RGD DISEASE ONTOLOGY - ANNOTATIONS
RGD uses the Human Disease Ontology (DO, https://disease-ontology.org/) for disease curation across species. RGD automatically downloads each new release of the ontology on a monthly basis. Some additional terms which are required for RGD's curation purposes but are not currently covered in the official version of DO have been added. As corresponding terms are added to DO, these custom terms are retired and the DO terms substituted in existing annotations and subsequently used for curation.
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Nos3
nitric oxide synthase 3
ISO
mRNA:decreased expression:pyloric antrum (rat)
RGD
PMID:29071981
RGD:13446417
NCBI chrNW_004955491:5,438,228...5,457,308
Ensembl chrNW_004955491:5,438,010...5,460,814
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Crh
corticotropin releasing hormone
ISO
protein:increased expression:central nucleus of amygdala, paraventricular hypothalamic nucleus (rat)
RGD
PMID:21589865
RGD:5490556
NCBI chrNW_004955444:12,989,210...12,991,300
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Htr3a
5-hydroxytryptamine receptor 3A
ISO
DNA:SNP:promoter:c.-42C>T(human)
RGD
PMID:22014438
RGD:6480658
NCBI chrNW_004955412:15,589,117...15,602,211
Ensembl chrNW_004955412:15,589,117...15,602,211
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Ifng
interferon gamma
treatment
ISO
RGD
PMID:28854971
RGD:14975120
NCBI chrNW_004955458:14,643,333...14,648,020
Ensembl chrNW_004955458:14,643,313...14,648,045
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Il10
interleukin 10
no_association
ISO
DNA:SNP:promoter:-819C>A (rs1800871)(human) DNA:SNP:promoter:-1082G>A (rs1800896)(human)
RGD
PMID:28965252
RGD:14975154
NCBI chrNW_004955406:42,307,789...42,312,255
Ensembl chrNW_004955406:42,307,664...42,312,779
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Slc6a4
solute carrier family 6 member 4
susceptibility
ISO
DNA:polymorphism: : DNA:haplotypes, multiple:
RGD
PMID:22014438 PMID:24720453
RGD:36947385 RGD:6480658
NCBI chrNW_004955481:3,088,440...3,122,421
Ensembl chrNW_004955481:3,088,416...3,125,711
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Hmox1
heme oxygenase 1
ISO
CTD Direct Evidence: therapeutic
CTD
PMID:20378827
NCBI chrNW_004955405:43,124,447...43,128,873
Ensembl chrNW_004955405:43,124,510...43,130,979
Term paths to the root one shortest all shortest one longest all longest one shortest and longest all