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RGD DISEASE ONTOLOGY - ANNOTATIONS

RGD uses the Human Disease Ontology (DO, https://disease-ontology.org/) for disease curation across species. RGD automatically downloads each new release of the ontology on a monthly basis. Some additional terms which are required for RGD's curation purposes but are not currently covered in the official version of DO have been added. As corresponding terms are added to DO, these custom terms are retired and the DO terms substituted in existing annotations and subsequently used for curation.

Term:prostate cancer
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Accession:DOID:10283 term browser browse the term
Definition:A male reproductive organ cancer that is located_in the prostate. (DO)
Synonyms:exact_synonym: NGP - new growth of prostate;   cancer of prostate;   cancer of the prostate;   malignant tumor of prostate;   malignant tumor of the prostate;   prostate cancers;   prostatic cancer;   tumor of the prostate
 narrow_synonym: GEN1-RELATED CONDITION;   GEN1-RELATED PROSTATE CANCER;   PROSTATE CANCER, PROGRESSION AND METASTASIS OF;   familial prostate cancer
 related_synonym: CYP3A4 PROMOTER POLYMORPHISM, Cyp3a4-v;   prostate cancer, susceptibility to;   prostate cancer, susceptibility to, in African Americans
 xref: EFO:0000196;   ICD10CM:C61;   ICD9CM:185;   MIM:176807;   MONDO:0008315;   NCI:C3343;   NCI:C7378;   ORDO:1331
For additional species annotation, visit the Alliance of Genome Resources.


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prostate cancer term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abca3 ATP binding cassette subfamily A member 3 ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936694:1,735,206...1,778,100
Ensembl chrNW_004936694:1,736,207...1,778,116
JBrowse link
G Abcc4 ATP binding cassette subfamily C member 4 (PEL blood group) ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936472:14,396,986...14,624,597
Ensembl chrNW_004936472:14,397,222...14,624,648
JBrowse link
G Abce1 ATP binding cassette subfamily E member 1 ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936535:3,956,490...3,985,002
Ensembl chrNW_004936535:3,955,682...3,985,223
JBrowse link
G Abcf3 ATP binding cassette subfamily F member 3 ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936578:5,670,395...5,680,043
Ensembl chrNW_004936578:5,669,738...5,680,043
JBrowse link
G Abcg4 ATP binding cassette subfamily G member 4 ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936542:4,090,282...4,106,025
Ensembl chrNW_004936542:4,091,283...4,105,370
JBrowse link
G Abtb3 ankyrin repeat and BTB domain containing 3 ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar NCBI chrNW_004936492:7,480,372...7,514,301
Ensembl chrNW_004936492:7,482,250...7,736,269
JBrowse link
G Acp3 acid phosphatase 3 disease_progression ISO PSA/PAP (prostatic acid phosphatase) ratio - a valuable prognostic indicator in men with Stage IV prostate cancer
OMIM:176807 | OMIM:300147 | OMIM:300704 | OMIM:601518 | OMIM:602759 | OMIM:608656 | OMIM:608658 | OMIM:609299 | OMIM:609558 | OMIM:610321 | OMIM:610997 | OMIM:611100 | OMIM:611868 | OMIM:611928 | OMIM:611955 | OMIM:611958 | OMIM:611959
RGD
MouseDO
PMID:16024648 PMID:17991541 RGD:2301054 RGD:2301055 NCBI chrNW_004936529:5,661,772...5,723,108
Ensembl chrNW_004936529:5,661,702...5,725,363
JBrowse link
G Acrv1 acrosomal vesicle protein 1 ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936743:2,047,383...2,053,589 JBrowse link
G Acsl3 acyl-CoA synthetase long chain family member 3 disease_progression
treatment
ISO RGD PMID:27270436 RGD:13831303 NCBI chrNW_004936569:4,774,602...4,842,906
Ensembl chrNW_004936569:4,774,542...4,844,494
JBrowse link
G Adamts3 ADAM metallopeptidase with thrombospondin type 1 motif 3 ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936598:2,680,623...2,901,308
Ensembl chrNW_004936598:2,680,087...2,901,330
JBrowse link
G Adat1 adenosine deaminase tRNA specific 1 ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936475:24,244,412...24,291,111
Ensembl chrNW_004936475:24,266,285...24,289,841
JBrowse link
G Adrm1 ADRM1 26S proteasome ubiquitin receptor ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936514:9,923,956...9,928,168
Ensembl chrNW_004936514:9,923,896...9,928,170
JBrowse link
G Adsl adenylosuccinate lyase severity ISO protein:increased activity:tumor (human) RGD PMID:3690833 RGD:1598760 NCBI chrNW_004936492:1,423,780...1,440,825 JBrowse link
G Afp alpha fetoprotein ISO protein:increased expression:serum RGD PMID:17932343 RGD:2292038 NCBI chrNW_004936598:2,058,474...2,077,711
Ensembl chrNW_004936598:2,058,117...2,077,728
JBrowse link
G Agap2 ArfGAP with GTPase domain, ankyrin repeat and PH domain 2 ISO RGD PMID:19176382 RGD:13838848 NCBI chrNW_004936646:1,865,154...1,881,614
Ensembl chrNW_004936646:1,865,395...1,876,453
JBrowse link
G Ager advanced glycosylation end-product specific receptor ISO mRNA:increased expression:prostate gland (human) RGD PMID:15666359 RGD:7243251 NCBI chrNW_004936727:1,418,342...1,422,005
Ensembl chrNW_004936727:1,418,799...1,422,147
JBrowse link
G Agpat2 1-acylglycerol-3-phosphate O-acyltransferase 2 ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936669:1,185,204...1,198,972
Ensembl chrNW_004936669:1,195,365...1,202,042
JBrowse link
G Ahrr aryl-hydrocarbon receptor repressor ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar NCBI chrNW_004936815:1,031,696...1,045,032 JBrowse link
G Aifm1 apoptosis inducing factor mitochondria associated 1 ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 PMID:28492532 NCBI chrNW_004936479:1,441,508...1,477,133
Ensembl chrNW_004936479:1,441,437...1,478,107
JBrowse link
G Akap1 A-kinase anchoring protein 1 ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936490:5,829,728...5,842,217
Ensembl chrNW_004936490:5,830,973...5,845,441
JBrowse link
G Akt1 AKT serine/threonine kinase 1 severity ISO DNA:SNPs:5' utr, intron: (rs1130214, rs2494738) (human) RGD PMID:21430300 RGD:5509093 NCBI chrNW_004936621:620,163...639,115
Ensembl chrNW_004936621:620,074...639,093
JBrowse link
G Akt2 AKT serine/threonine kinase 2 ISO DNA:SNP: :rs7254617 (human) RGD PMID:22815832 RGD:13504675 NCBI chrNW_004936661:2,652,568...2,694,039
Ensembl chrNW_004936661:2,652,566...2,694,086
JBrowse link
G Akt3 AKT serine/threonine kinase 3 severity ISO DNA:SNP: :rs2125230 (human) RGD PMID:22546513 RGD:13504678 NCBI chrNW_004936526:6,944,056...7,201,226
Ensembl chrNW_004936526:6,944,005...7,200,583
JBrowse link
G Aldh5a1 aldehyde dehydrogenase 5 family member A1 ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936671:843,577...865,798
Ensembl chrNW_004936671:843,577...865,881
JBrowse link
G Aldh9a1 aldehyde dehydrogenase 9 family member A1 ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar NCBI chrNW_004936481:19,630,045...19,650,009 JBrowse link
G Amd1 adenosylmethionine decarboxylase 1 ISO protein:increased expression:prostate RGD PMID:30397274 RGD:14390073 NCBI chrNW_004936564:6,656,789...6,675,564
Ensembl chrNW_004936564:6,656,746...6,673,462
JBrowse link
G Ang angiogenin ISO RGD PMID:11948474 PMID:19276260 RGD:2325697 RGD:2325707 NCBI chrNW_004936880:39,372...40,070 JBrowse link
G Ankrd12 ankyrin repeat domain 12 ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar NCBI chrNW_004936670:2,775,222...2,898,418
Ensembl chrNW_004936670:2,775,242...2,898,408
JBrowse link
G Ano9 anoctamin 9 ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936888:289,309...306,184
Ensembl chrNW_004936888:289,868...302,449
JBrowse link
G Anxa7 annexin A7 ISO protein:decreased expression:prostate gland RGD PMID:17708571 RGD:2292654 NCBI chrNW_004936521:5,639,193...5,671,369
Ensembl chrNW_004936521:5,651,719...5,671,050
JBrowse link
G Ap3b1 adaptor related protein complex 3 subunit beta 1 ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 PMID:28492532 NCBI chrNW_004936549:5,964,240...6,205,245
Ensembl chrNW_004936549:5,965,143...6,204,379
JBrowse link
G Apc APC regulator of WNT signaling pathway disease_progression ISO OMIM:176807 | OMIM:300147 | OMIM:300704 | OMIM:601518 | OMIM:602759 | OMIM:608656 | OMIM:608658 | OMIM:609299 | OMIM:609558 | OMIM:610321 | OMIM:610997 | OMIM:611100 | OMIM:611868 | OMIM:611928 | OMIM:611955 | OMIM:611958 | OMIM:611959 MouseDO
RGD
PMID:16322291 RGD:151665170 NCBI chrNW_004936531:6,899,580...7,019,016
Ensembl chrNW_004936531:6,899,788...7,019,453
JBrowse link
G Ar androgen receptor treatment
no_association
ISO ClinVar Annotator: match by term: Malignant tumor of prostate | ClinVar Annotator: match by term: Prostate cancer
african-american men
RGD
ClinVar
PMID:1307250 PMID:1631125 PMID:1779964 PMID:2594783 PMID:7671849 More... RGD:10043311 RGD:1578686 NCBI chrNW_004936635:485,903...647,820
Ensembl chrNW_004936635:485,903...647,932
JBrowse link
G Arap3 ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 3 ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936504:12,490,838...12,514,256
Ensembl chrNW_004936504:12,490,850...12,513,996
JBrowse link
G Arhgap20 Rho GTPase activating protein 20 ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936612:3,682,673...3,774,032
Ensembl chrNW_004936612:3,682,622...3,776,022
JBrowse link
G Arhgef15 Rho guanine nucleotide exchange factor 15 ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 PMID:28492532 NCBI chrNW_004936595:1,531,694...1,545,206
Ensembl chrNW_004936595:1,534,717...1,543,448
JBrowse link
G Arhgef25 Rho guanine nucleotide exchange factor 25 ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936646:1,754,803...1,762,996
Ensembl chrNW_004936646:1,754,727...1,764,544
JBrowse link
G Arhgef40 Rho guanine nucleotide exchange factor 40 ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar NCBI chrNW_004936880:277,002...293,489
Ensembl chrNW_004936880:274,488...292,742
JBrowse link
G Armc12 armadillo repeat containing 12 ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936476:23,538,020...23,562,126
Ensembl chrNW_004936476:23,537,987...23,555,667
JBrowse link
G Arpp21 cAMP regulated phosphoprotein 21 ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936473:25,475,845...25,625,095
Ensembl chrNW_004936473:25,474,728...25,625,095
JBrowse link
G Asic2 acid sensing ion channel subunit 2 ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936538:938,266...2,011,154
Ensembl chrNW_004936538:938,752...2,011,177
JBrowse link
G Asprv1 aspartic peptidase retroviral like 1 ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936491:14,170,232...14,171,830
Ensembl chrNW_004936491:14,170,793...14,171,830
JBrowse link
G Atf3 activating transcription factor 3 disease_progression
treatment
ISO RGD PMID:26522727 PMID:26944919 RGD:13506816 RGD:13506817 NCBI chrNW_004936557:909,302...922,619
Ensembl chrNW_004936557:908,318...922,624
JBrowse link
G Atg13 autophagy related 13 ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936562:2,424,398...2,473,103
Ensembl chrNW_004936562:2,423,001...2,473,232
JBrowse link
G Atl3 atlastin GTPase 3 ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar NCBI chrNW_004936599:5,442,060...5,503,298
Ensembl chrNW_004936599:5,442,063...5,503,318
JBrowse link
G Atm ATM serine/threonine kinase ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23807571 PMID:25614872 PMID:25741868 PMID:28492532 NCBI chrNW_004936551:359,134...534,672
Ensembl chrNW_004936551:359,362...532,211
JBrowse link
G Atp1a1 ATPase Na+/K+ transporting subunit alpha 1 ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936627:1,555,151...1,584,370
Ensembl chrNW_004936627:1,554,873...1,584,638
JBrowse link
G Atp2b4 ATPase plasma membrane Ca2+ transporting 4 ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936567:944,825...1,039,920
Ensembl chrNW_004936567:950,797...993,245
JBrowse link
G Atp6v0a1 ATPase H+ transporting V0 subunit a1 ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936490:17,235,661...17,296,589
Ensembl chrNW_004936490:17,235,661...17,296,633
JBrowse link
G Azgp1 alpha-2-glycoprotein 1, zinc-binding ISO protein:increased expression:serum RGD PMID:11309332 RGD:153350158 NCBI chrNW_004936543:105,983...113,475
Ensembl chrNW_004936543:105,956...114,190
JBrowse link
G B3galt1 beta-1,3-galactosyltransferase 1 ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936469:11,586,710...12,133,053
Ensembl chrNW_004936469:11,589,492...11,590,472
JBrowse link
G Babam2 BRISC and BRCA1 A complex member 2 ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936493:4,375,393...4,863,050
Ensembl chrNW_004936493:4,375,393...4,768,399
JBrowse link
G Bag1 BAG cochaperone 1 ISO DNA, protein:amplification, increased expression:prostate gland RGD PMID:17503439 RGD:2293885 NCBI chrNW_004936524:1,793,001...1,804,145
Ensembl chrNW_004936524:1,791,119...1,804,151
JBrowse link
G Bax BCL2 associated X, apoptosis regulator ISO RGD PMID:17575222 PMID:18444130 RGD:1643354 RGD:2292907 NCBI chrNW_004936664:2,968,103...2,973,652
Ensembl chrNW_004936664:2,967,865...2,973,820
JBrowse link
G Bcl2 BCL2 apoptosis regulator disease_progression ISO RGD PMID:16984224 PMID:17850375 PMID:18084610 RGD:2292512 RGD:2293015 RGD:2293017 NCBI chrNW_004936497:2,209,136...2,373,580
Ensembl chrNW_004936497:2,210,334...2,210,921
JBrowse link
G Bglap bone gamma-carboxyglutamate protein ISO RGD PMID:12565780 RGD:6483580 NCBI chrNW_004936580:5,480,023...5,482,288
Ensembl chrNW_004936580:5,481,355...5,482,155
JBrowse link
G Bicral BICRA like chromatin remodeling complex associated protein ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936476:17,037,595...17,111,786
Ensembl chrNW_004936476:17,040,595...17,081,141
JBrowse link
G Bik BCL2 interacting killer ISO RGD PMID:14633680 RGD:14394816
G Birc5 baculoviral IAP repeat containing 5 severity ISO mRNA:increased expression:prostate gland RGD PMID:17804712 PMID:18336887 RGD:2293091 RGD:2293100 NCBI chrNW_004936594:2,812,165...2,820,618
Ensembl chrNW_004936594:2,812,238...2,820,636
JBrowse link
G Bltp2 bridge-like lipid transfer protein family member 2 ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936538:4,837,557...4,865,811
Ensembl chrNW_004936538:4,837,557...4,865,814
JBrowse link
G Bmp2 bone morphogenetic protein 2 disease_progression
susceptibility
ISO DNA:amplification:prostate gland RGD PMID:15042598 PMID:17656261 RGD:2289030 RGD:2299981 NCBI chrNW_004936485:12,428,765...12,439,570
Ensembl chrNW_004936485:12,428,710...12,439,454
JBrowse link
G Bmp6 bone morphogenetic protein 6 ISO protein:increased expression:prostate RGD PMID:18072288 RGD:2289017 NCBI chrNW_004936534:4,707,658...4,871,865
Ensembl chrNW_004936534:4,709,064...4,871,023
JBrowse link
G Bmp7 bone morphogenetic protein 7 susceptibility ISO protein:decreased expression:prostate gland
DNA:amplification:prostate gland
RGD PMID:15861517 PMID:17656261 RGD:2289030 RGD:2289031 NCBI chrNW_004936530:71,965...143,940
Ensembl chrNW_004936530:71,920...143,940
JBrowse link
G Bnip5 BCL2 interacting protein 5 ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936476:23,046,420...23,057,057
Ensembl chrNW_004936476:23,045,547...23,055,588
JBrowse link
G Brca1 BRCA1 DNA repair associated no_association
severity
ISO ClinVar Annotator: match by term: Malignant tumor of prostate
DNA:deletions: :185_186del,1294_1333del,3875_3878del
RGD
ClinVar
PMID:10398279 PMID:12491487 PMID:15235020 PMID:15447980 PMID:16267036 More... RGD:2289042 RGD:734657 NCBI chrNW_004936490:17,735,444...17,801,456 JBrowse link
G Brca2 BRCA2 DNA repair associated disease_progression ISO DNA:mutation
ClinVar Annotator: match by term: Malignant tumor of prostate | ClinVar Annotator: match by term: Prostate cancer
RGD
ClinVar
OMIM
PMID:1 PMID:278235 PMID:1772447 PMID:2200631 PMID:2661312 More... RGD:2289042 NCBI chrNW_004936472:26,945,659...27,017,693 JBrowse link
G Brf2 BRF2 general transcription factor IIIB subunit ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 PMID:25741868 NCBI chrNW_004936710:1,296,475...1,301,752
Ensembl chrNW_004936710:1,293,129...1,301,048
JBrowse link
G Btbd16 BTB domain containing 16 ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936486:11,112,148...11,155,652
Ensembl chrNW_004936486:11,110,228...11,155,580
JBrowse link
G C2cd6 C2 calcium dependent domain containing 6 ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936726:734,269...867,709 JBrowse link
G C3ar1 complement C3a receptor 1 ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936892:347,547...355,143
Ensembl chrNW_004936892:347,842...349,296
JBrowse link
G C5 complement C5 ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936487:9,391,774...9,474,168
Ensembl chrNW_004936487:9,391,804...9,474,159
JBrowse link
G Cabin1 calcineurin binding protein 1 ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936619:890,474...1,030,914
Ensembl chrNW_004936619:890,299...1,030,899
JBrowse link
G Cacna1d calcium voltage-gated channel subunit alpha1 D ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936473:4,164,633...4,479,866
Ensembl chrNW_004936473:4,037,533...4,478,073
JBrowse link
G Cadm1 cell adhesion molecule 1 ISO DNA:hypermethylation:promoter RGD PMID:12079507 RGD:2289091 NCBI chrNW_004936542:569,739...883,738
Ensembl chrNW_004936542:565,843...883,609
JBrowse link
G Cadm3 cell adhesion molecule 3 ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936740:1,298,512...1,331,376
Ensembl chrNW_004936740:1,299,043...1,331,453
JBrowse link
G Cadps calcium dependent secretion activator ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936637:3,543,615...4,023,710
Ensembl chrNW_004936637:3,545,211...4,022,630
JBrowse link
G Camk2n1 calcium/calmodulin dependent protein kinase II inhibitor 1 disease_progression ISO mRNA, protein:decreased expression:prostate gland RGD PMID:25003983 PMID:31762801 RGD:18337271 RGD:18337280 NCBI chrNW_004936474:6,463,691...6,466,641
Ensembl chrNW_004936474:6,461,050...6,466,641
JBrowse link
G Cand1 cullin associated and neddylation dissociated 1 ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936545:5,217,947...5,255,596
Ensembl chrNW_004936545:5,218,407...5,255,245
JBrowse link
G Capn6 calpain 6 ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936499:4,041,837...4,060,895
Ensembl chrNW_004936499:4,035,664...4,060,895
JBrowse link
G Cask calcium/calmodulin dependent serine protein kinase ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936502:7,933,312...8,281,492
Ensembl chrNW_004936502:7,937,146...8,281,492
JBrowse link
G Casp3 caspase 3 ISO RGD PMID:18253123 RGD:2293304 NCBI chrNW_004936554:4,571,072...4,593,765 JBrowse link
G Casr calcium sensing receptor ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:28492532 NCBI chrNW_004936536:8,574,064...8,599,446
Ensembl chrNW_004936536:8,574,064...8,599,454
JBrowse link
G Cav1 caveolin 1 disease_progression ISO protein:increased expression:serum
DNA:hypermethylation:promoter
RGD PMID:11170154 PMID:14506154 PMID:15948133 RGD:2289104 RGD:2289109 RGD:2289112 NCBI chrNW_004936589:2,504,235...2,536,778
Ensembl chrNW_004936589:2,504,224...2,537,170
JBrowse link
G Cbx1 chromobox 1 ISO protein:increased expression:prostate: RGD PMID:18436254 RGD:9586744 NCBI chrNW_004936490:13,242,949...13,261,195
Ensembl chrNW_004936490:13,242,949...13,261,195
JBrowse link
G Cbx3 chromobox 3 ISO protein:increased expression:prostate: RGD PMID:18436254 RGD:9586744 NCBI chrNW_004936478:2,981,218...2,989,329
Ensembl chrNW_004936478:2,981,228...2,989,324
JBrowse link
G Cbx5 chromobox 5 ISO protein:increased expression:prostate: RGD PMID:18436254 RGD:9586744 NCBI chrNW_004936512:11,441,770...11,480,924
Ensembl chrNW_004936512:11,450,060...11,480,727
JBrowse link
G Cbx7 chromobox 7 ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936492:2,411,171...2,428,484
Ensembl chrNW_004936492:2,410,308...2,428,682
JBrowse link
G Cby1 chibby 1, beta catenin antagonist ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936492:2,677,502...2,681,845
Ensembl chrNW_004936492:2,677,502...2,681,511
JBrowse link
G Ccdc171 coiled-coil domain containing 171 ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936771:1,529,313...1,714,148 JBrowse link
G Ccna1 cyclin A1 disease_progression ISO human gene, mouse model RGD PMID:18612129 RGD:2316302 NCBI chrNW_004936472:30,574,957...30,586,596
Ensembl chrNW_004936472:30,573,812...30,586,559
JBrowse link
G Ccnb1 cyclin B1 ISO RGD PMID:18006855 RGD:2293596 NCBI chrNW_004936480:400,287...407,677
Ensembl chrNW_004936480:399,224...407,704
JBrowse link
G Ccnd1 cyclin D1 ISO RGD PMID:17908994 RGD:2289128 Ensembl chrNW_004936599:973,838...983,316 JBrowse link
G Ccnd2 cyclin D2 disease_progression ISO DNA, mRNA:hyperymethylation, decreased expression:promoter, prostate gland RGD PMID:16322291 PMID:17016690 RGD:151665170 RGD:2289151 NCBI chrNW_004936606:4,474,801...4,496,158
Ensembl chrNW_004936606:4,474,749...4,496,810
JBrowse link
G Ccnd3 cyclin D3 disease_progression ISO RGD PMID:18317945 RGD:2316009 NCBI chrNW_004936476:17,799,754...17,886,835
Ensembl chrNW_004936476:17,879,869...17,886,827
JBrowse link
G Cd2 CD2 molecule ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar NCBI chrNW_004936627:1,902,120...1,915,257
Ensembl chrNW_004936627:1,902,120...1,915,257
JBrowse link
G Cd244 CD244 molecule ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936903:146,108...162,410 JBrowse link
G Cd2ap CD2 associated protein ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:28492532 NCBI chrNW_004936476:12,890,595...12,989,046
Ensembl chrNW_004936476:12,890,468...12,987,843
JBrowse link
G Cd44 CD44 molecule (IN blood group) disease_progression ISO DNA:hypermethylation:prostate gland RGD PMID:17998819 RGD:2289346 NCBI chrNW_004936533:2,949,026...3,033,166 JBrowse link
G Cd55 CD55 molecule (Cromer blood group) ISO RGD PMID:16533428 PMID:18288643 RGD:2326167 RGD:2326168 NCBI chrNW_004936557:5,344,373...5,364,234 JBrowse link
G Cd82 CD82 molecule disease_progression ISO protein:decreased expression:prostate gland RGD PMID:12497033 RGD:2289404
G Cdc25a cell division cycle 25A ISO RGD PMID:18974148 RGD:2743964 NCBI chrNW_004936596:1,657,411...1,680,109
Ensembl chrNW_004936596:1,659,159...1,678,788
JBrowse link
G Cdc25b cell division cycle 25B ISO protein:increased expression:prostate gland RGD PMID:12569365 RGD:4105454 NCBI chrNW_004936485:14,897,050...14,914,034 JBrowse link
G Cdc25c cell division cycle 25C ISO mRNA, protein:alternative form, increased expression, increased activity:prostate gland RGD PMID:12896904 PMID:16000564 PMID:16140946 PMID:17460776 RGD:2756028 RGD:2774210 RGD:2776427 RGD:4105453 NCBI chrNW_004936531:7,471,722...7,499,781
Ensembl chrNW_004936531:7,471,722...7,499,766
JBrowse link
G Cdh1 cadherin 1 disease_progression
susceptibility
ISO protein:decreased expression:prostate gland
ClinVar Annotator: match by term: Malignant tumor of prostate | ClinVar Annotator: match by term: PROSTATE CANCER, SUSCEPTIBILITY TO | ClinVar Annotator: match by term: Prostate cancer
DNA:polymorphism:promoter:-160C>A (human)
RGD
ClinVar
PMID:1722187 PMID:2403327 PMID:2449335 PMID:8075649 PMID:9537325 More... RGD:2289487 RGD:2289493 NCBI chrNW_004936475:18,990,529...19,065,954
Ensembl chrNW_004936475:18,990,474...19,067,203
JBrowse link
G Cdh13 cadherin 13 disease_progression ISO DNA:hypermethylation:promoter RGD PMID:18387661 RGD:2293539 NCBI chrNW_004936641:3,925,185...4,223,421
Ensembl chrNW_004936641:3,931,033...4,224,101
JBrowse link
