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RGD DISEASE ONTOLOGY - ANNOTATIONS

RGD uses the Human Disease Ontology (DO, https://disease-ontology.org/) for disease curation across species. RGD automatically downloads each new release of the ontology on a monthly basis. Some additional terms which are required for RGD's curation purposes but are not currently covered in the official version of DO have been added. As corresponding terms are added to DO, these custom terms are retired and the DO terms substituted in existing annotations and subsequently used for curation.

Term:autoimmune myocarditis
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Accession:DOID:0080767 term browser browse the term
Definition:An autoimmune disease of cardiovascular system that is characterized by inflammation of the heart muscle. (DO)
Synonyms:xref: GARD:9519



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autoimmune myocarditis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ifnb1 interferon beta 1 ameliorates ISO RGD PMID:15061762 RGD:401851923 NCBI chr 5:103,020,758...103,021,595
Ensembl chr 5:103,020,969...103,021,523
JBrowse link
G RT1-Ba RT1 class II, locus Ba exacerbates ISO associated with Coxsackievirus Infections RGD PMID:10364312 RGD:127285795 NCBI chr20:4,575,134...4,579,727
Ensembl chr20:4,575,134...4,579,744
JBrowse link
Experimental Autoimmune Myocarditis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adipoq adiponectin, C1Q and collagen domain containing ISO RGD PMID:23674516 RGD:8695925 NCBI chr11:77,721,912...77,735,644
Ensembl chr11:77,721,912...77,735,564
JBrowse link
G Ager advanced glycosylation end product-specific receptor IEP protein:increased expression:heart RGD PMID:24599045 RGD:8696002 NCBI chr20:4,148,150...4,151,361
Ensembl chr20:4,147,890...4,151,078
JBrowse link
G Casp3 caspase 3 treatment IEP
ISO
RGD PMID:28903333 PMID:23833961 RGD:13702869, RGD:13702874 NCBI chr16:45,662,910...45,681,171
Ensembl chr16:45,662,910...45,684,648
JBrowse link
G Casp8 caspase 8 treatment ISO RGD PMID:23833961 RGD:13702874 NCBI chr 9:60,263,863...60,312,542
Ensembl chr 9:60,264,075...60,312,542
JBrowse link
G Casp9 caspase 9 treatment ISO RGD PMID:23833961 RGD:13702874 NCBI chr 5:154,108,872...154,126,628
Ensembl chr 5:154,109,046...154,126,626
JBrowse link
G Cav1 caveolin 1 IEP RGD PMID:17060028 RGD:1625364 NCBI chr 4:45,640,624...45,673,708
Ensembl chr 4:45,634,918...45,673,705
JBrowse link
G Cav2 caveolin 2 IEP RGD PMID:17060028 RGD:1625364 NCBI chr 4:45,616,766...45,624,144
Ensembl chr 4:45,616,712...45,624,244
JBrowse link
G Ccl2 C-C motif chemokine ligand 2 disease_progression IEP mRNA, protein:increased expression:heart, serum (rat) RGD PMID:11472393 RGD:8549580 NCBI chr10:67,005,424...67,007,222
Ensembl chr10:67,005,424...67,007,226
JBrowse link
G Cd28 Cd28 molecule treatment
severity
IDA
ISO
RGD PMID:19907173 PMID:8759765 RGD:13702882, RGD:13702883 NCBI chr 9:62,166,324...62,194,674
Ensembl chr 9:62,166,192...62,194,685
JBrowse link
G Cd40 CD40 molecule treatment IMP RGD PMID:25297507 RGD:13702884 NCBI chr 3:153,790,372...153,805,279
Ensembl chr 3:153,790,449...153,805,534
JBrowse link
G Fgl2 fibrinogen-like 2 severity IEP RGD PMID:28892130 RGD:38549573 NCBI chr 4:13,710,566...13,716,207
Ensembl chr 4:13,710,575...13,716,207
JBrowse link
G Foxp3 forkhead box P3 severity
treatment
IEP RGD PMID:28892130 PMID:19907173 RGD:38549573, RGD:13702882 NCBI chr  X:14,908,494...14,924,994
Ensembl chr  X:14,908,494...14,923,838
JBrowse link
