,270,662...3,381,722
Ensembl chrNW_004936600:3,268,260...3,381,781
|
|
G |
Taf5 |
TATA-box binding protein associated factor 5 |
|
ISO |
ClinVar Annotator: match by term: Desmoplastic/nodular medulloblastoma |
ClinVar |
PMID:12068298 |
|
NCBI chrNW_004936600:2,683,045...2,700,272
Ensembl chrNW_004936600:2,679,807...2,700,274
|
|
G |
Trim8 |
tripartite motif containing 8 |
|
ISO |
ClinVar Annotator: match by term: Desmoplastic/nodular medulloblastoma |
ClinVar |
PMID:12068298 |
|
NCBI chrNW_004936600:3,244,888...3,259,042
Ensembl chrNW_004936600:3,244,405...3,259,218
|
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G |
Wbp1l |
WW domain binding protein 1 like |
|
ISO |
ClinVar Annotator: match by term: Desmoplastic/nodular medulloblastoma |
ClinVar |
PMID:12068298 |
|
NCBI chrNW_004936600:3,111,377...3,125,244
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|
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G |
Brip1 |
BRCA1 interacting DNA helicase 1 |
|
ISO |
ClinVar Annotator: match by term: Diffuse intrinsic pontine glioma |
ClinVar |
PMID:16116424 PMID:16116426 PMID:16973432 PMID:18510924 PMID:19099189 PMID:19150983 PMID:19379763 PMID:19442249 PMID:19519404 PMID:20639400 PMID:20980836 PMID:21345144 PMID:22024395 PMID:22287629 PMID:22582397 PMID:23161009 PMID:23276657 PMID:23644138 PMID:23935105 PMID:24448499 PMID:24487782 PMID:24573678 PMID:24728327 PMID:24895130 PMID:25374583 PMID:25583461 PMID:25741868 PMID:26315354 PMID:26596371 PMID:26689913 PMID:26790966 PMID:26921362 PMID:27107905 PMID:28492532 PMID:28911102 PMID:29922827 PMID:30322717 PMID:31265121 PMID:31341520 PMID:31822495 PMID:32427313 PMID:32542039 PMID:33028645 PMID:33471991 PMID:33619228 PMID:34585738 More...
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|
NCBI chrNW_004936490:3,001,445...3,139,538
Ensembl chrNW_004936490:3,003,484...3,137,479
|
|
G |
Nf1 |
neurofibromin 1 |
|
ISO |
ClinVar Annotator: match by term: Diffuse intrinsic pontine glioma |
ClinVar |
PMID:25741868 PMID:28492532 |
|
NCBI chrNW_004936538:3,394,623...3,596,025
Ensembl chrNW_004936538:3,398,222...3,595,261
|
|
|
G |
Alk |
ALK receptor tyrosine kinase |
|
ISO |
ClinVar Annotator: match by term: Diffuse pediatric-type high-grade glioma, H3-wildtype and IDH-wildtype |
ClinVar |
PMID:25741868 PMID:28492532 |
|
NCBI chrNW_004936493:3,624,288...3,671,567
Ensembl chrNW_004936493:3,028,608...3,671,874
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G |
Brca2 |
BRCA2 DNA repair associated |
|
ISO |
ClinVar Annotator: match by term: Diffuse pediatric-type high-grade glioma, H3-wildtype and IDH-wildtype |
ClinVar |
PMID:25741868 PMID:26467025 PMID:28492532 |
|
NCBI chrNW_004936472:26,945,659...27,017,693
|
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G |
Cdk4 |
cyclin dependent kinase 4 |
|
ISO |
ClinVar Annotator: match by term: Diffuse pediatric-type high-grade glioma, H3-wildtype and IDH-wildtype |
ClinVar |
PMID:25741868 PMID:28492532 |
|
NCBI chrNW_004936646:1,886,262...1,889,260
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G |
Fanca |
FA complementation group A |
|
ISO |
ClinVar Annotator: match by term: Diffuse pediatric-type high-grade glioma, H3-wildtype and IDH-wildtype |
ClinVar |
PMID:25741868 |
|
NCBI chrNW_004936641:281,119...319,796
Ensembl chrNW_004936641:281,073...324,053
|
|
G |
Fgfr3 |
fibroblast growth factor receptor 3 |
|
ISO |
ClinVar Annotator: match by term: Diffuse pediatric-type high-grade glioma, H3-wildtype and IDH-wildtype |
ClinVar |
PMID:25741868 PMID:28492532 |
|
NCBI chrNW_004936477:21,591,772...21,606,289
Ensembl chrNW_004936477:21,591,792...21,606,296
|
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G |
Idh1 |
isocitrate dehydrogenase (NADP(+)) 1 |
|
ISO |
ClinVar Annotator: match by term: Diffuse pediatric-type high-grade glioma, H3-wildtype and IDH-wildtype |
ClinVar |
PMID:25741868 |
|
NCBI chrNW_004936950:334,894...349,221
Ensembl chrNW_004936950:334,934...348,363
|
|
G |
Kdm5b |
lysine demethylase 5B |
|
ISO |
ClinVar Annotator: match by term: Diffuse pediatric-type high-grade glioma, H3-wildtype and IDH-wildtype |
ClinVar |
PMID:25741868 |
|
NCBI chrNW_004936567:1,782,056...1,860,861
Ensembl chrNW_004936567:1,781,995...1,863,461
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|
G |
Nf1 |
neurofibromin 1 |
|
ISO |
ClinVar Annotator: match by term: Diffuse pediatric-type high-grade glioma, H3-wildtype and IDH-wildtype |
ClinVar |
PMID:25741868 PMID:26740943 PMID:28492532 PMID:31882575 |
|
NCBI chrNW_004936538:3,394,623...3,596,025
Ensembl chrNW_004936538:3,398,222...3,595,261
|
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G |
Palb2 |
partner and localizer of BRCA2 |
|
ISO |
ClinVar Annotator: match by term: Diffuse pediatric-type high-grade glioma, H3-wildtype and IDH-wildtype |
ClinVar |
PMID:25741868 |
|
NCBI chrNW_004936501:8,246,927...8,273,258
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G |
Pms2 |
PMS1 homolog 2, mismatch repair system component |
|
ISO |
ClinVar Annotator: match by term: Diffuse pediatric-type high-grade glioma, H3-wildtype and IDH-wildtype |
ClinVar |
PMID:23435383 PMID:25741868 PMID:28492532 PMID:35451539 |
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NCBI chrNW_004936750:439,396...468,747
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G |
Ret |
ret proto-oncogene |
|
ISO |
ClinVar Annotator: match by term: Diffuse pediatric-type high-grade glioma, H3-wildtype and IDH-wildtype |
ClinVar |
PMID:22648184 PMID:25741868 PMID:28492532 PMID:28946813 PMID:31159747 PMID:32091409 PMID:33981013 More...
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|
NCBI chrNW_004936617:2,927,185...2,980,594
Ensembl chrNW_004936617:2,927,155...2,980,602
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G |
Sdha |
succinate dehydrogenase complex flavoprotein subunit A |
|
ISO |
ClinVar Annotator: match by term: Diffuse pediatric-type high-grade glioma, H3-wildtype and IDH-wildtype |
ClinVar |
PMID:25741868 PMID:28492532 |
|
NCBI chrNW_004936815:1,148,963...1,167,585
Ensembl chrNW_004936815:1,148,963...1,167,568
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G |
Tp53 |
tumor protein p53 |
|
ISO |
ClinVar Annotator: match by term: Diffuse pediatric-type high-grade glioma, H3-wildtype and IDH-wildtype |
ClinVar |
PMID:1349175 PMID:1565143 PMID:1565144 PMID:1631137 PMID:8401536 PMID:8402598 PMID:8425176 PMID:8718514 PMID:8829627 PMID:11370630 PMID:11782540 PMID:12826609 PMID:15958617 PMID:16206219 PMID:16818505 PMID:17015838 PMID:17606709 PMID:19012332 PMID:19468865 PMID:20407015 PMID:21059199 PMID:21305319 PMID:21343334 PMID:21519010 PMID:21761402 PMID:22186996 PMID:22672556 PMID:22915647 PMID:23161690 PMID:23246812 PMID:24573247 PMID:24857548 PMID:25186627 PMID:25584008 PMID:25619955 PMID:25741868 PMID:25952993 PMID:26014290 PMID:26230955 PMID:26585234 PMID:26845104 PMID:26878390 PMID:26911350 PMID:27077130 PMID:27276561 PMID:27463065 PMID:27680515 PMID:27895058 PMID:27959731 PMID:28369373 PMID:28472496 PMID:28492532 PMID:28975465 PMID:29581140 PMID:29979965 PMID:30224644 PMID:30327374 PMID:30709381 PMID:30816478 PMID:32000721 PMID:32475984 PMID:33300245 PMID:33407742 More...
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NCBI chrNW_004936595:919,807...935,367
Ensembl chrNW_004936595:919,428...925,425
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G |
Tspan31 |
tetraspanin 31 |
|
ISO |
ClinVar Annotator: match by term: Diffuse pediatric-type high-grade glioma, H3-wildtype and IDH-wildtype |
ClinVar |
PMID:25741868 PMID:28492532 |
|
NCBI chrNW_004936646:1,883,272...1,886,287
Ensembl chrNW_004936646:1,883,341...1,889,284
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G |
Braf |
B-Raf proto-oncogene, serine/threonine kinase |
|
ISO |
DNA:mutation:cds:p.V600E(human) |
RGD |
PMID:25346165 |
RGD:11567238 |
NCBI chrNW_004936592:4,728,371...4,833,830
Ensembl chrNW_004936592:4,737,011...4,834,664
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G |
Bcl7c |
BAF chromatin remodeling complex subunit BCL7C |
|
ISO |
CTD Direct Evidence: marker/mechanism |
CTD |
PMID:26075792 |
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NCBI chrNW_004936501:13,274,659...13,278,099
Ensembl chrNW_004936501:13,240,937...13,278,099
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G |
Ephb2 |
EPH receptor B2 |
|
ISO |
CTD Direct Evidence: marker/mechanism |
CTD |
PMID:26075792 |
|
NCBI chrNW_004936474:8,109,800...8,203,106
Ensembl chrNW_004936474:8,109,031...8,203,106
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G |
Gdnf |
glial cell derived neurotrophic factor |
|
ISO |
CTD Direct Evidence: marker/mechanism |
CTD |
PMID:19138852 |
|
NCBI chrNW_004936518:4,291,391...4,310,752
Ensembl chrNW_004936518:4,288,154...4,310,753
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G |
Igf2 |
insulin like growth factor 2 |
|
ISO |
mRNA:increased expression:cerebellum |
RGD |
PMID:18478565 |
RGD:5509961 |
NCBI chrNW_004936816:972,902...981,232
Ensembl chrNW_004936816:972,282...979,167
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G |
Rab3a |
RAB3A, member RAS oncogene family |
|
ISO |
CTD Direct Evidence: marker/mechanism |
CTD |
PMID:26075792 |
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NCBI chrNW_004936596:2,990,367...2,995,935
Ensembl chrNW_004936596:2,989,804...2,998,305
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G |
Rtbdn |
retbindin |
|
ISO |
CTD Direct Evidence: marker/mechanism |
CTD |
PMID:26075792 |
|
NCBI chrNW_004936659:1,907,933...1,911,690
Ensembl chrNW_004936659:1,907,936...1,911,994
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G |
Shc3 |
SHC adaptor protein 3 |
|
ISO |
DNA:amplification:brain: |
RGD |
PMID:19748727 |
RGD:13782069 |
NCBI chrNW_004936780:7,885...130,002
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G |
Znf668 |
zinc finger protein 668 |
|
ISO |
CTD Direct Evidence: marker/mechanism |
CTD |
PMID:26075792 |
|
NCBI chrNW_004936501:13,423,491...13,442,329
Ensembl chrNW_004936501:13,422,989...13,426,060
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G |
Smarcb1 |
SWI/SNF related BAF chromatin remodeling complex subunit B1 |
|
ISO |
protein:decreased expression:epithelial cell: |
RGD |
PMID:19033866 |
RGD:155804293 |
NCBI chrNW_004936619:1,276,239...1,308,945
Ensembl chrNW_004936619:1,275,362...1,308,913
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G |
Bap1 |
BRCA1 associated deubiquitinase 1 |
|
ISO |
ClinVar Annotator: match by term: Ewing sarcoma |
ClinVar |
PMID:9536098 PMID:17576681 PMID:25741868 PMID:28492532 |
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NCBI chrNW_004936473:3,239,009...3,247,806
Ensembl chrNW_004936473:3,239,010...3,247,806
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G |
Cd99 |
CD99 molecule (Xg blood group) |
|
ISO |
ClinVar Annotator: match by term: CD99 Positive Neoplastic Cells Present |
ClinVar |
PMID:25741868 |
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NCBI chrNW_004936644:3,557,082...3,566,057
Ensembl chrNW_004936644:3,557,048...3,566,046
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Cdk4 |
cyclin dependent kinase 4 |
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ISO |
ClinVar Annotator: match by term: Ewing sarcoma |
ClinVar |
PMID:24755471 PMID:25318351 PMID:25741868 PMID:26252490 PMID:26467025 PMID:26580448 PMID:28166811 PMID:28492532 PMID:30093976 PMID:30851086 More...
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NCBI chrNW_004936646:1,886,262...1,889,260
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Ciz1 |
CDKN1A interacting zinc finger protein 1 |
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ISO |
CTD Direct Evidence: marker/mechanism |
CTD |
PMID:17508423 |
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NCBI chrNW_004936487:15,728,982...15,748,737
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Egr2 |
early growth response 2 |
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ISO |
CTD Direct Evidence: marker/mechanism |
CTD |
PMID:26214589 |
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NCBI chrNW_004936753:1,958,250...1,962,640
Ensembl chrNW_004936753:1,958,264...1,962,640
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Ewsr1 |
EWS RNA binding protein 1 |
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ISO |
ClinVar Annotator: match by term: Ewing sarcoma |
OMIM ClinVar |
PMID:25741868 PMID:28492532 |
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NCBI chrNW_004936657:3,296,217...3,323,473
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Fli1 |
Fli-1 proto-oncogene, ETS transcription factor |
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ISO |
CTD Direct Evidence: marker/mechanism |
CTD |
PMID:11772151 PMID:16646077 PMID:26214589 |
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NCBI chrNW_004936572:3,448,870...3,576,406
Ensembl chrNW_004936572:3,448,862...3,577,836
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Kdm3a |
lysine demethylase 3A |
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ISO |
mRNA:increased expression:bone marrow (human) |
RGD |
PMID:24362521 |
RGD:9590218 |
NCBI chrNW_004936712:1,053,210...1,097,845
Ensembl chrNW_004936712:1,053,210...1,096,961
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Nf1 |
neurofibromin 1 |
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ISO |
ClinVar Annotator: match by term: Ewing sarcoma | ClinVar Annotator: match by term: Ewing tumor |
ClinVar |
PMID:7607663 PMID:9385374 PMID:9463322 PMID:10494088 PMID:10607834 PMID:10712197 PMID:11137998 PMID:12112660 PMID:12807981 PMID:15060124 PMID:16479075 PMID:16870183 PMID:17311297 PMID:20301288 PMID:22925204 PMID:23668869 PMID:23913538 PMID:25741868 PMID:25810463 PMID:26467025 PMID:26962827 PMID:27322474 PMID:27838393 PMID:28492532 PMID:30290804 PMID:30530636 PMID:31347283 PMID:31730495 PMID:36988593 More...
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NCBI chrNW_004936538:3,394,623...3,596,025
Ensembl chrNW_004936538:3,398,222...3,595,261
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Tspan31 |
tetraspanin 31 |
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ISO |
ClinVar Annotator: match by term: Ewing sarcoma |
ClinVar |
PMID:24755471 PMID:25318351 PMID:25741868 PMID:26252490 PMID:26467025 PMID:26580448 PMID:28166811 PMID:28492532 PMID:30093976 PMID:30851086 More...
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NCBI chrNW_004936646:1,883,272...1,886,287
Ensembl chrNW_004936646:1,883,341...1,889,284
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Ret |
ret proto-oncogene |
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ISO |
ClinVar Annotator: match by term: Ewing sarcoma of soft tissue |
ClinVar |
PMID:24336963 PMID:24429398 PMID:24755471 PMID:25256751 PMID:25741868 PMID:26467025 PMID:26580448 PMID:28492532 PMID:29263839 PMID:29642553 PMID:30583724 PMID:30680046 PMID:31428572 PMID:31658439 PMID:32099073 PMID:32179705 More...
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NCBI chrNW_004936617:2,927,185...2,980,594
Ensembl chrNW_004936617:2,927,155...2,980,602
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Nr4a3 |
nuclear receptor subfamily 4 group A member 3 |
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ISO |
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OMIM |
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NCBI chrNW_004936524:8,252,321...8,290,747
Ensembl chrNW_004936524:8,252,381...8,289,157
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Taf15 |
TATA-box binding protein associated factor 15 |
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ISO |
ClinVar Annotator: match by term: TAF15-related condition |
OMIM ClinVar |
PMID:25741868 PMID:28492532 |
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NCBI chrNW_004936490:199,226...230,190
Ensembl chrNW_004936490:199,201...230,244
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Cdc73 |
cell division cycle 73 |
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ISO |
ClinVar Annotator: match by term: Cystic parathyroid adenoma |
ClinVar |
PMID:12434154 |
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NCBI chrNW_004936638:1,365,457...1,482,497
Ensembl chrNW_004936638:1,365,648...1,483,277
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Glmn |
glomulin, FKBP associated protein |
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ISO |
ClinVar Annotator: match by term: Familial glomangioma |
ClinVar |
PMID:11175297 PMID:11845407 PMID:15689436 PMID:23801931 PMID:24033266 PMID:25741868 PMID:28492532 PMID:30460983 PMID:31483481 More...