G Cdh3 cadherin 3 ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 PMID:28492532 NCBI chrNW_004936475:18,908,031...18,954,402
Ensembl chrNW_004936475:18,906,493...18,955,072
JBrowse link
G Cdk13 cyclin dependent kinase 13 ISO mRNA,protein:increased expression:prostate: RGD PMID:33390186 RGD:155641232 NCBI chrNW_004936478:15,296,055...15,387,749
Ensembl chrNW_004936478:15,296,055...15,388,309
JBrowse link
G Cdk2 cyclin dependent kinase 2 ISO RGD PMID:16648554 RGD:2293560 NCBI chrNW_004936646:379,849...385,648
Ensembl chrNW_004936646:379,842...385,877
JBrowse link
G Cdk4 cyclin dependent kinase 4 ISO RGD PMID:16648554 RGD:2293560 NCBI chrNW_004936646:1,886,262...1,889,260 JBrowse link
G Cdkn1a cyclin dependent kinase inhibitor 1A ISO RGD PMID:18237448 RGD:2289639 NCBI chrNW_004936476:22,717,308...22,725,127
Ensembl chrNW_004936476:22,717,260...22,725,182
JBrowse link
G Cdkn2aip CDKN2A interacting protein ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936554:5,638,671...5,642,276
Ensembl chrNW_004936554:5,639,448...5,642,092
JBrowse link
G Cdkn2b cyclin dependent kinase inhibitor 2B disease_progression ISO protein:increased expression:prostate gland RGD PMID:16799475 RGD:2289684 NCBI chrNW_004936652:3,576,975...3,582,790
Ensembl chrNW_004936652:3,538,986...3,581,159
JBrowse link
G Cfap43 cilia and flagella associated protein 43 ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936600:1,954,987...2,042,834 JBrowse link
G Cfap65 cilia and flagella associated protein 65 ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936569:1,449,654...1,462,582 JBrowse link
G Chac1 ChaC glutathione specific gamma-glutamylcyclotransferase 1 ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936471:4,344,234...4,346,998
Ensembl chrNW_004936471:4,344,053...4,346,913
JBrowse link
G Chaf1b chromatin assembly factor 1 subunit B disease_progression ISO ClinVar Annotator: match by term: Malignant tumor of prostate
protein:increased expression:prostate:
ClinVar
RGD
PMID:19309489 PMID:23265383 RGD:9587461 NCBI chrNW_004936500:6,262,207...6,288,833
Ensembl chrNW_004936500:6,262,229...6,288,839
JBrowse link
G Chd1 chromodomain helicase DNA binding protein 1 ISO DNA:deletions: : RGD PMID:22179824 RGD:9587750 NCBI chrNW_004936523:4,945,650...5,016,209
Ensembl chrNW_004936523:4,945,650...5,018,145
JBrowse link
G Chd2 chromodomain helicase DNA binding protein 2 ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar NCBI chrNW_004936483:9,803,887...9,931,132
Ensembl chrNW_004936483:9,803,623...9,931,272
JBrowse link
G Chek1 checkpoint kinase 1 ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936743:2,004,535...2,027,287
Ensembl chrNW_004936743:2,005,851...2,026,587
JBrowse link
G Chek2 checkpoint kinase 2 susceptibility ISO ClinVar Annotator: match by term: Malignant tumor of prostate | ClinVar Annotator: match by term: Prostate cancer | ClinVar Annotator: match by term: Prostate cancer, susceptibility to
DNA:mutations: :multiple
ClinVar
RGD
OMIM
PMID:3313277 PMID:9536098 PMID:10617473 PMID:11053450 PMID:11298456 More... RGD:2289707 NCBI chrNW_004936657:2,805,947...2,848,180
Ensembl chrNW_004936657:2,805,959...2,848,180
JBrowse link
G Chga chromogranin A susceptibility ISO DNA:missense mutation:cds:p.E264D (human) RGD PMID:20663522 RGD:6906901 NCBI chrNW_004936733:915,700...927,220
Ensembl chrNW_004936733:915,830...927,409
JBrowse link
G Chgb chromogranin B ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936485:13,126,152...13,140,340
Ensembl chrNW_004936485:13,126,113...13,140,569
JBrowse link
G Chic1 cysteine rich hydrophobic domain 1 ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar NCBI chrNW_004936683:397,609...491,491
Ensembl chrNW_004936683:397,568...463,398
JBrowse link
G Chuk component of inhibitor of nuclear factor kappa B kinase complex ISO protein:increased serine phosphorylation:prostate gland RGD PMID:26435478 RGD:13504773 NCBI chrNW_004936636:33,933...78,990
Ensembl chrNW_004936636:33,673...79,194
JBrowse link
G Ckap5 cytoskeleton associated protein 5 ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936562:2,269,341...2,369,098
Ensembl chrNW_004936562:2,269,332...2,371,224
JBrowse link
G Clptm1l CLPTM1 like ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936815:421,996...445,577
Ensembl chrNW_004936815:428,920...445,750
JBrowse link
G Cnga1 cyclic nucleotide gated channel subunit alpha 1 ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:28492532 NCBI chrNW_004936482:14,091,343...14,107,793
Ensembl chrNW_004936482:14,091,913...14,107,787
JBrowse link
G Cntfr ciliary neurotrophic factor receptor ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936524:2,636,166...2,674,488
Ensembl chrNW_004936524:2,636,166...2,674,192
JBrowse link
G Cog1 component of oligomeric golgi complex 1 ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936655:1,020,363...1,032,847
Ensembl chrNW_004936655:1,017,169...1,032,816
JBrowse link
G Col1a1 collagen type I alpha 1 chain ISO ClinVar Annotator: match by term: Prostate cancer ClinVar PMID:17211858 PMID:23265383 PMID:25741868 PMID:28492532 NCBI chrNW_004936490:11,448,552...11,465,836
Ensembl chrNW_004936490:11,448,654...11,464,444
JBrowse link
G Col24a1 collagen type XXIV alpha 1 chain ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar NCBI chrNW_004936865:473,968...814,756
Ensembl chrNW_004936865:474,340...814,819
JBrowse link
G Col5a1 collagen type V alpha 1 chain ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936669:2,474,381...2,613,541
Ensembl chrNW_004936669:2,476,818...2,580,891
JBrowse link
G Comt catechol-O-methyltransferase susceptibility
no_association
disease_progression
ISO DNA:polymorphism:cds
DNA:polymorphism: :p.V158M
RGD PMID:16126332 PMID:16492910 PMID:17507624 RGD:2289718 RGD:2289719 RGD:2289720 NCBI chrNW_004936619:3,847,059...3,883,866
Ensembl chrNW_004936619:3,876,299...3,882,747
JBrowse link
G Cops6 COP9 signalosome subunit 6 ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936543:235,087...237,779
Ensembl chrNW_004936543:235,089...240,440
JBrowse link
G Corin corin, serine peptidase ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936482:13,782,571...13,999,561
Ensembl chrNW_004936482:13,743,433...13,999,348
JBrowse link
G Cpa6 carboxypeptidase A6 ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936496:6,484,438...6,761,816
Ensembl chrNW_004936496:6,484,438...6,761,816
JBrowse link
G Cpsf7 cleavage and polyadenylation specific factor 7 ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936581:1,629,078...1,651,147
Ensembl chrNW_004936581:1,629,041...1,651,328
JBrowse link
G Crtc3 CREB regulated transcription coactivator 3 ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936483:16,356,663...16,465,128
Ensembl chrNW_004936483:16,356,689...16,455,073
JBrowse link
G Csmd2 CUB and Sushi multiple domains 2 ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936474:16,323,899...16,607,712
Ensembl chrNW_004936474:16,326,666...16,866,720
JBrowse link
G Ctnna1 catenin alpha 1 disease_progression ISO protein:decreased expression:prostate gland RGD PMID:16334164 PMID:17639504 RGD:2289791 RGD:2289793 NCBI chrNW_004936531:7,865,907...8,036,020
Ensembl chrNW_004936531:7,865,820...8,037,935
JBrowse link
G Ctnnb1 catenin beta 1 ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:9927029 PMID:23265383 NCBI chrNW_004936473:29,999,542...30,034,610
Ensembl chrNW_004936473:29,999,562...30,038,293
JBrowse link
G Ctse cathepsin E ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936557:6,485,783...6,498,805
Ensembl chrNW_004936557:6,485,755...6,498,833
JBrowse link
G Cttnbp2 cortactin binding protein 2 ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar NCBI chrNW_004936589:1,385,342...1,522,911
Ensembl chrNW_004936589:1,393,141...1,522,048
JBrowse link
G Cxcl12 C-X-C motif chemokine ligand 12 ameliorates ISO human cells in mouse model RGD PMID:30537000 RGD:152025215 NCBI chrNW_004936617:4,224,131...4,239,080
Ensembl chrNW_004936617:4,224,131...4,238,796
JBrowse link
G Cxcr4 C-X-C motif chemokine receptor 4 ameliorates ISO human cells in mouse model RGD PMID:30537000 RGD:152025215 NCBI chrNW_004936469:39,794,613...39,798,448
Ensembl chrNW_004936469:39,794,584...39,798,459
JBrowse link
G Cysltr1 cysteinyl leukotriene receptor 1 ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936547:479,261...504,757 JBrowse link
G Dab2ip DAB2 interacting protein treatment ISO human cells in mouse model RGD PMID:25015118 RGD:401901597 NCBI chrNW_004936487:10,056,809...10,243,021
Ensembl chrNW_004936487:10,145,278...10,243,174
JBrowse link
G Daxx death domain associated protein disease_progression ISO RGD PMID:23642739 RGD:9587815 NCBI chrNW_004936476:25,546,091...25,550,390
Ensembl chrNW_004936476:25,546,036...25,550,392
JBrowse link
G Dchs2 dachsous cadherin-related 2 ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936576:987,927...1,169,210
Ensembl chrNW_004936576:988,868...1,119,150
JBrowse link
G Ddx50 DExD-box helicase 50 ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar NCBI chrNW_004936521:9,463,049...9,493,341
Ensembl chrNW_004936521:9,458,329...9,493,319
JBrowse link
G Ddx60 DExD/H-box helicase 60 ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar NCBI chrNW_004936516:649,217...735,499
Ensembl chrNW_004936516:649,191...731,639
JBrowse link
G Deaf1 DEAF1 transcription factor ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 PMID:28492532 NCBI chrNW_004936888:473,651...497,152
Ensembl chrNW_004936888:473,974...497,158
JBrowse link
G Dgat2l6 diacylglycerol O-acyltransferase 2 like 6 ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936762:1,262,374...1,268,979
Ensembl chrNW_004936762:1,262,870...1,281,432
JBrowse link
G Dgcr6l DiGeorge syndrome critical region gene 6 like ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936619:4,203,792...4,209,417 JBrowse link
G Dhdh dihydrodiol dehydrogenase ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar NCBI chrNW_004936664:2,955,538...2,964,709
Ensembl chrNW_004936664:2,955,479...2,964,784
JBrowse link
G Dhx29 DExH-box helicase 29 ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936480:12,458,834...12,504,207
Ensembl chrNW_004936480:12,458,843...12,504,202
JBrowse link
G Dis3l DIS3 like exosome 3'-5' exoribonuclease ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936471:26,477,014...26,515,380
Ensembl chrNW_004936471:26,477,166...26,515,995
JBrowse link
G Dlat dihydrolipoamide S-acetyltransferase ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936612:2,395,452...2,437,592
Ensembl chrNW_004936612:2,393,071...2,437,522
JBrowse link
G Dll1 delta like canonical Notch ligand 1 ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004937098:212,704...220,589
Ensembl chrNW_004937098:213,227...220,427
JBrowse link
G Dnah3 dynein axonemal heavy chain 3 ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936501:6,194,009...6,351,842
Ensembl chrNW_004936501:6,194,054...6,351,842
JBrowse link
G Dnah8 dynein axonemal heavy chain 8 ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936476:20,592,440...20,888,692
Ensembl chrNW_004936476:20,592,440...20,888,779
JBrowse link
G Dnah9 dynein axonemal heavy chain 9 ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936595:4,338,831...4,671,178
Ensembl chrNW_004936595:4,338,831...4,670,498
JBrowse link
G Dnajc3 DnaJ heat shock protein family (Hsp40) member C3 ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:25466870 PMID:28940199 NCBI chrNW_004936472:14,055,548...14,126,173
Ensembl chrNW_004936472:14,055,532...14,126,211
JBrowse link
G Dnajc6 DnaJ heat shock protein family (Hsp40) member C6 ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:22563501 PMID:23211418 PMID:26528954 PMID:28492532 NCBI chrNW_004936692:2,788,477...2,836,094
Ensembl chrNW_004936692:2,741,632...2,834,078
JBrowse link
G Dnmt1 DNA methyltransferase 1 disease_progression ISO protein:increased expression:nucleus: RGD PMID:24038143 RGD:9588628 NCBI chrNW_004936659:520,181...565,496
Ensembl chrNW_004936659:520,493...565,416
JBrowse link
G Dock2 dedicator of cytokinesis 2 ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar NCBI chrNW_004936609:4,695,202...5,099,038
Ensembl chrNW_004936609:4,695,628...5,099,038
JBrowse link
G Dock5 dedicator of cytokinesis 5 ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar NCBI chrNW_004936757:1,289,941...1,419,257
Ensembl chrNW_004936757:1,289,954...1,576,984
JBrowse link
G Dph7 diphthamide biosynthesis 7 ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936669:517,169...530,866
Ensembl chrNW_004936669:517,021...530,582
JBrowse link
G Dppa4 developmental pluripotency associated 4 ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936645:2,888,131...2,903,396
Ensembl chrNW_004936645:2,888,259...2,895,735
JBrowse link
G Dpyd dihydropyrimidine dehydrogenase ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936537:1,660,461...2,439,305
Ensembl chrNW_004936537:1,660,477...2,439,273
JBrowse link
G Dscaml1 DS cell adhesion molecule like 1 ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936542:2,619,910...2,939,578
Ensembl chrNW_004936542:2,620,469...2,939,578
JBrowse link
G Dusp1 dual specificity phosphatase 1 disease_progression ISO RGD PMID:9010448 RGD:2298698 NCBI chrNW_004936609:2,688,170...2,691,057
Ensembl chrNW_004936609:2,688,181...2,690,408
JBrowse link
G Dym dymeclin ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936497:13,476,376...13,816,515
Ensembl chrNW_004936497:13,476,326...13,818,059
JBrowse link
G E2f1 E2F transcription factor 1 ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar NCBI chrNW_004936561:6,894,827...6,901,058
Ensembl chrNW_004936561:6,896,063...6,900,026
JBrowse link
G E2f3 E2F transcription factor 3 disease_progression ISO RGD PMID:15184867 PMID:17701752 PMID:25017995 RGD:13504717 RGD:13504729 RGD:13504730 NCBI chrNW_004936552:5,712,247...5,783,643
Ensembl chrNW_004936552:5,711,923...5,783,694
JBrowse link
G E2f5 E2F transcription factor 5 ISO mRNA,protein:increased expression:prostate: RGD PMID:33390186 RGD:155641232 NCBI chrNW_004936544:124,243...153,325
Ensembl chrNW_004936544:125,360...152,670
JBrowse link
G Eaf2 ELL associated factor 2 ISO protein:decreased expression:prostate gland RGD PMID:12907652 RGD:634486 NCBI chrNW_004936536:8,213,794...8,257,595
Ensembl chrNW_004936536:8,213,763...8,258,201
JBrowse link
G Eef2 eukaryotic translation elongation factor 2 ISO protein:increased expression:prostate (human) RGD PMID:24589652 RGD:153297816 NCBI chrNW_004936588:2,259,236...2,267,692
Ensembl chrNW_004936588:2,258,309...2,266,609
JBrowse link
G Efcab6 EF-hand calcium binding domain 6 ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936718:1,293,088...1,501,664
Ensembl chrNW_004936718:1,293,322...1,517,952
JBrowse link
G Egfr epidermal growth factor receptor ISO RGD PMID:18467313 RGD:2293731 NCBI chrNW_004936678:365,005...560,546
Ensembl chrNW_004936678:365,834...436,528
JBrowse link
G Eif3h eukaryotic translation initiation factor 3 subunit H disease_progression ISO mRNA:increased expression:prostate gland
DNA:amplification
RGD PMID:10362802 PMID:11733359 RGD:2289901 RGD:2289902 NCBI chrNW_004936470:29,509,154...29,606,124
Ensembl chrNW_004936470:29,509,151...29,606,124
JBrowse link
G Eif4g3 eukaryotic translation initiation factor 4 gamma 3 ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936474:6,718,719...7,004,066
Ensembl chrNW_004936474:6,719,370...7,004,972
JBrowse link
G Emilin1 elastin microfibril interfacer 1 ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar NCBI chrNW_004936493:5,455,369...5,463,205
Ensembl chrNW_004936493:5,455,197...5,463,223
JBrowse link
G Eng endoglin severity ISO protein:increased expression:tumor, vasculature (human) RGD PMID:23262399 RGD:7248770 NCBI chrNW_004936487:15,467,165...15,499,180
Ensembl chrNW_004936487:15,467,835...15,477,488
JBrowse link
G Eno2 enolase 2 ISO RGD PMID:15239127 RGD:2293734 NCBI chrNW_004936709:904,647...913,445
Ensembl chrNW_004936709:904,031...913,451
JBrowse link
G Enox1 ecto-NOX disulfide-thiol exchanger 1 ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936747:380,813...709,258
Ensembl chrNW_004936747:502,895...709,663
JBrowse link
G Enpp7 ectonucleotide pyrophosphatase/phosphodiesterase 7 ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936594:3,855,071...3,864,034
Ensembl chrNW_004936594:3,855,150...3,858,317
JBrowse link
G Entpd3 ectonucleoside triphosphate diphosphohydrolase 3 ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936473:29,348,370...29,382,258
Ensembl chrNW_004936473:29,348,318...29,382,270
JBrowse link
G Entrep1 endosomal transmembrane epsin interactor 1 ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936503:5,611,867...5,671,947
Ensembl chrNW_004936503:5,610,573...5,672,308
JBrowse link
G Ep300 E1A binding protein p300 disease_progression ISO RGD PMID:14633682 RGD:2289907 NCBI chrNW_004936492:696,982...778,132
Ensembl chrNW_004936492:696,960...778,138
JBrowse link
G Ephb1 EPH receptor B1 susceptibility ISO DNA:SNPs,haplptype:multiple RGD PMID:21603658 RGD:153305950 NCBI chrNW_004936529:8,006,780...8,261,923
Ensembl chrNW_004936529:7,839,768...8,261,942
JBrowse link
G Epsti1 epithelial stromal interaction 1 ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar NCBI chrNW_004936747:900,889...989,590 JBrowse link
G Erbb2 erb-b2 receptor tyrosine kinase 2 ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936490:14,887,062...14,910,038
Ensembl chrNW_004936490:14,887,043...14,909,956
JBrowse link
G Erbb3 erb-b2 receptor tyrosine kinase 3 disease_progression ISO protein:altered localization:nucleus
ClinVar Annotator: match by term: Malignant tumor of prostate
RGD
ClinVar
PMID:17532856 PMID:23265383 RGD:2289946 NCBI chrNW_004936646:497,783...515,247
Ensembl chrNW_004936646:498,749...513,297
JBrowse link
G Erbb4 erb-b2 receptor tyrosine kinase 4 ISO protein:increased expression:prostate gland RGD PMID:17922460 RGD:2289978 NCBI chrNW_004936586:4,065,767...5,100,690
Ensembl chrNW_004936586:4,066,498...5,100,035
JBrowse link
G Erbin erbb2 interacting protein ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936480:3,155,934...3,293,224
Ensembl chrNW_004936480:3,154,690...3,293,230
JBrowse link
G Ercc2 ERCC excision repair 2, TFIIH core complex helicase subunit susceptibility ISO DNA:missense mutation:cds:p.D312N (human)
DNA:polymorphism:exon:p.R156R(human)
RGD PMID:17695467 PMID:24649009 RGD:5688739 RGD:8657136 NCBI chrNW_004936706:1,816,561...1,829,638
Ensembl chrNW_004936706:1,816,571...1,829,692
JBrowse link
G Esr1 estrogen receptor 1 susceptibility
severity
disease_progression
ISO DNA:repeat
DNA:hypermethylation:promoter
mRNA:increased expression:prostate gland
RGD PMID:17908481 PMID:17922863 PMID:18006911 RGD:2290020 RGD:2290022 RGD:2290023 NCBI chrNW_004936489:4,616,839...4,887,179
Ensembl chrNW_004936489:4,614,754...4,887,171
JBrowse link
G Esr2 estrogen receptor 2 susceptibility ISO DNA:snps, haplotype:multiple (human) RGD PMID:17932344 RGD:8694101 NCBI chrNW_004936495:7,956,168...8,018,356
Ensembl chrNW_004936495:7,956,766...8,004,357
JBrowse link
G Exoc2 exocyst complex component 2 ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 PMID:25741868 NCBI chrNW_004936633:1,657,326...1,848,113
Ensembl chrNW_004936633:1,657,320...1,848,407
JBrowse link
G Eya1 EYA transcriptional coactivator and phosphatase 1 ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936648:395,526...546,705
Ensembl chrNW_004936648:395,524...546,729
JBrowse link
G Ezh2 enhancer of zeste 2 polycomb repressive complex 2 subunit severity ISO protein:increased expression:prostate gland (human) RGD PMID:17134822 RGD:10755355 NCBI chrNW_004936527:5,024,077...5,069,152
Ensembl chrNW_004936527:5,024,068...5,063,939
JBrowse link
G F2 coagulation factor II, thrombin ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936562:2,371,725...2,388,617
Ensembl chrNW_004936562:2,372,044...2,388,650
JBrowse link
G F5 coagulation factor V ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936481:17,114,441...17,178,902
Ensembl chrNW_004936481:17,114,480...17,178,844
JBrowse link
G Fabp5 fatty acid binding protein 5 ISO mRNA:increased expression:prostate (human) RGD PMID:16489065 RGD:1578462 NCBI chrNW_004936656:2,881,552...2,886,192 JBrowse link
G Fam13c family with sequence similarity 13 member C ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936614:3,730,478...3,846,535
Ensembl chrNW_004936614:3,730,471...3,848,252
JBrowse link
G Fam83c family with sequence similarity 83 member C ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936561:5,463,602...5,469,265
Ensembl chrNW_004936561:5,463,594...5,469,743
JBrowse link
G Fanca FA complementation group A ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:10094191 PMID:24728327 PMID:25741868 PMID:26181256 PMID:28492532 More... NCBI chrNW_004936641:281,119...319,796
Ensembl chrNW_004936641:281,073...324,053
JBrowse link
G Fas Fas cell surface death receptor severity
disease_progression
ISO DNA:polymorphism RGD PMID:17667965 PMID:18237448 RGD:2289639 RGD:2290050 NCBI chrNW_004936735:209,369...234,582 JBrowse link
G Faxc failed axon connections homolog, metaxin like GST domain containing ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936651:900,932...965,188
Ensembl chrNW_004936651:902,301...964,447
JBrowse link
G Fbh1 F-box DNA helicase 1 ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936484:8,635,752...8,689,949
Ensembl chrNW_004936484:8,635,753...8,689,971
JBrowse link
G Fbn2 fibrillin 2 ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936504:1,535,629...1,757,386
Ensembl chrNW_004936504:1,535,624...1,757,435
JBrowse link
G Fbxl5 F-box and leucine rich repeat protein 5 ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar NCBI chrNW_004936477:12,279,521...12,312,927
Ensembl chrNW_004936477:12,279,541...12,313,007
JBrowse link
G Fgd1 FYVE, RhoGEF and PH domain containing 1 ISO protein:increased expression:prostate gland (human) RGD PMID:19141649 RGD:11554027 NCBI chrNW_004936751:1,355,606...1,397,282
Ensembl chrNW_004936751:1,351,795...1,397,288
JBrowse link
G Fgd2 FYVE, RhoGEF and PH domain containing 2 ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936476:22,423,851...22,442,795
Ensembl chrNW_004936476:22,424,042...22,442,689
JBrowse link
G Fgf7 fibroblast growth factor 7 ISO mRNA:increased expression:prostate gland stroma, hormone insensitive tumors RGD PMID:9285567 RGD:2289086 NCBI chrNW_004936471:11,636,733...11,692,782
Ensembl chrNW_004936471:11,635,876...11,693,821
JBrowse link
G Fgfr1 fibroblast growth factor receptor 1 disease_progression ISO RGD PMID:24027026 RGD:13504747 NCBI chrNW_004936710:1,760,365...1,815,269
Ensembl chrNW_004936710:1,760,089...1,815,508
JBrowse link
G Fgfr2 fibroblast growth factor receptor 2 disease_progression
no_association
ISO mRNA:decreased expression:prostate:isoforms IIIb and IIIc, decrease in IIIb associated with progression to androgen-independence
mRNA:splice variant::shift from Fgfr2IIIb to Fgfr2IIIc in malignancy, restoration of Fgfr2IIIb slows growth
DNA:mutation,polymorphism:exons:no mutations or polymorphisms found in patient or cell line DNA to explain changes in expression seen in other studies
mRNA:increased expression:prostate gland
mRNA:alternative form:prostate:switch from isoform IIIb to IIIc
RGD PMID:9285567 PMID:9537256 PMID:11069376 PMID:11170144 PMID:12111699 RGD:2289086 RGD:2289728 RGD:2289746 RGD:2289845 RGD:2289859 NCBI chrNW_004936486:10,506,680...10,606,272
