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RGD DISEASE ONTOLOGY - ANNOTATIONS

RGD uses the Human Disease Ontology (DO, https://disease-ontology.org/) for disease curation across species. RGD automatically downloads each new release of the ontology on a monthly basis. Some additional terms which are required for RGD's curation purposes but are not currently covered in the official version of DO have been added. As corresponding terms are added to DO, these custom terms are retired and the DO terms substituted in existing annotations and subsequently used for curation.
Term:hepatobiliary system cancer
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Accession:DOID:0080355 term browser browse the term
Definition:A gastrointestinal system cancer that is located_in the hepatobiliary system. (DO)
Synonyms:xref: EFO:0008550


show annotations for term's descendants           Sort by:
adenosquamous gallbladder carcinoma term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ddr2 discoidin domain receptor family, member 2 disease_progression ISO RGD PMID:29043607 RGD:150429712 NCBI chr 1:169,799,874...169,938,525
Ensembl chr 1:169,799,876...169,938,331 		JBrowse link
G Ifitm1 interferon induced transmembrane protein 1 disease_progression ISO RGD PMID:29043607 RGD:150429712 NCBI chr 7:140,547,342...140,549,740
Ensembl chr 7:140,547,134...140,549,738 		JBrowse link
aflatoxins-related hepatocellular carcinoma term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ephx1 epoxide hydrolase 1, microsomal ISO associated with estrogen excess;protein:increased activity;liver (rat) RGD PMID:6133380 RGD:152998935 NCBI chr 1:180,817,121...180,845,134
Ensembl chr 1:180,803,775...180,848,469 		JBrowse link
G Ggt1 gamma-glutamyltransferase 1 ISO associated with estrogen excess;protein:increased activity;liver (rat) RGD PMID:6133380 RGD:152998935 NCBI chr10:75,396,910...75,422,027
Ensembl chr10:75,397,438...75,422,034 		JBrowse link
bile duct adenocarcinoma term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Slc7a5 solute carrier family 7 (cationic amino acid transporter, y+ system), member 5 disease_progression ISO RGD PMID:24131658 RGD:151361287 NCBI chr 8:122,607,885...122,634,425
Ensembl chr 8:122,607,889...122,634,433 		JBrowse link
bile duct cancer term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apob apolipoprotein B susceptibility ISO DNA:polymorphisms:intron, exon:IVS6+360C>T, 56C>T (human) RGD PMID:18296645 RGD:2317550 NCBI chr12:8,027,629...8,066,839
Ensembl chr12:8,027,648...8,066,835 		JBrowse link
G Apoe apolipoprotein E susceptibility ISO DNA:SNP:intron:rs440446 (human) RGD PMID:18296645 RGD:2317550 NCBI chr 7:19,430,169...19,434,326
Ensembl chr 7:19,430,034...19,433,113 		JBrowse link
G Atm ataxia telangiectasia mutated ISO ClinVar Annotator: match by term: Bile duct cancer ClinVar PMID:9887333 PMID:17124347 PMID:20077034 PMID:25741868 PMID:26635394 More... NCBI chr 9:53,348,422...53,448,125
Ensembl chr 9:53,350,449...53,448,040 		JBrowse link
G Mir31 microRNA 31 exacerbates ISO RNA:increased expression:bile duct (human) RGD PMID:29860474 RGD:152998990 NCBI chr 4:88,828,794...88,828,899
Ensembl chr 4:88,828,794...88,828,899 		JBrowse link
G Mlh1 mutL homolog 1 ISO ClinVar Annotator: match by term: Bile duct cancer ClinVar PMID:15340264 PMID:17510385 PMID:18307539 PMID:19419416 PMID:22136435 More... NCBI chr 9:111,057,296...111,100,854
Ensembl chr 9:111,057,296...111,100,859 		JBrowse link
G Msh2 mutS homolog 2 ISO ClinVar Annotator: match by term: Bile duct cancer ClinVar PMID:25741868 PMID:33357406 NCBI chr17:87,979,960...88,031,141
Ensembl chr17:87,979,758...88,031,141 		JBrowse link