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NCBI chrNW_004936537:6,778,317...6,827,384
Ensembl chrNW_004936537:6,777,965...6,829,881
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Rb1 |
RB transcriptional corepressor 1 |
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ISO |
ClinVar Annotator: match by term: Hereditary retinoblastoma |
ClinVar |
PMID:7881418 PMID:8346255 PMID:8605116 PMID:8651278 PMID:9536098 PMID:9671401 PMID:10486322 PMID:10617920 PMID:10671068 PMID:11668642 PMID:12541220 PMID:15884040 PMID:16269091 PMID:17096365 PMID:17576681 PMID:18449911 PMID:18677112 PMID:22084214 PMID:25741868 PMID:25754945 PMID:28492532 More...
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NCBI chrNW_004936565:1,596,227...1,746,706
Ensembl chrNW_004936565:1,597,593...1,746,846
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Kras |
KRAS proto-oncogene, GTPase |
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ISO |
mRNA:decreased expression:brain |
RGD |
PMID:19179066 |
RGD:13702872 |
NCBI chrNW_004936548:2,078,568...2,113,877
Ensembl chrNW_004936548:2,079,036...2,110,523
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Cdc42 |
cell division cycle 42 |
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ISO |
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RGD |
PMID:17971488 |
RGD:5688275 |
NCBI chrNW_004936474:7,556,765...7,598,687
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Ddr2 |
discoidin domain receptor tyrosine kinase 2 |
ameliorates |
ISO |
DNA:deletion:exons: |
RGD |
PMID:24293323 |
RGD:150429711 |
NCBI chrNW_004936831:799,948...946,139
Ensembl chrNW_004936831:865,965...946,139
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Egr1 |
early growth response 1 |
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ISO |
human tumor line expressing mouse gene in mouse model |
RGD |
PMID:7585551 |
RGD:5131944 |
NCBI chrNW_004936531:7,625,956...7,629,041
Ensembl chrNW_004936531:7,625,892...7,629,749
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Ercc6 |
ERCC excision repair 6, chromatin remodeling factor |
susceptibility |
ISO |
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RGD |
PMID:11238917 |
RGD:11567233 |
NCBI chrNW_004936728:706,499...843,447
Ensembl chrNW_004936728:761,804...844,690
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Nf1 |
neurofibromin 1 |
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ISO |
CTD Direct Evidence: marker/mechanism |
CTD |
PMID:20601955 |
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NCBI chrNW_004936538:3,394,623...3,596,025
Ensembl chrNW_004936538:3,398,222...3,595,261
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Serpine1 |
serpin family E member 1 |
severity |
ISO |
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RGD |
PMID:11059781 |
RGD:8547752 |
NCBI chrNW_004936543:1,032,543...1,040,956
Ensembl chrNW_004936543:1,032,794...1,039,123
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Tert |
telomerase reverse transcriptase |
treatment |
ISO |
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RGD |
PMID:19903903 |
RGD:11038656 |
NCBI chrNW_004936815:468,987...492,666
Ensembl chrNW_004936815:469,020...491,697
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Tnfrsf1a |
TNF receptor superfamily member 1A |
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ISO |
human gene in mouse model |
RGD |
PMID:10753499 |
RGD:5131435 |
NCBI chrNW_004936709:1,407,327...1,421,448
Ensembl chrNW_004936709:1,407,278...1,421,921
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Actr3 |
actin related protein 3 |
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ISO |
mRNA:increased expression:brain (human) |
RGD |
PMID:25682201 |
RGD:11570557 |
NCBI chrNW_004936469:55,639,345...55,699,330
Ensembl chrNW_004936469:55,639,068...55,699,640
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Adgrl4 |
adhesion G protein-coupled receptor L4 |
severity treatment |
ISO |
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RGD |
PMID:23096411 PMID:27416955 |
RGD:13838664 RGD:13838665 |
NCBI chrNW_004936571:5,587,077...5,691,623
Ensembl chrNW_004936571:5,587,059...5,691,670
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Akt1 |
AKT serine/threonine kinase 1 |
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ISO |
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RGD |
PMID:10802656 |
RGD:734543 |
NCBI chrNW_004936621:620,163...639,115
Ensembl chrNW_004936621:620,074...639,093
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Akt3 |
AKT serine/threonine kinase 3 |
disease_progression |
ISO |
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RGD |
PMID:27422127 |
RGD:13674164 |
NCBI chrNW_004936526:6,944,056...7,201,226
Ensembl chrNW_004936526:6,944,005...7,200,583
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Apc |
APC regulator of WNT signaling pathway |
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ISO |
CTD Direct Evidence: marker/mechanism |
CTD |
PMID:7661930 |
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NCBI chrNW_004936531:6,899,580...7,019,016
Ensembl chrNW_004936531:6,899,788...7,019,453
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Arrb2 |
arrestin beta 2 |
ameliorates |
ISO |
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RGD |
PMID:34007068 |
RGD:401938608 |
NCBI chrNW_004936677:3,173,054...3,181,475
Ensembl chrNW_004936677:3,172,925...3,181,520
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Aspm |
assembly factor for spindle microtubules |
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ISO |
mRNA:increased expression:brain: |
RGD |
PMID:18636190 |
RGD:13439742 |
NCBI chrNW_004936567:6,653,382...6,701,856
Ensembl chrNW_004936567:6,653,728...6,701,752
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Atm |
ATM serine/threonine kinase |
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ISO |
ClinVar Annotator: match by term: Glioblastoma |
ClinVar |
PMID:9054948 PMID:19781682 PMID:23322442 PMID:23807571 PMID:25525159 PMID:25614872 PMID:25741868 PMID:26467025 PMID:28492532 More...
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NCBI chrNW_004936551:359,134...534,672
Ensembl chrNW_004936551:359,362...532,211
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Atrx |
ATRX chromatin remodeler |
disease_progression |
ISO |
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RGD |
PMID:27478330 |
RGD:13442489 |
NCBI chrNW_004936683:2,496,307...2,718,539
Ensembl chrNW_004936683:2,495,959...2,718,620
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Bag3 |
BAG cochaperone 3 |
treatment |
ISO |
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RGD |
PMID:21561597 |
RGD:5687132 |
NCBI chrNW_004936486:8,985,871...9,007,461
Ensembl chrNW_004936486:8,985,761...9,007,502
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Bche |
butyrylcholinesterase |
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ISO |
CTD Direct Evidence: marker/mechanism |
CTD |
PMID:2317787 |
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NCBI chrNW_004936707:1,784,338...1,913,401
Ensembl chrNW_004936707:1,854,444...1,913,460
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Becn1 |
beclin 1 |
disease_progression |
ISO |
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RGD |
PMID:20863706 |
RGD:6483102 |
NCBI chrNW_004936490:17,518,100...17,531,126
Ensembl chrNW_004936490:17,517,751...17,531,151
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Bhlhe40 |
basic helix-loop-helix family member e40 |
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ISO |
CTD Direct Evidence: marker/mechanism |
CTD |
PMID:23582323 |
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NCBI chrNW_004936577:4,316,099...4,321,193
Ensembl chrNW_004936577:4,315,977...4,322,032
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Birc3 |
baculoviral IAP repeat containing 3 |
exacerbates |
ISO |
mRNA:increased expression:brain (human) |
RGD |
PMID:31964418 |
RGD:153344516 |
NCBI chrNW_004936551:5,544,047...5,556,550
Ensembl chrNW_004936551:5,544,065...5,556,555
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Bmi1 |
BMI1 proto-oncogene, polycomb ring finger |
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ISO |
CTD Direct Evidence: marker/mechanism |
CTD |
PMID:19823589 |
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NCBI chrNW_004936520:5,707,542...5,716,966
Ensembl chrNW_004936520:5,707,778...5,717,024
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Brd2 |
bromodomain containing 2 |
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ISO |
CTD Direct Evidence: marker/mechanism |
CTD |
PMID:27388964 |
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NCBI chrNW_004936476:25,807,179...25,818,914
Ensembl chrNW_004936476:25,807,163...25,818,899
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Brd4 |
bromodomain containing 4 |
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ISO |
CTD Direct Evidence: marker/mechanism |
CTD |
PMID:26455392 PMID:27388964 |
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NCBI chrNW_004936596:5,176,682...5,246,102
Ensembl chrNW_004936596:5,177,147...5,246,518
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Brd7 |
bromodomain containing 7 |
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ISO |
protein:increased expression:brain: |
RGD |
PMID:24404152 |
RGD:9586441 |
NCBI chrNW_004936475:3,394,423...3,432,998
Ensembl chrNW_004936475:3,393,373...3,433,103
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Cbx6 |
chromobox 6 |
disease_progression |
ISO |
mRNA,protein:decreased expression:astrocyte: |
RGD |
PMID:24260522 |
RGD:9587354 |
NCBI chrNW_004936492:2,522,126...2,532,382
Ensembl chrNW_004936492:2,521,553...2,532,516
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Cbx7 |
chromobox 7 |
disease_progression |
ISO |
mRNA,protein:decreased expression:astrocyte: |
RGD |
PMID:24260522 |
RGD:9587354 |
NCBI chrNW_004936492:2,411,171...2,428,484
Ensembl chrNW_004936492:2,410,308...2,428,682
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Cbx8 |
chromobox 8 |
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ISO |
mRNA:increased expression:astrocyte: |
RGD |
PMID:24260522 |
RGD:9587354 |
NCBI chrNW_004936594:3,906,714...3,911,604
Ensembl chrNW_004936594:3,906,697...3,911,714
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Ccnh |
cyclin H |
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ISO |
CTD Direct Evidence: marker/mechanism |
CTD |
PMID:30705370 |
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NCBI chrNW_004936469:5,933,163...5,952,190
Ensembl chrNW_004936469:5,935,131...5,952,460
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Cd9 |
CD9 molecule |
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ISO |
CTD Direct Evidence: marker/mechanism |
CTD |
PMID:26573230 |
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NCBI chrNW_004936709:1,497,504...1,530,114
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Cdk4 |
cyclin dependent kinase 4 |
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ISO |
DNA:amplication |
RGD |
PMID:23796897 |
RGD:13702089 |
NCBI chrNW_004936646:1,886,262...1,889,260
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Cdk6 |
cyclin dependent kinase 6 |
severity |
ISO |
CTD Direct Evidence: marker/mechanism |
RGD CTD |
PMID:10884881 PMID:20534551 |
RGD:13702095 |
NCBI chrNW_004936803:1,025,047...1,229,396
Ensembl chrNW_004936803:1,024,779...1,227,516
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Chaf1b |
chromatin assembly factor 1 subunit B |
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ISO |
protein:increased expression:brain: |
RGD |
PMID:24039914 |
RGD:9587472 |
NCBI chrNW_004936500:6,262,207...6,288,833
Ensembl chrNW_004936500:6,262,229...6,288,839
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Chi3l1 |
chitinase 3 like 1 |
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ISO |
mRNA:increased expression:brain, tumor (human) CTD Direct Evidence: marker/mechanism |
RGD CTD |
PMID:11161003 PMID:21029458 |
RGD:4892621 |
NCBI chrNW_004936567:1,411,080...1,418,332
Ensembl chrNW_004936567:1,411,037...1,418,801
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Cpe |
carboxypeptidase E |
disease_progression |
ISO |
mRNA, protein:decreased expression:brain tumor (human) |
RGD |
PMID:22249620 |
RGD:405650684 |
NCBI chrNW_004936555:531,842...641,905
Ensembl chrNW_004936555:530,307...641,905
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Cpeb1 |
cytoplasmic polyadenylation element binding protein 1 |
disease_progression |
ISO |
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RGD |
PMID:23360795 |
RGD:9685152 |
NCBI chrNW_004936483:17,216,288...17,296,430
Ensembl chrNW_004936483:17,216,213...17,294,534
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Csta |
cystatin A |
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ISO |
CTD Direct Evidence: marker/mechanism |
CTD |
PMID:22287159 |
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NCBI chrNW_004936536:8,649,890...8,662,472
Ensembl chrNW_004936536:8,649,703...8,662,490
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Cstb |
cystatin B |
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ISO |
CTD Direct Evidence: marker/mechanism |
CTD |
PMID:22287159 |
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NCBI chrNW_004936500:502,444...503,307
Ensembl chrNW_004936500:502,237...503,578
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Ctnnd2 |
catenin delta 2 |
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ISO |
CTD Direct Evidence: marker/mechanism |
CTD |
PMID:23917401 |
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NCBI chrNW_004936643:2,945,994...3,799,321
Ensembl chrNW_004936643:2,946,899...3,358,093
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Ctsh |
cathepsin H |
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ISO |
protein:increased expression:brain |
RGD |
PMID:8640738 |
RGD:1549417 |
NCBI chrNW_004936471:37,135,200...37,156,081
Ensembl chrNW_004936471:37,131,817...37,156,476
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Ctsk |
cathepsin K |
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ISO |
CTD Direct Evidence: marker/mechanism |
CTD |
PMID:25356585 |
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NCBI chrNW_004936580:1,022,762...1,038,020
Ensembl chrNW_004936580:1,022,762...1,034,984
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CUNH11orf65 |
chromosome unknown C11orf65 homolog |
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ISO |
ClinVar Annotator: match by term: Glioblastoma |
ClinVar |
PMID:9054948 PMID:19781682 PMID:23322442 PMID:23807571 PMID:25525159 PMID:25614872 PMID:25741868 PMID:26467025 PMID:28492532 More...
