RGD DISEASE ONTOLOGY - ANNOTATIONS
RGD uses the Human Disease Ontology (DO, https://disease-ontology.org/) for disease curation across species. RGD automatically downloads each new release of the ontology on a monthly basis. Some additional terms which are required for RGD's curation purposes but are not currently covered in the official version of DO have been added. As corresponding terms are added to DO, these custom terms are retired and the DO terms substituted in existing annotations and subsequently used for curation.
Term: paracoccidioidomycosis
Accession: DOID:12662
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Definition: A primary systemic mycosis that results_in systemic fungal infection located_in mucosa, located_in lymph nodes, located_in bone, located_in skin or located_in lungs, has_material_basis_in Paracoccidioides brasiliensis. (DO)
Synonyms: exact_synonym: South American blastomycosis; mucocutaneous-lymphangitic paracoccidioidomycosis; paracoccidioidal mycosis; paracoccidioidomycoses
primary_id: MESH:D010229
xref: EFO:0007417 ; GARD:7323 ; ICD10CM:B41 ; ICD9CM:116.1 ; NCI:C34891
For additional species annotation, visit the
Alliance of Genome Resources .
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CCR5
C-C motif chemokine receptor 5
ISO
RGD
PMID:18292527
RGD:4892087
NCBI chr 3:46,370,142...46,376,206
Ensembl chr 3:46,370,946...46,376,206
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CD28
CD28 molecule
ISO
RGD
PMID:20713624
RGD:5131616
NCBI chr 2:203,706,482...203,738,912
Ensembl chr 2:203,706,517...203,739,756
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CFB
complement factor B
IEP
RGD
PMID:7921333
RGD:7421526
NCBI chr 6:31,946,095...31,952,084
Ensembl chr 6:31,945,650...31,952,086
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HLA-DRB1
major histocompatibility complex, class II, DR beta 1
severity
IAGP
DNA:polymorphism, haplotype:cds:HLA-DRB1*11 (human)
RGD
PMID:17325942
RGD:5147631
NCBI chr 6:32,578,775...32,589,848
Ensembl chr 6:32,577,902...32,589,848
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ICAM1
intercellular adhesion molecule 1
ISO
RGD
PMID:17003484
RGD:8547589
NCBI chr19:10,271,120...10,286,615
Ensembl chr19:10,271,093...10,286,615
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IDO1
indoleamine 2,3-dioxygenase 1
ISO
mRNA, protein:decreased expression, decreased activity:lung,plasmacytoid dendritic cell (mouse)
RGD
PMID:27992577
RGD:39939072
NCBI chr 8:39,913,891...39,928,790
Ensembl chr 8:39,902,275...39,928,790
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IL18
interleukin 18
treatment
IEP
RGD
PMID:28992214
RGD:39938858
NCBI chr11:112,143,260...112,164,094
Ensembl chr11:112,143,251...112,164,096
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IL1B
interleukin 1 beta
treatment
IEP
RGD
PMID:28992214
RGD:39938858
NCBI chr 2:112,829,751...112,836,779
Ensembl chr 2:112,829,751...112,836,816
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IL1RL1
interleukin 1 receptor like 1
treatment
IEP
RGD
PMID:28992214
RGD:39938858
NCBI chr 2:102,311,563...102,352,356
Ensembl chr 2:102,311,502...102,352,037
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IL32
interleukin 32
IEP
protein:increased expression:mouth mucosa, mononuclear cell (human)
RGD
PMID:33771629
RGD:150340738
NCBI chr16:3,065,403...3,069,530
Ensembl chr16:3,065,297...3,082,192
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IL33
interleukin 33
treatment
IEP
RGD
PMID:28992214
RGD:39938858
NCBI chr 9:6,215,149...6,257,983
Ensembl chr 9:6,215,786...6,257,983
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IL37
interleukin 37
treatment
IEP
RGD
PMID:28992214
RGD:39938858
NCBI chr 2:112,911,165...112,918,882
Ensembl chr 2:112,911,165...112,918,882
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MMP2
matrix metallopeptidase 2
ISO
RGD
PMID:19765107
RGD:8657058
NCBI chr16:55,478,830...55,506,691
Ensembl chr16:55,389,700...55,506,691
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MMP9
matrix metallopeptidase 9
ISO
RGD
PMID:19765107
RGD:8657058
NCBI chr20:46,008,908...46,016,561
Ensembl chr20:46,008,908...46,016,561
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TNF
tumor necrosis factor
susceptibility
IAGP
DNA:SNP:promoter:−308G>A(human)
RGD
PMID:17145373
RGD:7401182
NCBI chr 6:31,575,565...31,578,336
Ensembl chr 6:31,575,565...31,578,336
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