Ensembl chrNW_004936486:10,507,097...10,602,019
JBrowse link
G Fgfr4 fibroblast growth factor receptor 4 disease_progression ISO DNA:SNP:exon 9: 288G>A, p.G388R (human) RGD PMID:15448004 RGD:150429969 NCBI chrNW_004936597:1,388,394...1,397,731
Ensembl chrNW_004936597:1,385,624...1,397,758
JBrowse link
G Fhip1b FHF complex subunit HOOK interacting protein 1B ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:25741868 NCBI chrNW_004936842:280,718...306,311
Ensembl chrNW_004936842:280,718...306,285
JBrowse link
G Fhit fragile histidine triad diadenosine triphosphatase ISO DNA:SNP:intron:increased risk in carriers of minor allele of SNP rs760317
DNA:SNP:intron:reduced risk in carriers of minor allele of SNP rs760317
DNA:hypermethylation:promoter:methylation percentage 15% in tumors vs no methylation in nonmalignant prostate
RGD PMID:11839671 PMID:15705877 PMID:17548701 RGD:2289869 RGD:2289878 RGD:2289896 NCBI chrNW_004936473:397,140...1,424,805
Ensembl chrNW_004936473:676,237...1,424,506
JBrowse link
G Flt3 fms related receptor tyrosine kinase 3 ISO RGD PMID:14977818 RGD:2302209 NCBI chrNW_004936472:23,169,967...23,239,178
Ensembl chrNW_004936472:23,170,470...23,256,904
JBrowse link
G Foxo1 forkhead box O1 disease_progression ISO mRNA:decreased expression:tumor:lower in high versus low Gleason score tumors, also lower in tumor vs adjacent normal tissue (p<0.05 compared to at least one housekeeping gene) RGD PMID:18336616 RGD:2301729 NCBI chrNW_004936565:5,210,014...5,299,213
Ensembl chrNW_004936565:5,210,014...5,302,436
JBrowse link
G Foxo3 forkhead box O3 ISO mRNA:decreased expression:tumor:lower in tumor vs adjacent normal tissue (p<0.05 compared to at least one housekeeping gene) RGD PMID:18336616 RGD:2301729 NCBI chrNW_004936564:4,788,036...4,907,600
Ensembl chrNW_004936564:4,787,992...4,903,837
JBrowse link
G Frem2 FRAS1 related extracellular matrix 2 ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936565:6,671,578...6,837,514
Ensembl chrNW_004936565:6,671,737...6,837,514
JBrowse link
G Gabrb2 gamma-aminobutyric acid type A receptor subunit beta2 ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 PMID:25741868 PMID:28492532 NCBI chrNW_004936515:2,127,107...2,359,697
Ensembl chrNW_004936515:2,127,693...2,355,090
JBrowse link
G Gabrg1 gamma-aminobutyric acid type A receptor subunit gamma1 ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936482:12,390,328...12,473,904
Ensembl chrNW_004936482:12,392,248...12,474,056
JBrowse link
G Gapdhs glyceraldehyde-3-phosphate dehydrogenase, spermatogenic ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936570:819,562...830,072
Ensembl chrNW_004936570:819,387...829,087
JBrowse link
G Gdf10 growth differentiation factor 10 ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936554:7,292,805...7,307,001
Ensembl chrNW_004936554:7,292,767...7,307,009
JBrowse link
G Gen1 GEN1 Holliday junction 5' flap endonuclease ISO ClinVar Annotator: match by term: GEN1-related condition | ClinVar Annotator: match by term: GEN1-related prostate cancer ClinVar PMID:25741868 PMID:28492532 NCBI chrNW_004936493:13,157,114...13,182,797
Ensembl chrNW_004936493:13,157,119...13,177,525
JBrowse link
G Get3 guided entry of tail-anchored proteins factor 3, ATPase ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar NCBI chrNW_004936659:1,851,953...1,858,176
Ensembl chrNW_004936659:1,851,051...1,858,322
JBrowse link
G Gfra3 GDNF family receptor alpha 3 ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936531:7,443,842...7,457,518
Ensembl chrNW_004936531:7,444,147...7,464,523
JBrowse link
G Gli1 GLI family zinc finger 1 ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936646:1,622,308...1,629,787
Ensembl chrNW_004936646:1,622,308...1,629,779
JBrowse link
G Gngt1 G protein subunit gamma transducin 1 ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936803:67,933...71,508
Ensembl chrNW_004936803:67,608...71,541
JBrowse link
G Gnpat glyceronephosphate O-acyltransferase ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936484:19,414,094...19,434,929
Ensembl chrNW_004936484:19,410,956...19,434,929
JBrowse link
G Golm1 golgi membrane protein 1 ISO protein,mRNA:increased expression:prostate RGD PMID:29181846 RGD:401827116 NCBI chrNW_004936680:1,463,991...1,528,322 JBrowse link
G Gphn gephyrin ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936495:9,970,683...10,565,467
Ensembl chrNW_004936495:9,972,007...10,564,591
JBrowse link
G Gpr26 G protein-coupled receptor 26 ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936486:12,192,117...12,211,497
Ensembl chrNW_004936486:12,191,509...12,210,890
JBrowse link
G Gpr55 G protein-coupled receptor 55 ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936525:5,869,416...5,888,789
Ensembl chrNW_004936525:5,869,416...5,888,789
JBrowse link
G Gpr82 G protein-coupled receptor 82 ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936502:8,100,698...8,102,349
Ensembl chrNW_004936502:8,098,580...8,102,349
JBrowse link
G Grb2 growth factor receptor bound protein 2 treatment
disease_progression
ISO DNA:amplification, mutation RGD PMID:17372910 PMID:28930697 RGD:13504750 RGD:13504751 NCBI chrNW_004936594:592,760...661,369
Ensembl chrNW_004936594:592,740...661,369
JBrowse link
G Grid1 glutamate ionotropic receptor delta type subunit 1 ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar NCBI chrNW_004936804:487,609...1,182,335
Ensembl chrNW_004936804:488,427...1,182,100
JBrowse link
G Grin1 glutamate ionotropic receptor NMDA type subunit 1 ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936669:814,330...838,881
Ensembl chrNW_004936669:814,330...839,208
JBrowse link
G Grm8 glutamate metabotropic receptor 8 ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936479:13,768,014...14,504,387
Ensembl chrNW_004936479:13,770,088...14,494,569
JBrowse link
G Grp gastrin releasing peptide ISO protein:increased expression:serum (human) RGD PMID:30146822 RGD:401700396 NCBI chrNW_004936497:5,473,293...5,487,344
Ensembl chrNW_004936497:5,476,800...5,487,358
JBrowse link
G Grwd1 glutamate rich WD repeat containing 1 ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936664:2,548,178...2,555,234
Ensembl chrNW_004936664:2,547,789...2,555,887
JBrowse link
G Gstp1 glutathione S-transferase pi 1 susceptibility ISO DNA:polymorphism:exon:p.I105V (human) RGD PMID:9111193 PMID:17067754 RGD:4142515 RGD:6906883 NCBI chrNW_004936599:2,197,681...2,200,642
Ensembl chrNW_004936599:2,197,634...2,201,050
JBrowse link
G Gusb glucuronidase beta ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936543:7,721,273...7,732,468
Ensembl chrNW_004936543:7,721,763...7,731,897
JBrowse link
G Hebp2 heme binding protein 2 ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936560:5,558,022...5,565,816
Ensembl chrNW_004936560:5,557,843...5,566,708
JBrowse link
G Hepacam2 HEPACAM family member 2 ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar NCBI chrNW_004936803:663,950...693,530
Ensembl chrNW_004936803:656,770...693,499
JBrowse link
G Hhipl1 HHIP like 1 ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936604:3,426,361...3,446,103 JBrowse link
G Hif1a hypoxia inducible factor 1 subunit alpha ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936495:5,770,988...5,816,157
Ensembl chrNW_004936495:5,770,669...5,816,157
JBrowse link
G Hipk4 homeodomain interacting protein kinase 4 ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936661:2,764,661...2,770,110
Ensembl chrNW_004936661:2,764,661...2,770,110
JBrowse link
G Hlf HLF transcription factor, PAR bZIP family member ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936490:7,273,051...7,324,681
Ensembl chrNW_004936490:7,273,112...7,324,687
JBrowse link
G Hmcn1 hemicentin 1 ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936481:4,212,713...4,494,469
Ensembl chrNW_004936481:4,213,631...4,589,464
JBrowse link
G Hnrnpk heterogeneous nuclear ribonucleoprotein K ISO protein:increased expression:prostate gland (human) RGD PMID:19401687 RGD:10054425 NCBI chrNW_004936828:827,660...839,088
Ensembl chrNW_004936828:828,837...838,720
JBrowse link
G Hoxb13 homeobox B13 ISO ClinVar Annotator: match by term: PROSTATE CANCER, SUSCEPTIBILITY TO ClinVar PMID:8756292 PMID:15964834 PMID:17138648 PMID:22236224 PMID:22714738 More... NCBI chrNW_004936490:12,688,572...12,690,908
Ensembl chrNW_004936490:12,688,559...12,690,908
JBrowse link
G Hps3 HPS3 biogenesis of lysosomal organelles complex 2 subunit 1 ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936519:6,470,077...6,530,897
Ensembl chrNW_004936519:6,466,212...6,499,101
JBrowse link
G Htr2c 5-hydroxytryptamine receptor 2C ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936499:1,002,083...1,109,446
Ensembl chrNW_004936499:1,004,732...1,109,377
JBrowse link
G Htr5a 5-hydroxytryptamine receptor 5A ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936527:9,534,723...9,547,235
Ensembl chrNW_004936527:9,534,903...9,543,574
JBrowse link
G Htra2 HtrA serine peptidase 2 ISO mRNA, protein:increased expression:prostate (human) RGD PMID:17207090 RGD:5688749 NCBI chrNW_004936556:741,718...746,016
Ensembl chrNW_004936556:741,718...749,090
JBrowse link
G Ibtk inhibitor of Bruton tyrosine kinase ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936510:8,345,182...8,425,080
Ensembl chrNW_004936510:8,346,357...8,423,487
JBrowse link
G Icam1 intercellular adhesion molecule 1 ISO RGD PMID:19536890 RGD:4145511 NCBI chrNW_004936659:616,570...627,172
Ensembl chrNW_004936659:616,752...627,174
JBrowse link
G Ifih1 interferon induced with helicase C domain 1 ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936469:16,721,306...16,778,249
Ensembl chrNW_004936469:16,721,677...16,774,903
JBrowse link
G Ift43 intraflagellar transport 43 ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936488:5,011,792...5,090,980
Ensembl chrNW_004936488:5,011,642...5,091,007
JBrowse link
G Igf1r insulin like growth factor 1 receptor disease_progression ISO RGD PMID:28972962 RGD:13504752 NCBI chrNW_004936483:4,563,995...4,860,231
Ensembl chrNW_004936483:4,564,512...4,852,925
JBrowse link
G Igf2r insulin like growth factor 2 receptor ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936489:11,447,043...11,523,695
Ensembl chrNW_004936489:11,447,038...11,524,174
JBrowse link
G Igfbp3 insulin like growth factor binding protein 3 severity
no_association
ISO DNA:SNP:promoter:rs2854744 C allele associated with low grade tumors only, odds ratio=4.1 for low grade vs 1.0 for high grade
DNA:SNP:promoter:no association with rs2854744, 440 cases and 480 related controls from Cleveland, OH and Detroit, MI
DNA:SNP:promoter:rs2854744, homozygous C allele associated with 2x increased risk
RGD PMID:15006930 PMID:17668637 PMID:17724372 RGD:2290008 RGD:2290012 RGD:2290015 NCBI chrNW_004936478:20,511,490...20,518,251
Ensembl chrNW_004936478:20,510,137...20,518,306
JBrowse link
G Ikbkb inhibitor of nuclear factor kappa B kinase subunit beta ISO protein:increased serine phosphorylation:prostate gland RGD PMID:26435478 RGD:13504773 NCBI chrNW_004936785:358,128...406,751
Ensembl chrNW_004936785:356,168...406,773
JBrowse link
G Il16 interleukin 16 ISO DNA:SNP:exon:rs4072111 (human) RGD PMID:18264096 RGD:2293182 NCBI chrNW_004936483:19,417,580...19,512,654
Ensembl chrNW_004936483:19,418,086...19,512,639
JBrowse link
G Il33 interleukin 33 ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936539:763,755...791,461
Ensembl chrNW_004936539:623,248...791,470
JBrowse link
G Ilk integrin linked kinase disease_progression ISO mRNA:decreased expression:tumor:lower in high versus low Gleason score tumors (p<0.05 compared to at least one housekeeping gene)
protein:decreased expression:tumor:significantly lower in benign prostatic hyperplasia then any prostate cancer (p<0.01), gradient of expression from BPH to poorly differentiated C+D stage neoplasms
RGD PMID:15704679 PMID:18336616 RGD:2301729 RGD:2301731 NCBI chrNW_004936842:661,961...667,993
Ensembl chrNW_004936842:661,996...667,993
JBrowse link
G Impg2 interphotoreceptor matrix proteoglycan 2 ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 PMID:25741868 NCBI chrNW_004936630:1,982,860...2,069,472
Ensembl chrNW_004936630:1,982,783...2,071,953
JBrowse link
G Ing4 inhibitor of growth family member 4 ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936709:1,140,485...1,147,982
Ensembl chrNW_004936709:1,140,345...1,149,843
JBrowse link
G Inha inhibin subunit alpha ISO mRNA,protein:decreased expression:malignant tumors RGD PMID:9506758 RGD:2290384 NCBI chrNW_004936569:1,949,747...1,954,179
Ensembl chrNW_004936569:1,950,297...1,954,165
JBrowse link
G Inmt indolethylamine N-methyltransferase ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936478:6,997,605...7,002,649
Ensembl chrNW_004936478:6,997,549...7,002,666
JBrowse link
G Ins insulin disease_progression ISO RGD PMID:27599544 RGD:13504777 NCBI chrNW_004936816:1,002,137...1,003,357
Ensembl chrNW_004936816:1,002,137...1,003,357
JBrowse link
G Ints3 integrator complex subunit 3 ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936580:3,511,364...3,553,441
Ensembl chrNW_004936580:3,511,311...3,553,756
JBrowse link
G Ints8 integrator complex subunit 8 ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936544:7,784,093...7,839,646
Ensembl chrNW_004936544:7,784,242...7,839,565
JBrowse link
G Irgq immunity related GTPase Q ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936706:790,878...799,100
Ensembl chrNW_004936706:790,963...798,969
JBrowse link
G Itgad integrin subunit alpha D ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936543:8,382,942...8,412,486
Ensembl chrNW_004936543:8,382,942...8,411,350
JBrowse link
G Itgb6 integrin subunit beta 6 ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936469:18,581,855...18,650,109
Ensembl chrNW_004936469:18,581,840...18,650,123
JBrowse link
G Itih5 inter-alpha-trypsin inhibitor heavy chain 5 ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936484:7,123,022...7,207,166
Ensembl chrNW_004936484:7,122,921...7,203,002
JBrowse link
G Itpripl1 ITPRIP like 1 ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936744:425,206...428,220
Ensembl chrNW_004936744:426,516...428,156
JBrowse link
G Jak1 Janus kinase 1 severity ISO DNA:frameshift mutations RGD PMID:29121062 RGD:150524355 NCBI chrNW_004936692:2,298,149...2,354,084
Ensembl chrNW_004936692:2,299,504...2,354,132
JBrowse link
G Jup junction plakoglobin severity ISO DNA,mRNA,protein:loss of heterozygosity, decreased expression:tumor:relative to either BPH or normal prostate
protein:increased expression:tumor:significantly associated with capsular invasion (p=0.007 for all cases, p=0.015 for cases with Gleason score 5-7)
RGD PMID:10206308 PMID:15781623 RGD:2291864 RGD:2291876 NCBI chrNW_004936490:16,671,176...16,694,552
Ensembl chrNW_004936490:16,668,575...16,694,615
JBrowse link
G Kat7 lysine acetyltransferase 7 ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936490:11,775,224...11,805,489
Ensembl chrNW_004936490:11,772,046...11,805,759
JBrowse link
G Katnal2 katanin catalytic subunit A1 like 2 ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936983:37,876...75,556
Ensembl chrNW_004936983:25,386...73,791
JBrowse link
G Kcnf1 potassium voltage-gated channel modifier subfamily F member 1 ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936532:6,963,912...6,968,463 JBrowse link
G Kcnj1 potassium inwardly rectifying channel subfamily J member 1 ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936572:3,396,329...3,425,848
Ensembl chrNW_004936572:3,421,557...3,425,276
JBrowse link
G Kcnj4 potassium inwardly rectifying channel subfamily J member 4 ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936492:2,865,803...2,867,657
Ensembl chrNW_004936492:2,865,879...2,867,201
JBrowse link
G Kcnn3 potassium calcium-activated channel subfamily N member 3 ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936580:4,277,219...4,426,242
Ensembl chrNW_004936580:4,277,217...4,426,493
JBrowse link
G Kcnq3 potassium voltage-gated channel subfamily Q member 3 ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936470:16,712,508...17,009,648
Ensembl chrNW_004936470:16,712,703...17,009,397
JBrowse link
G Kcnq5 potassium voltage-gated channel subfamily Q member 5 ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 PMID:28492532 NCBI chrNW_004936618:4,283,240...4,815,571
Ensembl chrNW_004936618:4,283,349...4,812,036
JBrowse link
G Kdm3a lysine demethylase 3A ISO mRNA:increased expression:prostate (human)
mRNA:increased expression:prostate gland (human)
RGD PMID:20127736 PMID:22120715 RGD:9586733 RGD:9587486 NCBI chrNW_004936712:1,053,210...1,097,845
Ensembl chrNW_004936712:1,053,210...1,096,961
JBrowse link
G Kdm4a lysine demethylase 4A ISO mRNA:increased expression:prostate (human) RGD PMID:22120715 RGD:9586733 NCBI chrNW_004936474:25,002,527...25,056,642
Ensembl chrNW_004936474:25,002,509...25,056,642
JBrowse link
G Kdm4b lysine demethylase 4B ISO mRNA:increased expression:prostate (human) RGD PMID:22120715 RGD:9586733 NCBI chrNW_004936588:2,908,970...3,005,625
Ensembl chrNW_004936588:2,908,899...3,005,674
JBrowse link
G Kdm4c lysine demethylase 4C severity ISO mRNA:increased expression:prostate gland (human) RGD PMID:20127736 RGD:9587486 NCBI chrNW_004936539:1,198,105...1,580,078
Ensembl chrNW_004936539:1,198,147...1,580,082
JBrowse link
G Kdm5a lysine demethylase 5A ISO mRNA:decreased expression:prostate gland (human) RGD PMID:24200674 RGD:9587761 NCBI chrNW_004936606:486,424...570,546
Ensembl chrNW_004936606:485,655...570,739
JBrowse link
G Kdm5b lysine demethylase 5B severity ISO mRNA:increased expression:prostate gland (human) RGD PMID:18048344 RGD:9587744 NCBI chrNW_004936567:1,782,056...1,860,861
Ensembl chrNW_004936567:1,781,995...1,863,461
JBrowse link
G Kdm6a lysine demethylase 6A ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936502:10,980,303...11,196,711
Ensembl chrNW_004936502:10,980,118...11,196,163
JBrowse link
G Kdr kinase insert domain receptor ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936482:17,537,697...17,581,320
Ensembl chrNW_004936482:17,538,864...17,581,002
JBrowse link
G Kiaa1755 KIAA1755 ortholog ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936561:3,099,398...3,136,885
Ensembl chrNW_004936561:3,099,392...3,136,966
JBrowse link
G Kif12 kinesin family member 12 ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936487:3,421,646...3,428,311
Ensembl chrNW_004936487:3,421,646...3,427,038
JBrowse link
G Kif16b kinesin family member 16B ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936485:3,443,878...3,728,613
Ensembl chrNW_004936485:3,443,878...3,726,174
JBrowse link
G Kif5a kinesin family member 5A ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 PMID:28492532 NCBI chrNW_004936646:1,697,531...1,730,376
Ensembl chrNW_004936646:1,697,492...1,732,832
JBrowse link
G Klf6 KLF transcription factor 6 ISO OMIM NCBI chrNW_004936484:10,470,384...10,476,682
Ensembl chrNW_004936484:10,470,332...10,478,119
JBrowse link
G Klhl20 kelch like family member 20 ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936481:14,074,169...14,111,634
Ensembl chrNW_004936481:14,071,470...14,111,838
JBrowse link
G Klk4 kallikrein related peptidase 4 ISO protein:increased expression:prostate gland RGD PMID:12370833 PMID:17545602 RGD:2314854 RGD:2314857 NCBI chrNW_004936889:583,259...586,412
Ensembl chrNW_004936889:583,302...586,412
JBrowse link
G Klk6 kallikrein related peptidase 6 ISO protein:decreased expression:prostate RGD PMID:12970725 RGD:2314865 NCBI chrNW_004936889:621,645...628,454
Ensembl chrNW_004936889:621,630...629,678
JBrowse link
G Kmt2a lysine methyltransferase 2A ISO mRNA:decreased expression:prostate gland (human) RGD PMID:24200674 RGD:9587761 NCBI chrNW_004936542:3,480,071...3,566,823
Ensembl chrNW_004936542:3,391,774...3,562,147
JBrowse link
G Kmt2b lysine methyltransferase 2B ISO mRNA:decreased expression:prostate gland (human) RGD PMID:24200674 RGD:9587761 NCBI chrNW_004936570:583,616...605,846
Ensembl chrNW_004936570:583,616...605,603
JBrowse link
G Kmt2c lysine methyltransferase 2C ISO mRNA:decreased expression:prostate gland (human) RGD PMID:24200674 RGD:9587761 NCBI chrNW_004936527:7,310,885...7,508,032
Ensembl chrNW_004936527:7,312,721...7,506,365
JBrowse link
G Kmt2d lysine methyltransferase 2D ISO mRNA:decreased expression:prostate gland (human) RGD PMID:24200674 RGD:9587761 NCBI chrNW_004936512:6,819,240...6,860,852
Ensembl chrNW_004936512:6,822,057...6,854,451
JBrowse link
G Kmt2e lysine methyltransferase 2E (inactive) ISO mRNA:decreased expression:prostate gland (human) RGD PMID:24200674 RGD:9587761 NCBI chrNW_004936479:18,674,657...18,764,177
Ensembl chrNW_004936479:18,675,413...18,738,983
JBrowse link
G Kmt5a lysine methyltransferase 5A ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936558:1,346,040...1,366,601 JBrowse link
G Kntc1 kinetochore associated 1 ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar NCBI chrNW_004936558:1,936,946...2,016,474
Ensembl chrNW_004936558:1,937,048...2,016,447
JBrowse link
G Kprp keratinocyte proline rich protein ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar NCBI chrNW_004936580:2,761,588...2,763,435
Ensembl chrNW_004936580:2,761,588...2,763,435
JBrowse link
G Kras KRAS proto-oncogene, GTPase ISO OMIM:176807 | OMIM:300147 | OMIM:300704 | OMIM:601518 | OMIM:602759 | OMIM:608656 | OMIM:608658 | OMIM:609299 | OMIM:609558 | OMIM:610321 | OMIM:610997 | OMIM:611100 | OMIM:611868 | OMIM:611928 | OMIM:611955 | OMIM:611958 | OMIM:611959 MouseDO NCBI chrNW_004936548:2,078,568...2,113,877
Ensembl chrNW_004936548:2,079,036...2,110,523
JBrowse link
G Krt1 keratin 1 ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936512:10,084,764...10,090,312
Ensembl chrNW_004936512:10,084,763...10,090,414
JBrowse link
G Krt9 keratin 9 ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936490:16,477,991...16,481,797 JBrowse link
G Lama5 laminin subunit alpha 5 ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936514:9,928,234...9,973,425
Ensembl chrNW_004936514:9,928,316...9,973,349
JBrowse link
G Larp1b La ribonucleoprotein 1B ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936642:2,652,009...2,742,177 JBrowse link
G Lcor ligand dependent nuclear receptor corepressor ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar NCBI chrNW_004936636:2,594,777...2,720,153
Ensembl chrNW_004936636:2,595,394...2,626,824
JBrowse link
G Lef1 lymphoid enhancer binding factor 1 ISO associated with prostate cancer RGD PMID:27067790 RGD:11531513 NCBI chrNW_004936818:453,635...569,194
Ensembl chrNW_004936818:453,635...567,469
JBrowse link
G Lig4 DNA ligase 4 treatment ISO RGD PMID:16638864 RGD:13204720 NCBI chrNW_004936472:3,861,833...3,867,943
Ensembl chrNW_004936472:3,861,866...3,867,933
JBrowse link
G Lman1l lectin, mannose binding 1 like ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936471:33,785,650...33,797,726
Ensembl chrNW_004936471:33,785,748...33,797,575
JBrowse link
G Lmln leishmanolysin like peptidase ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar NCBI chrNW_004936784:93,734...164,686
Ensembl chrNW_004936784:93,725...164,968
JBrowse link
G LOC101956833 keratin, type I cuticular Ha3-I ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936490:16,294,365...16,299,268 JBrowse link