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NCBI chrNW_004936551:305,617...343,369
Ensembl chrNW_004936551:305,611...351,063
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Deup1 |
deuterosome assembly protein 1 |
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ISO |
CTD Direct Evidence: marker/mechanism |
CTD |
PMID:30705370 |
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NCBI chrNW_004936674:1,334,605...1,401,943
Ensembl chrNW_004936674:1,334,605...1,401,943
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Dnmt3a |
DNA methyltransferase 3 alpha |
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ISO |
ClinVar Annotator: match by term: Glioblastoma |
ClinVar |
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NCBI chrNW_004936493:6,963,406...7,013,256
Ensembl chrNW_004936493:6,935,386...7,007,610
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Dusp6 |
dual specificity phosphatase 6 |
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ISO |
CTD Direct Evidence: marker/mechanism |
CTD |
PMID:21499306 |
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NCBI chrNW_004936507:6,309,114...6,314,512
Ensembl chrNW_004936507:6,308,886...6,313,935
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E2f1 |
E2F transcription factor 1 |
disease_progression |
ISO |
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RGD |
PMID:16264179 |
RGD:13702471 |
NCBI chrNW_004936561:6,894,827...6,901,058
Ensembl chrNW_004936561:6,896,063...6,900,026
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Egf |
epidermal growth factor |
susceptibility |
ISO |
CTD Direct Evidence: marker/mechanism DNA:polymorphism:promoter:+61A>G(human) |
CTD RGD |
PMID:16598420 PMID:22481252 |
RGD:13702472 |
NCBI chrNW_004936563:1,058,803...1,181,393
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Egfr |
epidermal growth factor receptor |
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ISO |
CTD Direct Evidence: marker/mechanism |
CTD |
PMID:19204207 PMID:23917401 PMID:26455392 |
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NCBI chrNW_004936678:365,005...560,546
Ensembl chrNW_004936678:365,834...436,528
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Enpp1 |
ectonucleotide pyrophosphatase/phosphodiesterase 1 |
severity |
ISO |
protein:increased expression:brain (human) |
RGD |
PMID:21195542 |
RGD:13204719 |
NCBI chrNW_004937067:194,375...246,607
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Ezh2 |
enhancer of zeste 2 polycomb repressive complex 2 subunit |
treatment |
ISO |
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RGD |
PMID:25595591 |
RGD:14928319 |
NCBI chrNW_004936527:5,024,077...5,069,152
Ensembl chrNW_004936527:5,024,068...5,063,939
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G |
Fabp7 |
fatty acid binding protein 7 |
severity |
ISO |
mRNA, protein:increased expression:brain (human) |
RGD |
PMID:15827123 |
RGD:1578468 |
NCBI chrNW_004936802:1,092,448...1,096,293
Ensembl chrNW_004936802:1,092,404...1,101,672
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G |
Fam83d |
family with sequence similarity 83 member D |
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ISO |
CTD Direct Evidence: marker/mechanism |
CTD |
PMID:35150198 |
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NCBI chrNW_004936561:2,528,463...2,549,665
Ensembl chrNW_004936561:2,528,404...2,549,711
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G |
Fat1 |
FAT atypical cadherin 1 |
|
ISO |
CTD Direct Evidence: marker/mechanism |
CTD |
PMID:23354438 |
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NCBI chrNW_004936554:2,872,729...2,996,821
Ensembl chrNW_004936554:2,872,713...2,996,823
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G |
Flt3lg |
fms related receptor tyrosine kinase 3 ligand |
treatment |
ISO |
|
RGD |
PMID:18079358 |
RGD:11049502 |
NCBI chrNW_004936664:3,343,541...3,351,590
Ensembl chrNW_004936664:3,343,491...3,350,176
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G |
Fn1 |
fibronectin 1 |
|
ISO |
CTD Direct Evidence: marker/mechanism |
CTD |
PMID:17099729 |
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NCBI chrNW_004936586:1,708,803...1,773,372
Ensembl chrNW_004936586:1,708,684...1,773,383
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G |
Fosl2 |
FOS like 2, AP-1 transcription factor subunit |
|
ISO |
CTD Direct Evidence: marker/mechanism |
CTD |
PMID:23582323 |
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NCBI chrNW_004936493:4,308,683...4,327,102
Ensembl chrNW_004936493:4,304,395...4,327,179
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G |
Fxn |
frataxin |
|
ISO |
|
RGD |
PMID:21863062 |
RGD:401793715 |
NCBI chrNW_004936503:5,323,206...5,343,228
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G |
Gdnf |
glial cell derived neurotrophic factor |
|
ISO |
CTD Direct Evidence: marker/mechanism |
CTD |
PMID:19138852 |
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NCBI chrNW_004936518:4,291,391...4,310,752
Ensembl chrNW_004936518:4,288,154...4,310,753
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G |
Grik2 |
glutamate ionotropic receptor kainate type subunit 2 |
|
ISO |
CTD Direct Evidence: marker/mechanism |
CTD |
PMID:30705370 |
|
NCBI chrNW_004936651:2,756,559...3,401,806
Ensembl chrNW_004936651:2,762,380...3,401,808
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G |
Heatr1 |
HEAT repeat containing 1 |
|
ISO |
mRNA, protein:increased expression:brain |
RGD |
PMID:25126583 |
RGD:10761721 |
NCBI chrNW_004936484:16,310,766...16,355,977
Ensembl chrNW_004936484:16,312,223...16,357,099
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G |
Hes1 |
hes family bHLH transcription factor 1 |
|
ISO |
CTD Direct Evidence: marker/mechanism |
CTD |
PMID:21127729 |
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NCBI chrNW_004936711:640,002...642,580
Ensembl chrNW_004936711:639,905...642,622
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G |
Hey1 |
hes related family bHLH transcription factor with YRPW motif 1 |
|
ISO |
CTD Direct Evidence: marker/mechanism |
CTD |
PMID:21127729 |
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NCBI chrNW_004936871:666,961...670,910
Ensembl chrNW_004936871:666,938...670,916
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G |
Hif1a |
hypoxia inducible factor 1 subunit alpha |
|
ISO |
CTD Direct Evidence: marker/mechanism |
CTD |
PMID:12811834 |
|
NCBI chrNW_004936495:5,770,988...5,816,157
Ensembl chrNW_004936495:5,770,669...5,816,157
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G |
Hoxd10 |
homeobox D10 |
|
ISO |
CTD Direct Evidence: marker/mechanism |
CTD |
PMID:34737577 |
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NCBI chrNW_004936509:5,603,661...5,606,850
Ensembl chrNW_004936509:5,603,642...5,606,850
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G |
Hras |
HRas proto-oncogene, GTPase |
severity |
ISO |
ClinVar Annotator: match by term: Glioblastoma | ClinVar Annotator: match by term: Glioblastoma, somatic |
ClinVar RGD |
PMID:11150980 PMID:16155195 PMID:16170316 PMID:16329078 PMID:16372351 PMID:16443854 PMID:16835863 PMID:16881968 PMID:16969868 PMID:17054105 PMID:17412879 PMID:17601930 PMID:17979197 PMID:18039947 PMID:18042262 PMID:18247425 PMID:18978862 PMID:19179066 PMID:19206176 PMID:19371735 PMID:19382114 PMID:19669404 PMID:20660566 PMID:20979192 PMID:21686750 PMID:21834037 PMID:21850009 PMID:22087699 PMID:22317973 PMID:22420426 PMID:22495892 PMID:22499344 PMID:22683711 PMID:22926243 PMID:23093928 PMID:23429430 PMID:23751039 PMID:24033266 PMID:24129065 PMID:24169525 PMID:24224811 PMID:24803665 PMID:25157968 PMID:25741868 PMID:25914166 PMID:26467025 PMID:26619011 PMID:27195699 PMID:27589201 PMID:28027064 PMID:28139825 PMID:28492532 PMID:29493581 PMID:31394527 PMID:31775759 PMID:33372952 PMID:34008892 More...
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RGD:13702872 |
NCBI chrNW_004936888:375,372...378,125
Ensembl chrNW_004936888:375,377...377,958
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G |
Idh1 |
isocitrate dehydrogenase (NADP(+)) 1 |
onset disease_progression |
ISO |
DNA:mutation:cds:p.R132H(human) ClinVar Annotator: match by term: Glioblastoma, somatic DNA:mutation:cds:p.R132(human) |
RGD ClinVar |
PMID:18772396 PMID:19765000 PMID:21446021 PMID:25043048 PMID:25495392 PMID:25741868 PMID:36201590 More...
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RGD:11074562 RGD:11522732 |
NCBI chrNW_004936950:334,894...349,221
Ensembl chrNW_004936950:334,934...348,363
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G |
Il16 |
interleukin 16 |
|
ISO |
protein:increased expression:brain |
RGD |
PMID:17221335 |
RGD:5024941 |
NCBI chrNW_004936483:19,417,580...19,512,654
Ensembl chrNW_004936483:19,418,086...19,512,639
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G |
Il1b |
interleukin 1 beta |
|
ISO |
CTD Direct Evidence: marker/mechanism |
CTD |
PMID:16356833 |
|
NCBI chrNW_004936783:1,251,678...1,256,807
Ensembl chrNW_004936783:1,252,158...1,257,165
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G |
Il2 |
interleukin 2 |
|
ISO |
CTD Direct Evidence: therapeutic |
CTD |
PMID:7719933 |
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NCBI chrNW_004936662:1,594,953...1,599,625
Ensembl chrNW_004936662:1,594,953...1,599,625
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G |
Jag1 |
jagged canonical Notch ligand 1 |
|
ISO |
CTD Direct Evidence: marker/mechanism |
CTD |
PMID:21127729 |
|
NCBI chrNW_004936485:8,857,688...8,894,270
Ensembl chrNW_004936485:8,857,669...8,895,315
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G |
Jag2 |
jagged canonical Notch ligand 2 |
|
ISO |
CTD Direct Evidence: marker/mechanism |
CTD |
PMID:21127729 |
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NCBI chrNW_004936621:363,489...380,616
Ensembl chrNW_004936621:366,616...380,618
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G |
Kcnc2 |
potassium voltage-gated channel subfamily C member 2 |
|
ISO |
mRNA:splice variant (human) |
RGD |
PMID:18474104 |
RGD:9686067 |
NCBI chrNW_004936568:3,508,212...3,694,459
Ensembl chrNW_004936568:3,511,244...3,694,781
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G |
Kdr |
kinase insert domain receptor |
treatment |
ISO |
|
RGD |
PMID:26325365 |
RGD:11529678 |
NCBI chrNW_004936482:17,537,697...17,581,320
Ensembl chrNW_004936482:17,538,864...17,581,002
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G |
Kras |
KRAS proto-oncogene, GTPase |
treatment |
ISO |
mRNA:decreased expression:brain |
RGD |
PMID:16166301 PMID:19179066 |
RGD:13702861 RGD:13702872 |
NCBI chrNW_004936548:2,078,568...2,113,877
Ensembl chrNW_004936548:2,079,036...2,110,523
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G |
L1cam |
L1 cell adhesion molecule |
|
ISO |
mRNA:decreased expression:brain, temporal lobe (human) |
RGD |
PMID:20419098 |
RGD:6483067 |
NCBI chrNW_004936809:736,385...768,822
Ensembl chrNW_004936809:736,319...761,973
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G |
LOC101959402 |
deleted in malignant brain tumors 1 protein |
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ISO |
DNA:deletion |
RGD |
PMID:9288095 |
RGD:1599778 |
NCBI chrNW_004936486:11,377,485...11,545,624
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G |
LOC101963041 |
histone H3.3A |
|
ISO |
ClinVar Annotator: match by term: Glioblastoma |
ClinVar |
PMID:26822237 |
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NCBI chrNW_004936526:2,835,002...2,842,328
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G |
LOC101964702 |
adhesion G protein-coupled receptor B1 |
treatment |
ISO |
mRNA:decreased expression:brain: |
RGD |
PMID:12507886 PMID:16244591 |
RGD:13831352 RGD:13831355 |
NCBI chrNW_004936470:9,247,749...9,313,230
Ensembl chrNW_004936470:9,248,319...9,313,230
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G |
LOC101964975 |
interleukin-8 |
|
ISO |
CTD Direct Evidence: marker/mechanism |
CTD |
PMID:16356833 |
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NCBI chrNW_004936598:1,779,471...1,781,353
Ensembl chrNW_004936598:1,779,471...1,781,353
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G |
LOC101965998 |
notch receptor 2 |
|
ISO |
CTD Direct Evidence: marker/mechanism |
CTD |
PMID:21127729 |
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NCBI chrNW_004936872:454,273...539,544
Ensembl chrNW_004936872:390,852...536,321
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G |
LOC101966907 |
histone H2AX |
|
ISO |
CTD Direct Evidence: marker/mechanism |
CTD |
PMID:26651356 |
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NCBI chrNW_004936542:4,046,930...4,049,017
Ensembl chrNW_004936542:4,047,915...4,048,346
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G |
Lrrc59 |
leucine rich repeat containing 59 |
|
ISO |
CTD Direct Evidence: marker/mechanism |
CTD |
PMID:30705370 |
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NCBI chrNW_004936490:11,296,590...11,308,379
Ensembl chrNW_004936490:11,296,530...11,310,946
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G |
Ltbp4 |
latent transforming growth factor beta binding protein 4 |
|
ISO |
CTD Direct Evidence: marker/mechanism |
CTD |
PMID:27270107 |
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NCBI chrNW_004936661:2,919,444...2,945,847
Ensembl chrNW_004936661:2,919,550...2,945,599
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G |
Lztr1 |
leucine zipper like post translational regulator 1 |
|
ISO |
CTD Direct Evidence: marker/mechanism DNA:mutations:multiple (human) |
CTD RGD |
PMID:23917401 |
RGD:151708722 |
NCBI chrNW_004936619:2,505,300...2,523,500
Ensembl chrNW_004936619:2,505,542...2,523,500
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G |
Macir |
macrophage immunometabolism regulator |
|
ISO |
CTD Direct Evidence: marker/mechanism |
CTD |
PMID:30705370 |
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NCBI chrNW_004936523:1,273,812...1,292,837
Ensembl chrNW_004936523:1,275,214...1,292,854
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G |
Map1lc3a |
microtubule associated protein 1 light chain 3 alpha |
treatment |
ISO |
|
RGD |
PMID:24905460 |
RGD:11561946 |
NCBI chrNW_004936561:6,104,748...6,106,348
Ensembl chrNW_004936561:6,104,742...6,106,699
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G |
Map2k2 |
mitogen-activated protein kinase kinase 2 |
treatment |
ISO |
|
RGD |
PMID:26189368 |
RGD:13702862 |
NCBI chrNW_004936588:2,338,127...2,377,090
Ensembl chrNW_004936588:2,336,858...2,377,090
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G |
Map2k3 |
mitogen-activated protein kinase kinase 3 |
disease_progression |
ISO |
protein:increased expression, increased phosphorylation:brain |
RGD |
PMID:17406030 |
RGD:1641940 |
NCBI chrNW_004936741:362,682...386,633
Ensembl chrNW_004936741:362,387...386,678
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G |
Mdm2 |
MDM2 proto-oncogene |
|
ISO |
DNA:amplication |
RGD |
PMID:23796897 |
RGD:13702089 |
NCBI chrNW_004936545:6,709,903...6,732,334
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G |
Mdm4 |
MDM4 regulator of p53 |
|
ISO |
CTD Direct Evidence: marker/mechanism |
CTD |
PMID:20472715 |
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NCBI chrNW_004936567:268,151...299,494
Ensembl chrNW_004936567:268,151...299,494
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G |
Med12 |
mediator complex subunit 12 |
|
ISO |
ClinVar Annotator: match by term: Glioblastoma |
ClinVar |
PMID:26822237 |
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NCBI chrNW_004936762:460,342...483,264
Ensembl chrNW_004936762:460,342...483,195
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G |
Met |
MET proto-oncogene, receptor tyrosine kinase |
|
ISO |
CTD Direct Evidence: marker/mechanism |
CTD |
PMID:22162573 |
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NCBI chrNW_004936589:2,280,803...2,390,179
Ensembl chrNW_004936589:2,280,799...2,390,179
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G |
Mgmt |
O-6-methylguanine-DNA methyltransferase |
|
ISO |
CTD Direct Evidence: marker/mechanism DNA:transition:cds:p.L84F (human) |
CTD RGD |
PMID:14669534 PMID:20131314 PMID:22162573 |
RGD:2317667 |
NCBI chrNW_004936486:16,744,607...16,923,209
Ensembl chrNW_004936486:16,744,570...16,923,543
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G |
Mmp2 |
matrix metallopeptidase 2 |
severity |
ISO |
protein:increased expression:brain (human) CTD Direct Evidence: marker/mechanism |
RGD CTD |
PMID:7616276 PMID:16598420 |
RGD:7207145 |
NCBI chrNW_004936475:7,801,356...7,825,831
Ensembl chrNW_004936475:7,801,277...7,825,851
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G |
Mmp7 |
matrix metallopeptidase 7 |
severity |
ISO |
protein:increased expression:brain (human) |
RGD |
PMID:7616276 |
RGD:7207145 |
NCBI chrNW_004936551:5,388,456...5,395,071
Ensembl chrNW_004936551:5,388,459...5,395,071
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G |
Mmp9 |
matrix metallopeptidase 9 |
severity treatment |
ISO |
CTD Direct Evidence: marker/mechanism protein:increased expression:brain (human) |
CTD RGD |
PMID:7616276 PMID:12439751 PMID:16598420 |
RGD:7207145 RGD:8547973 |
NCBI chrNW_004936514:7,038,240...7,045,873
Ensembl chrNW_004936514:7,037,639...7,045,793
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G |
Msh2 |
mutS homolog 2 |
|
ISO |
ClinVar Annotator: match by term: Glioblastoma |
ClinVar |
PMID:25741868 |
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NCBI chrNW_004936508:4,943,987...5,013,356
Ensembl chrNW_004936508:4,944,007...5,013,356
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G |
Mtor |
mechanistic target of rapamycin kinase |
|
ISO |
CTD Direct Evidence: marker/mechanism |
CTD |
PMID:30705370 |
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NCBI chrNW_004936474:158,376...282,310
Ensembl chrNW_004936474:157,590...282,342
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G |
Myc |
MYC proto-oncogene, bHLH transcription factor |
|
ISO |
CTD Direct Evidence: marker/mechanism |
CTD |
PMID:21127729 |
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NCBI chrNW_004936470:20,480,844...20,485,955
Ensembl chrNW_004936470:20,480,829...20,485,965
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G |
Ncor1 |
nuclear receptor corepressor 1 |
|
ISO |
CTD Direct Evidence: marker/mechanism |
CTD |
PMID:17312396 |
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NCBI chrNW_004936821:382,756...538,254
Ensembl chrNW_004936821:382,383...536,223
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G |
Ndrg1 |
N-myc downstream regulated 1 |
|
ISO |
CTD Direct Evidence: marker/mechanism |
CTD |
PMID:15341671 |
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NCBI chrNW_004936470:16,051,291...16,102,563
Ensembl chrNW_004936470:16,051,015...16,102,585
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G |
Ndrg4 |
NDRG family member 4 |
|
ISO |
mRNA, protein:decreased expression:brain |
RGD |
PMID:22489821 |
RGD:7247726 |
NCBI chrNW_004936475:10,254,511...10,296,593
Ensembl chrNW_004936475:10,255,197...10,296,620
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G |
Nf1 |
neurofibromin 1 |
|
ISO |
CTD Direct Evidence: marker/mechanism |
CTD |
PMID:25119042 |
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NCBI chrNW_004936538:3,394,623...3,596,025
Ensembl chrNW_004936538:3,398,222...3,595,261
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G |
Nfkbia |
NFKB inhibitor alpha |
treatment |
ISO |
human cell line in a mouse model |
RGD |
PMID:15692608 |
RGD:127285387 |
NCBI chrNW_004936494:9,537,793...9,541,187
Ensembl chrNW_004936494:9,537,008...9,541,612
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G |
Notch1 |
notch receptor 1 |
|
ISO |
CTD Direct Evidence: marker/mechanism |
CTD |
PMID:21127729 |
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NCBI chrNW_004936669:1,292,016...1,334,061
Ensembl chrNW_004936669:1,292,088...1,332,428
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G |
Notch3 |
notch receptor 3 |
|
ISO |
CTD Direct Evidence: marker/mechanism |
CTD |
PMID:21127729 |
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NCBI chrNW_004936596:5,265,984...5,301,430
Ensembl chrNW_004936596:5,265,999...5,300,429
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G |
Nras |
NRAS proto-oncogene, GTPase |
|
ISO |
DNA:mutation:cds:c.35G>A, p.G12D(human) DNA:amplication:: |
RGD |
PMID:11351043 PMID:15517309 |
RGD:13702875 RGD:13702876 |
NCBI chrNW_004936627:73,413...82,590
Ensembl chrNW_004936627:73,413...82,590
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G |
Pdgfb |
platelet derived growth factor subunit B |
|
ISO |
|
RGD |
PMID:21210235 |
RGD:6482799 |
NCBI chrNW_004936492:2,353,840...2,368,573
Ensembl chrNW_004936492:2,353,841...2,368,573
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G |
Pdgfrb |
platelet derived growth factor receptor beta |
treatment |
ISO |
|
RGD |
PMID:24566984 |
RGD:13702903 |
NCBI chrNW_004936504:4,762,251...4,799,789
Ensembl chrNW_004936504:4,762,184...4,799,829
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G |
Pdpn |
podoplanin |
|
ISO |
|
RGD |
PMID:16979138 |
RGD:2292241 |
NCBI chrNW_004936474:1,751,159...1,779,011
Ensembl chrNW_004936474:1,750,944...1,781,156
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G |
Pecam1 |
platelet and endothelial cell adhesion molecule 1 |
|
ISO |
|
RGD |
PMID:21858729 |
RGD:6771207 |
NCBI chrNW_004936541:4,873,459...4,919,787
Ensembl chrNW_004936541:4,873,182...4,937,500
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G |
Pgf |
placental growth factor |
disease_progression |
ISO |
|
RGD |
PMID:20458050 |
RGD:6483585 |
NCBI chrNW_004936488:4,098,187...4,111,108
Ensembl chrNW_004936488:4,098,225...4,111,142
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G |
Pik3ca |
phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha |
|
ISO |
ClinVar Annotator: match by term: Glioblastoma | ClinVar Annotator: match by term: Glioblastoma, somatic ClinVar Annotator: match by term: Glioblastoma | ClinVar Annotator: match by term: Glioblastoma multiforme |
ClinVar |
PMID:15016963 PMID:15254419 PMID:15520168 PMID:15608678 PMID:15647370 PMID:15805248 PMID:15930273 PMID:16339315 PMID:16353168 PMID:16906227 PMID:16930767 PMID:17376864 PMID:17673550 PMID:18074223 PMID:18371219 PMID:18676830 PMID:18725974 PMID:19029981 PMID:19223544 PMID:19366826 PMID:19513541 PMID:19671852 PMID:19903786 PMID:20177704 PMID:20453058 PMID:20581867 PMID:20593314 PMID:20619739 PMID:21078999 PMID:21430269 PMID:21558396 PMID:21824802 PMID:22120714 PMID:22162582 PMID:22162589 PMID:22209294 PMID:22271473 PMID:22357840 PMID:22370636 PMID:22658544 PMID:22729222 PMID:22729223 PMID:22729224 PMID:22949682 PMID:23066039 PMID:23100325 PMID:23246288 PMID:23408298 PMID:23888070 PMID:23946963 PMID:24033266 PMID:24265155 PMID:24559322 PMID:24782230 PMID:25157968 PMID:25599672 PMID:25681199 PMID:25741868 PMID:25880439 PMID:25915946 PMID:26266975 PMID:26266985 PMID:26619011 PMID:26627007 PMID:26637981 PMID:26822237 PMID:26851524 PMID:27126994 PMID:27283355 PMID:27626068 PMID:27631024 PMID:28151489 PMID:28425981 PMID:28492532 PMID:28941273 PMID:29296277 PMID:29446767 PMID:29661094 PMID:29758562 PMID:29988677 PMID:30063105 PMID:30376034 PMID:30543347 PMID:31536475 PMID:31568861 PMID:31775759 PMID:32778138 PMID:34008892 PMID:34496175 PMID:34568242 PMID:34606700 PMID:36474027 PMID:37667289 PMID:37712948 More...