G Palb2 partner and localizer of BRCA2 ISO ClinVar Annotator: match by term: Bile duct cancer ClinVar PMID:25741868 PMID:26467025 PMID:28492532 PMID:30287823 NCBI chr 7:121,706,485...121,732,203
Ensembl chr 7:121,706,485...121,732,208 		JBrowse link
G Pkd1 polycystin 1, transient receptor potential channel interacting ISO ClinVar Annotator: match by term: Bile duct cancer ClinVar PMID:12007219 PMID:16430766 PMID:17574468 PMID:25741868 PMID:26467025 More... NCBI chr17:24,767,657...24,815,457
Ensembl chr17:24,768,808...24,815,482 		JBrowse link
G Pold1 polymerase (DNA directed), delta 1, catalytic subunit ISO ClinVar Annotator: match by term: Bile duct cancer ClinVar PMID:25741868 PMID:26467025 PMID:28492532 NCBI chr 7:44,182,168...44,198,239
Ensembl chr 7:44,182,170...44,198,273 		JBrowse link
G Stk11 serine/threonine kinase 11 ISO ClinVar Annotator: match by term: Bile duct cancer ClinVar PMID:25741868 PMID:28492532 NCBI chr10:79,951,602...79,966,513
Ensembl chr10:79,951,637...79,966,516 		JBrowse link
G Tjp1 tight junction protein 1 ISO protein:decreased expression:bile duct RGD PMID:19184677 RGD:2325030 NCBI chr 7:64,945,913...65,177,629
Ensembl chr 7:64,945,913...65,177,529 		JBrowse link
bile duct carcinoma term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Msln mesothelin ISO protein:increased expression:bile duct RGD PMID:17276942 RGD:2326059 NCBI chr17:25,967,587...25,973,352
Ensembl chr17:25,967,587...25,973,352 		JBrowse link
G Slc7a5 solute carrier family 7 (cationic amino acid transporter, y+ system), member 5 disease_progression ISO RGD PMID:24890221 RGD:151361210 NCBI chr 8:122,607,885...122,634,425
Ensembl chr 8:122,607,889...122,634,433 		JBrowse link
biliary tract cancer term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apob apolipoprotein B ISO protein:increased expression:serum RGD PMID:18076041 RGD:2325763 NCBI chr12:8,027,629...8,066,839
Ensembl chr12:8,027,648...8,066,835 		JBrowse link
G Cyp1a1 cytochrome P450, family 1, subfamily a, polypeptide 1 ISO DNA:polymorphism:exon:rs2606345 (human) RGD PMID:19168589 RGD:2317210 NCBI chr 9:57,595,211...57,611,107
Ensembl chr 9:57,595,211...57,611,107 		JBrowse link
G Ppard peroxisome proliferator activator receptor delta ISO RGD PMID:18497548 RGD:2324871 NCBI chr17:28,451,715...28,520,446
Ensembl chr17:28,451,674...28,520,448 		JBrowse link
childhood hepatocellular carcinoma term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Met met proto-oncogene ISO ClinVar Annotator: match by term: Pediatric hepatocellular carcinoma ClinVar PMID:9927037 NCBI chr 6:17,463,351...17,573,979
Ensembl chr 6:17,463,799...17,573,979 		JBrowse link
cholangiocarcinoma term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abcc2 ATP-binding cassette, sub-family member 2 susceptibility ISO DNA:polymorphism:exon:c.3972C>T (human) RGD PMID:19451719 RGD:2317508 NCBI chr19:43,770,747...43,826,771
Ensembl chr19:43,770,631...43,829,179 		JBrowse link
G Adrb2 adrenergic receptor, beta 2 ISO protein:decreased expression:liver RGD PMID:16292515 RGD:2325640 NCBI chr18:62,310,784...62,313,052
Ensembl chr18:62,310,887...62,313,030 		JBrowse link
G Alb albumin disease_progression ISO RGD PMID:10776430 PMID:20431764 PMID:17545000 RGD:2325682, RGD:2325679, RGD:2325680 NCBI chr 5:90,608,729...90,624,461
Ensembl chr 5:90,608,756...90,624,461 		JBrowse link
G Alox5 arachidonate 5-lipoxygenase ISO protein:increased expression:bile duct RGD PMID:18507031 RGD:2317521 NCBI chr 6:116,387,030...116,438,139
Ensembl chr 6:116,387,038...116,438,139 		JBrowse link
G Anxa2 annexin A2 disease_progression ISO RGD PMID:20493868 RGD:2325728 NCBI chr 9:69,360,978...69,399,074