G LOC101957075 protein HIRA ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936619:3,282,170...3,380,151
Ensembl chrNW_004936619:3,282,173...3,380,151
JBrowse link
G LOC101957772 BEN domain-containing protein 5 ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936474:29,600,130...29,647,142
Ensembl chrNW_004936474:29,599,327...29,647,228
JBrowse link
G LOC101958833 ceramide synthase 3 ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936483:3,276,519...3,365,054
Ensembl chrNW_004936483:3,206,110...3,229,939
Ensembl chrNW_004936483:3,206,110...3,229,939
JBrowse link
G LOC101960714 cone-rod homeobox protein ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936664:1,408,618...1,419,096
Ensembl chrNW_004936664:1,409,229...1,419,234
JBrowse link
G LOC101963005 magnesium-dependent phosphatase 1 ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936722:339,510...344,928
Ensembl chrNW_004936722:339,500...342,993
JBrowse link
G LOC101964013 mucin-17 ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936543:976,794...987,062 JBrowse link
G LOC101964876 olfactory receptor 2Z1 ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936588:5,431,595...5,432,539
Ensembl chrNW_004936588:5,431,595...5,432,539
JBrowse link
G LOC101969148 cytochrome P450 1A1 ISO RGD PMID:12949934 RGD:14700953 NCBI chrNW_004936471:33,682,730...33,688,332
Ensembl chrNW_004936471:33,682,730...33,688,332
JBrowse link
G LOC101970767 steroid 17-alpha-hydroxylase/17,20 lyase ISO RGD PMID:18645193 RGD:4846627 NCBI chrNW_004936600:3,097,620...3,102,713
Ensembl chrNW_004936600:3,097,638...3,102,713
JBrowse link
G LOC101970831 serotransferrin ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936529:6,917,762...6,947,512
Ensembl chrNW_004936529:6,855,958...6,947,394
JBrowse link
G LOC101973797 fMet-Leu-Phe receptor ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004937026:155,550...156,608
Ensembl chrNW_004937026:155,550...156,608
JBrowse link
G LOC101974020 myosin-3 ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 PMID:25741868 PMID:28492532 PMID:31030430 NCBI chrNW_004936595:3,484,323...3,507,227
Ensembl chrNW_004936595:3,484,330...3,507,191
JBrowse link
G LOC101974150 WD repeat and FYVE domain-containing protein 3 ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936738:31,426...150,463
Ensembl chrNW_004936738:1,841...147,264
JBrowse link
G LOC101975419 vascular non-inflammatory molecule 2 ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar NCBI chrNW_004936560:760,550...779,218 JBrowse link
G LOC106145452 kallikrein-10 susceptibility ISO DNA:SNP:exon:p.A50S (human) RGD PMID:11920956 RGD:2314851 NCBI chrNW_004936889:663,114...666,067
Ensembl chrNW_004936889:663,573...667,519
JBrowse link
G Lonp2 lon peptidase 2, peroxisomal ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936475:1,480,723...1,584,757
Ensembl chrNW_004936475:1,480,670...1,584,445
JBrowse link
G Lrp1 LDL receptor related protein 1 ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar NCBI chrNW_004936646:1,326,900...1,407,236
Ensembl chrNW_004936646:1,327,374...1,406,456
JBrowse link
G Lrp1b LDL receptor related protein 1B ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936469:35,000,773...36,160,216
Ensembl chrNW_004936469:35,203,594...36,159,283
JBrowse link
G Lrp6 LDL receptor related protein 6 ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936587:5,065,200...5,143,029
Ensembl chrNW_004936587:4,978,043...5,140,191
JBrowse link
G Lrpap1 LDL receptor related protein associated protein 1 ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936477:20,234,582...20,250,756
Ensembl chrNW_004936477:20,234,533...20,250,751
JBrowse link
G Macf1 microtubule actin crosslinking factor 1 ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936474:21,053,755...21,401,336
Ensembl chrNW_004936474:21,178,791...21,400,147
JBrowse link
G Mad1l1 mitotic arrest deficient 1 like 1 ISO ClinVar Annotator: match by term: Malignant tumor of prostate OMIM
ClinVar
PMID:11423979 PMID:25741868 NCBI chrNW_004936754:1,842,588...1,957,116 JBrowse link
G Magi2 membrane associated guanylate kinase, WW and PDZ domain containing 2 ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936479:21,373,917...22,062,498
Ensembl chrNW_004936479:21,373,746...21,920,214
JBrowse link
G Mamdc2 MAM domain containing 2 ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936503:6,212,385...6,374,144
Ensembl chrNW_004936503:6,212,536...6,374,147
JBrowse link
G Maml1 mastermind like transcriptional coactivator 1 ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936739:1,006,273...1,051,338
Ensembl chrNW_004936739:1,006,705...1,050,394
JBrowse link
G Mamld1 mastermind like domain containing 1 ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar NCBI chrNW_004936714:1,941,974...2,042,246
Ensembl chrNW_004936714:1,951,966...2,042,394
JBrowse link
G Map2k5 mitogen-activated protein kinase kinase 5 ISO protein:increased expression RGD PMID:12618764 RGD:2298795 NCBI chrNW_004936471:27,491,255...27,728,572
Ensembl chrNW_004936471:27,491,342...27,728,607
JBrowse link
G Map2k7 mitogen-activated protein kinase kinase 7 ISO mRNA:splice variant:exon 2: (human) RGD PMID:32601196 RGD:155230826 NCBI chrNW_004936588:4,882,191...4,891,807
Ensembl chrNW_004936588:4,882,184...4,892,071
JBrowse link
G Map3k7 mitogen-activated protein kinase kinase kinase 7 ISO DNA:deletion RGD PMID:17785553 RGD:2298803 NCBI chrNW_004936510:1,772,971...1,836,075
Ensembl chrNW_004936510:1,772,971...1,837,765
JBrowse link
G Mapk10 mitogen-activated protein kinase 10 ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936896:228,908...539,836
Ensembl chrNW_004936896:230,494...540,071
JBrowse link
G Mapk7 mitogen-activated protein kinase 7 ISO RGD PMID:18071319 RGD:2298796 NCBI chrNW_004936881:372,713...377,655
Ensembl chrNW_004936881:372,810...377,214
JBrowse link
G Mapt microtubule associated protein tau ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936541:2,381,411...2,479,984 JBrowse link
G Mcc MCC regulator of WNT signaling pathway ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar NCBI chrNW_004936597:4,930,065...5,191,311
Ensembl chrNW_004936597:4,934,788...5,376,481
JBrowse link
G Med1 mediator complex subunit 1 ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936490:14,625,201...14,663,184
Ensembl chrNW_004936490:14,625,897...14,657,802
JBrowse link
G Mmp13 matrix metallopeptidase 13 disease_progression ISO protein:increased expression:plasma:higher concentration in patients with metastases vs non-metastatic PCa, BPH or control patients RGD PMID:15517230 RGD:2293604 NCBI chrNW_004936551:5,040,084...5,050,384
Ensembl chrNW_004936551:5,040,084...5,050,384
JBrowse link
G Mmp15 matrix metallopeptidase 15 disease_progression ISO RGD PMID:15928670 RGD:2290417 NCBI chrNW_004936475:9,951,876...9,971,631
Ensembl chrNW_004936475:9,951,778...9,971,666
JBrowse link
G Mmp2 matrix metallopeptidase 2 disease_progression ISO protein:increased expression:prostate gland RGD PMID:18329693 RGD:2290389 NCBI chrNW_004936475:7,801,356...7,825,831
Ensembl chrNW_004936475:7,801,277...7,825,851
JBrowse link
G Mmp7 matrix metallopeptidase 7 ISO RGD PMID:15894268 RGD:9685352 NCBI chrNW_004936551:5,388,456...5,395,071
Ensembl chrNW_004936551:5,388,459...5,395,071
JBrowse link
G Mrpl46 mitochondrial ribosomal protein L46 ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936483:14,488,549...14,497,772
Ensembl chrNW_004936483:14,488,666...14,497,747
JBrowse link
G Msh2 mutS homolog 2 disease_progression ISO RGD PMID:16217293 RGD:2293513 NCBI chrNW_004936508:4,943,987...5,013,356
Ensembl chrNW_004936508:4,944,007...5,013,356
JBrowse link
G Msh6 mutS homolog 6 ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:25741868 PMID:28492532 NCBI chrNW_004936508:4,708,661...4,728,671
Ensembl chrNW_004936508:4,708,661...4,728,787
JBrowse link
G Msmb microseminoprotein beta ISO OMIM:176807 | OMIM:300147 | OMIM:300704 | OMIM:601518 | OMIM:602759 | OMIM:608656 | OMIM:608658 | OMIM:609299 | OMIM:609558 | OMIM:610321 | OMIM:610997 | OMIM:611100 | OMIM:611868 | OMIM:611928 | OMIM:611955 | OMIM:611958 | OMIM:611959 MouseDO NCBI chrNW_004936728:354,769...374,696 JBrowse link
G Msr1 macrophage scavenger receptor 1 susceptibility ISO ClinVar Annotator: match by term: Malignant tumor of prostate
DNA:SNPs
ClinVar
RGD
PMID:12244320 PMID:12958598 PMID:17903305 PMID:21791690 PMID:24082139 More... RGD:2306127 NCBI chrNW_004936573:5,345,282...5,391,946
Ensembl chrNW_004936573:5,328,526...5,388,901
JBrowse link
G Mtbp MDM2 binding protein ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936470:26,312,670...26,386,410
Ensembl chrNW_004936470:26,312,590...26,386,427
JBrowse link
G Mthfr methylenetetrahydrofolate reductase ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936474:623,438...637,849
Ensembl chrNW_004936474:623,291...638,193
JBrowse link
G Mtnap1 mitochondrial nucleoid associated protein 1 ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar NCBI chrNW_004936655:987,527...1,002,910
Ensembl chrNW_004936655:986,681...1,002,300
JBrowse link
G Mtor mechanistic target of rapamycin kinase treatment ISO RGD PMID:23094058 RGD:10041034 NCBI chrNW_004936474:158,376...282,310
Ensembl chrNW_004936474:157,590...282,342
JBrowse link
G Muc1 mucin 1, cell surface associated severity ISO RGD PMID:16475027 RGD:7349340 NCBI chrNW_004936580:4,691,870...4,694,092 JBrowse link
G Muc6 mucin 6, oligomeric mucus/gel-forming ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936816:882...14,717 JBrowse link
G Mxi1 MAX interactor 1, dimerization protein ISO ClinVar Annotator: match by term: Malignant tumor of prostate OMIM
ClinVar
PMID:7773287 NCBI chrNW_004936486:1,103,908...1,173,982
Ensembl chrNW_004936486:1,101,552...1,177,220
JBrowse link
G Mxra5 matrix remodeling associated 5 ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936644:2,502,334...2,528,278 JBrowse link
G Myc MYC proto-oncogene, bHLH transcription factor susceptibility
severity
ISO DNA:snp:intron:IVS1-355T>A rs3891248 (human)
protein:increased expression:prostate gland (human)
RGD PMID:18483343 PMID:20140016 RGD:7207432 RGD:7240541 NCBI chrNW_004936470:20,480,844...20,485,955
Ensembl chrNW_004936470:20,480,829...20,485,965
JBrowse link
G Mycbp2 MYC binding protein 2 disease_progression ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar
RGD
PMID:23265383 PMID:26408707 RGD:596936225 NCBI chrNW_004936511:3,977,950...4,248,959
Ensembl chrNW_004936511:3,978,246...4,249,234
JBrowse link
G Myh8 myosin heavy chain 8 ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936595:3,278,829...3,307,134
Ensembl chrNW_004936595:3,278,886...3,308,716
JBrowse link
G Mylk myosin light chain kinase ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936725:1,418,930...1,594,697
Ensembl chrNW_004936725:1,424,130...1,592,840
JBrowse link
G Myo16 myosin XVI ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936472:3,157,508...3,548,164
Ensembl chrNW_004936472:3,212,773...3,574,114
JBrowse link
G Myo18a myosin XVIIIA ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar NCBI chrNW_004936538:5,257,165...5,351,757
Ensembl chrNW_004936538:5,258,401...5,344,669
JBrowse link
G Myo1a myosin IA ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936646:1,238,630...1,258,491
Ensembl chrNW_004936646:1,238,865...1,258,040
JBrowse link
G Myo6 myosin VI ISO protein:increased expression:prostate gland epithelium, perinuclear region of cytoplasm RGD PMID:18543251 RGD:2314956 NCBI chrNW_004936788:1,125,332...1,264,372
Ensembl chrNW_004936788:1,174,544...1,262,746
JBrowse link
G Myocd myocardin ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936595:5,256,615...5,356,563
Ensembl chrNW_004936595:5,256,785...5,351,723
JBrowse link
G Myot myotilin ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936597:4,830,111...4,847,409
Ensembl chrNW_004936597:4,830,027...4,847,421
JBrowse link
G Myrf myelin regulatory factor ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936581:1,335,969...1,367,104
Ensembl chrNW_004936581:1,338,762...1,367,104
JBrowse link
G Napb NSF attachment protein beta ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936620:2,158,246...2,205,624
Ensembl chrNW_004936620:2,157,528...2,205,586
JBrowse link
G Nbn nibrin susceptibility ISO DNA:deletion, loss of heterozygosity
ClinVar Annotator: match by term: Malignant tumor of prostate | ClinVar Annotator: match by term: Prostate cancer
RGD
ClinVar
PMID:14973119 PMID:23265383 PMID:23555315 PMID:25741868 PMID:26467025 More... RGD:2298995 NCBI chrNW_004936544:3,773,828...3,812,673
Ensembl chrNW_004936544:3,775,220...3,808,837
JBrowse link
G Ncoa1 nuclear receptor coactivator 1 disease_progression ISO RGD PMID:14871982 RGD:2293530 NCBI chrNW_004936493:7,368,393...7,605,754
Ensembl chrNW_004936493:7,368,462...7,465,615
JBrowse link
G Ncoa2 nuclear receptor coactivator 2 ISO mRNA:increased expression:prostate (human) RGD PMID:20166126 RGD:5688351 NCBI chrNW_004936496:14,844,923...15,102,922
Ensembl chrNW_004936496:14,844,855...15,016,454
JBrowse link
G Ncoa3 nuclear receptor coactivator 3 ISO mRNA:increased expression:prostate (human) RGD PMID:20166126 RGD:5688351 NCBI chrNW_004936514:5,900,135...5,967,862
Ensembl chrNW_004936514:5,901,601...5,967,865
JBrowse link
G Ncoa4 nuclear receptor coactivator 4 severity ISO mRNA:decreased expression:prostate gland
protein:increased expression:prostate gland
RGD PMID:12368219 PMID:15166229 RGD:2293534 RGD:2293535 NCBI chrNW_004936728:376,915...402,539
Ensembl chrNW_004936728:376,852...402,539
JBrowse link
G Necap2 NECAP endocytosis associated 2 ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936474:3,892,608...3,906,548
Ensembl chrNW_004936474:3,892,608...3,906,558
JBrowse link
G Nek9 NIMA related kinase 9 ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936488:4,221,099...4,261,401
Ensembl chrNW_004936488:4,220,429...4,261,432
JBrowse link
G Nelfcd negative elongation factor complex member C/D disease_progression ISO RGD PMID:19945309 RGD:9693724 NCBI chrNW_004936530:1,474,097...1,481,943
Ensembl chrNW_004936530:1,474,136...1,481,567
JBrowse link
G Nell1 neural EGFL like 1 ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936654:1,591,016...2,392,496
Ensembl chrNW_004936654:1,591,847...2,394,692
JBrowse link
G Neto2 neuropilin and tolloid like 2 ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936475:450,382...508,357
Ensembl chrNW_004936475:450,382...508,357
JBrowse link
G Nfkb1 nuclear factor kappa B subunit 1 susceptibility
treatment
ISO DNA:indel:promoter
DNA:SNPs, haplotype: :multiple
RGD PMID:26068031 PMID:26788504 PMID:28797847 RGD:11054182 RGD:11554936 RGD:13506729 NCBI chrNW_004936520:733,760...850,563
Ensembl chrNW_004936520:733,668...829,435
JBrowse link
G Nfkbia NFKB inhibitor alpha no_association
disease_progression
susceptibility
ISO DNA:polymorphism:3' UTR
ClinVar Annotator: match by term: Malignant tumor of prostate
protein:increased serine phosphorylation
DNA:SNPs: :rs2233406, rs3138053 (human)
DNA:SNPs:promoter:-826C>T, -881A>G (human)
RGD
ClinVar
PMID:23093296 PMID:26068031 PMID:26834482 RGD:11054182 RGD:13506766 RGD:13506767 NCBI chrNW_004936494:9,537,793...9,541,187
Ensembl chrNW_004936494:9,537,008...9,541,612
JBrowse link
G Nhs NHS actin remodeling regulator ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:28492532 NCBI chrNW_004936470:6,632,724...6,967,878
Ensembl chrNW_004936470:6,919,623...6,971,125
JBrowse link
G Nkx3-1 NK3 homeobox 1 ISO OMIM:176807 | OMIM:300147 | OMIM:300704 | OMIM:601518 | OMIM:602759 | OMIM:608656 | OMIM:608658 | OMIM:609299 | OMIM:609558 | OMIM:610321 | OMIM:610997 | OMIM:611100 | OMIM:611868 | OMIM:611928 | OMIM:611955 | OMIM:611958 | OMIM:611959 MouseDO NCBI chrNW_004936555:7,087,677...7,091,334
Ensembl chrNW_004936555:7,088,577...7,091,334
JBrowse link
G Nlrp1 NLR family pyrin domain containing 1 ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 PMID:28492532 NCBI chrNW_004936677:2,248,153...2,290,802
Ensembl chrNW_004936677:2,248,903...2,289,151
JBrowse link
G Nmd3 NMD3 ribosome export adaptor ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936708:1,171,891...1,198,506
Ensembl chrNW_004936708:1,171,859...1,201,358
JBrowse link
G Nos3 nitric oxide synthase 3 disease_progression ISO DNA:polymorphism:exon:p.E298D (human) RGD PMID:16458450 RGD:2292076 NCBI chrNW_004936527:6,427,147...6,445,770
Ensembl chrNW_004936527:6,427,093...6,446,534
JBrowse link
G Notch3 notch receptor 3 ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:7732783 PMID:15364702 PMID:16328531 PMID:23265383 PMID:25033846 More... NCBI chrNW_004936596:5,265,984...5,301,430
Ensembl chrNW_004936596:5,265,999...5,300,429
JBrowse link
G Nr3c1 nuclear receptor subfamily 3 group C member 1 ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936504:10,960,069...11,056,834
Ensembl chrNW_004936504:10,959,192...11,056,856
JBrowse link
G Nras NRAS proto-oncogene, GTPase disease_progression ISO RGD PMID:18334737 RGD:2314837 NCBI chrNW_004936627:73,413...82,590
Ensembl chrNW_004936627:73,413...82,590
JBrowse link
G Ntn4 netrin 4 ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936507:11,771,692...11,880,271
Ensembl chrNW_004936507:11,771,692...11,880,023
JBrowse link
G Nwd1 NACHT and WD repeat domain containing 1 ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936596:3,882,259...3,948,664
Ensembl chrNW_004936596:3,884,269...3,942,406
JBrowse link
G Ogg1 8-oxoguanine DNA glycosylase susceptibility ISO DNA:missense mutation:cds:p.S326C (human)
DNA:missense mutation:exon:p.S326C (1245C>G) (rs1052133) (human)
RGD PMID:19914098 PMID:24649009 RGD:8657136 RGD:8657378 NCBI chrNW_004936602:3,411,106...3,418,826
Ensembl chrNW_004936602:3,413,282...3,418,831
JBrowse link
G Oit3 oncoprotein induced transcript 3 ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar NCBI chrNW_004936521:6,098,071...6,123,740
Ensembl chrNW_004936521:6,098,111...6,123,745
JBrowse link
G Ola1 Obg like ATPase 1 ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936509:3,901,657...4,053,964
Ensembl chrNW_004936509:3,901,511...4,052,319
JBrowse link
G Olfml3 olfactomedin like 3 ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936690:2,354,416...2,357,904
Ensembl chrNW_004936690:2,354,748...2,357,945
JBrowse link
G Oxa1l OXA1L mitochondrial inner membrane insertase ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936722:1,524,116...1,528,659 JBrowse link
G Pak4 p21 (RAC1) activated kinase 4 ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar NCBI chrNW_004936661:2,012,439...2,048,523 JBrowse link
G Palm2akap2 PALM2 and AKAP2 fusion ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936559:2,860,595...3,194,846
Ensembl chrNW_004936559:2,860,147...2,997,627
JBrowse link
G Pard3 par-3 family cell polarity regulator ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936574:2,472,064...3,013,590
Ensembl chrNW_004936574:2,473,675...3,013,582
JBrowse link
G Pcdhb1 protocadherin beta 1 ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936504:13,116,849...13,119,458
Ensembl chrNW_004936504:13,116,914...13,119,370
JBrowse link
G Pcnx1 pecanex 1 ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936488:525,340...653,192
Ensembl chrNW_004936488:530,239...650,225
JBrowse link
G Pde1c phosphodiesterase 1C ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936478:7,900,432...8,499,300
Ensembl chrNW_004936478:7,900,432...8,393,631
JBrowse link
G Pde3a phosphodiesterase 3A ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar NCBI chrNW_004936548:5,758,634...6,072,195
Ensembl chrNW_004936548:5,762,507...6,070,576
JBrowse link
G Pde6b phosphodiesterase 6B ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936477:22,418,037...22,472,251
Ensembl chrNW_004936477:22,417,453...22,472,185
JBrowse link
G Pde7b phosphodiesterase 7B ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936560:3,323,264...3,633,083
Ensembl chrNW_004936560:3,323,230...3,633,251
JBrowse link
G Pdgfrb platelet derived growth factor receptor beta ISO RGD PMID:17854058 RGD:2292228 NCBI chrNW_004936504:4,762,251...4,799,789
Ensembl chrNW_004936504:4,762,184...4,799,829
JBrowse link
G Pdk4 pyruvate dehydrogenase kinase 4 ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar NCBI chrNW_004936585:4,701,012...4,713,421
Ensembl chrNW_004936585:4,700,418...4,714,450
JBrowse link
G Pdp2 pyruvate dehyrogenase phosphatase catalytic subunit 2 ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936475:17,139,135...17,146,021
Ensembl chrNW_004936475:17,139,521...17,143,304
JBrowse link
G Pdpk1 3-phosphoinositide dependent protein kinase 1 treatment ISO RGD PMID:26294745 RGD:11534031 NCBI chrNW_004936694:1,444,819...1,487,628
Ensembl chrNW_004936694:1,444,880...1,488,265
Ensembl chrNW_004936694:1,444,880...1,488,265
JBrowse link
G Pebp1 phosphatidylethanolamine binding protein 1 ISO RGD PMID:18722266 RGD:2302865 NCBI chrNW_004936668:2,316,661...2,323,015 JBrowse link
G Pgpep1 pyroglutamyl-peptidase I ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936596:2,869,100...2,892,342
Ensembl chrNW_004936596:2,869,106...2,892,342
JBrowse link
G Phf2 PHD finger protein 2 ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936487:2,912,114...2,956,429
Ensembl chrNW_004936487:2,912,112...2,954,525
JBrowse link
G Phf8 PHD finger protein 8 ISO mRNA:increased expression:prostate (human) RGD PMID:22120715 RGD:9586733 NCBI chrNW_004936751:850,630...935,382
Ensembl chrNW_004936751:850,237...934,586
JBrowse link
G Phlpp1 PH domain and leucine rich repeat protein phosphatase 1 disease_progression ISO mRNA:decreased expression:tumor:lower in high versus low Gleason score tumors (p<0.05 compared to at least one housekeeping gene) RGD PMID:18336616 RGD:2301729 NCBI chrNW_004936497:2,467,776...2,683,794
Ensembl chrNW_004936497:2,467,684...2,683,799
JBrowse link
G Pigh phosphatidylinositol glycan anchor biosynthesis class H ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936495:10,971,448...10,979,622
Ensembl chrNW_004936495:10,969,364...10,979,620
JBrowse link
G Pik3ca phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha ISO ClinVar Annotator: match by term: Prostate cancer ClinVar PMID:15520168 PMID:25741868 NCBI chrNW_004936566:3,924,013...3,951,052
Ensembl chrNW_004936566:3,923,934...3,951,073
JBrowse link
G Pik3cb phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit beta treatment
disease_progression
ISO RGD PMID:18372911 PMID:20103642 RGD:13506809 RGD:13506810 NCBI chrNW_004936540:907,118...1,041,814
Ensembl chrNW_004936540:907,112...1,041,848
JBrowse link
G Pik3cg phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit gamma ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar NCBI chrNW_004936479:17,084,006...17,112,264
Ensembl chrNW_004936479:17,084,920...17,112,258
JBrowse link
G Pik3r1 phosphoinositide-3-kinase regulatory subunit 1 disease_progression ISO mRNA:decreased expression:tumor:lower in high versus low Gleason score tumors (p<0.05 compared to at least one housekeeping gene)
ClinVar Annotator: match by term: Malignant tumor of prostate
RGD
ClinVar
PMID:18336616 PMID:23265383 RGD:2301729 NCBI chrNW_004936480:1,188,408...1,273,210
Ensembl chrNW_004936480:1,188,183...1,273,537
JBrowse link
G Pik3r2 phosphoinositide-3-kinase regulatory subunit 2 ISO RGD PMID:26677064 RGD:11561757 NCBI chrNW_004936596:3,010,526...3,021,848
Ensembl chrNW_004936596:3,010,488...3,021,920
JBrowse link