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NCBI chrNW_004936566:3,924,013...3,951,052
Ensembl chrNW_004936566:3,923,934...3,951,073
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G |
Pik3cb |
phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit beta |
disease_progression |
ISO |
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RGD |
PMID:21188471 PMID:26956052 |
RGD:11343921 RGD:13782050 |
NCBI chrNW_004936540:907,118...1,041,814
Ensembl chrNW_004936540:907,112...1,041,848
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G |
Pik3cd |
phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit delta |
disease_progression |
ISO |
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RGD |
PMID:24523440 |
RGD:13782051 |
NCBI chrNW_004936623:3,672,201...3,696,959
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G |
Pim1 |
Pim-1 proto-oncogene, serine/threonine kinase |
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ISO |
CTD Direct Evidence: marker/mechanism |
CTD |
PMID:23724780 |
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NCBI chrNW_004936476:22,295,023...22,300,155
Ensembl chrNW_004936476:22,295,021...22,300,161
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G |
Pml |
PML nuclear body scaffold |
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ISO |
CTD Direct Evidence: marker/mechanism |
CTD |
PMID:23440206 |
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NCBI chrNW_004936471:33,135,186...33,173,218
Ensembl chrNW_004936471:33,135,164...33,177,666
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G |
Polk |
DNA polymerase kappa |
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ISO |
CTD Direct Evidence: marker/mechanism |
CTD |
PMID:26651356 |
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NCBI chrNW_004936549:1,199,810...1,261,889
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G |
Pot1 |
protection of telomeres 1 |
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ISO |
ClinVar Annotator: match by term: Glioblastoma, somatic |
ClinVar |
PMID:28492532 |
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NCBI chrNW_004936605:836,824...919,099
Ensembl chrNW_004936605:836,769...920,201
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G |
Pparg |
peroxisome proliferator activated receptor gamma |
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ISO |
ClinVar Annotator: match by term: Glioblastoma, somatic |
ClinVar |
PMID:9467001 PMID:10381354 PMID:10523018 PMID:10690291 PMID:10851250 PMID:14569127 PMID:14616762 PMID:14671186 PMID:25741868 PMID:28492532 More...
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NCBI chrNW_004936602:1,230,907...1,368,588
Ensembl chrNW_004936602:1,230,907...1,304,743
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G |
Prkn |
parkin RBR E3 ubiquitin protein ligase |
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ISO |
CTD Direct Evidence: marker/mechanism |
CTD |
PMID:19946270 |
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NCBI chrNW_004936489:12,118,538...12,913,664
Ensembl chrNW_004936489:12,120,678...13,327,872
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G |
Prom1 |
prominin 1 |
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ISO |
CTD Direct Evidence: marker/mechanism |
CTD |
PMID:18679414 PMID:18829568 PMID:19718438 |
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NCBI chrNW_004936477:11,878,261...12,017,228
Ensembl chrNW_004936477:11,878,012...12,018,177
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G |
Ptgs1 |
prostaglandin-endoperoxide synthase 1 |
disease_progression |
ISO |
protein:increased expression:microglia, macrophage, |
RGD |
PMID:10229132 PMID:11121536 |
RGD:5688245 RGD:5688250 |
NCBI chrNW_004936487:10,745,465...10,758,812
Ensembl chrNW_004936487:10,745,327...10,758,823
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G |
Ptgs2 |
prostaglandin-endoperoxide synthase 2 |
disease_progression |
ISO |
protein:increased expression:endothelial cell |
RGD |
PMID:10229132 PMID:11121536 |
RGD:5688245 RGD:5688250 |
NCBI chrNW_004936481:3,821,564...3,828,086
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G |
Ptk2 |
protein tyrosine kinase 2 |
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ISO |
CTD Direct Evidence: marker/mechanism |
CTD |
PMID:12811834 |
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NCBI chrNW_004936470:10,379,855...10,578,531
Ensembl chrNW_004936470:10,379,872...10,578,543
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G |
Ptn |
pleiotrophin |
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ISO |
protein:increased expression:brain (human) |
RGD |
PMID:14692702 |
RGD:151660507 |
NCBI chrNW_004936592:1,706,979...1,806,345
Ensembl chrNW_004936592:1,707,693...1,730,617
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G |
Ptprb |
protein tyrosine phosphatase receptor type B |
treatment |
ISO |
human cells in mouse model protein:increased expression:brain (human) |
RGD |
PMID:14692702 PMID:15831233 PMID:16489031 |
RGD:151660504 RGD:151660507 RGD:151664746 |
NCBI chrNW_004936545:8,150,766...8,235,674
Ensembl chrNW_004936545:8,147,291...8,235,715
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G |
Rb1 |
RB transcriptional corepressor 1 |
severity |
ISO |
DNA:hypermethylation:promoter: |
RGD |
PMID:11204276 |
RGD:13782067 |
NCBI chrNW_004936565:1,596,227...1,746,706
Ensembl chrNW_004936565:1,597,593...1,746,846
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G |
Reck |
reversion inducing cysteine rich protein with kazal motifs |
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ISO |
CTD Direct Evidence: therapeutic |
CTD |
PMID:20127710 |
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NCBI chrNW_004936524:4,021,666...4,099,703
Ensembl chrNW_004936524:4,021,660...4,099,705
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G |
Rpl35a |
ribosomal protein L35a |
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ISO |
mRNA:increased expression:brain (human) |
RGD |
PMID:10880769 |
RGD:11535077 |
NCBI chrNW_004936784:167,623...171,962
Ensembl chrNW_004936784:167,775...171,854
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G |
Rpl5 |
ribosomal protein L5 |
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ISO |
DNA:mutations:multiple (human) |
RGD |
PMID:26892688 |
RGD:11535147 |
NCBI chrNW_004936537:6,341,961...6,344,831
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G |
Runx3 |
RUNX family transcription factor 3 |
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ISO |
CTD Direct Evidence: marker/mechanism |
CTD |
PMID:16909125 |
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NCBI chrNW_004936474:9,751,946...9,802,910
Ensembl chrNW_004936474:9,751,946...9,802,910
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G |
Septin14 |
septin 14 |
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ISO |
CTD Direct Evidence: marker/mechanism |
CTD |
PMID:23917401 |
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NCBI chrNW_004936543:7,998,207...8,033,877
Ensembl chrNW_004936543:8,002,291...8,033,877
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G |
Serping1 |
serpin family G member 1 |
treatment |
ISO |
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RGD |
PMID:28880870 |
RGD:13525003 |
NCBI chrNW_004936581:4,911,403...4,924,484
Ensembl chrNW_004936581:4,908,458...4,924,645
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G |
Slc7a5 |
solute carrier family 7 member 5 |
disease_progression |
ISO |
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RGD |
PMID:16496379 |
RGD:151361115 |
NCBI chrNW_004936641:1,513,110...1,538,955
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G |
Slx4 |
SLX4 structure-specific endonuclease subunit |
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ISO |
ClinVar Annotator: match by term: Glioblastoma multiforme |
ClinVar |
PMID:25741868 |
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NCBI chrNW_004936694:720,585...744,477
Ensembl chrNW_004936694:722,481...744,600
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G |
Srrt |
serrate, RNA effector molecule |
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ISO |
CTD Direct Evidence: marker/mechanism |
CTD |
PMID:30542699 |
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NCBI chrNW_004936543:843,144...855,491
Ensembl chrNW_004936543:843,164...855,491
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G |
Stat3 |
signal transducer and activator of transcription 3 |
disease_progression |
ISO |
mRNA, protein:increased expression:brain (human) |
RGD |
PMID:31783691 |
RGD:151667907 |
NCBI chrNW_004936490:17,119,189...17,178,402
Ensembl chrNW_004936490:17,117,290...17,178,402
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G |
Suz12 |
SUZ12 polycomb repressive complex 2 subunit |
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ISO |
CTD Direct Evidence: marker/mechanism |
CTD |
PMID:25119042 |
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NCBI chrNW_004936538:2,921,987...2,971,521
Ensembl chrNW_004936538:2,921,719...2,971,552
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G |
Tes |
testin LIM domain protein |
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ISO |
CTD Direct Evidence: marker/mechanism |
CTD |
PMID:16909125 |
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NCBI chrNW_004936589:2,755,905...2,796,244
Ensembl chrNW_004936589:2,755,903...2,796,308
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G |
Tgm2 |
transglutaminase 2 |
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ISO |
CTD Direct Evidence: marker/mechanism|therapeutic |
CTD |
PMID:16170020 PMID:17099729 |
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NCBI chrNW_004936561:3,178,244...3,207,551
Ensembl chrNW_004936561:3,178,293...3,207,561
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G |
Tmem135 |
transmembrane protein 135 |
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ISO |
CTD Direct Evidence: marker/mechanism |
CTD |
PMID:30705370 |
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NCBI chrNW_004936736:1,986,361...2,113,455
Ensembl chrNW_004936736:1,978,110...2,113,451
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G |
Tnc |
tenascin C |
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ISO |
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RGD |
PMID:16928692 |
RGD:4889612 |
NCBI chrNW_004936487:4,172,263...4,256,780
Ensembl chrNW_004936487:4,172,886...4,233,126
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G |
Tnfsf10 |
TNF superfamily member 10 |
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ISO |
CTD Direct Evidence: therapeutic |
CTD |
PMID:21877938 |
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NCBI chrNW_004936593:212,642...230,645
Ensembl chrNW_004936593:212,532...230,651
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G |
Tp53 |
tumor protein p53 |
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ISO |
ClinVar Annotator: match by term: Glioblastoma, somatic |
ClinVar |
PMID:1467311 PMID:1565143 PMID:1565144 PMID:1591732 PMID:1631137 PMID:1683921 PMID:1975675 PMID:1978757 PMID:1999338 PMID:2046748 PMID:2750177 PMID:2932480 PMID:4122735 PMID:7565304 PMID:7732013 PMID:7783166 PMID:7887414 PMID:8023157 PMID:8062826 PMID:8118819 PMID:8164043 PMID:8242752 PMID:8423216 PMID:8425176 PMID:8479749 PMID:8550239 PMID:8718514 PMID:8825920 PMID:9047394 PMID:9218725 PMID:9242456 PMID:9364015 PMID:9399838 PMID:9446663 PMID:9536098 PMID:9546439 PMID:9582268 PMID:9607760 PMID:9627118 PMID:9662334 PMID:9667734 PMID:9681828 PMID:9704930 PMID:9704931 PMID:9891044 PMID:10229196 PMID:10411893 PMID:10432928 PMID:10486318 PMID:10519380 PMID:10589545 PMID:10797439 PMID:10802655 PMID:10864200 PMID:10922393 PMID:11139324 PMID:11180592 PMID:11370630 PMID:11403041 PMID:11420676 PMID:11479205 PMID:11481490 PMID:11521785 PMID:11600572 PMID:11753428 PMID:11782540 PMID:12007217 PMID:12019170 PMID:12567188 PMID:12619118 PMID:12672316 PMID:12826609 PMID:12885464 PMID:12917626 PMID:14743206 PMID:15037740 PMID:15121773 PMID:15355915 PMID:15381368 PMID:15390294 PMID:15607980 PMID:15607981 PMID:15722483 PMID:15741269 PMID:15781620 PMID:15925506 PMID:15951970 PMID:15977174 PMID:16033918 PMID:16199549 PMID:16258005 PMID:16401470 PMID:16489069 PMID:16494995 PMID:16551709 PMID:16682957 PMID:16750598 PMID:16818505 PMID:16861262 PMID:16933305 PMID:16964264 PMID:16969106 PMID:17015838 PMID:17308077 PMID:17311302 PMID:17535973 PMID:17540308 PMID:17567834 PMID:17576681 PMID:17599946 PMID:17606709 PMID:17636407 PMID:17638920 PMID:17940213 PMID:18248785 PMID:18270399 PMID:18307025 PMID:18373486 PMID:18511570 PMID:18685109 PMID:18940924 PMID:19046423 PMID:19101993 PMID:19127115 PMID:19367569 PMID:19454241 PMID:19521721 PMID:19556618 PMID:19711436 PMID:19714490 PMID:19717094 PMID:19877175 PMID:19881536 PMID:20028212 PMID:20113312 PMID:20127978 PMID:20128691 PMID:20301488 PMID:20407015 PMID:20436704 PMID:20455025 PMID:20516128 PMID:20520810 PMID:20522432 PMID:20593220 PMID:20689556 PMID:20693561 PMID:20805372 PMID:21118481 PMID:21187651 PMID:21192060 PMID:21305319 PMID:21343334 PMID:21348412 PMID:21356188 PMID:21440489 PMID:21445056 PMID:21445348 PMID:21464421 PMID:21468523 PMID:21484931 PMID:21519010 PMID:21535297 PMID:21552135 PMID:21601526 PMID:21619694 PMID:21630152 PMID:21665182 PMID:21665242 PMID:21672450 PMID:21761402 PMID:22004116 PMID:22006311 PMID:22110706 PMID:22170717 PMID:22186996 PMID:22233476 PMID:22455664 PMID:22619358 PMID:22703879 PMID:22729912 PMID:22744426 PMID:22811390 PMID:22822097 PMID:22869713 PMID:22915647 PMID:22923379 PMID:23056559 PMID:23161690 PMID:23172776 PMID:23175693 PMID:23246812 PMID:23259501 PMID:23263379 PMID:23469205 PMID:23484829 PMID:23538418 PMID:23570263 PMID:23624782 PMID:23630318 PMID:23639312 PMID:23733769 PMID:23792586 PMID:23794094 PMID:23887774 PMID:23894400 PMID:24033266 PMID:24065105 PMID:24076587 PMID:24122735 PMID:24382691 PMID:24501221 PMID:24573247 PMID:24590827 PMID:24651012 PMID:24677579 PMID:24702488 PMID:24728327 PMID:24764719 PMID:24810334 PMID:24835218 PMID:24884479 PMID:24936644 PMID:25059482 PMID:25256166 PMID:25326637 PMID:25404506 PMID:25525159 PMID:25584008 PMID:25612911 PMID:25736369 PMID:25741868 PMID:25765855 PMID:25773284 PMID:25787918 PMID:25896519 PMID:25945745 PMID:25952993 PMID:26014290 PMID:26205489 PMID:26225655 PMID:26230955 PMID:26332594 PMID:26425688 PMID:26452166 PMID:26467025 PMID:26572807 PMID:26580448 PMID:26585234 PMID:26681051 PMID:26681312 PMID:26681682 PMID:26718964 PMID:26786923 PMID:26822237 PMID:26845104 PMID:26911350 PMID:27022024 PMID:27081505 PMID:27101110 PMID:27146902 PMID:27153395 PMID:27223487 PMID:27276561 PMID:27328919 PMID:27374712 PMID:27463065 PMID:27501770 PMID:27516001 PMID:27601191 PMID:27621308 PMID:27663983 PMID:27680515 PMID:27683180 PMID:27714481 PMID:27895058 PMID:27959731 PMID:27993330 PMID:28152038 PMID:28154273 PMID:28349240 PMID:28369373 PMID:28387921 PMID:28453743 PMID:28453760 PMID:28472496 PMID:28492532 PMID:28573494 PMID:28664506 PMID:28724667 PMID:28756477 PMID:28861920 PMID:28864397 PMID:28873162 PMID:28968711 PMID:28984303 PMID:29070607 PMID:29300620 PMID:29324801 PMID:29392648 PMID:29478780 PMID:29489754 PMID:29522266 PMID:29922827 PMID:29956451 PMID:29979965 PMID:30042151 PMID:30076369 PMID:30092803 PMID:30107858 PMID:30147334 PMID:30224644 PMID:30287823 PMID:30327374 PMID:30352134 PMID:30588330 PMID:30596752 PMID:30816478 PMID:30840781 PMID:30982232 PMID:31081129 PMID:31105275 PMID:31321604 PMID:31494577 PMID:31567591 PMID:31742824 PMID:31744167 PMID:31748977 PMID:31775759 PMID:31882575 PMID:31978118 PMID:31983162 PMID:32000721 PMID:32039725 PMID:32156018 PMID:32292755 PMID:32295079 PMID:32427313 PMID:32592449 PMID:32658383 PMID:32671623 PMID:32817165 PMID:32832836 PMID:32888145 PMID:32906206 PMID:32986223 PMID:33163847 PMID:33245408 PMID:33257846 PMID:33258288 PMID:33300245 PMID:33372952 PMID:33471991 PMID:33603772 PMID:33637564 PMID:33840814 PMID:34088725 PMID:34240179 PMID:34299313 PMID:34503094 PMID:34529667 PMID:34540492 PMID:34670578 PMID:34709361 PMID:34885220 PMID:35043155 PMID:35367578 PMID:35802772 PMID:35974385 PMID:36003761 PMID:36008825 PMID:36309086 PMID:36329109 PMID:36988593 More...