Ensembl chr 9:69,360,902...69,399,077 		JBrowse link
G Anxa8 annexin A8 ISO RGD PMID:19376120 RGD:2325733 NCBI chr14:33,807,936...33,822,528
Ensembl chr14:33,807,938...33,822,528 		JBrowse link
G Apc APC, WNT signaling pathway regulator ISO DNA:hypermethylation:promoter
DNA:loss of heterozygosity 		RGD PMID:15467712 PMID:10212000 RGD:2317198, RGD:2317205 NCBI chr18:34,353,350...34,455,243
Ensembl chr18:34,353,977...34,455,605 		JBrowse link
G Apoa1 apolipoprotein A-I ISO protein:decreased expression:serum RGD PMID:19486127 RGD:2325756 NCBI chr 9:46,139,928...46,141,767
Ensembl chr 9:46,139,878...46,141,764 		JBrowse link
G Arid1a AT-rich interaction domain 1A ISO CTD Direct Evidence: marker/mechanism CTD PMID:24185509 NCBI chr 4:133,406,319...133,484,682
Ensembl chr 4:133,406,319...133,484,080 		JBrowse link
G Asph aspartate-beta-hydroxylase ISO RGD PMID:21898484 RGD:6902945 NCBI chr 4:9,449,085...9,669,344
Ensembl chr 4:9,448,069...9,669,344 		JBrowse link
G Atg101 autophagy related 101 disease_progression ISO RGD PMID:35592424 RGD:153350091 NCBI chr15:101,182,182...101,188,855
Ensembl chr15:101,182,153...101,188,826 		JBrowse link
G Bap1 Brca1 associated protein 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:24185509 PMID:25231345 NCBI chr14:30,973,358...30,981,887
Ensembl chr14:30,973,407...30,981,901 		JBrowse link
G Birc6 baculoviral IAP repeat-containing 6 ameliorates ISO mRNA:increased expression:bile duct (human) RGD PMID:31964418 RGD:153344516 NCBI chr17:74,835,247...75,010,351
Ensembl chr17:74,835,290...75,010,351 		JBrowse link
G Braf Braf transforming gene IAGP DNA:missense mutation:cds:p.V600E (human) RGD PMID:12692057 RGD:11073239 NCBI chr 6:39,580,171...39,702,592
Ensembl chr 6:39,580,171...39,702,397 		JBrowse link
G Cdkn2a cyclin dependent kinase inhibitor 2A onset ISO protein:decreased expression:liver RGD PMID:15619210 RGD:2317417 NCBI chr 4:89,192,710...89,212,856
Ensembl chr 4:89,192,708...89,212,890 		JBrowse link
G Cxcl15 C-X-C motif chemokine ligand 15 ISO ClinVar Annotator: match by term: Cholangiocarcinoma ClinVar PMID:18550579 NCBI chr 5:90,942,393...90,950,926
Ensembl chr 5:90,942,393...90,950,926 		JBrowse link
G Cxcr1 C-X-C motif chemokine receptor 1 ISO ClinVar Annotator: match by term: Cholangiocarcinoma ClinVar PMID:18550579 NCBI chr 1:74,228,862...74,233,867
Ensembl chr 1:74,230,944...74,233,790 		JBrowse link
G Cycs cytochrome c, somatic ISO RGD PMID:19788692 RGD:2317615 NCBI chr 6:50,539,543...50,543,549
Ensembl chr 6:50,539,543...50,543,518 		JBrowse link
G Cyp24a1 cytochrome P450, family 24, subfamily a, polypeptide 1 ISO protein:increased expression:intrahepatic bile, extrahepatic bile duct (human) RGD PMID:23375797 RGD:151361187 NCBI chr 2:170,324,877...170,339,065
Ensembl chr 2:170,324,628...170,339,065 		JBrowse link
G Egf epidermal growth factor ISO ClinVar Annotator: match by term: Cholangiocarcinoma ClinVar PMID:18550579 PMID:25741868 PMID:28492532 NCBI chr 3:129,471,223...129,548,971
Ensembl chr 3:129,471,214...129,548,965 		JBrowse link
G Egfr epidermal growth factor receptor ISO CTD Direct Evidence: therapeutic
ClinVar Annotator: match by term: Cholangiocarcinoma 		CTD
ClinVar		 PMID:17341899 PMID:18550579 PMID:24728327 PMID:25741868 PMID:28492532 NCBI chr11:16,700,153...16,868,158
Ensembl chr11:16,702,203...16,868,158 		JBrowse link
G Epo erythropoietin ISO mRNA, protein:increased expression:liver RGD PMID:23052842 RGD:10400912 NCBI chr 5:137,481,282...137,484,078
Ensembl chr 5:137,481,282...137,531,504 		JBrowse link
G Epor erythropoietin receptor ISO mRNA, protein:increased expression:liver RGD PMID:23052842 RGD:10400912 NCBI chr 9:21,870,193...21,874,915