G Pitx2 paired like homeodomain 2 ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar NCBI chrNW_004936563:1,713,294...1,732,431 JBrowse link
G Pkd2l1 polycystin 2 like 1, transient receptor potential cation channel ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004944487:205...1,593 JBrowse link
G Pkhd1 PKHD1 ciliary IPT domain containing fibrocystin/polyductin ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 PMID:28492532 NCBI chrNW_004936476:8,730,766...9,160,102
Ensembl chrNW_004936476:8,730,842...9,159,863
JBrowse link
G Plau plasminogen activator, urokinase severity ISO protein:increased expression:serum (human) RGD PMID:10024688 RGD:7241264 NCBI chrNW_004936521:5,238,128...5,243,829
Ensembl chrNW_004936521:5,238,093...5,243,877
JBrowse link
G Plb1 phospholipase B1 ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936493:4,112,632...4,210,882
Ensembl chrNW_004936493:4,112,858...4,232,492
JBrowse link
G Plcb4 phospholipase C beta 4 ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936485:9,991,731...10,353,231
Ensembl chrNW_004936485:9,991,299...10,353,123
JBrowse link
G Plekha4 pleckstrin homology domain containing A4 ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936664:2,890,279...2,908,423
Ensembl chrNW_004936664:2,890,463...2,907,871
JBrowse link
G Plekhg1 pleckstrin homology and RhoGEF domain containing G1 ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936489:3,635,960...3,840,877
Ensembl chrNW_004936489:3,760,831...3,838,926
JBrowse link
G Pmepa1 prostate transmembrane protein, androgen induced 1 disease_progression ISO RGD PMID:12907594 RGD:2315107 NCBI chrNW_004936530:429,059...439,847
Ensembl chrNW_004936530:429,045...439,866
JBrowse link
G Pms2 PMS1 homolog 2, mismatch repair system component disease_progression ISO RGD PMID:19124481 RGD:2315026 NCBI chrNW_004936750:439,396...468,747 JBrowse link
G Pnliprp1 pancreatic lipase related protein 1 ISO RGD PMID:11384102 RGD:2302990 NCBI chrNW_004936486:6,548,481...6,563,144
Ensembl chrNW_004936486:6,548,603...6,563,148
JBrowse link
G Podn podocan ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936522:7,954,541...7,995,195
Ensembl chrNW_004936522:7,973,687...7,995,301
JBrowse link
G Polk DNA polymerase kappa ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:25741868 PMID:26046662 NCBI chrNW_004936549:1,199,810...1,261,889 JBrowse link
G Poln DNA polymerase nu ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936477:21,268,236...21,396,526
Ensembl chrNW_004936477:21,268,244...21,396,256
JBrowse link
G Pon1 paraoxonase 1 ISO protein:increased activity:serum (human) RGD PMID:23768700 RGD:8547662 NCBI chrNW_004936585:4,954,871...4,979,560
Ensembl chrNW_004936585:4,954,869...4,979,591
JBrowse link
G Ppip5k2 diphosphoinositol pentakisphosphate kinase 2 ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar NCBI chrNW_004936523:1,321,755...1,418,267
Ensembl chrNW_004936523:1,331,487...1,418,290
JBrowse link
G Ppp1r3c protein phosphatase 1 regulatory subunit 3C ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936601:2,930,250...2,935,024
Ensembl chrNW_004936601:2,930,208...2,935,092
JBrowse link
G Ppp2ca protein phosphatase 2 catalytic subunit alpha ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar NCBI chrNW_004936647:1,031,118...1,055,961
Ensembl chrNW_004936647:1,031,119...1,055,149
JBrowse link
G Ppp2r5c protein phosphatase 2 regulatory subunit B'gamma ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936835:54,478...192,486
Ensembl chrNW_004936835:96,930...192,756
JBrowse link
G Ppp6r2 protein phosphatase 6 regulatory subunit 2 ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936629:394,535...462,710
Ensembl chrNW_004936629:395,419...435,453
JBrowse link
G Pprc1 PPARG related coactivator 1 ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936600:3,690,112...3,705,762 JBrowse link
G Prex1 phosphatidylinositol-3,4,5-trisphosphate dependent Rac exchange factor 1 ISO protein:increased expression:prostate, lymph node RGD PMID:19305425 RGD:2314605 NCBI chrNW_004936514:5,291,473...5,443,999
Ensembl chrNW_004936514:5,368,629...5,444,003
JBrowse link
G Prex2 phosphatidylinositol-3,4,5-trisphosphate dependent Rac exchange factor 2 ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936496:6,005,410...6,284,332
Ensembl chrNW_004936496:6,008,277...6,284,346
JBrowse link
G Prkd1 protein kinase D1 ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936494:4,469,092...4,601,183
Ensembl chrNW_004936494:4,469,089...4,601,214
JBrowse link
G Prph2 peripherin 2 ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936476:17,159,756...17,174,226
Ensembl chrNW_004936476:17,160,016...17,173,981
JBrowse link
G Prss22 serine protease 22 ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936694:1,381,624...1,385,973
Ensembl chrNW_004936694:1,381,623...1,386,042
JBrowse link
G Psmc1 proteasome 26S subunit, ATPase 1 ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936488:17,455,612...17,468,933
Ensembl chrNW_004936488:17,455,461...17,469,527
JBrowse link
G Pten phosphatase and tensin homolog disease_progression ISO mRNA:decreased expression:tumor:lower in high versus low Gleason score tumors (p<0.05 compared to at least one housekeeping gene)
ClinVar Annotator: match by term: Malignant tumor of prostate | ClinVar Annotator: match by term: Prostate cancer
DNA:deletion
RGD
ClinVar
OMIM
PMID:9259288 PMID:9399897 PMID:9467011 PMID:9856571 PMID:10232405 More... RGD:2292502 RGD:2301729 NCBI chrNW_004936735:1,252,414...1,338,318
Ensembl chrNW_004936735:1,252,414...1,338,323
JBrowse link
G Ptgs2 prostaglandin-endoperoxide synthase 2 susceptibility ISO DNA:SNP:promoter:-1195G>A (human) RGD PMID:26788504 RGD:11554936 NCBI chrNW_004936481:3,821,564...3,828,086 JBrowse link
G Ptk2 protein tyrosine kinase 2 ISO protein:increased expression:prostate gland RGD PMID:12242727 RGD:2292570 NCBI chrNW_004936470:10,379,855...10,578,531
Ensembl chrNW_004936470:10,379,872...10,578,543
JBrowse link
G Ptk2b protein tyrosine kinase 2 beta severity ISO protein:decreased expression:prostate gland RGD PMID:11204274 RGD:2292571 NCBI chrNW_004936675:216,970...325,670
Ensembl chrNW_004936675:275,288...324,810
JBrowse link
G Ptpn21 protein tyrosine phosphatase non-receptor type 21 ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936488:15,922,624...15,996,997
Ensembl chrNW_004936488:15,923,833...15,995,142
JBrowse link
G Ptpn3 protein tyrosine phosphatase non-receptor type 3 ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936559:3,436,114...3,547,316
Ensembl chrNW_004936559:3,436,651...3,547,275
JBrowse link
G Ptprd protein tyrosine phosphatase receptor type D ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936539:2,564,815...3,369,975
Ensembl chrNW_004936539:2,564,793...2,945,293
JBrowse link
G Ptprn2 protein tyrosine phosphatase receptor type N2 ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936797:55,217...151,201 JBrowse link
G Pycr3 pyrroline-5-carboxylate reductase 3 ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936470:8,527,896...8,531,788
Ensembl chrNW_004936470:8,528,103...8,531,569
JBrowse link
G Rab11fip4 RAB11 family interacting protein 4 ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936538:3,269,317...3,382,298
Ensembl chrNW_004936538:3,269,336...3,382,304
JBrowse link
G Rab33a RAB33A, member RAS oncogene family ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 PMID:28492532 NCBI chrNW_004936479:1,425,765...1,437,338
Ensembl chrNW_004936479:1,425,722...1,437,374
JBrowse link
G Rac2 Rac family small GTPase 2 ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936492:3,726,375...3,737,961
Ensembl chrNW_004936492:3,726,313...3,736,905
JBrowse link
G Rad50 RAD50 double strand break repair protein ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:26467025 PMID:28492532 PMID:33339169 NCBI chrNW_004936647:2,546,100...2,637,524
Ensembl chrNW_004936647:2,543,599...2,637,846
JBrowse link
G Raf1 Raf-1 proto-oncogene, serine/threonine kinase disease_progression ISO RGD PMID:15666389 RGD:13506811 NCBI chrNW_004936602:1,089,979...1,114,376
Ensembl chrNW_004936602:1,051,205...1,117,096
JBrowse link
G Rapgefl1 Rap guanine nucleotide exchange factor like 1 ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar NCBI chrNW_004936490:15,281,462...15,295,479
Ensembl chrNW_004936490:15,281,433...15,296,636
JBrowse link
G Raph1 Ras association (RalGDS/AF-6) and pleckstrin homology domains 1 ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936631:100,072...196,557
Ensembl chrNW_004936631:108,310...196,563
JBrowse link
G Rasal2 RAS protein activator like 2 ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936481:10,358,673...10,688,535
Ensembl chrNW_004936481:10,365,303...10,688,578
JBrowse link
G Rassf1 Ras association domain family member 1 disease_progression ISO DNA:hypermethylation:promoter RGD PMID:17960617 RGD:2299865 NCBI chrNW_004936529:1,857,177...1,866,198
Ensembl chrNW_004936529:1,857,145...1,867,260
JBrowse link
G Rb1 RB transcriptional corepressor 1 ISO DNA:loss of heterozygosity RGD PMID:18383208 RGD:2299887 NCBI chrNW_004936565:1,596,227...1,746,706
Ensembl chrNW_004936565:1,597,593...1,746,846
JBrowse link
G Rbak RB associated KRAB zinc finger ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936765:312,474...327,089
Ensembl chrNW_004936765:315,255...326,409
JBrowse link
G Rcc2 regulator of chromosome condensation 2 ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar NCBI chrNW_004936474:4,265,572...4,307,283
Ensembl chrNW_004936474:4,265,578...4,281,364
JBrowse link
G Rergl RERG like ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936548:8,049,789...8,058,472
Ensembl chrNW_004936548:8,049,789...8,058,472
JBrowse link
G Rhobtb2 Rho related BTB domain containing 2 ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936555:6,664,811...6,684,756
Ensembl chrNW_004936555:6,664,768...6,682,822
JBrowse link
G Ripor3 RIPOR family member 3 ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936514:4,029,925...4,064,434
Ensembl chrNW_004936514:4,034,546...4,063,467
JBrowse link
G Rlim ring finger protein, LIM domain interacting ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936683:930,537...961,792
Ensembl chrNW_004936683:934,338...961,863
JBrowse link
G Rnasel ribonuclease L ISO ClinVar Annotator: match by term: Prostate cancer ClinVar PMID:11799394 PMID:25741868 PMID:28492532 NCBI chrNW_004936481:7,165,400...7,177,342
Ensembl chrNW_004936481:7,165,353...7,177,538
JBrowse link
G Rpl10l ribosomal protein L10 like ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936583:2,975,604...2,976,248
Ensembl chrNW_004936583:2,975,604...2,976,248
JBrowse link
G Rps6kc1 ribosomal protein S6 kinase C1 ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936557:361,071...578,298
Ensembl chrNW_004936557:358,221...578,453
JBrowse link
G Rpusd1 RNA pseudouridine synthase domain containing 1 ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936501:241,190...244,180
Ensembl chrNW_004936501:241,232...244,366
JBrowse link
G Rtel1 regulator of telomere elongation helicase 1 susceptibility ISO DNA:SNP:cds:rs2297441|rs3208008 (human) RGD PMID:31762827 RGD:152995257 NCBI chrNW_004936514:10,920,979...10,954,483
Ensembl chrNW_004936514:10,922,322...10,954,402
JBrowse link
G Rubcnl rubicon like autophagy enhancer ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936857:839,418...870,961 JBrowse link
G Rundc1 RUN domain containing 1 ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar NCBI chrNW_004936490:17,680,077...17,690,864
Ensembl chrNW_004936490:17,680,073...17,690,870
JBrowse link
G S100a3 S100 calcium binding protein A3 ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936580:3,359,247...3,360,226
Ensembl chrNW_004936580:3,359,188...3,360,594
JBrowse link
G Safb2 scaffold attachment factor B2 ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936588:3,190,629...3,223,124 JBrowse link
G Sbno1 strawberry notch homolog 1 ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936558:1,383,652...1,442,298
Ensembl chrNW_004936558:1,393,799...1,442,298
JBrowse link
G Scnn1a sodium channel epithelial 1 subunit alpha ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936709:1,377,852...1,403,398
Ensembl chrNW_004936709:1,377,831...1,403,833
JBrowse link
G Scrn1 secernin 1 ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936478:6,222,498...6,281,162
Ensembl chrNW_004936478:6,222,018...6,280,622
JBrowse link
G Scube3 signal peptide, CUB domain and EGF like domain containing 3 ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936476:23,962,956...23,987,629
Ensembl chrNW_004936476:23,966,847...23,998,663
JBrowse link
G Sdk1 sidekick cell adhesion molecule 1 ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936765:1,429,422...1,667,441
Ensembl chrNW_004936765:1,429,398...1,778,148
JBrowse link
G Setd5 SET domain containing 5 severity ISO RGD PMID:30616239 RGD:155804256 NCBI chrNW_004936602:3,577,543...3,654,179
Ensembl chrNW_004936602:3,577,525...3,654,269
JBrowse link
G Setdb1 SET domain bifurcated histone lysine methyltransferase 1 ISO mRNA, protein:increased expression:prostate gland (human) RGD PMID:24556744 RGD:9590161 NCBI chrNW_004936580:1,146,286...1,192,842
Ensembl chrNW_004936580:1,146,277...1,192,842
JBrowse link
G Sez6l seizure related 6 homolog like ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936657:956,340...1,014,558
Ensembl chrNW_004936657:963,402...1,014,099
JBrowse link
G Sf3b3 splicing factor 3b subunit 3 ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936475:23,038,424...23,086,134
Ensembl chrNW_004936475:23,037,687...23,086,188
JBrowse link
G Sgk3 serum/glucocorticoid regulated kinase family member 3 ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936496:7,196,936...7,287,367
Ensembl chrNW_004936496:7,195,777...7,265,186
JBrowse link
G Sgsm2 small G protein signaling modulator 2 ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar NCBI chrNW_004936538:8,395,902...8,436,616
Ensembl chrNW_004936538:8,395,915...8,436,655
JBrowse link
G Shcbp1l SHC binding and spindle associated 1 like ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936481:6,854,480...6,889,584
Ensembl chrNW_004936481:6,855,169...6,889,708
JBrowse link
G Si sucrase-isomaltase ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936707:1,153,538...1,228,220
Ensembl chrNW_004936707:1,153,538...1,228,220
JBrowse link
G Sirt1 sirtuin 1 disease_progression ISO RGD PMID:23038275 RGD:9585760 NCBI chrNW_004936521:10,296,097...10,316,673
Ensembl chrNW_004936521:10,296,097...10,322,215
JBrowse link
G Skic3 SKI3 subunit of superkiller complex ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936523:7,786,629...7,885,220
Ensembl chrNW_004936523:7,786,649...7,888,341
JBrowse link
G Skil SKI like proto-oncogene ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936593:2,109,414...2,132,871
Ensembl chrNW_004936593:2,109,223...2,132,882
JBrowse link
G Skp2 S-phase kinase associated protein 2 disease_progression ISO RGD PMID:19450994 RGD:2315029 NCBI chrNW_004936518:5,635,856...5,664,057
Ensembl chrNW_004936518:5,637,331...5,664,778
JBrowse link
G Slc13a3 solute carrier family 13 member 3 ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 PMID:25741868 PMID:28492532 NCBI chrNW_004936514:6,554,605...6,594,014
Ensembl chrNW_004936514:6,554,608...6,592,671
JBrowse link
G Slc16a2 solute carrier family 16 member 2 ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936683:803,186...910,143
Ensembl chrNW_004936683:803,134...910,284
JBrowse link
G Slc25a22 solute carrier family 25 member 22 ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936888:558,064...565,576
Ensembl chrNW_004936888:558,045...565,782
JBrowse link
G Slc25a32 solute carrier family 25 member 32 ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:28492532 NCBI chrNW_004936470:40,357,066...40,370,514
Ensembl chrNW_004936470:40,357,446...40,370,514
JBrowse link
G Slc25a47 solute carrier family 25 member 47 ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936604:3,976,677...3,981,572
Ensembl chrNW_004936604:3,978,061...3,980,958
JBrowse link
G Slc2a4rg SLC2A4 regulator ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936514:10,984,174...10,987,574
Ensembl chrNW_004936514:10,984,171...10,987,127
JBrowse link
G Slc30a2 solute carrier family 30 member 2 ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar NCBI chrNW_004936474:10,581,504...10,589,364
Ensembl chrNW_004936474:10,581,480...10,589,442
JBrowse link
G Slc34a1 solute carrier family 34 member 1 ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936597:1,667,700...1,684,533
Ensembl chrNW_004936597:1,667,569...1,684,539
JBrowse link
G Slc35c1 solute carrier family 35 member C1 ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936562:3,190,955...3,198,858
Ensembl chrNW_004936562:3,190,962...3,198,884
JBrowse link
G Slc35g1 solute carrier family 35 member G1 ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936601:1,171,542...1,181,699
Ensembl chrNW_004936601:1,170,777...1,181,960
JBrowse link
G Slc46a3 solute carrier family 46 member 3 ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936472:23,779,294...23,800,088
Ensembl chrNW_004936472:23,778,967...23,800,738
JBrowse link
G Slc5a2 solute carrier family 5 member 2 ISO ClinVar Annotator: match by term: Prostate cancer ClinVar PMID:23265383 PMID:25741868 NCBI chrNW_004936543:8,336,884...8,343,322
Ensembl chrNW_004936543:8,336,873...8,343,322
JBrowse link
G Slc5a7 solute carrier family 5 member 7 ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936729:1,511,648...1,534,042
Ensembl chrNW_004936729:1,511,836...1,536,200
JBrowse link
G Slc6a9 solute carrier family 6 member 9 ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 PMID:28492532 NCBI chrNW_004936474:25,312,544...25,344,993
Ensembl chrNW_004936474:25,313,201...25,345,053
JBrowse link
G Slc8a3 solute carrier family 8 member A3 ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936495:13,236,480...13,370,973
Ensembl chrNW_004936495:13,236,470...13,371,011
JBrowse link
G Slco1b3 solute carrier organic anion transporter family member 1B3 disease_progression ISO mRNA,protein:increased expression:prostate (human) RGD PMID:21625523 RGD:152995425 NCBI chrNW_004936548:5,593,908...5,682,187 JBrowse link
G Smad3 SMAD family member 3 disease_progression ISO protein:increased expression:tumor:significantly elevated in 53/67 (79%, p=0.0002) overall, in 23/35 with Gleason score 6-7(66%) and 30/32 with Gleason score 8-10 (94%, p=0.0062); by immunohistochemistry RGD PMID:17908958 RGD:2300396 NCBI chrNW_004936471:27,080,662...27,185,861
Ensembl chrNW_004936471:27,080,575...27,189,793
JBrowse link
G Smad9 SMAD family member 9 ISO protein:altered localization RGD PMID:15042598 RGD:2299981 NCBI chrNW_004936472:30,980,850...31,050,138
Ensembl chrNW_004936472:30,980,928...31,049,618
JBrowse link
G Smarca2 SWI/SNF related BAF chromatin remodeling complex subunit ATPase 2 disease_progression ISO RGD PMID:17075831 RGD:2302527 NCBI chrNW_004936503:2,835,512...3,001,365
Ensembl chrNW_004936503:2,835,496...3,001,381
JBrowse link
G Smarca4 SWI/SNF related BAF chromatin remodeling complex subunit ATPase 4 no_association
disease_progression
ISO absence of somatic mutations in the samples used RGD PMID:12684665 PMID:17075831 RGD:2302527 RGD:2302528 NCBI chrNW_004936659:1,152,846...1,246,718
Ensembl chrNW_004936659:1,169,792...1,249,213
JBrowse link
G Smarcc2 SWI/SNF related BAF chromatin remodeling complex subunit C2 ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar NCBI chrNW_004936646:571,745...594,365
Ensembl chrNW_004936646:572,340...592,766
JBrowse link
G Smug1 single-strand-selective monofunctional uracil-DNA glycosylase 1 ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936512:11,395,513...11,416,426
Ensembl chrNW_004936512:11,395,834...11,402,377
JBrowse link
G Snrpe small nuclear ribonucleoprotein polypeptide E severity ISO mRNA:increased expression:prostate gland (human) RGD PMID:22740892 RGD:10768830 NCBI chrNW_004936567:849,300...855,214
Ensembl chrNW_004936567:849,397...855,187
JBrowse link
G Socs1 suppressor of cytokine signaling 1 ISO DNA:hypermethylation RGD PMID:16458425 RGD:2290486 NCBI chrNW_004936530:9,312,965...9,315,593
Ensembl chrNW_004936530:9,312,965...9,316,165
JBrowse link
G Sorbs1 sorbin and SH3 domain containing 1 ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936636:3,834,887...4,066,293
Ensembl chrNW_004936636:3,948,733...4,066,293
JBrowse link
G Sorcs1 sortilin related VPS10 domain containing receptor 1 ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936776:27,519...240,225
Ensembl chrNW_004936776:28,537...241,135
JBrowse link
G Sos1 SOS Ras/Rac guanine nucleotide exchange factor 1 ISO RGD PMID:19724911 RGD:13506813 NCBI chrNW_004936508:12,162,553...12,281,812
Ensembl chrNW_004936508:12,162,547...12,281,820
JBrowse link
G Sox9 SRY-box transcription factor 9 ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936655:1,849,044...1,852,648
Ensembl chrNW_004936655:1,847,272...1,852,705
JBrowse link
G Spata18 spermatogenesis associated 18 ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936482:15,178,667...15,262,897 JBrowse link
G Specc1l sperm antigen with calponin homology and coiled-coil domains 1 like ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936619:448,304...592,981
Ensembl chrNW_004936619:448,303...593,001
JBrowse link
G Spink1 serine peptidase inhibitor Kazal type 1 severity ISO protein:increased expression:prostate gland, serum RGD PMID:17306443 RGD:2300382 NCBI chrNW_004936504:6,975,044...6,981,304
Ensembl chrNW_004936504:6,975,044...6,981,304
JBrowse link
G Spop speckle type BTB/POZ protein ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 PMID:25741868 NCBI chrNW_004936490:11,894,449...11,969,730
Ensembl chrNW_004936490:11,894,406...11,970,155
JBrowse link
G Src SRC proto-oncogene, non-receptor tyrosine kinase disease_progression ISO protein:increased tyrosine phosphorylation:prostate gland, membrane RGD PMID:19447874 RGD:2315077 NCBI chrNW_004936561:3,826,802...3,844,406
Ensembl chrNW_004936561:3,825,787...3,844,483
JBrowse link
G Srd5a1 steroid 5 alpha-reductase 1 disease_progression ISO protein:increased expression:prostate gland RGD PMID:16818707 PMID:17720776 RGD:2302521 RGD:2302523 NCBI chrNW_004936634:758,231...798,809 JBrowse link
G Srd5a2 steroid 5 alpha-reductase 2 susceptibility ISO DNA:missense mutation:cds:p.A49T (human)
mRNA:decreased expression:prostate gland
RGD PMID:10501358 PMID:12949937 RGD:2302560 RGD:4891929 NCBI chrNW_004936493:1,663,999...1,708,530
Ensembl chrNW_004936493:1,663,911...1,708,502
JBrowse link
G Srebf2 sterol regulatory element binding transcription factor 2 disease_progression ISO RGD PMID:15026365 RGD:1581413 NCBI chrNW_004936492:115,923...174,614
Ensembl chrNW_004936492:115,821...174,775
JBrowse link
G Ssbp2 single stranded DNA binding protein 2 ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936469:713,077...1,046,187
Ensembl chrNW_004936469:713,649...1,046,329
JBrowse link
G St8sia6 ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 6 ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936520:9,869,166...9,990,205
Ensembl chrNW_004936520:9,869,195...9,988,541
JBrowse link
G Stat3 signal transducer and activator of transcription 3 treatment ISO RGD PMID:15374974 RGD:8694291 NCBI chrNW_004936490:17,119,189...17,178,402
Ensembl chrNW_004936490:17,117,290...17,178,402