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NCBI chrNW_004936595:919,807...935,367
Ensembl chrNW_004936595:919,428...925,425
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G |
Tp53bp1 |
tumor protein p53 binding protein 1 |
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ISO |
CTD Direct Evidence: marker/mechanism |
CTD |
PMID:30705370 |
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NCBI chrNW_004936471:6,589,395...6,668,242
Ensembl chrNW_004936471:6,589,564...6,668,305
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G |
Trmt11 |
tRNA methyltransferase 11 homolog |
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ISO |
CTD Direct Evidence: marker/mechanism |
CTD |
PMID:30705370 |
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NCBI chrNW_004936639:3,442,026...3,494,303
Ensembl chrNW_004936639:3,440,703...3,494,362
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G |
Vegfa |
vascular endothelial growth factor A |
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ISO |
CTD Direct Evidence: marker/mechanism |
CTD |
PMID:16356833 |
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NCBI chrNW_004936476:16,245,134...16,261,180
Ensembl chrNW_004936476:16,247,100...16,260,673
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G |
Wt1 |
WT1 transcription factor |
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ISO |
CTD Direct Evidence: marker/mechanism |
CTD |
PMID:20820871 |
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NCBI chrNW_004936533:5,411,949...5,459,693
Ensembl chrNW_004936533:5,411,848...5,459,693
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G |
Xrcc1 |
X-ray repair cross complementing 1 |
susceptibility |
ISO |
DNA:SNP:exon 10: p.R399Q (human) |
RGD |
PMID:18330515 |
RGD:401827274 |
NCBI chrNW_004936706:752,571...783,746
Ensembl chrNW_004936706:751,108...783,777
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G |
Zbtb7a |
zinc finger and BTB domain containing 7A |
|
ISO |
CTD Direct Evidence: marker/mechanism |
CTD |
PMID:25875864 |
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NCBI chrNW_004936588:2,310,975...2,321,790
Ensembl chrNW_004936588:2,311,727...2,321,372
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G |
Rb1 |
RB transcriptional corepressor 1 |
|
ISO |
RNA:decreased expression:brain: |
RGD |
PMID:22157621 |
RGD:13782062 |
NCBI chrNW_004936565:1,596,227...1,746,706
Ensembl chrNW_004936565:1,597,593...1,746,846
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G |
LOC101965545 |
NADPH--cytochrome P450 reductase |
|
ISO |
CTD Direct Evidence: therapeutic |
CTD |
PMID:9766669 |
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NCBI chrNW_004936543:2,275,981...2,327,931
Ensembl chrNW_004936543:2,274,059...2,328,008
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G |
Plau |
plasminogen activator, urokinase |
severity |
ISO |
mouse gene in rat model |
RGD |
PMID:20606645 |
RGD:7241591 |
NCBI chrNW_004936521:5,238,128...5,243,829
Ensembl chrNW_004936521:5,238,093...5,243,877
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G |
Ptgs1 |
prostaglandin-endoperoxide synthase 1 |
|
ISO |
protein:increased expression:microglia, macrophage, |
RGD |
PMID:10229132 |
RGD:5688250 |
NCBI chrNW_004936487:10,745,465...10,758,812
Ensembl chrNW_004936487:10,745,327...10,758,823
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G |
Ptgs2 |
prostaglandin-endoperoxide synthase 2 |
|
ISO |
protein:increased expression:endothelial cell |
RGD |
PMID:10229132 |
RGD:5688250 |
NCBI chrNW_004936481:3,821,564...3,828,086
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G |
Vegfa |
vascular endothelial growth factor A |
|
ISO |
CTD Direct Evidence: marker/mechanism |
CTD |
PMID:16533777 |
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NCBI chrNW_004936476:16,245,134...16,261,180
Ensembl chrNW_004936476:16,247,100...16,260,673
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G |
Glmn |
glomulin, FKBP associated protein |
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ISO |
ClinVar Annotator: match by term: Glomuvenous malformation | ClinVar Annotator: match by term: Glomuvenous malformations |
OMIM ClinVar |
PMID:11175297 PMID:11845407 PMID:15689436 PMID:23375657 PMID:23801931 PMID:24033266 PMID:25741868 PMID:28492532 PMID:30460983 PMID:31483481 More...
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NCBI chrNW_004936537:6,778,317...6,827,384
Ensembl chrNW_004936537:6,777,965...6,829,881
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G |
Glmn |
glomulin, FKBP associated protein |
|
ISO |
glomuvenous malformations |
RGD |
PMID:11845407 |
RGD:1598992 |
NCBI chrNW_004936537:6,778,317...6,827,384
Ensembl chrNW_004936537:6,777,965...6,829,881
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G |
Dll4 |
delta like canonical Notch ligand 4 |
|
ISO |
mRNA,protein:increased expression:anterior temporal lobe |
RGD |
PMID:26951238 |
RGD:155663351 |
NCBI chrNW_004936471:4,320,235...4,330,251
Ensembl chrNW_004936471:4,320,933...4,330,253
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G |
Ephb4 |
EPH receptor B4 |
|
ISO |
mRNA,protein:decreased expression:anterior temporal lobe |
RGD |
PMID:26951238 |
RGD:155663351 |
NCBI chrNW_004936543:794,837...811,637
Ensembl chrNW_004936543:794,725...811,637
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G |
Hes1 |
hes family bHLH transcription factor 1 |
|
ISO |
mRNA:increased expression:anterior temporal lobe |
RGD |
PMID:26951238 |
RGD:155663351 |
NCBI chrNW_004936711:640,002...642,580
Ensembl chrNW_004936711:639,905...642,622
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G |
Hey1 |
hes related family bHLH transcription factor with YRPW motif 1 |
|
ISO |
mRNA,protein:increased expression:anterior temporal lobe |
RGD |
PMID:26951238 |
RGD:155663351 |
NCBI chrNW_004936871:666,961...670,910
Ensembl chrNW_004936871:666,938...670,916
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G |
Hey2 |
hes related family bHLH transcription factor with YRPW motif 2 |
|
ISO |
mRNA:increased expression:anterior temporal lobe |
RGD |
PMID:26951238 |
RGD:155663351 |
NCBI chrNW_004936639:3,705,225...3,714,696
Ensembl chrNW_004936639:3,703,447...3,716,820
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G |
Kdr |
kinase insert domain receptor |
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ISO |
mRNA:increased expression:anterior temporal lobe |
RGD |
PMID:26951238 |
RGD:155663351 |
NCBI chrNW_004936482:17,537,697...17,581,320
Ensembl chrNW_004936482:17,538,864...17,581,002
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G |
Notch1 |
notch receptor 1 |
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ISO |
mRNA,protein:increased expression:anterior temporal lobe |
RGD |
PMID:26951238 |
RGD:155663351 |
NCBI chrNW_004936669:1,292,016...1,334,061
Ensembl chrNW_004936669:1,292,088...1,332,428
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G |
Notch4 |
notch receptor 4 |
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ISO |
mRNA,protein:increased expression:anterior temporal lobe |
RGD |
PMID:26951238 |
RGD:155663351 |
NCBI chrNW_004936727:1,386,842...1,409,823
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G |
Pten |
phosphatase and tensin homolog |
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ISO |
protein:decreased expression:anterior temporal lobe |
RGD |
PMID:26951238 |
RGD:155663351 |
NCBI chrNW_004936735:1,252,414...1,338,318
Ensembl chrNW_004936735:1,252,414...1,338,323
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G |
Tsc2 |
TSC complex subunit 2 |
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ISO |
associated with tuberous sclerosis;DNA:mutations:multiple |
RGD |
PMID:22251200 PMID:29512829 |
RGD:21079730 RGD:21079732 |
NCBI chrNW_004936694:1,958,152...1,993,373
Ensembl chrNW_004936694:1,958,154...1,993,363
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G |
Palb2 |
partner and localizer of BRCA2 |
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ISO |
ClinVar Annotator: match by term: Malignant ependymoma |
ClinVar |
PMID:21285249 PMID:25085752 PMID:25741868 PMID:26315354 PMID:26467025 PMID:26580448 PMID:26689913 PMID:27616075 PMID:28492532 PMID:28678401 PMID:31636395 PMID:33471991 More...
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NCBI chrNW_004936501:8,246,927...8,273,258
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G |
Acvr1 |
activin A receptor type 1 |
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ISO |
CTD Direct Evidence: marker/mechanism |
CTD |
PMID:24705251 PMID:24705252 PMID:24705254 |
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NCBI chrNW_004936469:20,743,195...20,811,567
Ensembl chrNW_004936469:20,743,213...20,811,569
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G |
Adgra2 |
adhesion G protein-coupled receptor A2 |
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ISO |
ClinVar Annotator: match by term: Ependymoma |
ClinVar |
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NCBI chrNW_004936710:1,258,088...1,296,346
Ensembl chrNW_004936710:1,257,931...1,298,885
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G |
Akt2 |
AKT serine/threonine kinase 2 |
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ISO |
protein:increased expression:cytoplasm (human) |
RGD |
PMID:19330838 |
RGD:2313297 |
NCBI chrNW_004936661:2,652,568...2,694,039
Ensembl chrNW_004936661:2,652,566...2,694,086
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G |
Amotl1 |
angiomotin like 1 |
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ISO |
CTD Direct Evidence: marker/mechanism |
CTD |
PMID:34480788 |
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NCBI chrNW_004936674:163,889...285,523
Ensembl chrNW_004936674:156,552...223,685
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G |
Angpt2 |
angiopoietin 2 |
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ISO |
protein:increased expression:brain (rat) |
RGD |
PMID:18615861 |
RGD:2314189 |
NCBI chrNW_004936615:4,472,261...4,524,537
Ensembl chrNW_004936615:4,472,247...4,524,556
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G |
Apc |
APC regulator of WNT signaling pathway |
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ISO |
ClinVar Annotator: match by term: Malignant glioma |
ClinVar |
PMID:25741868 |
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NCBI chrNW_004936531:6,899,580...7,019,016
Ensembl chrNW_004936531:6,899,788...7,019,453
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G |
Apod |
apolipoprotein D |
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ISO |
CTD Direct Evidence: marker/mechanism |
CTD |
PMID:16865689 |
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NCBI chrNW_004936833:260,798...277,060
Ensembl chrNW_004936833:259,660...277,246
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G |
Araf |
A-Raf proto-oncogene, serine/threonine kinase |
disease_progression |
ISO |
|
RGD |
PMID:27852048 |
RGD:13702476 |
NCBI chrNW_004936502:13,323,365...13,335,003
Ensembl chrNW_004936502:13,323,355...13,335,224
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G |
Areg |
amphiregulin |
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ISO |
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RGD |
PMID:8621257 |
RGD:2292668 |
NCBI chrNW_004936598:1,276,599...1,283,612
Ensembl chrNW_004936598:1,274,565...1,283,746
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G |
Arhgap32 |
Rho GTPase activating protein 32 |
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ISO |
ClinVar Annotator: match by term: Ependymoma |
ClinVar |
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NCBI chrNW_004936572:3,100,695...3,293,077
Ensembl chrNW_004936572:3,118,670...3,294,109
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G |
Arid1b |
AT-rich interaction domain 1B |
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ISO |
ClinVar Annotator: match by term: Astrocytoma |
ClinVar |
PMID:25741868 |
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NCBI chrNW_004936489:8,811,094...9,202,423
Ensembl chrNW_004936489:9,087,697...9,205,203
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G |
Aspm |
assembly factor for spindle microtubules |
disease_progression |
ISO |
mRNA:increased expression:brain: |
RGD |
PMID:20142996 |
RGD:13442488 |
NCBI chrNW_004936567:6,653,382...6,701,856
Ensembl chrNW_004936567:6,653,728...6,701,752
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G |
Atf5 |
activating transcription factor 5 |
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ISO |
CTD Direct Evidence: marker/mechanism |
CTD |
PMID:28861715 |
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NCBI chrNW_004936664:3,713,527...3,717,824
Ensembl chrNW_004936664:3,713,527...3,717,824
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G |
Atg7 |
autophagy related 7 |
treatment |
ISO |
|
RGD |
PMID:25542083 |
RGD:11557994 |
NCBI chrNW_004936602:1,938,720...2,179,239
Ensembl chrNW_004936602:1,935,507...2,179,256
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G |
Atm |
ATM serine/threonine kinase |
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ISO |
ClinVar Annotator: match by term: Malignant glioma |
ClinVar |
PMID:8659541 PMID:8808599 PMID:9000145 PMID:9463314 PMID:10330348 PMID:10817650 PMID:10980530 PMID:11298136 PMID:12552559 PMID:21445571 PMID:21459046 PMID:21792198 PMID:25741868 PMID:26681312 PMID:28492532 PMID:29478780 PMID:30549301 PMID:33471991 More...