G Grk2 G protein-coupled receptor kinase 2 treatment IEP RGD PMID:30024944 RGD:13792695 NCBI chr 1:201,580,823...201,601,580
Ensembl chr 1:201,581,480...201,601,582
JBrowse link
G Hamp hepcidin antimicrobial peptide IEP mRNA:increased expression:heart RGD PMID:19615879 RGD:11041636 NCBI chr 1:86,170,926...86,172,865
Ensembl chr 1:86,170,901...86,172,891
JBrowse link
G Hmgb1 high mobility group box 1 IEP protein:increased expression:heart, serum RGD PMID:24599045 RGD:8696002 NCBI chr12:5,972,950...5,979,658
Ensembl chr12:5,901,586...5,978,565
Ensembl chr16:5,901,586...5,978,565
JBrowse link
G Hspa5 heat shock protein family A (Hsp70) member 5 treatment IEP RGD PMID:21927577 RGD:5685668 NCBI chr 3:18,055,507...18,059,969
Ensembl chr 3:18,055,405...18,059,891
JBrowse link
G Icam1 intercellular adhesion molecule 1 treatment IEP RGD PMID:11701617 RGD:13702911 NCBI chr 8:19,553,063...19,565,438
Ensembl chr 8:19,553,645...19,565,438
JBrowse link
G Il10 interleukin 10 treatment IEP RGD PMID:19907173 RGD:13702882 NCBI chr13:42,472,625...42,477,308
Ensembl chr13:42,472,839...42,477,313
JBrowse link
G Il13 interleukin 13 treatment IMP RGD PMID:15902684 RGD:8549607 NCBI chr10:37,790,130...37,792,687
Ensembl chr10:37,790,130...37,792,737
JBrowse link
G Il1rn interleukin 1 receptor antagonist treatment ISO mouse gene in a rat model RGD PMID:15795329 RGD:8551728 NCBI chr 3:7,111,567...7,127,451
Ensembl chr 3:7,111,550...7,127,445
JBrowse link
G Il6 interleukin 6 treatment IDA RGD PMID:26339812 RGD:11062109 NCBI chr 4:5,214,602...5,219,178
Ensembl chr 4:5,213,394...5,219,178
JBrowse link
G Kcna5 potassium voltage-gated channel subfamily A member 5 IEP RGD PMID:15306225 RGD:7242784 NCBI chr 4:159,354,689...159,358,173
Ensembl chr 4:159,350,097...159,357,697
JBrowse link
G Myh6 myosin heavy chain 6 ISO RGD PMID:10199887 RGD:12792956 NCBI chr15:28,418,120...28,442,316
Ensembl chr15:28,417,616...28,441,720
JBrowse link
G Pparg peroxisome proliferator-activated receptor gamma IEP protein:increased expression:myocardium (rat) RGD PMID:15167281 RGD:8553039 NCBI chr 4:148,423,102...148,548,471
Ensembl chr 4:148,423,194...148,548,468
JBrowse link
G Reg3b regenerating family member 3 beta IEP mRNA:increased expression:heart, cardiomyocyte (rat) RGD PMID:18774541 RGD:9831381 NCBI chr 4:110,861,775...110,865,015
Ensembl chr 4:110,861,775...110,865,015
JBrowse link
G Rorc RAR-related orphan receptor C severity IEP RGD PMID:28892130 RGD:38549573 NCBI chr 2:182,009,707...182,034,910
Ensembl chr 2:182,009,286...182,034,907
JBrowse link
G Rps6 ribosomal protein S6 IDA RGD PMID:22014063 RGD:11041642 NCBI chr 5:101,371,716...101,374,576
Ensembl chr 5:101,371,136...101,374,602
Ensembl chr 5:101,371,136...101,374,602
JBrowse link
G Sirt1 sirtuin 1 treatment IEP RGD PMID:17322642 RGD:9586020 NCBI chr20:25,307,225...25,329,273
Ensembl chr20:25,306,917...25,329,260
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  disease 21140
    disease of anatomical entity 18187
      cardiovascular system disease 5390
        autoimmune disease of cardiovascular system 146
          autoimmune myocarditis 30
            Experimental Autoimmune Myocarditis 28
Path 2
Term Annotations click to browse term
  disease 21140
    disease of anatomical entity 18187
      Immune & Inflammatory Diseases 5559
        immune system disease 4770
          primary immunodeficiency disease 4143
            autoimmune disease 2317
              autoimmune disease of cardiovascular system 146
                autoimmune myocarditis 30
                  Experimental Autoimmune Myocarditis 28
paths to the root