JBrowse link
G Stat6 signal transducer and activator of transcription 6 disease_progression ISO mRNA, protein:increased expression:fibromuscular stroma, malignant epithelia:correlated with high histological grade and increased tumor size RGD PMID:17705178 RGD:2298559 NCBI chrNW_004936646:1,297,530...1,312,508
Ensembl chrNW_004936646:1,296,290...1,312,157
JBrowse link
G Stx8 syntaxin 8 ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936595:2,328,763...2,578,788
Ensembl chrNW_004936595:2,328,740...2,578,791
JBrowse link
G Stxbp1 syntaxin binding protein 1 ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936487:15,300,758...15,367,475
Ensembl chrNW_004936487:15,300,952...15,365,713
JBrowse link
G Sufu SUFU negative regulator of hedgehog signaling ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 PMID:28492532 NCBI chrNW_004936600:3,270,662...3,381,722
Ensembl chrNW_004936600:3,268,260...3,381,781
JBrowse link
G Sv2b synaptic vesicle glycoprotein 2B ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936483:11,377,375...11,450,830
Ensembl chrNW_004936483:11,377,442...11,450,830
JBrowse link
G Sycp2 synaptonemal complex protein 2 ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936514:8,264,628...8,331,577 JBrowse link
G Syngr1 synaptogyrin 1 ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936492:2,253,703...2,262,040
Ensembl chrNW_004936492:2,253,705...2,262,151
JBrowse link
G Taok3 TAO kinase 3 ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar NCBI chrNW_004936668:2,116,804...2,305,331
Ensembl chrNW_004936668:2,222,866...2,304,151
JBrowse link
G Tcf3 transcription factor 3 severity ISO RGD PMID:22564737 RGD:13506819 NCBI chrNW_004936588:884,817...913,052
Ensembl chrNW_004936588:884,789...912,753
JBrowse link
G Tcf7 transcription factor 7 severity ISO RGD PMID:28220803 RGD:13506820 NCBI chrNW_004936647:1,096,726...1,125,753
Ensembl chrNW_004936647:1,097,019...1,125,729
JBrowse link
G Tcf7l2 transcription factor 7 like 2 disease_progression ISO DNA:SNPs: :rs7094463, rs10749127, rs11196224 (human)
DNA:SNP: :rs7903146 (human)
RGD PMID:24961829 PMID:25678841 RGD:13506821 RGD:13506825 NCBI chrNW_004936486:3,473,877...3,660,565
Ensembl chrNW_004936486:3,473,843...3,660,576
JBrowse link
G Tert telomerase reverse transcriptase ISO mRNA:increased expression:plasma RGD PMID:17108213 RGD:2291990 NCBI chrNW_004936815:468,987...492,666
Ensembl chrNW_004936815:469,020...491,697
JBrowse link
G Tex14 testis expressed 14, intercellular bridge forming factor ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936490:4,499,825...4,576,952 JBrowse link
G Tfrc transferrin receptor ISO protein:increased expression:serum RGD PMID:15514585 RGD:2292017 NCBI chrNW_004936784:696,738...728,385
Ensembl chrNW_004936784:696,713...728,543
JBrowse link
G Tg thyroglobulin ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936470:16,185,557...16,396,172 JBrowse link
G Tgfb1 transforming growth factor beta 1 ISO protein:increased expression:prostate gland RGD PMID:1289674 RGD:7394822 NCBI chrNW_004936661:3,742,080...3,758,266
Ensembl chrNW_004936661:3,742,066...3,758,272
JBrowse link
G Tgfbr2 transforming growth factor beta receptor 2 ISO OMIM:176807 | OMIM:300147 | OMIM:300704 | OMIM:601518 | OMIM:602759 | OMIM:608656 | OMIM:608658 | OMIM:609299 | OMIM:609558 | OMIM:610321 | OMIM:610997 | OMIM:611100 | OMIM:611868 | OMIM:611928 | OMIM:611955 | OMIM:611958 | OMIM:611959 MouseDO NCBI chrNW_004936473:21,324,669...21,409,430
Ensembl chrNW_004936473:21,324,658...21,409,430
JBrowse link
G Tgfbr3 transforming growth factor beta receptor 3 ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936537:7,154,125...7,340,218
Ensembl chrNW_004936537:7,175,516...7,336,895
JBrowse link
G Thbs1 thrombospondin 1 ISO mRNA:decreased expression:prostate gland RGD PMID:16076702 RGD:2317961 NCBI chrNW_004936471:3,064,466...3,081,125
Ensembl chrNW_004936471:3,064,422...3,081,949
JBrowse link
G Thbs3 thrombospondin 3 ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936580:4,699,255...4,709,200
Ensembl chrNW_004936580:4,698,623...4,709,200
JBrowse link
G Thrb thyroid hormone receptor beta ISO DNA:loss of heterozygosity (human) RGD PMID:18336598 RGD:2315095 NCBI chrNW_004936473:15,766,214...15,986,389
Ensembl chrNW_004936473:15,770,146...15,986,561
JBrowse link
G Timp2 TIMP metallopeptidase inhibitor 2 disease_progression ISO DNA, protein:hypermethylation, decreased expression:promoter, prostate gland
protein:increased expression:prostate gland
RGD PMID:17325663 PMID:18329693 RGD:2290389 RGD:2290397 NCBI chrNW_004936594:3,232,433...3,244,241
Ensembl chrNW_004936594:3,232,355...3,244,241
JBrowse link
G Timp3 TIMP metallopeptidase inhibitor 3 disease_progression ISO mRNA:decreased expression:prostate gland RGD PMID:15928670 RGD:2290417 NCBI chrNW_004936492:6,996,627...7,046,137
Ensembl chrNW_004936492:6,996,613...7,046,190
JBrowse link
G Tle5 TLE family member 5, transcriptional modulator ISO associated with metastasis;protein:decreased expression:prostate RGD PMID:28178391 RGD:597830035 NCBI chrNW_004936588:1,746,300...1,753,727
Ensembl chrNW_004936588:1,746,843...1,752,275
JBrowse link
G Tlr2 toll like receptor 2 susceptibility ISO DNA:deletion:promoter:−196_−174del (human) RGD PMID:22311043 RGD:7207899 NCBI chrNW_004936576:522,234...531,660
Ensembl chrNW_004936576:527,434...529,788
JBrowse link
G Tmco5a transmembrane and coiled-coil domains 5A ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936471:1,702,243...1,715,822
Ensembl chrNW_004936471:1,702,243...1,715,822
JBrowse link
G Tmeff2 transmembrane protein with EGF like and two follistatin like domains 2 disease_progression ISO DNA:hypermethylation RGD PMID:15299075 PMID:16458425 PMID:16500022 RGD:2290485 RGD:2290486 RGD:2290490 NCBI chrNW_004936506:6,113,521...6,375,986
Ensembl chrNW_004936506:6,114,108...6,355,200
JBrowse link
G Tmem183a transmembrane protein 183A ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936567:1,566,773...1,578,420
Ensembl chrNW_004936567:1,568,098...1,578,392
JBrowse link
G Tmem230 transmembrane protein 230 ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936485:13,772,093...13,779,201
Ensembl chrNW_004936485:13,772,106...13,779,201
JBrowse link
G Tmem94 transmembrane protein 94 ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936594:695,180...729,723
Ensembl chrNW_004936594:695,175...730,999
JBrowse link
G Tnf tumor necrosis factor ISO RGD PMID:19851870 RGD:2315114 NCBI chrNW_004936727:1,936,066...1,937,766
Ensembl chrNW_004936727:1,936,066...1,937,766
JBrowse link
G Tnfrsf8 TNF receptor superfamily member 8 ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936474:814,510...889,851 JBrowse link
G Top2a DNA topoisomerase II alpha ISO RGD PMID:18347174 RGD:2315130 NCBI chrNW_004936490:15,441,463...15,465,692
Ensembl chrNW_004936490:15,441,575...15,466,978
JBrowse link
G Topors TOP1 binding arginine/serine rich protein, E3 ubiquitin ligase ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936524:1,219,101...1,229,937
Ensembl chrNW_004936524:1,219,907...1,229,723
JBrowse link
G Tp53 tumor protein p53 disease_progression ISO DNA:mutations:exon
ClinVar Annotator: match by term: Malignant tumor of prostate | ClinVar Annotator: match by term: Prostate cancer
RGD
ClinVar
PMID:1467311 PMID:1565144 PMID:2750177 PMID:7887414 PMID:7969167 More... RGD:2290535 NCBI chrNW_004936595:919,807...935,367
Ensembl chrNW_004936595:919,428...925,425
JBrowse link
G Tp63 tumor protein p63 ISO ClinVar Annotator: match by term: Prostate cancer ClinVar PMID:23265383 PMID:28492532 NCBI chrNW_004936578:492,267...705,282
Ensembl chrNW_004936578:491,507...705,729
JBrowse link
G Tp73 tumor protein p73 ISO mRNA:alternative forms RGD PMID:15492805 RGD:2298529 NCBI chrNW_004936737:171,894...211,464
Ensembl chrNW_004936737:172,467...211,464
JBrowse link
G Trim28 tripartite motif containing 28 ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004937062:126,832...132,938
Ensembl chrNW_004937062:126,708...134,366
JBrowse link
G Triml1 tripartite motif family like 1 ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936554:1,627,624...1,633,479
Ensembl chrNW_004936554:1,627,624...1,633,479
JBrowse link
G Trip12 thyroid hormone receptor interactor 12 ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936525:6,539,234...6,690,457
Ensembl chrNW_004936525:6,539,191...6,690,457
JBrowse link
G Trpc1 transient receptor potential cation channel subfamily C member 1 ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936540:4,340,672...4,417,655
Ensembl chrNW_004936540:4,323,528...4,418,685
JBrowse link
G Trpc4 transient receptor potential cation channel subfamily C member 4 ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936472:31,710,873...31,909,106
Ensembl chrNW_004936472:31,711,040...31,843,876
JBrowse link
G Trpm3 transient receptor potential cation channel subfamily M member 3 ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936503:6,688,476...7,188,417
Ensembl chrNW_004936503:6,690,043...7,497,963
JBrowse link
G Trrap transformation/transcription domain associated protein ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936750:1,245,926...1,360,226
Ensembl chrNW_004936750:1,248,320...1,359,473
JBrowse link
G Tsg101 tumor susceptibility 101 ISO mRNA:alternative forms:cds:multiple RGD PMID:9444960 RGD:2291856 NCBI chrNW_004936590:61,352...62,037 JBrowse link
G Tshz3 teashirt zinc finger homeobox 3 ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936570:4,250,988...4,255,789
Ensembl chrNW_004936570:4,195,428...4,255,868
JBrowse link
G Tsnaxip1 translin associated factor X interacting protein 1 ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936475:18,192,765...18,198,494
Ensembl chrNW_004936475:18,192,796...18,198,470
JBrowse link
G Tspan5 tetraspanin 5 ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936717:49,797...217,567
Ensembl chrNW_004936717:49,752...217,654
JBrowse link
G Tubb3 tubulin beta 3 class III ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar NCBI chrNW_004936641:184,736...193,835
Ensembl chrNW_004936641:184,765...193,819
JBrowse link
G Ulk2 unc-51 like autophagy activating kinase 2 ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936821:1,051,247...1,162,500
Ensembl chrNW_004936821:1,051,053...1,162,735
JBrowse link
G Umodl1 uromodulin like 1 ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar NCBI chrNW_004936500:1,732,481...1,785,711
Ensembl chrNW_004936500:1,732,481...1,785,720
JBrowse link
G Unc79 unc-79 homolog, NALCN channel complex subunit ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar NCBI chrNW_004936733:1,387,951...1,657,176
Ensembl chrNW_004936733:1,388,163...1,656,184
JBrowse link
G Urb2 URB2 ribosome biogenesis homolog ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936484:20,098,210...20,118,808
Ensembl chrNW_004936484:20,098,208...20,118,823
JBrowse link
G Usf2 upstream transcription factor 2, c-fos interacting ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936570:1,012,696...1,024,243
Ensembl chrNW_004936570:1,012,654...1,024,288
JBrowse link
G Ush2a usherin ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936628:2,123,917...2,859,958
Ensembl chrNW_004936628:2,123,957...2,858,872
JBrowse link
G Usp28 ubiquitin specific peptidase 28 ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar NCBI chrNW_004936612:742,777...804,919
Ensembl chrNW_004936612:742,725...804,921
JBrowse link
G Usp48 ubiquitin specific peptidase 48 ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936474:7,307,475...7,376,086
Ensembl chrNW_004936474:7,307,439...7,376,074
JBrowse link
G Uvrag UV radiation resistance associated ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar NCBI chrNW_004936498:4,555,325...4,869,099
Ensembl chrNW_004936498:4,555,276...4,870,896
JBrowse link
G Vcan versican ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 PMID:28492532 NCBI chrNW_004936469:2,585,142...2,688,029
Ensembl chrNW_004936469:2,585,134...2,688,029
JBrowse link
G Vdac1 voltage dependent anion channel 1 ISO DNA:SNP: :rs7250897 (human) RGD PMID:28977864 RGD:13504673 NCBI chrNW_004936647:1,220,075...1,249,579
Ensembl chrNW_004936647:1,230,450...1,249,814
JBrowse link
G Vdr vitamin D receptor susceptibility ISO DNA:SNP: :rs11574143 (human) RGD PMID:19255064 RGD:4889833 NCBI chrNW_004936512:5,741,836...5,800,999
Ensembl chrNW_004936512:5,740,748...5,801,109
JBrowse link
G Vegfa vascular endothelial growth factor A ISO RGD PMID:19576799 RGD:2315459 NCBI chrNW_004936476:16,245,134...16,261,180
Ensembl chrNW_004936476:16,247,100...16,260,673
JBrowse link
G Vkorc1l1 vitamin K epoxide reductase complex subunit 1 like 1 ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936543:7,733,420...7,775,691
Ensembl chrNW_004936543:7,733,367...7,759,582
JBrowse link
G Wdr49 WD repeat domain 49 ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936593:4,717,043...4,851,710 JBrowse link
G Wif1 WNT inhibitory factor 1 ISO mRNA, protein:decreased expression:prostate gland RGD PMID:14517837 RGD:727214 NCBI chrNW_004936545:3,263,646...3,334,163
Ensembl chrNW_004936545:3,263,623...3,333,937
JBrowse link
G Wnt2 Wnt family member 2 ISO mRNA:decreased expression:prostate gland RGD PMID:14517837 RGD:727214 NCBI chrNW_004936589:1,825,209...1,866,898
Ensembl chrNW_004936589:1,825,209...1,866,889
JBrowse link
G Wwc3 WWC family member 3 ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar NCBI chrNW_004936470:19,357...127,591
Ensembl chrNW_004936470:19,351...130,180
JBrowse link
G Xiap X-linked inhibitor of apoptosis disease_progression ISO protein:increased expression:prostate gland RGD PMID:17947468 PMID:19415464 RGD:2315849 RGD:2315852 NCBI chrNW_004936479:6,677,533...6,724,800
Ensembl chrNW_004936479:6,677,526...6,722,116
JBrowse link
G Xrcc1 X-ray repair cross complementing 1 susceptibility ISO DNA:polymorphism: :p.R399Q RGD PMID:17491266 RGD:2302571 NCBI chrNW_004936706:752,571...783,746
Ensembl chrNW_004936706:751,108...783,777
JBrowse link
G Ythdc2 YTH N6-methyladenosine RNA binding protein C2 ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936597:5,406,866...5,481,155
Ensembl chrNW_004936597:5,399,911...5,479,525
JBrowse link
G Zdhhc8 zDHHC palmitoyltransferase 8 ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936619:4,032,665...4,048,079
Ensembl chrNW_004936619:4,032,659...4,048,155
JBrowse link
G Zfhx3 zinc finger homeobox 3 susceptibility ISO DNA, mRNA:mutations, decreased expression: :multiple, prostate gland (human)
DNA:deletion (human)
OMIM
RGD
PMID:15750593 PMID:16637072 RGD:2315694 RGD:2315695 NCBI chrNW_004936475:21,005,242...21,235,992
Ensembl chrNW_004936475:21,080,302...21,231,544
JBrowse link
G Zkscan1 zinc finger with KRAB and SCAN domains 1 ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936543:150,845...192,197
Ensembl chrNW_004936543:150,850...165,282
Ensembl chrNW_004936543:150,850...165,282
JBrowse link
G Zmat3 zinc finger matrin-type 3 ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936566:4,066,683...4,102,643
Ensembl chrNW_004936566:4,070,693...4,095,868
JBrowse link
G Znf184 zinc finger protein 184 ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936671:2,962,704...2,984,773 JBrowse link
G Znf287 zinc finger protein 287 ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936821:93,014...111,271
Ensembl chrNW_004936821:94,524...109,341
JBrowse link
G Znf304 zinc finger protein 304 ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936897:244,051...253,580
Ensembl chrNW_004936897:243,884...254,033
JBrowse link
G Znf48 zinc finger protein 48 ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936501:12,859,609...12,863,791
Ensembl chrNW_004936501:12,859,585...12,864,064
JBrowse link
G Znf772 zinc finger protein 772 ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936897:281,560...287,088 JBrowse link
G Zp4 zona pellucida glycoprotein 4 ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936484:15,370,443...15,376,564 JBrowse link
G Zscan2 zinc finger and SCAN domain containing 2 ISO ClinVar Annotator: match by term: Malignant tumor of prostate ClinVar PMID:23265383 NCBI chrNW_004936483:16,648,784...16,676,907
Ensembl chrNW_004936483:16,650,440...16,676,197
JBrowse link
castration-resistant prostate carcinoma term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ar androgen receptor ISO CTD Direct Evidence: marker/mechanism CTD PMID:18985049 PMID:24740322 PMID:28500234 PMID:28757136 NCBI chrNW_004936635:485,903...647,820
Ensembl chrNW_004936635:485,903...647,932
JBrowse link
G Asf1b anti-silencing function 1B histone chaperone ISO CTD Direct Evidence: marker/mechanism CTD PMID:29581250 NCBI chrNW_004936659:2,772,310...2,782,687
Ensembl chrNW_004936659:2,770,900...2,782,748
JBrowse link
G Ccne2 cyclin E2 treatment ISO RGD PMID:27431942 RGD:13504681 NCBI chrNW_004936544:7,839,730...7,852,251
Ensembl chrNW_004936544:7,839,113...7,851,335
JBrowse link
G Cd46 CD46 molecule ISO CTD Direct Evidence: marker/mechanism CTD PMID:30185663 NCBI chrNW_004936557:5,136,784...5,175,543 JBrowse link
G Cenpk centromere protein K ISO CTD Direct Evidence: marker/mechanism CTD PMID:29581250 NCBI chrNW_004936480:3,621,758...3,645,968
Ensembl chrNW_004936480:3,624,143...3,645,884
JBrowse link
G Chd1 chromodomain helicase DNA binding protein 1 ISO DNA:mutations: : RGD PMID:22722839 RGD:9587749 NCBI chrNW_004936523:4,945,650...5,016,209
Ensembl chrNW_004936523:4,945,650...5,018,145
JBrowse link
G Kdm1a lysine demethylase 1A ISO CTD Direct Evidence: marker/mechanism CTD PMID:29581250 NCBI chrNW_004936474:8,262,913...8,319,089
Ensembl chrNW_004936474:8,262,885...8,319,092
JBrowse link
G Nuf2 NUF2 component of NDC80 kinetochore complex treatment ISO RGD PMID:28498618 RGD:28867238 NCBI chrNW_004936481:21,342,667...21,371,311
Ensembl chrNW_004936481:21,342,786...21,371,328
JBrowse link
G Trim24 tripartite motif containing 24 ISO CTD Direct Evidence: marker/mechanism CTD PMID:27238081 NCBI chrNW_004936592:2,902,805...2,962,602
Ensembl chrNW_004936592:2,863,743...2,963,977
JBrowse link
G Znf217 zinc finger protein 217 ISO CTD Direct Evidence: marker/mechanism CTD PMID:29581250 NCBI chrNW_004936514:1,881,034...1,894,466
Ensembl chrNW_004936514:1,867,840...1,894,483
JBrowse link
G Znf367 zinc finger protein 367 ISO CTD Direct Evidence: marker/mechanism CTD PMID:29581250 NCBI chrNW_004936487:333,952...347,465
Ensembl chrNW_004936487:336,218...346,869
JBrowse link
Familial Prostate Cancer term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adgrg1 adhesion G protein-coupled receptor G1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:29892016 NCBI chrNW_004936475:9,653,233...9,683,258
Ensembl chrNW_004936475:9,671,868...9,681,988
JBrowse link
G Ar androgen receptor ISO ClinVar Annotator: match by term: Prostate cancer susceptibility ClinVar PMID:8530589 PMID:10589774 PMID:11103816 PMID:28492532 NCBI chrNW_004936635:485,903...647,820
Ensembl chrNW_004936635:485,903...647,932
JBrowse link
G Arhgap6 Rho GTPase activating protein 6 ISO CTD Direct Evidence: marker/mechanism CTD PMID:29892016 NCBI chrNW_004936470:1,048,145...1,501,970
Ensembl chrNW_004936470:1,049,461...1,500,877
JBrowse link
G Atat1 alpha tubulin acetyltransferase 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:29892016 NCBI chrNW_004936837:300,765...319,742
Ensembl chrNW_004936837:300,715...319,623
JBrowse link
G Atm ATM serine/threonine kinase ISO ClinVar Annotator: match by term: Familial prostate cancer ClinVar PMID:15928302 PMID:16941484 PMID:17124347 PMID:17910737 PMID:19431188 More... NCBI chrNW_004936551:359,134...534,672
Ensembl chrNW_004936551:359,362...532,211
JBrowse link
G B3gat1 beta-1,3-glucuronyltransferase 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:29892016 NCBI chrNW_004936684:1,252,874...1,275,469
Ensembl chrNW_004936684:1,265,502...1,273,953
JBrowse link
G Bcas1 brain enriched myelin associated protein 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:29892016 NCBI chrNW_004936514:1,546,833...1,634,269
Ensembl chrNW_004936514:1,561,848...1,638,722
JBrowse link
G Bcl2 BCL2 apoptosis regulator ISO CTD Direct Evidence: marker/mechanism CTD PMID:29892016 NCBI chrNW_004936497:2,209,136...2,373,580
Ensembl chrNW_004936497:2,210,334...2,210,921
JBrowse link
G Bcl2l11 BCL2 like 11 ISO CTD Direct Evidence: marker/mechanism CTD PMID:29892016 NCBI chrNW_004936783:15,493...50,959
Ensembl chrNW_004936783:18,194...50,983
JBrowse link
G Bltp3a bridge-like lipid transfer protein family member 3A ISO CTD Direct Evidence: marker/mechanism CTD PMID:29892016 NCBI chrNW_004936476:24,273,233...24,358,518
Ensembl chrNW_004936476:24,290,182...24,358,337
JBrowse link
G Brca1 BRCA1 DNA repair associated ISO ClinVar Annotator: match by term: Familial prostate cancer ClinVar PMID:17319787 PMID:18489799 PMID:20104584 PMID:21203900 PMID:25525159 More... NCBI chrNW_004936490:17,735,444...17,801,456 JBrowse link
G Brca2 BRCA2 DNA repair associated ISO ClinVar Annotator: match by term: Familial prostate cancer | ClinVar Annotator: match by term: Hereditary Prostate Cancer | ClinVar Annotator: match by term: Hereditary prostate cancer ClinVar PMID:186727 PMID:251866 PMID:8075631 PMID:8524414 PMID:8589730 More... NCBI chrNW_004936472:26,945,659...27,017,693 JBrowse link
G Casp8 caspase 8 ISO CTD Direct Evidence: marker/mechanism CTD PMID:29892016 NCBI chrNW_004936726:554,627...596,334
Ensembl chrNW_004936726:554,758...595,922
JBrowse link
G Cdca7 cell division cycle associated 7 ISO CTD Direct Evidence: marker/mechanism CTD PMID:29892016 NCBI chrNW_004936509:3,249,282...3,261,296 JBrowse link
G Cdh1 cadherin 1 ISO ClinVar Annotator: match by term: Hereditary prostate cancer | ClinVar Annotator: match by term: Prostate cancer susceptibility ClinVar PMID:11948460 PMID:14961571 PMID:15235021 PMID:16061854 PMID:16189707 More... NCBI chrNW_004936475:18,990,529...19,065,954
Ensembl chrNW_004936475:18,990,474...19,067,203
JBrowse link
G Cdkn1b cyclin dependent kinase inhibitor 1B ISO CTD Direct Evidence: marker/mechanism CTD PMID:29892016 NCBI chrNW_004936587:4,573,166...4,578,480
Ensembl chrNW_004936587:4,572,728...4,578,461
JBrowse link
G Chd3 chromodomain helicase DNA binding protein 3 ISO CTD Direct Evidence: marker/mechanism CTD PMID:29892016 NCBI chrNW_004936595:1,131,198...1,154,615
Ensembl chrNW_004936595:1,130,078...1,157,822
JBrowse link
G Chek2 checkpoint kinase 2 ISO ClinVar Annotator: match by term: Familial prostate cancer | ClinVar Annotator: match by term: Hereditary Prostate Cancer | ClinVar Annotator: match by term: Hereditary prostate cancer | ClinVar Annotator: match by term: Prostate cancer susceptibility ClinVar PMID:9536098 PMID:10617473 PMID:11053450 PMID:11298456 PMID:11390408 More... NCBI chrNW_004936657:2,805,947...2,848,180
Ensembl chrNW_004936657:2,805,959...2,848,180
JBrowse link
G Col23a1 collagen type XXIII alpha 1 chain ISO CTD Direct Evidence: marker/mechanism CTD PMID:29892016 NCBI chrNW_004936647:93,536...456,623
Ensembl chrNW_004936647:94,258...452,849
JBrowse link
G CUNH11orf65 chromosome unknown C11orf65 homolog ISO ClinVar Annotator: match by term: Familial prostate cancer ClinVar PMID:15928302 PMID:16941484 PMID:17124347 PMID:17910737 PMID:19431188 More... NCBI chrNW_004936551:305,617...343,369
Ensembl chrNW_004936551:305,611...351,063
JBrowse link
G Dennd4b DENN domain containing 4B ISO CTD Direct Evidence: marker/mechanism CTD PMID:29892016 NCBI chrNW_004936580:3,677,594...3,691,531