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NCBI chrNW_004936551:359,134...534,672
Ensembl chrNW_004936551:359,362...532,211
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G |
Atp1b2 |
ATPase Na+/K+ transporting subunit beta 2 |
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ISO |
CTD Direct Evidence: marker/mechanism |
CTD |
PMID:16865689 |
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NCBI chrNW_004936595:908,019...914,426
Ensembl chrNW_004936595:907,919...915,053
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G |
Atrx |
ATRX chromatin remodeler |
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ISO |
DNA:mutations: :multiple CTD Direct Evidence: marker/mechanism |
RGD CTD |
PMID:23104868 PMID:23583981 PMID:24705251 |
RGD:11040587 |
NCBI chrNW_004936683:2,496,307...2,718,539
Ensembl chrNW_004936683:2,495,959...2,718,620
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G |
Bad |
BCL2 associated agonist of cell death |
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ISO |
protein:increased phosphorylation:brain (rat) |
RGD |
PMID:16944316 |
RGD:2292675 |
NCBI chrNW_004936599:4,924,349...4,933,683
Ensembl chrNW_004936599:4,924,789...4,933,368
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G |
Banp |
BTG3 associated nuclear protein |
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ISO |
ClinVar Annotator: match by term: Ependymoma |
ClinVar |
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NCBI chrNW_004936641:1,386,592...1,472,750
Ensembl chrNW_004936641:1,387,102...1,472,803
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G |
Bap1 |
BRCA1 associated deubiquitinase 1 |
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ISO |
ClinVar Annotator: match by term: Astrocytoma |
ClinVar |
PMID:25741868 |
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NCBI chrNW_004936473:3,239,009...3,247,806
Ensembl chrNW_004936473:3,239,010...3,247,806
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G |
Barhl1 |
BarH like homeobox 1 |
|
ISO |
protein:increased expression:brain: |
RGD |
PMID:28956815 |
RGD:14390165 |
NCBI chrNW_004936487:19,112,479...19,119,677
Ensembl chrNW_004936487:19,111,726...19,119,677
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G |
Bcan |
brevican |
severity |
ISO |
protein:increased expression:brain: |
RGD |
PMID:11585735 PMID:12799382 PMID:16061654 PMID:23253190 |
RGD:14392782 RGD:14392783 RGD:14392797 RGD:14392804 |
NCBI chrNW_004936580:5,816,196...5,828,531
Ensembl chrNW_004936580:5,816,359...5,828,126
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G |
Bdkrb2 |
bradykinin receptor B2 |
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ISO |
mRNA:increased expression:brain |
RGD |
PMID:20080302 |
RGD:4891047 |
NCBI chrNW_004936604:548,844...551,031
Ensembl chrNW_004936604:548,847...549,956
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G |
Birc5 |
baculoviral IAP repeat containing 5 |
|
ISO |
protein:increased expression:brain |
RGD |
PMID:17701349 |
RGD:2293131 |
NCBI chrNW_004936594:2,812,165...2,820,618
Ensembl chrNW_004936594:2,812,238...2,820,636
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G |
Bmi1 |
BMI1 proto-oncogene, polycomb ring finger |
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ISO |
CTD Direct Evidence: marker/mechanism |
CTD |
PMID:23383216 |
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NCBI chrNW_004936520:5,707,542...5,716,966
Ensembl chrNW_004936520:5,707,778...5,717,024
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G |
Braf |
B-Raf proto-oncogene, serine/threonine kinase |
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ISO |
CTD Direct Evidence: marker/mechanism |
CTD |
PMID:23583981 |
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NCBI chrNW_004936592:4,728,371...4,833,830
Ensembl chrNW_004936592:4,737,011...4,834,664
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G |
Brca2 |
BRCA2 DNA repair associated |
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ISO |
ClinVar Annotator: match by term: Glioma susceptibility 1 | ClinVar Annotator: match by term: Glioma susceptibility 3 | ClinVar Annotator: match by term: Glioma susceptibility 9 ClinVar Annotator: match by term: Brainstem glioma | ClinVar Annotator: match by term: Glioma susceptibility 3 | ClinVar Annotator: match by term: Glioma susceptibility 9 | ClinVar Annotator: match by term: Malignant glioma ClinVar Annotator: match by term: Brainstem glioma | ClinVar Annotator: match by term: Glioma susceptibility 1 | ClinVar Annotator: match by term: Glioma susceptibility 3 | ClinVar Annotator: match by term: Glioma susceptibility 9 |
ClinVar OMIM |
PMID:186727 PMID:251866 PMID:278235 PMID:1772447 PMID:2200631 PMID:2661312 PMID:8524414 PMID:8589730 PMID:8665505 PMID:8673090 PMID:8988179 PMID:9012404 PMID:9150152 PMID:9150154 PMID:9150172 PMID:9150174 PMID:9361038 PMID:9536098 PMID:9585613 PMID:9667259 PMID:9771877 PMID:9792861 PMID:9971877 PMID:10359546 PMID:10399947 PMID:10464609 PMID:10570174 PMID:10638982 PMID:10644434 PMID:10660329 PMID:10682686 PMID:10699917 PMID:10717622 PMID:10790213 PMID:10874312 PMID:10923033 PMID:10978364 PMID:11030417 PMID:11030418 PMID:11039575 PMID:11062481 PMID:11149425 PMID:11158174 PMID:11179017 PMID:11207042 PMID:11251181 PMID:11307153 PMID:11389159 PMID:11400546 PMID:11504767 PMID:11556836 PMID:11597388 PMID:11754111 PMID:11802209 PMID:11843247 PMID:11857748 PMID:11897832 PMID:11927503 PMID:11929857 PMID:11938448 PMID:12065746 PMID:12097290 PMID:12142080 PMID:12181777 PMID:12204006 PMID:12215251 PMID:12228710 PMID:12373604 PMID:12442275 PMID:12474142 PMID:12491487 PMID:12556369 PMID:12569143 PMID:12655567 PMID:12698193 PMID:12750261 PMID:12845657 PMID:12920083 PMID:12955716 PMID:12960223 PMID:14555511 PMID:14559878 PMID:14647210 PMID:14647438 PMID:14670928 PMID:14732925 PMID:14973102 PMID:15024741 PMID:15026808 PMID:15070707 PMID:15117986 PMID:15131399 PMID:15146557 PMID:15168169 PMID:15235023 PMID:15290653 PMID:15317758 PMID:15340362 PMID:15382066 PMID:15533909 PMID:15548363 PMID:15635067 PMID:15689453 PMID:15695382 PMID:15744044 PMID:15766593 PMID:15800311 PMID:15876480 PMID:15887246 PMID:15889636 PMID:15955690 PMID:15983021 PMID:16030099 PMID:16115142 PMID:16168118 PMID:16168123 PMID:16199547 PMID:16205630 PMID:16234499 PMID:16284991 PMID:16389418 PMID:16455195 PMID:16489001 PMID:16683254 PMID:16758124 PMID:16760289 PMID:16792514 PMID:16825431 PMID:16847550 PMID:16905680 PMID:16912212 PMID:16920162 PMID:16931905 PMID:16978908 PMID:17011978 PMID:17063270 PMID:17100994 PMID:17148771 PMID:17262179 PMID:17301269 PMID:17341484 PMID:17453335 PMID:17513806 PMID:17574839 PMID:17576681 PMID:17636422 PMID:17688236 PMID:17724471 PMID:17767707 PMID:17851763 PMID:17899372 PMID:17924331 PMID:17925560 PMID:17972171 PMID:18042939 PMID:18182994 PMID:18284688 PMID:18286383 PMID:18375895 PMID:18393245 PMID:18424508 PMID:18445692 PMID:18446624 PMID:18451181 PMID:18465347 PMID:18489799 PMID:18497862 PMID:18547621 PMID:18563556 PMID:18607349 PMID:18627636 PMID:18694767 PMID:18703817 PMID:18704680 PMID:18724707 PMID:18752448 PMID:18779604 PMID:18819001 PMID:18821011 PMID:18844490 PMID:18951461 PMID:19016756 PMID:19043619 PMID:19052777 PMID:19200354 PMID:19241424 PMID:19353265 PMID:19491284 PMID:19499246 PMID:19530235 PMID:19574032 PMID:19620486 PMID:19654294 PMID:19656164 PMID:19656415 PMID:19796187 PMID:19799798 PMID:19861517 PMID:19863560 PMID:19912264 PMID:19941162 PMID:19941167 PMID:19949876 PMID:19967274 PMID:20033483 PMID:20104584 PMID:20135345 PMID:20167696 PMID:20215541 PMID:20373018 PMID:20383589 PMID:20406929 PMID:20608899 PMID:20616022 PMID:20694749 PMID:20736950 PMID:20807450 PMID:20815029 PMID:20858050 PMID:20960228 PMID:21120943 PMID:21138478 PMID:21203900 PMID:21205087 PMID:21232165 PMID:21324516 PMID:21356067 PMID:21394826 PMID:21465317 PMID:21497495 PMID:21508395 PMID:21520273 PMID:21520333 PMID:21523855 PMID:21548014 PMID:21559243 PMID:21598239 PMID:21638052 PMID:21643751 PMID:21673748 PMID:21702907 PMID:21709188 PMID:21719596 PMID:21720365 PMID:21735045 PMID:21741379 PMID:21913181 PMID:21918853 PMID:21952622 PMID:21990134 PMID:21990165 PMID:22006311 PMID:22009639 PMID:22034289 PMID:22072316 PMID:22085629 PMID:22109874 PMID:22144684 PMID:22194698 PMID:22217648 PMID:22382806 PMID:22399190 PMID:22425665 PMID:22426013 PMID:22430266 PMID:22460208 PMID:22476429 PMID:22486713 PMID:22505045 PMID:22535016 PMID:22632462 PMID:22666503 PMID:22678057 PMID:22682623 PMID:22684231 PMID:22703879 PMID:22711857 PMID:22752604 PMID:22762150 PMID:22798144 PMID:22848303 PMID:22866093 PMID:22875147 PMID:22895246 PMID:22923021 PMID:22970155 PMID:22995991 PMID:23028338 PMID:23035815 PMID:23096105 PMID:23096355 PMID:23108138 PMID:23110154 PMID:23146383 PMID:23199084 PMID:23231788 PMID:23233716 PMID:23318356 PMID:23320992 PMID:23415752 PMID:23451180 PMID:23469205 PMID:23479189 PMID:23569310 PMID:23569316 PMID:23613520 PMID:23621881 PMID:23633455 PMID:23683081 PMID:23725378 PMID:23767878 PMID:23884708 PMID:23929434 PMID:23940062 PMID:23942203 PMID:23961350 PMID:23977390 PMID:24010542 PMID:24013206 PMID:24033266 PMID:24052750 PMID:24055113 PMID:24123850 PMID:24141157 PMID:24156927 PMID:24212087 PMID:24249303 PMID:24301060 PMID:24312913 PMID:24323938 PMID:24333842 PMID:24372583 PMID:24504028 PMID:24528374 PMID:24549055 PMID:24556621 PMID:24607278 PMID:24618965 PMID:24728189 PMID:24728327 PMID:24735155 PMID:24737347 PMID:24814045 PMID:24817641 PMID:24830819 PMID:24884479 PMID:24916970 PMID:25007954 PMID:25066507 PMID:25085752 PMID:25136594 PMID:25146914 PMID:25186627 PMID:25233892 PMID:25236687 PMID:25256924 PMID:25274553 PMID:25330149 PMID:25348012 PMID:25371446 PMID:25382762 PMID:25395318 PMID:25428789 PMID:25447315 PMID:25452441 PMID:25476495 PMID:25479140 PMID:25480878 PMID:25525159 PMID:25556971 PMID:25583207 PMID:25628955 PMID:25637381 PMID:25639900 PMID:25682074 PMID:25685387 PMID:25716084 PMID:25737278 PMID:25741868 PMID:25782689 PMID:25802882 PMID:25863477 PMID:25877891 PMID:25884701 PMID:25927356 PMID:25948282 PMID:26014432 PMID:26022348 PMID:26026974 PMID:26046366 PMID:26064523 PMID:26145171 PMID:26187060 PMID:26207792 PMID:26219728 PMID:26250392 PMID:26287763 PMID:26295337 PMID:26300996 PMID:26306726 PMID:26360800 PMID:26425718 PMID:26436112 PMID:26439132 PMID:26467025 PMID:26541979 PMID:26543556 PMID:26556299 PMID:26566862 PMID:26576347 PMID:26580448 PMID:26586665 PMID:26657402 PMID:26681312 PMID:26687385 PMID:26689913 PMID:26709275 PMID:26724258 PMID:26733283 PMID:26757417 PMID:26786923 PMID:26787237 PMID:26834852 PMID:26845104 PMID:26852015 PMID:26933808 PMID:26968956 PMID:27000661 PMID:27060066 PMID:27062684 PMID:27124784 PMID:27153395 PMID:27157322 PMID:27165126 PMID:27194814 PMID:27225637 PMID:27257965 PMID:27271530 PMID:27376475 PMID:27425403 PMID:27433846 PMID:27456091 PMID:27469594 PMID:27495310 PMID:27535533 PMID:27553368 PMID:27616075 PMID:27732944 PMID:27741520 PMID:27767231 PMID:27831900 PMID:27836010 PMID:27882536 PMID:27989354 PMID:28008555 PMID:28039656 PMID:28049253 PMID:28111427 PMID:28127413 PMID:28176296 PMID:28179634 PMID:28195393 PMID:28205045 PMID:28243543 PMID:28281021 PMID:28283652 PMID:28284943 PMID:28294317 PMID:28324225 PMID:28339459 PMID:28346442 PMID:28349240 PMID:28423363 PMID:28476184 PMID:28477318 PMID:28486781 PMID:28492532 PMID:28503720 PMID:28541631 PMID:28616458 PMID:28657667 PMID:28664506 PMID:28680148 PMID:28692638 PMID:28715532 PMID:28724667 PMID:28726806 PMID:28726808 PMID:28767289 PMID:28782087 PMID:28802053 PMID:28825054 PMID:28831036 PMID:28888541 PMID:28905878 PMID:28915716 PMID:28918466 PMID:28973083 PMID:28993434 PMID:29020732 PMID:29053726 PMID:29061375 PMID:29084914 PMID:29088781 PMID:29161300 PMID:29176636 PMID:29192238 PMID:29202330 PMID:29215753 PMID:29263802 PMID:29310832 PMID:29321669 PMID:29325860 PMID:29335924 PMID:29335925 PMID:29339979 PMID:29348823 PMID:29360161 PMID:29368341 PMID:29371908 PMID:29383094 PMID:29394989 PMID:29395620 PMID:29433453 PMID:29435039 PMID:29446198 PMID:29470806 PMID:29478780 PMID:29483665 PMID:29489754 PMID:29492181 PMID:29506128 PMID:29566657 PMID:29625052 PMID:29752822 PMID:29753700 PMID:29758562 PMID:29790872 PMID:29884136 PMID:29884841 PMID:29907814 PMID:29909963 PMID:29915322 PMID:29922827 PMID:29945567 PMID:29988080 PMID:30014164 PMID:30032850 PMID:30039884 PMID:30040829 PMID:30078507 PMID:30093976 PMID:30122538 PMID:30128899 PMID:30130155 PMID:30192042 PMID:30199306 PMID:30203341 PMID:30217213 PMID:30254663 PMID:30257646 PMID:30262796 PMID:30274973 PMID:30287823 PMID:30309222 PMID:30309722 PMID:30322717 PMID:30350268 PMID:30400234 PMID:30415210 PMID:30425037 PMID:30447919 PMID:30472649 PMID:30548481 PMID:30603682 PMID:30606148 PMID:30612635 PMID:30623411 PMID:30630528 PMID:30652428 PMID:30696104 PMID:30702160 PMID:30720243 PMID:30720863 PMID:30728895 PMID:30736435 PMID:30787465 PMID:30792206 PMID:30825404 PMID:30875412 PMID:30972954 PMID:30982232 PMID:31019283 PMID:31060523 PMID:31090900 PMID:31112341 PMID:31112363 PMID:31131967 PMID:31143373 PMID:31159747 PMID:31174498 PMID:31191615 PMID:31209999 PMID:31214711 PMID:31263054 PMID:31263571 PMID:31325073 PMID:31331294 PMID:31336956 PMID:31343793 PMID:31360904 PMID:31396961 PMID:31409081 PMID:31411802 PMID:31432501 PMID:31444830 PMID:31447099 PMID:31451522 PMID:31569370 PMID:31589614 PMID:31642931 PMID:31721781 PMID:31742824 PMID:31782247 PMID:31825140 PMID:31837001 PMID:31843900 PMID:31853058 PMID:31871109 PMID:31892343 PMID:31911673 PMID:31921681 PMID:31948886 PMID:31957001 PMID:31980526 PMID:32022259 PMID:32029870 PMID:32039725 PMID:32091409 PMID:32098980 PMID:32101877 PMID:32132887 PMID:32164353 PMID:32190957 PMID:32295079 PMID:32300229 PMID:32318955 PMID:32338768 PMID:32341426 PMID:32354836 PMID:32365798 PMID:32393398 PMID:32398771 PMID:32426482 PMID:32427313 PMID:32438681 PMID:32444794 PMID:32467295 PMID:32468491 PMID:32486089 PMID:32489267 PMID:32521533 PMID:32532514 PMID:32571290 PMID:32581362 PMID:32606146 PMID:32658311 PMID:32710294 PMID:32719484 PMID:32720237 PMID:32772980 PMID:32778078 PMID:32782288 PMID:32806537 PMID:32824581 PMID:32832836 PMID:32846166 PMID:32850417 PMID:32853339 PMID:32854451 PMID:32856869 PMID:32862574 PMID:32872764 PMID:32875559 PMID:32885271 PMID:32923906 PMID:32947577 PMID:32980694 PMID:33008098 PMID:33010199 PMID:33054725 PMID:33087929 PMID:33113089 PMID:33287145 PMID:33293522 PMID:33309985 PMID:33372952 PMID:33403015 PMID:33461583 PMID:33461977 PMID:33471991 PMID:33478551 PMID:33558524 PMID:33606809 PMID:33608381 PMID:33609447 PMID:33629534 PMID:33670479 PMID:33720054 PMID:33773534 PMID:33801055 PMID:33804961 PMID:33850850 PMID:33891299 PMID:33918338 PMID:33964450 PMID:33978741 PMID:34008015 PMID:34022715 PMID:34063308 PMID:34072659 PMID:34097676 PMID:34196900 PMID:34235180 PMID:34298626 PMID:34309133 PMID:34350294 PMID:34399810 PMID:34413315 PMID:34567246 PMID:34597585 PMID:34645131 PMID:34657357 PMID:34657373 PMID:34680878 PMID:34687993 PMID:34717758 PMID:34906479 PMID:34970085 PMID:35220195 PMID:35264596 PMID:35353237 PMID:35451682 PMID:35535697 PMID:35714671 PMID:35736817 PMID:35741847 PMID:35753294 PMID:35762214 PMID:35875314 PMID:35918668 PMID:35949895 PMID:36119527 PMID:36171877 PMID:36232564 PMID:36292577 PMID:36329109 PMID:36370215 PMID:36721989 PMID:36980738 PMID:36988593 PMID:36998040 PMID:37116400 PMID:37349538 PMID:37461096 PMID:38417439 PMID:38922859 More...
