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RGD DISEASE ONTOLOGY - ANNOTATIONS

RGD uses the Human Disease Ontology (DO, https://disease-ontology.org/) for disease curation across species. RGD automatically downloads each new release of the ontology on a monthly basis. Some additional terms which are required for RGD's curation purposes but are not currently covered in the official version of DO have been added. As corresponding terms are added to DO, these custom terms are retired and the DO terms substituted in existing annotations and subsequently used for curation.

Term:functional gastric disease
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Accession:DOID:1159 term browser browse the term
Synonyms:primary_id: RDO:9003446
 xref: ICD9CM:536.8
For additional species annotation, visit the Alliance of Genome Resources.



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Diabetic Gastroparesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NOS3 nitric oxide synthase 3 ISO mRNA:decreased expression:pyloric antrum (rat) RGD PMID:29071981 RGD:13446417 NCBI chr16:15,054,196...15,072,454
Ensembl chr16:15,011,344...15,072,277
JBrowse link
Dyspepsia term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CRH corticotropin releasing hormone ISO protein:increased expression:central nucleus of amygdala, paraventricular hypothalamic nucleus (rat) RGD PMID:21589865 RGD:5490556 NCBI chr29:15,831,944...15,840,560
Ensembl chr29:15,831,944...15,834,384
JBrowse link
G HTR3A 5-hydroxytryptamine receptor 3A ISO DNA:SNP:promoter:c.-42C>T(human) RGD PMID:22014438 RGD:6480658 NCBI chr 5:19,324,087...19,338,250
Ensembl chr 5:19,324,444...19,338,294
JBrowse link
G IFNG interferon gamma treatment ISO RGD PMID:28854971 RGD:14975120 NCBI chr10:10,406,866...10,411,698
Ensembl chr10:10,406,867...10,411,698
JBrowse link
G IL10 interleukin 10 no_association ISO DNA:SNP:promoter:-819C>A (rs1800871)(human)
DNA:SNP:promoter:-1082G>A (rs1800896)(human)
RGD PMID:28965252 RGD:14975154 NCBI chr 7:5,933,285...5,937,057
Ensembl chr 7:5,933,285...5,937,057
JBrowse link
G SLC6A4 solute carrier family 6 member 4 susceptibility ISO DNA:polymorphism: :
DNA:haplotypes, multiple:
RGD PMID:22014438 PMID:24720453 RGD:36947385 RGD:6480658 NCBI chr 9:44,224,026...44,259,655
Ensembl chr 9:44,224,229...44,259,736
JBrowse link
gastroparesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HMOX1 heme oxygenase 1 ISO CTD Direct Evidence: therapeutic CTD PMID:20378827 NCBI chr10:28,744,404...28,751,544
Ensembl chr10:28,743,795...28,751,773
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  disease 15758
    disease of anatomical entity 15377
      gastrointestinal system disease 6635
        stomach disease 1033
          functional gastric disease 7
            Dyspepsia 5
            gastroparesis + 2
            postgastrectomy syndrome + 0
paths to the root