Ensembl chrNW_004936580:3,676,267...3,691,537
JBrowse link
G Dnmt3b DNA methyltransferase 3 beta ISO CTD Direct Evidence: marker/mechanism CTD PMID:29892016 NCBI chrNW_004936485:19,547,836...19,570,716 JBrowse link
G Dock2 dedicator of cytokinesis 2 ISO CTD Direct Evidence: marker/mechanism CTD PMID:29892016 NCBI chrNW_004936609:4,695,202...5,099,038
Ensembl chrNW_004936609:4,695,628...5,099,038
JBrowse link
G Emsy EMSY transcriptional repressor, BRCA2 interacting ISO CTD Direct Evidence: marker/mechanism CTD PMID:29892016 NCBI chrNW_004936498:5,130,503...5,213,341
Ensembl chrNW_004936498:5,130,470...5,213,919
JBrowse link
G Fbrsl1 fibrosin like 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:29892016 NCBI chrNW_004936660:2,483,674...2,545,518 JBrowse link
G Haus6 HAUS augmin like complex subunit 6 ISO CTD Direct Evidence: marker/mechanism CTD PMID:29892016 NCBI chrNW_004936652:995,667...1,036,766
Ensembl chrNW_004936652:994,919...1,036,796
JBrowse link
G Hoxb13 homeobox B13 ISO ClinVar Annotator: match by term: Prostate cancer susceptibility ClinVar PMID:8756292 PMID:15964834 PMID:17138648 PMID:22236224 PMID:22714738 More... NCBI chrNW_004936490:12,688,572...12,690,908
Ensembl chrNW_004936490:12,688,559...12,690,908
JBrowse link
G Incenp inner centromere protein ISO CTD Direct Evidence: marker/mechanism CTD PMID:29892016 NCBI chrNW_004936581:999,148...1,028,157
Ensembl chrNW_004936581:999,497...1,025,062
JBrowse link
G Itgb8 integrin subunit beta 8 ISO CTD Direct Evidence: marker/mechanism CTD PMID:29892016 NCBI chrNW_004936546:6,352,186...6,447,458
Ensembl chrNW_004936546:6,353,986...6,442,756
JBrowse link
G Kdm2a lysine demethylase 2A ISO CTD Direct Evidence: marker/mechanism CTD PMID:29892016 NCBI chrNW_004936599:2,466,427...2,576,623
Ensembl chrNW_004936599:2,466,214...2,576,623
JBrowse link
G Knl1 kinetochore scaffold 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:29892016 NCBI chrNW_004936471:4,079,877...4,110,205
Ensembl chrNW_004936471:4,059,995...4,109,413
JBrowse link
G Larp4b La ribonucleoprotein 4B ISO CTD Direct Evidence: marker/mechanism CTD PMID:29892016 NCBI chrNW_004936484:13,238,456...13,302,962
Ensembl chrNW_004936484:13,238,528...13,299,448
JBrowse link
G LOC101963482 HLA class II histocompatibility antigen, DO alpha chain ISO CTD Direct Evidence: marker/mechanism CTD PMID:29892016 NCBI chrNW_004936476:25,786,322...25,790,881
Ensembl chrNW_004936476:25,787,492...25,790,950
JBrowse link
G Mad1l1 mitotic arrest deficient 1 like 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:29892016 NCBI chrNW_004936754:1,842,588...1,957,116 JBrowse link
G Map2k1 mitogen-activated protein kinase kinase 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:29892016 NCBI chrNW_004936471:26,589,251...26,628,302
Ensembl chrNW_004936471:26,589,161...26,628,302
JBrowse link
G Mbd2 methyl-CpG binding domain protein 2 ISO CTD Direct Evidence: marker/mechanism CTD PMID:29892016 NCBI chrNW_004936497:9,512,350...9,619,250
Ensembl chrNW_004936497:9,545,907...9,619,267
JBrowse link
G Mbnl1 muscleblind like splicing regulator 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:29892016 NCBI chrNW_004936519:419,332...580,706
Ensembl chrNW_004936519:419,571...580,730
JBrowse link
G Mecom MDS1 and EVI1 complex locus ISO CTD Direct Evidence: marker/mechanism CTD PMID:29892016 NCBI chrNW_004936593:2,742,236...3,282,596
Ensembl chrNW_004936593:3,106,202...3,282,596
JBrowse link
G Mmp14 matrix metallopeptidase 14 ISO CTD Direct Evidence: marker/mechanism CTD PMID:29892016 NCBI chrNW_004936722:1,447,189...1,457,632
Ensembl chrNW_004936722:1,447,335...1,457,611
JBrowse link
G Mob2 MOB kinase activator 2 ISO CTD Direct Evidence: marker/mechanism CTD PMID:29892016 NCBI chrNW_004936816:342,742...394,219
Ensembl chrNW_004936816:338,754...357,672
JBrowse link
G Msh6 mutS homolog 6 ISO ClinVar Annotator: match by term: Hereditary prostate cancer ClinVar PMID:18269114 PMID:24362816 PMID:25741868 PMID:28492532 NCBI chrNW_004936508:4,708,661...4,728,671
Ensembl chrNW_004936508:4,708,661...4,728,787
JBrowse link
G Myo9b myosin IXB ISO CTD Direct Evidence: marker/mechanism CTD PMID:29892016 NCBI chrNW_004936596:3,617,680...3,697,332
Ensembl chrNW_004936596:3,618,659...3,697,277
JBrowse link
G Nbn nibrin ISO ClinVar Annotator: match by term: Hereditary Prostate Cancer ClinVar PMID:9590180 PMID:9590181 PMID:9620777 PMID:10398434 PMID:10799436 More... NCBI chrNW_004936544:3,773,828...3,812,673
Ensembl chrNW_004936544:3,775,220...3,808,837
JBrowse link
G Pax9 paired box 9 ISO CTD Direct Evidence: marker/mechanism CTD PMID:29892016 NCBI chrNW_004936494:10,657,902...10,673,176
Ensembl chrNW_004936494:10,658,077...10,672,251
JBrowse link
G Pknox2 PBX/knotted 1 homeobox 2 ISO CTD Direct Evidence: marker/mechanism CTD PMID:29892016 NCBI chrNW_004936743:1,661,783...1,860,299
Ensembl chrNW_004936743:1,661,791...1,858,278
JBrowse link
G Pou2f2 POU class 2 homeobox 2 ISO CTD Direct Evidence: marker/mechanism CTD PMID:29892016 NCBI chrNW_004936706:335,613...393,854
Ensembl chrNW_004936706:320,539...392,414
JBrowse link
G Ppfibp2 PPFIA binding protein 2 ISO CTD Direct Evidence: marker/mechanism CTD PMID:29892016 NCBI chrNW_004936841:749,345...897,252
Ensembl chrNW_004936841:749,327...896,337
JBrowse link
G Pten phosphatase and tensin homolog ISO ClinVar Annotator: match by term: Hereditary Prostate Cancer ClinVar PMID:12844284 PMID:12938083 PMID:17847000 PMID:21194675 PMID:21956414 More... NCBI chrNW_004936735:1,252,414...1,338,318
Ensembl chrNW_004936735:1,252,414...1,338,323
JBrowse link
G Rassf3 Ras association domain family member 3 ISO CTD Direct Evidence: marker/mechanism CTD PMID:29892016 NCBI chrNW_004936545:2,894,761...2,961,994
Ensembl chrNW_004936545:2,894,755...2,962,000
JBrowse link
G Rfx7 regulatory factor X7 ISO CTD Direct Evidence: marker/mechanism CTD PMID:29892016 NCBI chrNW_004936471:17,465,926...17,588,838
Ensembl chrNW_004936471:17,465,925...17,588,844
JBrowse link
G Rnasel ribonuclease L ISO ClinVar Annotator: match by term: Prostate cancer susceptibility ClinVar PMID:12415269 PMID:16609730 PMID:25741868 NCBI chrNW_004936481:7,165,400...7,177,342
Ensembl chrNW_004936481:7,165,353...7,177,538
JBrowse link
G Rnf43 ring finger protein 43 ISO CTD Direct Evidence: marker/mechanism CTD PMID:29892016 NCBI chrNW_004936490:4,660,904...4,742,669
Ensembl chrNW_004936490:4,683,725...4,741,828
JBrowse link
G Rnls renalase, FAD dependent amine oxidase ISO CTD Direct Evidence: marker/mechanism CTD PMID:29892016 NCBI chrNW_004936735:659,826...1,048,135 JBrowse link
G Sugct succinyl-CoA:glutarate-CoA transferase ISO CTD Direct Evidence: marker/mechanism CTD PMID:29892016 NCBI chrNW_004936478:15,424,010...16,102,401
Ensembl chrNW_004936478:15,424,041...16,102,024
JBrowse link
G Tcf4 transcription factor 4 ISO CTD Direct Evidence: marker/mechanism CTD PMID:29892016 NCBI chrNW_004936497:8,410,882...8,765,678
Ensembl chrNW_004936497:8,410,860...8,764,296
JBrowse link
G Tcf7l2 transcription factor 7 like 2 ISO CTD Direct Evidence: marker/mechanism CTD PMID:29892016 NCBI chrNW_004936486:3,473,877...3,660,565
Ensembl chrNW_004936486:3,473,843...3,660,576
JBrowse link
G Tor1a torsin family 1 member A ISO CTD Direct Evidence: marker/mechanism CTD PMID:29892016 NCBI chrNW_004936487:17,012,661...17,020,657
Ensembl chrNW_004936487:17,011,670...17,020,699
JBrowse link
G Tshz1 teashirt zinc finger homeobox 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:29892016 NCBI chrNW_004936616:3,353,334...3,378,819
Ensembl chrNW_004936616:3,354,232...3,427,875
JBrowse link
G Ttc28 tetratricopeptide repeat domain 28 ISO CTD Direct Evidence: marker/mechanism CTD PMID:29892016 NCBI chrNW_004936657:2,209,509...2,800,879
Ensembl chrNW_004936657:2,212,808...2,308,742
JBrowse link
prostate adenocarcinoma term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adipoq adiponectin, C1Q and collagen domain containing susceptibility ISO DNA:SNPs, haplotypes:5' utr, introns, exon:multiple RGD PMID:21397927 RGD:8694410 NCBI chrNW_004936578:3,168,599...3,179,369
Ensembl chrNW_004936578:3,168,331...3,171,928
JBrowse link
G Adipor1 adiponectin receptor 1 susceptibility ISO DNA:SNPs, haplotype:intron, exon: (rs12733285, rs7539452) (human) RGD PMID:21397927 RGD:8694410 NCBI chrNW_004936567:1,658,405...1,674,794
Ensembl chrNW_004936567:1,658,383...1,676,199
JBrowse link
G Akt1 AKT serine/threonine kinase 1 treatment ISO RGD PMID:20638364 RGD:13504677 NCBI chrNW_004936621:620,163...639,115
Ensembl chrNW_004936621:620,074...639,093
JBrowse link
G Akt2 AKT serine/threonine kinase 2 treatment ISO RGD PMID:20638364 RGD:13504677 NCBI chrNW_004936661:2,652,568...2,694,039
Ensembl chrNW_004936661:2,652,566...2,694,086
JBrowse link
G Akt3 AKT serine/threonine kinase 3 treatment ISO RGD PMID:20638364 RGD:13504677 NCBI chrNW_004936526:6,944,056...7,201,226
Ensembl chrNW_004936526:6,944,005...7,200,583
JBrowse link
G Ar androgen receptor treatment ISO RGD PMID:18439064 RGD:10043341 NCBI chrNW_004936635:485,903...647,820
Ensembl chrNW_004936635:485,903...647,932
JBrowse link
G Bin1 bridging integrator 1 ISO RGD PMID:12532338 RGD:1580047 NCBI chrNW_004936469:44,128,308...44,185,739
Ensembl chrNW_004936469:44,127,970...44,185,246
JBrowse link
G Birc6 baculoviral IAP repeat containing 6 ameliorates ISO mRNA:increased expression:prostate gland (human) RGD PMID:31964418 RGD:153344516 NCBI chrNW_004936493:903,295...1,115,434
Ensembl chrNW_004936493:899,961...1,115,493
JBrowse link
G Birc7 baculoviral IAP repeat containing 7 exacerbates ISO mRNALincreased expression:prostate gland (human) RGD PMID:31964418 RGD:153344516 NCBI chrNW_004936514:10,618,347...10,622,906
Ensembl chrNW_004936514:10,618,289...10,622,931
JBrowse link
G Braf B-Raf proto-oncogene, serine/threonine kinase ISO RGD PMID:19079609 RGD:2315868 NCBI chrNW_004936592:4,728,371...4,833,830
Ensembl chrNW_004936592:4,737,011...4,834,664
JBrowse link
G Camk2n1 calcium/calmodulin dependent protein kinase II inhibitor 1 treatment ISO RGD PMID:25003983 RGD:18337280 NCBI chrNW_004936474:6,463,691...6,466,641
Ensembl chrNW_004936474:6,461,050...6,466,641
JBrowse link
G Ccnb1 cyclin B1 severity ISO RGD PMID:10193948 RGD:2315940 NCBI chrNW_004936480:400,287...407,677
Ensembl chrNW_004936480:399,224...407,704
JBrowse link
G Ccne2 cyclin E2 ISO RGD PMID:25315431 RGD:13504706 NCBI chrNW_004936544:7,839,730...7,852,251
Ensembl chrNW_004936544:7,839,113...7,851,335
JBrowse link
G Cd9 CD9 molecule disease_progression ISO DNA, mRNA:deletion, point mutation, decreased expression:prostate gland RGD PMID:17406028 RGD:2326197 NCBI chrNW_004936709:1,497,504...1,530,114 JBrowse link
G Chd4 chromodomain helicase DNA binding protein 4 ISO mRNA:decreased expression:prostate gland (human) RGD PMID:28486105 RGD:153323299 NCBI chrNW_004936709:1,183,243...1,214,144
Ensembl chrNW_004936709:1,183,254...1,214,149
JBrowse link
G Chuk component of inhibitor of nuclear factor kappa B kinase complex treatment ISO RGD PMID:26379052 RGD:13504774 NCBI chrNW_004936636:33,933...78,990
Ensembl chrNW_004936636:33,673...79,194
JBrowse link
G Clu clusterin treatment ISO RGD PMID:24118288 RGD:9068419 NCBI chrNW_004936675:499,745...513,515
Ensembl chrNW_004936675:499,199...513,836
JBrowse link
G Creb3l4 cAMP responsive element binding protein 3 like 4 ISO RGD PMID:11830526 PMID:17270658 RGD:13504714 RGD:13504715 NCBI chrNW_004936580:3,715,122...3,720,154
Ensembl chrNW_004936580:3,715,027...3,724,282
JBrowse link
G Ctnnb1 catenin beta 1 ISO ClinVar Annotator: match by term: Prostate adenocarcinoma ClinVar PMID:10192393 PMID:25741868 PMID:26619011 NCBI chrNW_004936473:29,999,542...30,034,610
Ensembl chrNW_004936473:29,999,562...30,038,293
JBrowse link
G Dnmt1 DNA methyltransferase 1 ISO mRNA,protein:increased expression:prostate gland: RGD PMID:17178860 RGD:2289681 NCBI chrNW_004936659:520,181...565,496
Ensembl chrNW_004936659:520,493...565,416
JBrowse link
G Dnmt3a DNA methyltransferase 3 alpha ISO mRNA:increased expression:prostate gland: RGD PMID:17178860 RGD:2289681 NCBI chrNW_004936493:6,963,406...7,013,256
Ensembl chrNW_004936493:6,935,386...7,007,610
JBrowse link
G Dnmt3b DNA methyltransferase 3 beta ISO mRNA,protein:increased expression:prostate gland: RGD PMID:17178860 RGD:2289681 NCBI chrNW_004936485:19,547,836...19,570,716 JBrowse link
G Fgfr1 fibroblast growth factor receptor 1 ISO RGD PMID:18068632 PMID:23576558 RGD:13504748 RGD:2298702 NCBI chrNW_004936710:1,760,365...1,815,269
Ensembl chrNW_004936710:1,760,089...1,815,508
JBrowse link
G Grb2 growth factor receptor bound protein 2 ISO RGD PMID:26103942 RGD:11056009 NCBI chrNW_004936594:592,760...661,369
Ensembl chrNW_004936594:592,740...661,369
JBrowse link
G Hras HRas proto-oncogene, GTPase ISO ClinVar Annotator: match by term: Adenocarcinoma of prostate
ClinVar Annotator: match by term: Adenocarcinoma of prostate | ClinVar Annotator: match by term: Prostate adenocarcinoma
ClinVar PMID:1904555 PMID:3510078 PMID:11150980 PMID:16155195 PMID:16170316 More... NCBI chrNW_004936888:375,372...378,125
Ensembl chrNW_004936888:375,377...377,958
JBrowse link
G Idh1 isocitrate dehydrogenase (NADP(+)) 1 ISO ClinVar Annotator: match by term: Prostate adenocarcinoma ClinVar PMID:18772396 PMID:19657110 PMID:19798509 PMID:19818334 PMID:20946881 More... NCBI chrNW_004936950:334,894...349,221
Ensembl chrNW_004936950:334,934...348,363
JBrowse link
G Igf1r insulin like growth factor 1 receptor treatment
disease_progression
ISO RGD PMID:8692980 PMID:25442907 PMID:25862373 PMID:26452103 RGD:13504753 RGD:13504767 RGD:13504768 RGD:13504771 NCBI chrNW_004936483:4,563,995...4,860,231
Ensembl chrNW_004936483:4,564,512...4,852,925
JBrowse link
G Ikbkb inhibitor of nuclear factor kappa B kinase subunit beta treatment ISO RGD PMID:27196761 RGD:13504772 NCBI chrNW_004936785:358,128...406,751
Ensembl chrNW_004936785:356,168...406,773
JBrowse link
G Ilk integrin linked kinase disease_progression ISO protein:increased expression:tumor: high-grade tumors versus adjacent BHP (P<0.001), BHP from cancer-free patients (P<0.002), or low-grade tumors (P=0.003), also associated with proliferative index (P=0.001), but inversely related to 5-year survival (p=0.004) RGD PMID:11448915 RGD:2301734 NCBI chrNW_004936842:661,961...667,993
Ensembl chrNW_004936842:661,996...667,993
JBrowse link
G Insr insulin receptor treatment ISO RGD PMID:26452103 RGD:13504753 NCBI chrNW_004936588:4,345,306...4,453,380
Ensembl chrNW_004936588:4,345,306...4,453,668
JBrowse link
G Jun Jun proto-oncogene, AP-1 transcription factor subunit disease_progression ISO protein:increased expression, increased activation:significantly higher levels in invading vs organ-confined specimens (P<0.001) RGD PMID:9748134 RGD:2290484 NCBI chrNW_004936522:3,034,364...3,037,632
Ensembl chrNW_004936522:3,035,346...3,036,350
JBrowse link
G Kdr kinase insert domain receptor ISO protein:increased expression:prostate gland
protein:increased expression:tumor:relative to benign prostatic hypertrophy (BPH) tissue
RGD PMID:17491265 PMID:20808233 RGD:2291925 RGD:5684541 NCBI chrNW_004936482:17,537,697...17,581,320
Ensembl chrNW_004936482:17,538,864...17,581,002
JBrowse link
G Map2k1 mitogen-activated protein kinase kinase 1 disease_progression ISO metastasis; inhibition reduced invasiveness of prostate tumor cells RGD PMID:12688676 RGD:2292631 NCBI chrNW_004936471:26,589,251...26,628,302
Ensembl chrNW_004936471:26,589,161...26,628,302
JBrowse link
G Mapk1 mitogen-activated protein kinase 1 treatment ISO RGD PMID:22139534 PMID:28492138 RGD:13504818 RGD:13504820 NCBI chrNW_004936619:1,889,841...1,932,646
Ensembl chrNW_004936619:1,889,708...1,932,646
JBrowse link
G Myc MYC proto-oncogene, bHLH transcription factor ISO human gene in mouse model RGD PMID:14522256 PMID:20195545 RGD:7207413 RGD:7207781 NCBI chrNW_004936470:20,480,844...20,485,955
Ensembl chrNW_004936470:20,480,829...20,485,965
JBrowse link
G Ncoa2 nuclear receptor coactivator 2 ameliorates ISO human cells in mouse model RGD PMID:25664849 RGD:153002575 NCBI chrNW_004936496:14,844,923...15,102,922
Ensembl chrNW_004936496:14,844,855...15,016,454
JBrowse link
G Nfkbia NFKB inhibitor alpha severity ISO protein:increased serine phosphorylation RGD PMID:15073126 PMID:15712212 RGD:13506768 RGD:2298768 NCBI chrNW_004936494:9,537,793...9,541,187
Ensembl chrNW_004936494:9,537,008...9,541,612
JBrowse link
G Pam peptidylglycine alpha-amidating monooxygenase ISO mRNA:increased expression:prostate gland (human) RGD PMID:11221851 RGD:6483769 NCBI chrNW_004936523:1,492,795...1,786,942
Ensembl chrNW_004936523:1,493,450...1,750,524
JBrowse link
G Pdgfa platelet derived growth factor subunit A ISO protein:increased expression:prostate RGD PMID:7524068 RGD:2292156 NCBI chrNW_004936754:808,894...828,554
Ensembl chrNW_004936754:808,213...828,613
JBrowse link
G Pdgfra platelet derived growth factor receptor alpha ISO protein:increased expression:prostate RGD PMID:7524068 RGD:2292156 NCBI chrNW_004936482:16,804,129...16,853,539
Ensembl chrNW_004936482:16,807,569...16,853,587
JBrowse link
G Pdpk1 3-phosphoinositide dependent protein kinase 1 treatment ISO RGD PMID:17562488 RGD:13506808 NCBI chrNW_004936694:1,444,819...1,487,628
Ensembl chrNW_004936694:1,444,880...1,488,265
Ensembl chrNW_004936694:1,444,880...1,488,265
JBrowse link
G Pik3ca phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha ISO ClinVar Annotator: match by term: Adenocarcinoma of prostate ClinVar PMID:15016963 PMID:15254419 PMID:15647370 PMID:15805248 PMID:18676830 More... NCBI chrNW_004936566:3,924,013...3,951,052
Ensembl chrNW_004936566:3,923,934...3,951,073
JBrowse link
G Pik3cb phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit beta treatment ISO RGD PMID:18755892 RGD:13217420 NCBI chrNW_004936540:907,118...1,041,814
Ensembl chrNW_004936540:907,112...1,041,848
JBrowse link
G Prkcq protein kinase C theta ISO mRNA:increased expression:prostate RGD PMID:8180127 RGD:1625625 NCBI chrNW_004936484:8,048,239...8,166,058
Ensembl chrNW_004936484:8,048,132...8,167,636
JBrowse link
G Raf1 Raf-1 proto-oncogene, serine/threonine kinase treatment ISO RGD PMID:15754006 RGD:13506897 NCBI chrNW_004936602:1,089,979...1,114,376
Ensembl chrNW_004936602:1,051,205...1,117,096
JBrowse link
G Rela RELA proto-oncogene, NF-kB subunit disease_progression ISO protein:increased expression:prostate gland RGD PMID:15073126 PMID:15712212 RGD:13506768 RGD:2298768 NCBI chrNW_004936599:3,800,142...3,810,583
Ensembl chrNW_004936599:3,801,636...3,809,813
JBrowse link
G Stat1 signal transducer and activator of transcription 1 disease_progression ISO protein:increased activity:prostate RGD PMID:9748134 RGD:2290484 NCBI chrNW_004936506:7,196,860...7,235,854
Ensembl chrNW_004936506:7,196,797...7,233,756
JBrowse link
G Tert telomerase reverse transcriptase treatment ISO RGD PMID:19903903 RGD:11038656 NCBI chrNW_004936815:468,987...492,666
Ensembl chrNW_004936815:469,020...491,697
JBrowse link
G Tmprss2 transmembrane serine protease 2 disease_progression ISO protein:increased expression, altered localization:prostate gland RGD PMID:18338334 RGD:2324904 NCBI chrNW_004936500:2,199,877...2,222,174
Ensembl chrNW_004936500:2,199,835...2,222,174
JBrowse link
G Tp53 tumor protein p53 ISO ClinVar Annotator: match by term: Adenocarcinoma of prostate
ClinVar Annotator: match by term: Prostate adenocarcinoma
ClinVar PMID:1565143 PMID:1565144 PMID:11370630 PMID:12826609 PMID:19468865 More... NCBI chrNW_004936595:919,807...935,367
Ensembl chrNW_004936595:919,428...925,425
JBrowse link
Prostate Cancer, Hereditary, 1 term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Braf B-Raf proto-oncogene, serine/threonine kinase ISO ClinVar Annotator: match by term: Prostate cancer, hereditary, 1 ClinVar PMID:12068308 PMID:15035987 PMID:16439621 PMID:17096326 PMID:17119447 More... NCBI chrNW_004936592:4,728,371...4,833,830
Ensembl chrNW_004936592:4,737,011...4,834,664
JBrowse link
G Hoxb13 homeobox B13 ISO ClinVar Annotator: match by term: Prostate cancer, hereditary, 1 ClinVar PMID:9536098 PMID:17576681 PMID:25741868 PMID:26467025 PMID:28492532 NCBI chrNW_004936490:12,688,572...12,690,908
Ensembl chrNW_004936490:12,688,559...12,690,908
JBrowse link
G Hras HRas proto-oncogene, GTPase ISO ClinVar Annotator: match by term: Prostate cancer, hereditary, 1 ClinVar NCBI chrNW_004936888:375,372...378,125
Ensembl chrNW_004936888:375,377...377,958
JBrowse link
G Kras KRAS proto-oncogene, GTPase ISO ClinVar Annotator: match by term: Prostate cancer, hereditary, 1 ClinVar PMID:17056636 PMID:17468812 PMID:17704260 PMID:18386799 PMID:20949621 More... NCBI chrNW_004936548:2,078,568...2,113,877
Ensembl chrNW_004936548:2,079,036...2,110,523
JBrowse link
G Lrrc56 leucine rich repeat containing 56 ISO ClinVar Annotator: match by term: Prostate cancer, hereditary, 1 ClinVar NCBI chrNW_004936888:379,622...397,647
Ensembl chrNW_004936888:382,062...402,083
JBrowse link
G Nras NRAS proto-oncogene, GTPase ISO ClinVar Annotator: match by term: Prostate cancer, hereditary, 1 ClinVar NCBI chrNW_004936627:73,413...82,590
Ensembl chrNW_004936627:73,413...82,590
JBrowse link
G Pten phosphatase and tensin homolog ISO ClinVar Annotator: match by term: Prostate cancer, hereditary, 1 ClinVar PMID:9467011 PMID:9600246 PMID:10051160 PMID:12786840 PMID:16773562 More... NCBI chrNW_004936735:1,252,414...1,338,318
Ensembl chrNW_004936735:1,252,414...1,338,323
JBrowse link
G Rnasel ribonuclease L ISO ClinVar Annotator: match by term: Prostate cancer, hereditary, 1 | ClinVar Annotator: match by term: RNASEL-related condition OMIM
ClinVar
PMID:11799394 PMID:12415269 PMID:16609730 PMID:25741868 PMID:28492532 NCBI chrNW_004936481:7,165,400...7,177,342
Ensembl chrNW_004936481:7,165,353...7,177,538
JBrowse link
G Tp53 tumor protein p53 ISO ClinVar Annotator: match by term: Prostate cancer, hereditary, 1 ClinVar PMID:12826609 PMID:20522432 PMID:25741868 PMID:27545002 PMID:28492532 More... NCBI chrNW_004936595:919,807...935,367
Ensembl chrNW_004936595:919,428...925,425
JBrowse link
G Vegfa vascular endothelial growth factor A ISO ClinVar Annotator: match by term: Prostate cancer, hereditary, 1 ClinVar NCBI chrNW_004936476:16,245,134...16,261,180
Ensembl chrNW_004936476:16,247,100...16,260,673
JBrowse link
Prostate Cancer, Hereditary, 12 term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ehbp1 EH domain binding protein 1 ISO ClinVar Annotator: match by term: EHBP1-related condition | ClinVar Annotator: match by term: Prostate cancer, hereditary, 12 OMIM
ClinVar
PMID:18264098 PMID:25741868 NCBI chrNW_004936491:7,875,119...8,176,559
Ensembl chrNW_004936491:7,875,014...8,177,654
JBrowse link
Prostate Cancer, Hereditary, 13 term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Msmb microseminoprotein beta ISO ClinVar Annotator: match by term: Prostate cancer, hereditary, 13 OMIM
ClinVar
PMID:18264096 PMID:18264097 PMID:19153072 PMID:19383797 PMID:19644707 NCBI chrNW_004936728:354,769...374,696 JBrowse link
Prostate Cancer, Hereditary, 2 term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Elac2 elaC ribonuclease Z 2 ISO ClinVar Annotator: match by term: ELAC2-related condition | ClinVar Annotator: match by term: Prostate cancer, hereditary, 2 OMIM
ClinVar
PMID:10986046 PMID:11175785 PMID:11254448 PMID:11507049 PMID:12515253 More... NCBI chrNW_004936595:5,543,476...5,565,075
Ensembl chrNW_004936595:5,543,221...5,565,200
JBrowse link