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NCBI chrNW_004936472:26,945,659...27,017,693
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G |
Brd7 |
bromodomain containing 7 |
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ISO |
protein:increased expression:brain: |
RGD |
PMID:24404152 |
RGD:9586441 |
NCBI chrNW_004936475:3,394,423...3,432,998
Ensembl chrNW_004936475:3,393,373...3,433,103
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G |
C3 |
complement C3 |
treatment |
ISO |
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RGD |
PMID:21678475 |
RGD:7401275 |
NCBI chrNW_004936588:3,985,732...4,023,221
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G |
Cacng2 |
calcium voltage-gated channel auxiliary subunit gamma 2 |
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ISO |
ClinVar Annotator: match by term: Ependymoma |
ClinVar |
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NCBI chrNW_004936492:4,125,182...4,232,239
Ensembl chrNW_004936492:4,125,173...4,236,062
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G |
Camk2a |
calcium/calmodulin dependent protein kinase II alpha |
disease_progression |
ISO |
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RGD |
PMID:29393370 |
RGD:13702478 |
NCBI chrNW_004936504:4,636,863...4,700,887
Ensembl chrNW_004936504:4,638,176...4,700,984
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G |
Camk2b |
calcium/calmodulin dependent protein kinase II beta |
disease_progression |
ISO |
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RGD |
PMID:15750623 |
RGD:13702479 |
NCBI chrNW_004936478:19,183,493...19,278,457
Ensembl chrNW_004936478:19,180,726...19,278,920
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Camkk2 |
calcium/calmodulin dependent protein kinase kinase 2 |
disease_progression |
ISO |
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RGD |
PMID:27012733 |
RGD:13674178 |
NCBI chrNW_004936558:3,030,343...3,060,191
Ensembl chrNW_004936558:3,030,289...3,061,227
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G |
Cat |
catalase |
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ISO |
CTD Direct Evidence: marker/mechanism |
CTD |
PMID:21138464 |
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NCBI chrNW_004936533:3,601,270...3,637,128
Ensembl chrNW_004936533:3,600,955...3,637,422
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G |
Cav1 |
caveolin 1 |
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ISO |
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RGD |
PMID:22528460 |
RGD:6784517 |
NCBI chrNW_004936589:2,504,235...2,536,778
Ensembl chrNW_004936589:2,504,224...2,537,170
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G |
Cav2 |
caveolin 2 |
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ISO |
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RGD |
PMID:22528460 |
RGD:6784517 |
NCBI chrNW_004936589:2,553,932...2,561,186
Ensembl chrNW_004936589:2,552,477...2,561,569
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G |
Ccn1 |
cellular communication network factor 1 |
exacerbates |
ISO |
human cells in mouse model |
RGD |
PMID:15026334 |
RGD:329845555 |
NCBI chrNW_004936608:152,174...155,123
Ensembl chrNW_004936608:151,838...155,358
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G |
Ccnd1 |
cyclin D1 |
disease_progression susceptibility |
ISO |
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RGD |
PMID:21844184 PMID:22304571 |
RGD:13681930 RGD:13702091 |
Ensembl chrNW_004936599:973,838...983,316
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G |
Ccr4 |
C-C motif chemokine receptor 4 |
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ISO |
CTD Direct Evidence: marker/mechanism |
CTD |
PMID:17522861 |
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NCBI chrNW_004936473:23,321,167...23,323,075
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G |
Cd40 |
CD40 molecule |
treatment |
ISO |
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RGD |
PMID:24878890 |
RGD:11352275 |
NCBI chrNW_004936514:6,936,915...6,947,246
Ensembl chrNW_004936514:6,936,572...6,947,280
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G |
Cd80 |
CD80 molecule |
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ISO |
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RGD |
PMID:10078962 |
RGD:727266 |
NCBI chrNW_004936536:6,462,080...6,483,450
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G |
Cdk4 |
cyclin dependent kinase 4 |
disease_progression |
ISO |
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RGD |
PMID:21844184 PMID:23761023 |
RGD:13702090 RGD:13702091 |
NCBI chrNW_004936646:1,886,262...1,889,260
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G |
Cdk6 |
cyclin dependent kinase 6 |
severity |
ISO |
DNA:amplification: |
RGD |
PMID:9102208 PMID:22736304 |
RGD:13702093 RGD:13702094 |
NCBI chrNW_004936803:1,025,047...1,229,396
Ensembl chrNW_004936803:1,024,779...1,227,516
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G |
Cdkn1a |
cyclin dependent kinase inhibitor 1A |
severity treatment |
ISO |
DNA:hypermethylation:promoter: |
RGD |
PMID:9144534 PMID:18791688 PMID:20844987 |
RGD:13702125 RGD:13702128 RGD:13702129 |
NCBI chrNW_004936476:22,717,308...22,725,127
Ensembl chrNW_004936476:22,717,260...22,725,182
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G |
Cdkn2b |
cyclin dependent kinase inhibitor 2B |
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ISO |
CTD Direct Evidence: marker/mechanism |
CTD |
PMID:19578366 PMID:19578367 |
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NCBI chrNW_004936652:3,576,975...3,582,790
Ensembl chrNW_004936652:3,538,986...3,581,159
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G |
Chaf1a |
chromatin assembly factor 1 subunit A |
susceptibility |
ISO |
DNA:SNP:intron:rs243356(human) |
RGD |
PMID:18048407 |
RGD:9587459 |
NCBI chrNW_004936588:2,536,141...2,564,897
Ensembl chrNW_004936588:2,542,265...2,564,962
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G |
Chaf1b |
chromatin assembly factor 1 subunit B |
disease_progression |
ISO |
protein:increased expression:brain: |
RGD |
PMID:24039914 |
RGD:9587472 |
NCBI chrNW_004936500:6,262,207...6,288,833
Ensembl chrNW_004936500:6,262,229...6,288,839
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G |
Chek2 |
checkpoint kinase 2 |
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ISO |
ClinVar Annotator: match by term: Astrocytoma |
ClinVar |
PMID:10617473 PMID:11053450 PMID:11479205 PMID:11719428 PMID:11967536 PMID:12094328 PMID:12533788 PMID:12690581 PMID:14648717 PMID:14648718 PMID:14648719 PMID:15087378 PMID:15095295 PMID:15122511 PMID:15466005 PMID:15488637 PMID:15492928 PMID:15520402 PMID:16257342 PMID:16492927 PMID:16880452 PMID:17085682 PMID:18172190 PMID:18381420 PMID:18759107 PMID:19338683 PMID:19768534 PMID:19805189 PMID:21779515 PMID:21807500 PMID:21876083 PMID:21956126 PMID:22006311 PMID:22058428 PMID:22419737 PMID:22811390 PMID:22994785 PMID:23109706 PMID:23469205 PMID:23652375 PMID:23946381 PMID:24033266 PMID:24713400 PMID:24884479 PMID:25431674 PMID:25583358 PMID:25741868 PMID:26467025 PMID:26845104 PMID:26884562 PMID:26976419 PMID:27223485 PMID:27269948 PMID:27433846 PMID:27711073 PMID:27751358 PMID:27798748 PMID:28135145 PMID:28195393 PMID:28492532 PMID:28503720 PMID:28514723 PMID:28727877 PMID:28734145 PMID:28779002 PMID:28802053 PMID:28874143 PMID:29351919 PMID:29489754 PMID:29522266 PMID:29909568 PMID:31300551 PMID:31993860 PMID:32119081 PMID:32285038 PMID:32295079 PMID:32383162 PMID:32531112 PMID:36222830 PMID:37055167 PMID:37149759 More...
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NCBI chrNW_004936657:2,805,947...2,848,180
Ensembl chrNW_004936657:2,805,959...2,848,180
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G |
Chi3l1 |
chitinase 3 like 1 |
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ISO |
CTD Direct Evidence: marker/mechanism |
CTD |
PMID:20506295 |
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NCBI chrNW_004936567:1,411,080...1,418,332
Ensembl chrNW_004936567:1,411,037...1,418,801
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G |
Clcn2 |
chloride voltage-gated channel 2 |
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ISO |
CTD Direct Evidence: marker/mechanism |
CTD |
PMID:12843258 |
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NCBI chrNW_004936578:5,525,461...5,539,351
Ensembl chrNW_004936578:5,525,601...5,539,472
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G |
Clcn3 |
chloride voltage-gated channel 3 |
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ISO |
CTD Direct Evidence: marker/mechanism |
CTD |
PMID:12843258 |
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NCBI chrNW_004936516:1,678,610...1,760,099
Ensembl chrNW_004936516:1,678,653...1,760,294
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G |
Clcn5 |
chloride voltage-gated channel 5 |
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ISO |
CTD Direct Evidence: marker/mechanism |
CTD |
PMID:12843258 |
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NCBI chrNW_004936721:1,552,312...1,602,360
Ensembl chrNW_004936721:1,445,779...1,596,814
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G |
Cntn2 |
contactin 2 |
severity |
ISO |
mRNA, protein:increased expression:brain (human) |
RGD |
PMID:11280781 |
RGD:734799 |
NCBI chrNW_004936557:7,297,429...7,320,666
Ensembl chrNW_004936557:7,297,422...7,320,846
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Cplane1 |
ciliogenesis and planar polarity effector complex subunit 1 |
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ISO |
ClinVar Annotator: match by term: Astrocytoma |
ClinVar |
PMID:25741868 PMID:28492532 |
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NCBI chrNW_004936518:4,706,496...4,847,283
Ensembl chrNW_004936518:4,706,500...4,847,316
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G |
Csf1 |
colony stimulating factor 1 |
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ISO |
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RGD |
PMID:15728459 |
RGD:2293641 |
NCBI chrNW_004936704:1,372,137...1,393,355
Ensembl chrNW_004936704:1,378,103...1,393,542
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G |
CUNH11orf65 |
chromosome unknown C11orf65 homolog |
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ISO |
ClinVar Annotator: match by term: Malignant glioma |
ClinVar |
PMID:8659541 PMID:8808599 PMID:9000145 PMID:9463314 PMID:10330348 PMID:10817650 PMID:10980530 PMID:11298136 PMID:12552559 PMID:21445571 PMID:21459046 PMID:21792198 PMID:25741868 PMID:26681312 PMID:28492532 PMID:29478780 PMID:30549301 PMID:33471991 More...
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NCBI chrNW_004936551:305,617...343,369
Ensembl chrNW_004936551:305,611...351,063
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G |
Cxcr3 |
C-X-C motif chemokine receptor 3 |
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ISO |
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RGD |
PMID:16434036 |
RGD:5135509 |
NCBI chrNW_004936762:66,636...69,694
Ensembl chrNW_004936762:66,636...69,373
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G |
Dcn |
decorin |
disease_progression |
ISO |
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RGD |
PMID:15475879 |
RGD:2311425 |
NCBI chrNW_004936507:7,887,259...7,923,055
Ensembl chrNW_004936507:7,884,654...7,922,961
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G |
Dcx |
doublecortin |
disease_progression treatment |
ISO |
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RGD |
PMID:17178868 PMID:19681167 PMID:21477071 |
RGD:12904748 RGD:12904754 RGD:12904761 |
NCBI chrNW_004936499:3,905,262...4,004,457
Ensembl chrNW_004936499:3,903,376...4,005,508
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G |
Ddr1 |
discoidin domain receptor tyrosine kinase 1 |
severity |
ISO |
mRNA, protein:increased expression:brain (human) |
RGD |
PMID:16652150 |
RGD:151347531 |
NCBI chrNW_004936837:523,227...538,799
Ensembl chrNW_004936837:523,266...538,833
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G |
Depdc5 |
DEP domain containing 5, GATOR1 subcomplex subunit |
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ISO |
ClinVar Annotator: match by term: Ependymoma |
ClinVar |
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NCBI chrNW_004936755:871,935...1,024,538
Ensembl chrNW_004936755:872,815...1,024,057
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G |
Dicer1 |
dicer 1, ribonuclease III |
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ISO |
ClinVar Annotator: match by term: Pediatric high-grade glioma |
ClinVar |
PMID:25741868 PMID:26526666 PMID:28492532 PMID:29708584 |
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NCBI chrNW_004936846:528,768...584,599
Ensembl chrNW_004936846:532,972...575,689
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G |
Dlk1 |
delta like non-canonical Notch ligand 1 |
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ISO |
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RGD |
PMID:16288219 |
RGD:1625600 |
NCBI chrNW_004936604:4,504,519...4,511,897
Ensembl chrNW_004936604:4,504,503...4,511,910
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G |
Dll4 |
delta like canonical Notch ligand 4 |
ameliorates |
ISO |
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RGD |
PMID:17183313 |
RGD:155791441 |
NCBI chrNW_004936471:4,320,235...4,330,251
Ensembl chrNW_004936471:4,320,933...4,330,253
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G |
Dmxl1 |
Dmx like 1 |
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ISO |
CTD Direct Evidence: marker/mechanism |
CTD |
PMID:16865689 |
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NCBI chrNW_004936715:2,013,745...2,177,418
Ensembl chrNW_004936715:2,013,722...2,179,224
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G |
E2f1 |
E2F transcription factor 1 |
severity |
ISO |
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RGD |
PMID:28042322 |
RGD:13702468 |
NCBI chrNW_004936561:6,894,827...6,901,058
Ensembl chrNW_004936561:6,896,063...6,900,026
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G |
E2f3 |
E2F transcription factor 3 |
disease_progression |
ISO |
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RGD |
PMID:28337965 |
RGD:13702470 |
NCBI chrNW_004936552:5,712,247...5,783,643
Ensembl chrNW_004936552:5,711,923...5,783,694
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G |
Efemp1 |
EGF containing fibulin extracellular matrix protein 1 |
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ISO |
protein:increased expression:brain: |
RGD |
PMID:19887559 |
RGD:10401656 |
NCBI chrNW_004936491:2,159,654...2,214,480
Ensembl chrNW_004936491:2,159,096...2,214,677
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G |
Efl1 |
elongation factor like GTPase 1 |
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ISO |
CTD Direct Evidence: marker/mechanism |
CTD |
PMID:25015090 |
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NCBI chrNW_004936483:18,550,832...18,685,762
Ensembl chrNW_004936483:18,550,844...18,685,627
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G |
Egf |
epidermal growth factor |
susceptibility |
ISO |
DNA:polymorphism:promoter:GG genotypes were associated with increased risk. DNA:polymorphism:promoter:+61A>G(human) |
RGD |
PMID:17473192 PMID:22106858 |
RGD:13702473 RGD:13702474 |
NCBI chrNW_004936563:1,058,803...1,181,393
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Egfr |
epidermal growth factor receptor |
treatment |
ISO |
protein:alternative form:tumor (human) |
RGD |
PMID:7606735 PMID:10616092 |
RGD:38599219 RGD:5131512 |
NCBI chrNW_004936678:365,005...560,546
Ensembl chrNW_004936678:365,834...436,528
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Ehd1 |
EH domain containing 1 |
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ISO |
CTD Direct Evidence: marker/mechanism |
CTD |
PMID:35616188 |
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NCBI chrNW_004936599:4,451,207...4,473,078
Ensembl chrNW_004936599:4,450,188...4,473,738
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G |
Entpd2 |
ectonucleoside triphosphate diphosphohydrolase 2 |
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ISO |
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RGD |
PMID:19558578 |
RGD:9685528 |
NCBI chrNW_004936669:901,192...906,765
Ensembl chrNW_004936669:901,104...906,782
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G |
Epha5 |
EPH receptor A5 |
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ISO |
ClinVar Annotator: match by term: Astrocytoma |
ClinVar |
PMID:25741868 |
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NCBI chrNW_004936582:2,503,546...2,832,950
Ensembl chrNW_004936582:2,505,145...2,830,014
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Epo |
erythropoietin |
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ISO |
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RGD |
PMID:21749867 |
RGD:10400910 |
NCBI chrNW_004936543:742,722...745,332
Ensembl chrNW_004936543:743,537...745,343
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G |
Epor |
erythropoietin receptor |
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ISO |
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RGD |
PMID:21749867 |
RGD:10400910 |
NCBI chrNW_004936659:1,468,391...1,473,880
Ensembl chrNW_004936659:1,468,634...1,473,880
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G |
Erbb2 |
erb-b2 receptor tyrosine kinase 2 |
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ISO |
ClinVar Annotator: match by term: Glioma susceptibility 1 |
OMIM ClinVar |
PMID:15457249 |
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NCBI chrNW_004936490:14,887,062...14,910,038
Ensembl chrNW_004936490:14,887,043...14,909,956
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G |
Ercc1 |
ERCC excision repair 1, endonuclease non-catalytic subunit |
susceptibility |
ISO |
DNA:snp:3'utr:c.8092C>A (human) (rs3212986) |
RGD |
PMID:25867436 |
RGD:13207318 |
NCBI chrNW_004936706:1,854,938...1,867,521
Ensembl chrNW_004936706:1,852,359...1,867,745
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G |
Ercc2 |
ERCC excision repair 2, TFIIH core complex helicase subunit |
susceptibility |
ISO |
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RGD |
PMID:11319176 |
RGD:10401082 |
NCBI chrNW_004936706:1,816,561...1,829,638
Ensembl chrNW_004936706:1,816,571...1,829,692
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G |
Ercc5 |
ERCC excision repair 5, endonuclease |
susceptibility |
ISO |
DNA:SNP:cd: p.D1558H (rs17655) (human) |
RGD |
PMID:23534771 |
RGD:401850601 |
NCBI chrNW_004936472:8,209,482...8,234,696
Ensembl chrNW_004936472:8,209,540...8,234,334
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G |
F2 |
coagulation factor II, thrombin |
treatment |
ISO |
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RGD |
PMID:15975137 |
RGD:1578509 |
NCBI chrNW_004936562:2,371,725...2,388,617
Ensembl chrNW_004936562:2,372,044...2,388,650
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G |
Fam107a |
family with sequence similarity 107 member A |
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ISO |
CTD Direct Evidence: marker/mechanism |
CTD |
PMID:16865689 |
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NCBI chrNW_004936473:2,438,995...2,483,746
Ensembl chrNW_004936473:2,438,626...2,484,071
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G |
Fanca |
FA complementation group A |
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ISO |
ClinVar Annotator: match by term: Pediatric high-grade glioma |
ClinVar |
PMID:25741868 |
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NCBI chrNW_004936641:281,119...319,796
Ensembl chrNW_004936641:281,073...324,053
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G |
Fancb |
FA complementation group B |
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ISO |
ClinVar Annotator: match by term: Glioma susceptibility 1 |
ClinVar |
PMID:15502827 PMID:16199547 PMID:23613520 PMID:25741868 PMID:28492532 |
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NCBI chrNW_004936470:4,305,220...4,323,456
Ensembl chrNW_004936470:4,305,740...4,323,374
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G |
Fas |
Fas cell surface death receptor |
severity |
ISO |
mouse gene in a rat model |
RGD |
PMID:11440439 |
RGD:8663460 |
NCBI chrNW_004936735:209,369...234,582
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G |
Fbxw7 |
F-box and WD repeat domain containing 7 |
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ISO |
CTD Direct Evidence: marker/mechanism |
CTD |
PMID:18931460 |
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NCBI chrNW_004936689:2,261,163...2,449,951
Ensembl chrNW_004936689:2,259,477...2,344,764
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G |
Fgfr1 |
fibroblast growth factor receptor 1 |
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ISO |
ClinVar Annotator: match by term: Astrocytoma |
ClinVar |
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NCBI chrNW_004936710:1,760,365...1,815,269
Ensembl chrNW_004936710:1,760,089...1,815,508
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G |
Flt3lg |
fms related receptor tyrosine kinase 3 ligand |
treatment |
ISO |
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RGD |
PMID:15564139 |
RGD:11049500 |
NCBI chrNW_004936664:3,343,541...3,351,590
Ensembl chrNW_004936664:3,343,491...3,350,176
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G |
Fth1 |
ferritin heavy chain 1 |
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ISO |
CTD Direct Evidence: marker/mechanism |
CTD |
PMID:21385903 |
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NCBI chrNW_004936581:1,118,905...1,120,592
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G |
Gdnf |
glial cell derived neurotrophic factor |
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ISO |
CTD Direct Evidence: marker/mechanism |
CTD |
PMID:19138852 |
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NCBI chrNW_004936518:4,291,391...4,310,752
Ensembl chrNW_004936518:4,288,154...4,310,753
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G |
Gja1 |
gap junction protein alpha 1 |
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ISO |
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RGD |
PMID:22808518 |
RGD:7207264 |
NCBI chrNW_004936658:3,920,043...3,932,987
Ensembl chrNW_004936658:3,920,043...3,932,987
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G |
Glb1 |
galactosidase beta 1 |
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ISO |
ClinVar Annotator: match by term: Ependymoma |
ClinVar |
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NCBI chrNW_004936473:23,348,431...23,440,271
Ensembl chrNW_004936473:23,348,416...23,440,196
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G |
Gon4l |
gon-4 like |
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ISO |
ClinVar Annotator: match by term: Ependymoma |
ClinVar |
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NCBI chrNW_004936580:5,044,536...5,124,575
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G |
Gstm3 |
glutathione S-transferase mu 3 |
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ISO |
DNA: deletion: intron 6 |
RGD |
PMID:16598069 |
RGD:5688743 |
NCBI chrNW_004936704:1,233,909...1,236,864
Ensembl chrNW_004936704:1,233,780...1,237,329
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G |
Gstp1 |
glutathione S-transferase pi 1 |
susceptibility |
ISO |
DNA:polymorphism:exon:p.I105V (rs1695) (human) CTD Direct Evidence: marker/mechanism |
RGD CTD |
PMID:15006924 PMID:16899598 |
RGD:5490124 |
NCBI chrNW_004936599:2,197,681...2,200,642
Ensembl chrNW_004936599:2,197,634...2,201,050
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G |
Hdac3 |
histone deacetylase 3 |
disease_progression |
ISO |
mRNA,protein:increased expression:brain: ClinVar Annotator: match by term: Ependymoma |
RGD ClinVar |
PMID:23685192 |
RGD:9590201 |
NCBI chrNW_004936504:12,530,546...12,546,556
Ensembl chrNW_004936504:12,530,528...12,546,556
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G |
Hells |
helicase, lymphoid specific |
severity |
ISO |
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RGD |
PMID:28042322 |
RGD:13702468 |
NCBI chrNW_004936601:626,354...662,477
Ensembl chrNW_004936601:626,823...662,465
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G |
Hgf |
hepatocyte growth factor |
disease_progression |
ISO |
protein:increased expression:brain: |
RGD |
PMID:12115353 |
RGD:8548633 |
NCBI chrNW_004936734:354,798...428,356
Ensembl chrNW_004936734:356,115...428,779
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G |
Hmgb1 |
high mobility group box 1 |
treatment |
ISO |
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RGD |
PMID:10830965 |
RGD:10402059 |
NCBI chrNW_004936472:25,236,728...25,246,585
Ensembl chrNW_004936472:25,236,728...25,246,580
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G |
Hmgn5 |
high mobility group nucleosome binding domain 5 |
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ISO |
CTD Direct Evidence: marker/mechanism |
CTD |
PMID:22109888 |
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NCBI chrNW_004936547:2,607,491...2,614,037
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G |
Hras |
HRas proto-oncogene, GTPase |
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ISO |
CTD Direct Evidence: marker/mechanism |
MouseDO CTD |
PMID:30619488 |
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NCBI chrNW_004936888:375,372...378,125
Ensembl chrNW_004936888:375,377...377,958
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G |
Hspa5 |
heat shock protein family A (Hsp70) member 5 |
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ISO |
protein:increased expression |
RGD |
PMID:21112319 |
RGD:5685704 |
NCBI chrNW_004936487:13,348,465...13,352,717
Ensembl chrNW_004936487:13,348,465...13,352,717
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G |
Idh1 |
isocitrate dehydrogenase (NADP(+)) 1 |
susceptibility |
ISO |
ClinVar Annotator: match by term: Glioma susceptibility 1 | ClinVar Annotator: match by term: IDH1-related condition ClinVar Annotator: match by term: Brainstem glioma | ClinVar Annotator: match by term: Glioma susceptibility 1 | ClinVar Annotator: match by term: Glioma susceptibility 9 | ClinVar Annotator: match by term: IDH1-related condition ClinVar Annotator: match by term: Brainstem glioma | ClinVar Annotator: match by term: Ependymoma | ClinVar Annotator: match by term: Glioma susceptibility 1 | ClinVar Annotator: match by term: Glioma susceptibility 9 |
OMIM ClinVar |
PMID:18772396 PMID:19657110 PMID:19798509 PMID:19818334 PMID:20946881 PMID:21352804 PMID:21446021 PMID:22160010 PMID:22397365 PMID:22417203 PMID:22898539 PMID:23558169 PMID:24606448 PMID:24728327 PMID:25043048 PMID:25157968 PMID:25741868 PMID:26619011 PMID:27993330 PMID:28492532 PMID:30231226 PMID:36201590 More...
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NCBI chrNW_004936950:334,894...349,221
Ensembl chrNW_004936950:334,934...348,363
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G |
Ifng |
interferon gamma |
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ISO |
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RGD |
PMID:10078962 |
RGD:727266 |
NCBI chrNW_004936545:6,139,130...6,144,543
Ensembl chrNW_004936545:6,139,116...6,148,452
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G |
Igf1 |
insulin like growth factor 1 |
severity |
ISO |
protein:increased expression:serum: |
RGD |
PMID:21788435 |
RGD:8548833 |
NCBI chrNW_004936492:11,709,623...11,784,028
Ensembl chrNW_004936492:11,709,222...11,778,351
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G |
Igf1r |
insulin like growth factor 1 receptor |
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ISO |
DNA: SNP: : rs2272037 or rs2016347 |
RGD |
PMID:18562769 |
RGD:5686434 |
NCBI chrNW_004936483:4,563,995...4,860,231
Ensembl chrNW_004936483:4,564,512...4,852,925
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G |
Igfbp3 |
insulin like growth factor binding protein 3 |
severity |
ISO |
protein:increased expression:serum: |
RGD |
PMID:21788435 |
RGD:8548833 |
NCBI chrNW_004936478:20,511,490...20,518,251
Ensembl chrNW_004936478:20,510,137...20,518,306
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G |
Il10 |
interleukin 10 |
susceptibility |
ISO |
DNA:SNP: :rs1800896 (human) |
RGD |
PMID:20406895 |
RGD:4140470 |
NCBI chrNW_004936557:5,834,874...5,838,502
Ensembl chrNW_004936557:5,834,874...5,838,502
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G |
Il12a |
interleukin 12A |
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ISO |
CTD Direct Evidence: therapeutic |
CTD |
PMID:18176109 |
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NCBI chrNW_004936519:6,166,060...6,180,652
Ensembl chrNW_004936519:6,175,261...6,180,396
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G |
Il12b |
interleukin 12B |
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ISO |
CTD Direct Evidence: therapeutic |
CTD |
PMID:18176109 |
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NCBI chrNW_004936515:4,056,214...4,066,121
Ensembl chrNW_004936515:4,056,214...4,065,076
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G |
Il18 |
interleukin 18 |
treatment |
ISO |
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RGD |
PMID:18725309 |
RGD:8657054 |
NCBI chrNW_004936612:2,306,963...2,325,086
Ensembl chrNW_004936612:2,306,875...2,325,189
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G |
Il2 |
interleukin 2 |
treatment |
ISO |
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RGD |
PMID:12864971 |
RGD:8663439 |
NCBI chrNW_004936662:1,594,953...1,599,625
Ensembl chrNW_004936662:1,594,953...1,599,625
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G |
Il7 |
interleukin 7 |
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ISO |
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RGD |
PMID:10078962 |
RGD:727266 |
NCBI chrNW_004936702:110,625...162,957
Ensembl chrNW_004936702:111,211...162,322
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G |
Isg15 |
ISG15 ubiquitin like modifier |
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ISO |
CTD Direct Evidence: marker/mechanism |
CTD |
PMID:35506701 |
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NCBI chrNW_004936737:2,043,383...2,044,761
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G |
Kat6b |
lysine acetyltransferase 6B |
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ISO |
ClinVar Annotator: match by term: Ependymoma |
ClinVar |
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NCBI chrNW_004936521:4,309,699...4,497,755
Ensembl chrNW_004936521:4,309,694...4,496,904
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G |
Kdm5b |
lysine demethylase 5B |
disease_progression |
ISO |
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RGD |
PMID:25450384 |
RGD:13702126 |
NCBI chrNW_004936567:1,782,056...1,860,861
Ensembl chrNW_004936567:1,781,995...1,863,461
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G |
Kdr |
kinase insert domain receptor |
severity disease_progression |
ISO |
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RGD |
PMID:10506722 PMID:20501615 |
RGD:5684393 RGD:5684425 |
NCBI chrNW_004936482:17,537,697...17,581,320
Ensembl chrNW_004936482:17,538,864...17,581,002
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G |
Klhl21 |
kelch like family member 21 |
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ISO |
ClinVar Annotator: match by term: Ependymoma |
ClinVar |
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NCBI chrNW_004936623:1,344,603...1,355,594
Ensembl chrNW_004936623:1,344,622...1,355,739
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G |
Kmt2d |
lysine methyltransferase 2D |
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ISO |
ClinVar Annotator: match by term: Astrocytoma |
ClinVar |
PMID:25741868 |
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NCBI chrNW_004936512:6,819,240...6,860,852
Ensembl chrNW_004936512:6,822,057...6,854,451
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G |
Kras |
KRAS proto-oncogene, GTPase |
severity |
ISO |
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RGD |
PMID:19435821 PMID:22207524 |
RGD:13702477 RGD:13702860 |
NCBI chrNW_004936548:2,078,568...2,113,877
Ensembl chrNW_004936548:2,079,036...2,110,523
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G |
Kremen2 |
kringle containing transmembrane protein 2 |
|
ISO |
ClinVar Annotator: match by term: Ependymoma |
ClinVar |
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NCBI chrNW_004936694:1,201,008...1,205,593
Ensembl chrNW_004936694:1,201,812...1,205,246
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G |
Lats1 |
large tumor suppressor kinase 1 |
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ISO |
ClinVar Annotator: match by term: Ependymoma |
ClinVar |
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NCBI chrNW_004936489:2,607,114...2,649,879
Ensembl chrNW_004936489:2,605,195...2,649,879
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G |
Letm1 |
leucine zipper and EF-hand containing transmembrane protein 1 |
|
ISO |
ClinVar Annotator: match by term: Ependymoma |
ClinVar |
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NCBI chrNW_004936477:21,550,104...21,589,662
Ensembl chrNW_004936477:21,550,013...21,587,007
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G |
Lgals3 |
galectin 3 |
disease_progression |
ISO |
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RGD |
PMID:23179497 |
RGD:9685225 |
NCBI chrNW_004936697:20,861...38,568
Ensembl chrNW_004936697:27,145...38,586
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G |
Lig4 |
DNA ligase 4 |
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ISO |
DNA:SNP: :rs1805388 (human) |
RGD |
PMID:23663450 |
RGD:13204718 |
NCBI chrNW_004936472:3,861,833...3,867,943
Ensembl chrNW_004936472:3,861,866...3,867,933
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G |
LOC101963041 |
histone H3.3A |
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ISO |
CTD Direct Evidence: marker/mechanism |
CTD |
PMID:22286216 PMID:23583981 |
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NCBI chrNW_004936526:2,835,002...2,842,328
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G |
LOC101973029 |
cytochrome P450 2E1 |
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ISO |
DNA:snp:promoter:c.-1053C>T (human) |
RGD |
PMID:12540498 |
RGD:1358568 |
NCBI chrNW_004936486:19,691,822...19,702,684
Ensembl chrNW_004936486:19,691,822...19,702,102
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G |
Lta |
lymphotoxin alpha |
treatment |
ISO |
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RGD |
PMID:1883913 |
RGD:1625042 |
NCBI chrNW_004936727:1,940,081...1,941,022
Ensembl chrNW_004936727:1,940,081...1,941,022
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G |
Lztr1 |
leucine zipper like post translational regulator 1 |
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ISO |
ClinVar Annotator: match by term: Pediatric high-grade glioma |
ClinVar |
PMID:25741868 |
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NCBI chrNW_004936619:2,505,300...2,523,500
Ensembl chrNW_004936619:2,505,542...2,523,500
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G |
Map2k1 |
mitogen-activated protein kinase kinase 1 |
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ISO |
|
RGD |
PMID:21057530 |
RGD:13702863 |
NCBI chrNW_004936471:26,589,251...26,628,302
Ensembl chrNW_004936471:26,589,161...26,628,302
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G |
Map4k3 |
mitogen-activated protein kinase kinase kinase kinase 3 |
|
ISO |
ClinVar Annotator: match by term: Ependymoma |
ClinVar |
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NCBI chrNW_004936508:11,885,066...12,062,560
Ensembl chrNW_004936508:11,884,684...12,064,066
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G |
Mapk3 |
mitogen-activated protein kinase 3 |
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ISO |
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RGD |
PMID:27256374 |
RGD:13702865 |
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