Prostate Cancer, Hereditary, 9 term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hoxb13 homeobox B13 ISO ClinVar Annotator: match by term: HOXB13-related condition | ClinVar Annotator: match by term: Prostate cancer, hereditary, 9 OMIM
ClinVar
PMID:8756292 PMID:15964834 PMID:17138648 PMID:22236224 PMID:22714738 More... NCBI chrNW_004936490:12,688,572...12,690,908
Ensembl chrNW_004936490:12,688,559...12,690,908
JBrowse link
Prostate Cancer, Hereditary, X-Linked 3 term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ar androgen receptor ISO ClinVar Annotator: match by term: Prostate cancer, hereditary, X-linked 3 OMIM
ClinVar
PMID:17970778 PMID:23637914 PMID:25741868 PMID:27899157 PMID:28492532 More... NCBI chrNW_004936635:485,903...647,820
Ensembl chrNW_004936635:485,903...647,932
JBrowse link
Prostate Cancer, Somatic term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ar androgen receptor ISO ClinVar Annotator: match by term: Prostate cancer, somatic ClinVar PMID:1631125 PMID:1779964 PMID:6541981 PMID:7723794 PMID:7795646 More... NCBI chrNW_004936635:485,903...647,820
Ensembl chrNW_004936635:485,903...647,932
JBrowse link
G Chek2 checkpoint kinase 2 ISO ClinVar Annotator: match by term: Prostate cancer, somatic ClinVar PMID:12533788 PMID:16835864 PMID:16941491 PMID:18058223 PMID:18996005 More... NCBI chrNW_004936657:2,805,947...2,848,180
Ensembl chrNW_004936657:2,805,959...2,848,180
JBrowse link
G Klf6 KLF transcription factor 6 ISO ClinVar Annotator: match by term: Prostate cancer, somatic ClinVar PMID:11752579 NCBI chrNW_004936484:10,470,384...10,476,682
Ensembl chrNW_004936484:10,470,332...10,478,119
JBrowse link
G Mad1l1 mitotic arrest deficient 1 like 1 ISO ClinVar Annotator: match by term: Prostate cancer, somatic ClinVar PMID:11423979 PMID:25741868 NCBI chrNW_004936754:1,842,588...1,957,116 JBrowse link
G Pten phosphatase and tensin homolog ISO ClinVar Annotator: match by term: Prostate cancer, somatic ClinVar PMID:9371490 NCBI chrNW_004936735:1,252,414...1,338,318
Ensembl chrNW_004936735:1,252,414...1,338,323
JBrowse link
G Zfhx3 zinc finger homeobox 3 ISO ClinVar Annotator: match by term: Prostate cancer, somatic ClinVar PMID:15750593 NCBI chrNW_004936475:21,005,242...21,235,992
Ensembl chrNW_004936475:21,080,302...21,231,544
JBrowse link
Prostate Cancer/Brain Cancer Susceptibility term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ephb2 EPH receptor B2 susceptibility ISO ClinVar Annotator: match by term: Prostate cancer/brain cancer susceptibility ClinVar
OMIM
PMID:15300251 PMID:16155194 PMID:25741868 PMID:28492532 NCBI chrNW_004936474:8,109,800...8,203,106
Ensembl chrNW_004936474:8,109,031...8,203,106
JBrowse link
prostate carcinoma term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Akt2 AKT serine/threonine kinase 2 treatment ISO RGD PMID:24838891 RGD:13504674 NCBI chrNW_004936661:2,652,568...2,694,039
Ensembl chrNW_004936661:2,652,566...2,694,086
JBrowse link
G Angpt1 angiopoietin 1 ISO protein:increased expression:prostate gland RGD PMID:11326698 RGD:1643336 NCBI chrNW_004936470:37,105,469...37,328,183
Ensembl chrNW_004936470:37,105,466...37,328,190
JBrowse link
G Atf4 activating transcription factor 4 treatment ISO RGD PMID:25680860 RGD:13504680 NCBI chrNW_004936492:2,114,478...2,115,969
Ensembl chrNW_004936492:2,110,634...2,115,996
JBrowse link
G Azgp1 alpha-2-glycoprotein 1, zinc-binding exacerbates ISO RGD PMID:11309332 RGD:153350158 NCBI chrNW_004936543:105,983...113,475
Ensembl chrNW_004936543:105,956...114,190
JBrowse link
G Bad BCL2 associated agonist of cell death ISO protein:increased expression:prostate gland RGD PMID:11781193 RGD:2292676 NCBI chrNW_004936599:4,924,349...4,933,683
Ensembl chrNW_004936599:4,924,789...4,933,368
JBrowse link
G Bax BCL2 associated X, apoptosis regulator disease_progression ISO protein:increased expression:prostate gland epithelium RGD PMID:17454944 RGD:1643355 NCBI chrNW_004936664:2,968,103...2,973,652
Ensembl chrNW_004936664:2,967,865...2,973,820
JBrowse link
G Bcl2l1 BCL2 like 1 ISO RGD PMID:17653717 RGD:1643474 NCBI chrNW_004936485:18,654,046...18,707,324 JBrowse link
G Bcl2l14 BCL2 like 14 ISO mRNA:decreased expression:prostate gland RGD PMID:14999772 RGD:2315712 NCBI chrNW_004936587:5,160,085...5,174,855
Ensembl chrNW_004936587:5,160,085...5,174,855
JBrowse link
G Bmp2 bone morphogenetic protein 2 disease_progression ISO protein:increased expression:prostate gland RGD PMID:16519147 RGD:1643592 NCBI chrNW_004936485:12,428,765...12,439,570
Ensembl chrNW_004936485:12,428,710...12,439,454
JBrowse link
G Bmp4 bone morphogenetic protein 4 disease_progression ISO protein:increased expression:prostate RGD PMID:16519147 RGD:1643592 NCBI chrNW_004936697:1,054,237...1,061,468
Ensembl chrNW_004936697:1,056,636...1,061,468
JBrowse link
G Casp6 caspase 6 ISO mRNA:increased expression:prostate gland RGD PMID:11406539 RGD:1582381 NCBI chrNW_004936563:912,502...920,025
Ensembl chrNW_004936563:911,304...919,119
JBrowse link
G Cdk13 cyclin dependent kinase 13 ameliorates ISO RGD PMID:33390186 RGD:155641232 NCBI chrNW_004936478:15,296,055...15,387,749
Ensembl chrNW_004936478:15,296,055...15,388,309
JBrowse link
G Cga glycoprotein hormones, alpha polypeptide ISO mRNA:increased expression:prostate gland RGD PMID:12180238 RGD:2293634 NCBI chrNW_004936510:4,679,349...4,696,511
Ensembl chrNW_004936510:4,679,321...4,696,529
JBrowse link
G Chi3l1 chitinase 3 like 1 severity ISO protein:increased secretion:serum (human) RGD PMID:16372331 RGD:4892641 NCBI chrNW_004936567:1,411,080...1,418,332
Ensembl chrNW_004936567:1,411,037...1,418,801
JBrowse link
G Crkl CRK like proto-oncogene, adaptor protein ISO protein:decreased tyrosine phosphorylation:prostate gland RGD PMID:16391854 RGD:7488899 NCBI chrNW_004936619:2,447,686...2,479,589
Ensembl chrNW_004936619:2,447,614...2,479,805
JBrowse link
G E2f5 E2F transcription factor 5 ameliorates ISO RGD PMID:33390186 RGD:155641232 NCBI chrNW_004936544:124,243...153,325
Ensembl chrNW_004936544:125,360...152,670
JBrowse link
G Eif3h eukaryotic translation initiation factor 3 subunit H ISO DNA:amplification RGD PMID:14997205 RGD:2289900 NCBI chrNW_004936470:29,509,154...29,606,124
Ensembl chrNW_004936470:29,509,151...29,606,124
JBrowse link
G Ghrh growth hormone releasing hormone ISO mRNA:increased expression:prostate RGD PMID:12364462 RGD:2289976 NCBI chrNW_004936561:3,946,256...3,954,472
Ensembl chrNW_004936561:3,950,340...3,952,405
JBrowse link
G Hdac2 histone deacetylase 2 disease_progression ISO protein:increased expression:prostate gland RGD PMID:18212746 RGD:2306214 NCBI chrNW_004936679:2,448,676...2,474,641
Ensembl chrNW_004936679:2,448,390...2,474,641
JBrowse link
G Hdac3 histone deacetylase 3 ISO protein:increased expression:prostate gland RGD PMID:18212746 RGD:2306214 NCBI chrNW_004936504:12,530,546...12,546,556
Ensembl chrNW_004936504:12,530,528...12,546,556
JBrowse link
G Hmbs hydroxymethylbilane synthase ISO mRNA:decreased expression:tumor:in matched malignant and non-malignant sample pairs (p = 0.009) RGD PMID:16211407 RGD:2301682 NCBI chrNW_004936542:4,037,888...4,046,089
Ensembl chrNW_004936542:4,037,201...4,050,810
JBrowse link
G Igf1r insulin like growth factor 1 receptor ISO RGD PMID:18079205 RGD:13504770 NCBI chrNW_004936483:4,563,995...4,860,231
Ensembl chrNW_004936483:4,564,512...4,852,925
JBrowse link
G Inha inhibin subunit alpha ISO DNA:hypermethylation,loss of heterozygosity:promoter,genomic region:significant hypermethylation (P<0.001) in tumors vs nonmalignant controls, LOH at 2q32-36 in 42% of cases RGD PMID:11818495 RGD:2290381 NCBI chrNW_004936569:1,949,747...1,954,179
Ensembl chrNW_004936569:1,950,297...1,954,165
JBrowse link
G Jun Jun proto-oncogene, AP-1 transcription factor subunit ISO protein:increased activation:tumor:nuclear localization in 13/16 (81.25%) of BPH and 31/36 (86.1%) of adenocarcinomas (PCa) with significantly stronger staining in PCa (P=0.006) RGD PMID:16413376 RGD:2290480 NCBI chrNW_004936522:3,034,364...3,037,632
Ensembl chrNW_004936522:3,035,346...3,036,350
JBrowse link
G Met MET proto-oncogene, receptor tyrosine kinase disease_progression ISO protein:increased expression:primary tumor, metastatic carcinoma (human) RGD PMID:7639332 RGD:2317554 NCBI chrNW_004936589:2,280,803...2,390,179
Ensembl chrNW_004936589:2,280,799...2,390,179
JBrowse link
G Mgp matrix Gla protein ISO mRNA:increased expression:primary tumor; mRNA:decreased expression:metastatic tissue:decreased or absent expression in metastases and cell lines from metastatic tumors RGD PMID:1399132 RGD:2293578 NCBI chrNW_004936587:2,601,419...2,605,848
Ensembl chrNW_004936587:2,601,312...2,605,870
JBrowse link
G Mki67 marker of proliferation Ki-67 ISO RGD PMID:22268182 RGD:6483545 NCBI chrNW_004936486:15,561,327...15,587,109 JBrowse link
G Mmp7 matrix metallopeptidase 7 ISO RGD PMID:11406539 RGD:1582381 NCBI chrNW_004936551:5,388,456...5,395,071
Ensembl chrNW_004936551:5,388,459...5,395,071
JBrowse link
G Pdgfb platelet derived growth factor subunit B ISO RGD PMID:23297038 RGD:13506769 NCBI chrNW_004936492:2,353,840...2,368,573
Ensembl chrNW_004936492:2,353,841...2,368,573
JBrowse link
G Pdgfd platelet derived growth factor D disease_progression ISO RGD PMID:21098708 RGD:13506773 NCBI chrNW_004936551:3,974,140...4,197,852
Ensembl chrNW_004936551:3,974,104...4,198,927
JBrowse link
G Plk1 polo like kinase 1 ISO mRNA, protein:increased expression:prostate gland RGD PMID:15948124 RGD:2299939 NCBI chrNW_004936501:8,321,415...8,332,414
Ensembl chrNW_004936501:8,321,305...8,332,424
JBrowse link
G Prkca protein kinase C alpha ISO RGD PMID:9474241 RGD:2292463 NCBI chrNW_004936541:6,231,604...6,488,201
Ensembl chrNW_004936541:6,233,110...6,488,052
JBrowse link
G Sars1 seryl-tRNA synthetase 1 ISO mRNA:decreased expression:prostate gland (human) RGD PMID:26317032 RGD:41410436 NCBI chrNW_004936704:747,109...766,981
Ensembl chrNW_004936704:746,775...771,305
JBrowse link
G Skp2 S-phase kinase associated protein 2 ISO RGD PMID:12670908 RGD:2315046 NCBI chrNW_004936518:5,635,856...5,664,057
Ensembl chrNW_004936518:5,637,331...5,664,778
JBrowse link
G Spint1 serine peptidase inhibitor, Kunitz type 1 disease_progression ISO protein:decreased expression:prostate gland (human) RGD PMID:16492908 RGD:1581314 NCBI chrNW_004936471:4,238,883...4,251,291
Ensembl chrNW_004936471:4,238,845...4,251,350
JBrowse link
G Spp1 secreted phosphoprotein 1 ISO RGD PMID:16331611 RGD:1581362 NCBI chrNW_004936905:148,956...156,023
Ensembl chrNW_004936905:148,945...156,079
JBrowse link
G Stat3 signal transducer and activator of transcription 3 ISO protein:increased activity:prostate gland RGD PMID:11987152 PMID:18210874 RGD:2291910 RGD:2298538 NCBI chrNW_004936490:17,119,189...17,178,402
Ensembl chrNW_004936490:17,117,290...17,178,402
JBrowse link
G Stat6 signal transducer and activator of transcription 6 ISO protein:increased activity:tumor:significant increase in constitutive activation vs adjacent normal tissue and unrelated normal prostate, by EMSA RGD PMID:11912448 RGD:2298560 NCBI chrNW_004936646:1,297,530...1,312,508
Ensembl chrNW_004936646:1,296,290...1,312,157
JBrowse link
G Tmbim6 transmembrane BAX inhibitor motif containing 6 ISO mRNA:increased expression:prostate gland RGD PMID:12875974 RGD:2291960 NCBI chrNW_004936512:7,427,926...7,448,700
Ensembl chrNW_004936512:7,427,729...7,449,078
JBrowse link
G Tp73 tumor protein p73 disease_progression ISO mRNA, protein:increased expression:prostate gland RGD PMID:16254107 RGD:2290587 NCBI chrNW_004936737:171,894...211,464
Ensembl chrNW_004936737:172,467...211,464
JBrowse link
prostate carcinoma in situ term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Amacr alpha-methylacyl-CoA racemase disease_progression ISO RGD PMID:18343427 RGD:2315630 NCBI chrNW_004936518:7,072,436...7,088,927
Ensembl chrNW_004936518:7,072,403...7,088,929
JBrowse link
G Ang angiogenin ISO RGD PMID:19276260 RGD:2325697 NCBI chrNW_004936880:39,372...40,070 JBrowse link
G Apex1 apurinic/apyrimidinic endodeoxyribonuclease 1 ISO protein:increased expression, altered localization:prostate, cytoplasm RGD PMID:11309329 RGD:2315666 NCBI chrNW_004936877:666,545...669,351
Ensembl chrNW_004936877:666,523...669,338
JBrowse link
G Ar androgen receptor ISO CTD Direct Evidence: marker/mechanism CTD PMID:20601956 NCBI chrNW_004936635:485,903...647,820
Ensembl chrNW_004936635:485,903...647,932
JBrowse link
G Areg amphiregulin ISO protein:increased expression:prostate gland RGD PMID:14716741 RGD:2292659 NCBI chrNW_004936598:1,276,599...1,283,612
Ensembl chrNW_004936598:1,274,565...1,283,746
JBrowse link
G Atm ATM serine/threonine kinase ISO protein:increased serine phosphorylation:prostate gland RGD PMID:16997395 RGD:2293869 NCBI chrNW_004936551:359,134...534,672
Ensembl chrNW_004936551:359,362...532,211
JBrowse link
G Aurka aurora kinase A ISO protein:increased expression:prostate gland RGD PMID:15754349 PMID:16707419 RGD:2293877 RGD:2293883 NCBI chrNW_004936875:295,238...310,457 JBrowse link
G Aurkb aurora kinase B ISO RGD PMID:16707419 RGD:2293877 NCBI chrNW_004936595:1,435,601...1,437,423
Ensembl chrNW_004936595:1,435,852...1,440,351
JBrowse link
G Btg2 BTG anti-proliferation factor 2 ISO protein:decreased expression:prostate gland RGD PMID:11470758 RGD:2289070 NCBI chrNW_004936567:1,310,525...1,314,469
Ensembl chrNW_004936567:1,309,658...1,314,515
JBrowse link
G Carm1 coactivator associated arginine methyltransferase 1 ISO protein:increased expression:prostate gland RGD PMID:15221992 RGD:2293206 NCBI chrNW_004936659:1,071,883...1,120,917
Ensembl chrNW_004936659:1,090,164...1,123,920
JBrowse link
G Ccnd1 cyclin D1 ISO mRNA, protein:decreased expression:prostate gland RGD PMID:14968434 RGD:2289283 Ensembl chrNW_004936599:973,838...983,316 JBrowse link
G Ccne1 cyclin E1 ISO mRNA, protein:increased expression:prostate gland RGD PMID:14968434 RGD:2289283 NCBI chrNW_004936570:5,536,817...5,547,880
Ensembl chrNW_004936570:5,536,672...5,548,008
JBrowse link
G Cdh1 cadherin 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:22581815 NCBI chrNW_004936475:18,990,529...19,065,954
Ensembl chrNW_004936475:18,990,474...19,067,203
JBrowse link
G Cdkn1b cyclin dependent kinase inhibitor 1B ISO CTD Direct Evidence: therapeutic CTD
RGD
PMID:18691549 PMID:20932324 RGD:2299085 NCBI chrNW_004936587:4,573,166...4,578,480
Ensembl chrNW_004936587:4,572,728...4,578,461
JBrowse link
G Creb3l4 cAMP responsive element binding protein 3 like 4 severity ISO RGD PMID:17270658 RGD:13504714 NCBI chrNW_004936580:3,715,122...3,720,154
Ensembl chrNW_004936580:3,715,027...3,724,282
JBrowse link
G Csf1r colony stimulating factor 1 receptor ISO protein:increased expression:prostate gland RGD PMID:12381783 RGD:2293712 NCBI chrNW_004936504:4,898,947...4,927,195
Ensembl chrNW_004936504:4,898,945...4,928,923
JBrowse link
G Dnmt1 DNA methyltransferase 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:22581815 NCBI chrNW_004936659:520,181...565,496
Ensembl chrNW_004936659:520,493...565,416
JBrowse link
G Esr1 estrogen receptor 1 ISO CTD Direct Evidence: marker/mechanism CTD
RGD
PMID:16220300 PMID:22025007 RGD:8553211 NCBI chrNW_004936489:4,616,839...4,887,179
Ensembl chrNW_004936489:4,614,754...4,887,171
JBrowse link
G Esr2 estrogen receptor 2 treatment ISO CTD Direct Evidence: marker/mechanism CTD
RGD
PMID:16220300 PMID:22025007 RGD:8553211 NCBI chrNW_004936495:7,956,168...8,018,356
Ensembl chrNW_004936495:7,956,766...8,004,357
JBrowse link
G Fgf6 fibroblast growth factor 6 ISO protein:increased expression:prostate gland RGD PMID:2289066 RGD:2301089 NCBI chrNW_004936606:4,613,052...4,624,587
Ensembl chrNW_004936606:4,613,048...4,624,587
JBrowse link
G Fgf8 fibroblast growth factor 8 ISO RGD PMID:12208767 RGD:2301097 NCBI chrNW_004936600:4,004,847...4,010,626
Ensembl chrNW_004936600:4,004,824...4,010,689
JBrowse link
G Fgfr1 fibroblast growth factor receptor 1 ISO RGD PMID:18068632 RGD:2298702 NCBI chrNW_004936710:1,760,365...1,815,269
Ensembl chrNW_004936710:1,760,089...1,815,508
JBrowse link
G Fgfr2 fibroblast growth factor receptor 2 ISO RGD PMID:14695195 RGD:2301192 NCBI chrNW_004936486:10,506,680...10,606,272
Ensembl chrNW_004936486:10,507,097...10,602,019
JBrowse link
G Flt1 fms related receptor tyrosine kinase 1 ISO protein:decreased expression:prostate gland RGD PMID:10893635 RGD:2301255 NCBI chrNW_004936472:23,442,946...23,617,523
Ensembl chrNW_004936472:23,440,088...23,617,041
JBrowse link
G Fzd4 frizzled class receptor 4 ISO protein:increased expression:prostate gland RGD PMID:18068632 RGD:2298702 NCBI chrNW_004936498:14,657,641...14,666,853
Ensembl chrNW_004936498:14,662,659...14,666,883
JBrowse link
G Gstp1 glutathione S-transferase pi 1 ISO CTD Direct Evidence: marker/mechanism RGD
CTD
PMID:22581815 PMID:24312188 RGD:10401940 NCBI chrNW_004936599:2,197,681...2,200,642
Ensembl chrNW_004936599:2,197,634...2,201,050
JBrowse link
G Hdac1 histone deacetylase 1 ISO protein:increased expression:prostate gland RGD PMID:15042618 RGD:2306219 NCBI chrNW_004936474:15,320,635...15,351,418
Ensembl chrNW_004936474:15,320,729...15,350,860
JBrowse link
G Igf1 insulin like growth factor 1 ISO protein:increased expression:prostate gland RGD PMID:19171036 RGD:2306713 NCBI chrNW_004936492:11,709,623...11,784,028
Ensembl chrNW_004936492:11,709,222...11,778,351
JBrowse link
G Kras KRAS proto-oncogene, GTPase ISO RGD PMID:19117991 RGD:2314913 NCBI chrNW_004936548:2,078,568...2,113,877
Ensembl chrNW_004936548:2,079,036...2,110,523
JBrowse link
G Lef1 lymphoid enhancer binding factor 1 ISO RGD PMID:27067790 RGD:11531513 NCBI chrNW_004936818:453,635...569,194
Ensembl chrNW_004936818:453,635...567,469
JBrowse link
G LOC101954950 aromatase ISO RGD PMID:19700748 RGD:7257711 NCBI chrNW_004936471:13,107,603...13,136,910
Ensembl chrNW_004936471:13,107,603...13,136,910
JBrowse link
G Lrp1 LDL receptor related protein 1 ISO protein:increased expression:prostate gland RGD PMID:14623925 RGD:1625030 NCBI chrNW_004936646:1,326,900...1,407,236
Ensembl chrNW_004936646:1,327,374...1,406,456
JBrowse link
G Map2k4 mitogen-activated protein kinase kinase 4 disease_progression ISO protein:increased expression RGD PMID:17577251 RGD:2293334 NCBI chrNW_004936595:4,762,327...4,828,433
Ensembl chrNW_004936595:4,727,108...4,830,662
JBrowse link
G Map2k7 mitogen-activated protein kinase kinase 7 disease_progression ISO protein:increased expression RGD PMID:17577251 RGD:2293334 NCBI chrNW_004936588:4,882,191...4,891,807
Ensembl chrNW_004936588:4,882,184...4,892,071
JBrowse link
G Myc MYC proto-oncogene, bHLH transcription factor ISO RGD PMID:10861747 RGD:10059615 NCBI chrNW_004936470:20,480,844...20,485,955
Ensembl chrNW_004936470:20,480,829...20,485,965
JBrowse link
G Phb1 prohibitin 1 ISO mRNA, protein:increased expression:prostate gland RGD PMID:18384941 RGD:2292382 NCBI chrNW_004936490:12,127,065...12,138,870
Ensembl chrNW_004936490:12,127,065...12,138,870
JBrowse link
G Pim1 Pim-1 proto-oncogene, serine/threonine kinase ISO CTD Direct Evidence: marker/mechanism CTD PMID:23565217 NCBI chrNW_004936476:22,295,023...22,300,155
Ensembl chrNW_004936476:22,295,021...22,300,161
JBrowse link
G Prss8 serine protease 8 disease_progression ISO mRNA, protein:increased expression:prostate gland RGD PMID:12518323 RGD:2292484 NCBI chrNW_004936501:13,487,863...13,491,837
Ensembl chrNW_004936501:13,485,310...13,491,905
JBrowse link
G Pten phosphatase and tensin homolog ISO CTD Direct Evidence: marker/mechanism CTD
RGD
PMID:18268330 PMID:19081794 PMID:22581815 RGD:2292497 NCBI chrNW_004936735:1,252,414...1,338,318
Ensembl chrNW_004936735:1,252,414...1,338,323
JBrowse link
G Ptgs2 prostaglandin-endoperoxide synthase 2 ISO protein:altered localization RGD PMID:18468781 RGD:2300123 NCBI chrNW_004936481:3,821,564...3,828,086 JBrowse link
G Rela RELA proto-oncogene, NF-kB subunit ISO protein:increased expression:prostate gland RGD PMID:15570007 PMID:16278667 RGD:2298767 RGD:2298769 NCBI chrNW_004936599:3,800,142...3,810,583
Ensembl chrNW_004936599:3,801,636...3,809,813
JBrowse link
G Rxra retinoid X receptor alpha ISO protein:decreased expression:prostate RGD PMID:15318950 RGD:1643115 NCBI chrNW_004936669:2,735,111...2,763,060
Ensembl chrNW_004936669:2,738,448...2,763,070
JBrowse link
G Slc30a4 solute carrier family 30 member 4 ISO protein:decreased expression:prostate gland RGD PMID:12955079 RGD:2299948 NCBI chrNW_004936471:8,125,839...8,155,720
Ensembl chrNW_004936471:8,125,759...8,155,726
JBrowse link
G Smad4 SMAD family member 4 ISO protein:increased expression:prostate gland RGD PMID:15017584 RGD:2300005 NCBI chrNW_004936497:12,242,869...12,278,012
Ensembl chrNW_004936497:12,249,140...12,278,123
JBrowse link
G St14 ST14 transmembrane serine protease matriptase ISO protein:increased expression:prostate gland RGD PMID:18813126 RGD:2315088 NCBI chrNW_004936572:2,137,820...2,182,674
Ensembl chrNW_004936572:2,137,332...2,182,742
JBrowse link
G Stk11 serine/threonine kinase 11 ISO RGD PMID:18381428 RGD:2291943 NCBI chrNW_004936588:579,816...601,033
Ensembl chrNW_004936588:579,816...603,654
JBrowse link
G Timp4 TIMP metallopeptidase inhibitor 4 ISO RGD PMID:16940965 RGD:2290433 NCBI chrNW_004936602:1,488,993...1,496,108
Ensembl chrNW_004936602:1,489,545...1,495,478
JBrowse link
G Top2b DNA topoisomerase II beta ISO CTD Direct Evidence: marker/mechanism CTD PMID:20601956 NCBI chrNW_004936473:17,146,576...17,189,589
Ensembl chrNW_004936473:17,143,894...17,189,605
JBrowse link
G Tp63 tumor protein p63 ISO protein:decreased expression:prostate gland
CTD Direct Evidence: marker/mechanism
RGD
CTD
PMID:17189982 PMID:17982114 PMID:22581815 RGD:2315433 RGD:2315434 NCBI chrNW_004936578:492,267...705,282
Ensembl chrNW_004936578:491,507...705,729
JBrowse link
prostate small cell carcinoma term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Brca2 BRCA2 DNA repair associated ISO ClinVar Annotator: match by term: Metastatic Prostate Small Cell Carcinoma ClinVar PMID:10550133 PMID:10660329 PMID:11597388 PMID:11802209 PMID:15024741 More... NCBI chrNW_004936472:26,945,659...27,017,693 JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  disease 14641
    disease of anatomical entity 14330
      reproductive system disease 2976
        reproductive organ cancer 1328
          male reproductive organ cancer 777
            prostate cancer 773
              Familial Prostate Cancer + 69
              Prostate Cancer, Somatic 6
              Prostate Cancer/Brain Cancer Susceptibility 1
              prostate carcinoma + 140
              prostate lymphoma 0
              prostate malignant phyllodes tumor 0
              prostate neuroendocrine neoplasm 0
              prostate sarcoma + 0
Path 2
Term Annotations click to browse term
  disease 14641
    disease of anatomical entity 14330
      Urogenital Diseases 4671
        reproductive system disease 2976
          male reproductive system disease 1883
            Male Genital Neoplasms 1249
              Prostatic Neoplasms 1222
                prostate cancer 773
                  Familial Prostate Cancer + 69
                  Prostate Cancer, Somatic 6
                  Prostate Cancer/Brain Cancer Susceptibility 1
                  prostate carcinoma + 140
                  prostate lymphoma 0
                  prostate malignant phyllodes tumor 0
                  prostate neuroendocrine neoplasm 0
                  prostate sarcoma + 0
paths to the root