Ensembl chr 9:21,870,193...21,874,802 		JBrowse link
G Erbb2 erb-b2 receptor tyrosine kinase 2 ISO CTD Direct Evidence: marker/mechanism CTD PMID:16818635 NCBI chr11:98,303,310...98,328,542
Ensembl chr11:98,303,296...98,328,542 		JBrowse link
G Ezh2 enhancer of zeste 2 polycomb repressive complex 2 subunit disease_progression
no_association 		ISO DNA:SNP: :g.148505302C>T (rs887569) (human)
DNA:SNPs: :g.148525904C>G, (rs2302427), g.148519011C>T (rs6464926), g.148517456T>G (rs17171119) (human) 		RGD PMID:24179546 PMID:24179546 RGD:126779604, RGD:126779604 NCBI chr 6:47,507,208...47,613,843
Ensembl chr 6:47,507,073...47,572,275 		JBrowse link
G Fasl Fas ligand ISO RGD PMID:11029528 RGD:2317746 NCBI chr 1:161,608,260...161,616,064
Ensembl chr 1:161,608,258...161,616,064 		JBrowse link
G Fgf2 fibroblast growth factor 2 ISO protein:increased expression:bile RGD PMID:11478488 RGD:2317765 NCBI chr 3:37,402,616...37,464,255
Ensembl chr 3:37,402,495...37,464,257 		JBrowse link
G Fgfr2 fibroblast growth factor receptor 2 ISO CTD Direct Evidence: marker/mechanism CTD PMID:26258846 NCBI chr 7:129,764,181...129,868,538
Ensembl chr 7:129,764,181...132,725,079 		JBrowse link
G Fscn1 fascin actin-bundling protein 1 disease_progression ISO protein:increased expression:bile ducts RGD PMID:19721413 RGD:2317780 NCBI chr 5:142,946,110...142,958,944
Ensembl chr 5:142,946,098...142,958,940 		JBrowse link
G Gm15283 predicted gene 15283 ISO ClinVar Annotator: match by term: Cholangiocarcinoma ClinVar PMID:12919954 PMID:18550579 PMID:22647679 PMID:24120591 PMID:25741868 NCBI chr12:73,981,498...73,999,213
Ensembl chr12:73,889,811...73,996,735 		JBrowse link
G Gnas GNAS complex locus disease_progression ISO DNA:polymorphism:393T>C (human)
CTD Direct Evidence: marker/mechanism 		CTD
RGD		 PMID:22561520 PMID:17356712 RGD:1601377 NCBI chr 2:174,126,113...174,188,537
Ensembl chr 2:174,126,113...174,188,537 		JBrowse link
G Gstm1 glutathione S-transferase, mu 1 ISO RGD PMID:24049014 RGD:14700980 NCBI chr 3:107,919,566...107,925,289
Ensembl chr 3:107,919,571...107,925,289 		JBrowse link
G Gstp1 glutathione S-transferase, pi 1 treatment ISO DNA:hypermethylation:promoter
human cell line in a mouse model 		RGD PMID:15467712 PMID:12805482 RGD:2317198, RGD:14401711 NCBI chr19:4,085,411...4,087,912
Ensembl chr19:4,085,407...4,087,985 		JBrowse link
G Hdac6 histone deacetylase 6 ISO protein:increased expression:liver: RGD PMID:23370327 RGD:9681560 NCBI chr  X:7,796,355...7,814,284
Ensembl chr  X:7,796,359...7,814,128 		JBrowse link
G Hgf hepatocyte growth factor ISO mRNA, protein:increased expression: :
protein:increased expression:serum 		RGD PMID:10827151 PMID:16974053 RGD:2317925, RGD:2317909 NCBI chr 5:16,758,493...16,827,448
Ensembl chr 5:16,758,493...16,825,150 		JBrowse link
G Hif1a hypoxia inducible factor 1, alpha subunit ISO ClinVar Annotator: match by term: Cholangiocarcinoma ClinVar PMID:12919954 PMID:18550579 PMID:22647679 PMID:24120591 PMID:25741868 NCBI chr12:73,948,186...73,994,304
Ensembl chr12:73,948,149...73,994,304 		JBrowse link
G Hnf1b HNF1 homeobox B ISO CTD Direct Evidence: marker/mechanism CTD PMID:39887605 NCBI chr11:83,741,035...83,796,743
Ensembl chr11:83,740,889...83,796,645 		JBrowse link
G Idh1 isocitrate dehydrogenase 1 (NADP+), soluble ISO CTD Direct Evidence: marker/mechanism CTD PMID:24185509 NCBI chr 1:65,197,775...65,225,638
Ensembl chr 1:65,197,775...65,225,659 		JBrowse link
G Idh2 isocitrate dehydrogenase 2 (NADP+), mitochondrial ISO CTD Direct Evidence: marker/mechanism CTD PMID:24185509 NCBI chr 7:79,744,594...79,768,356
Ensembl chr 7:79,744,594...79,765,140 		JBrowse link
G Il10 interleukin 10 ISO ClinVar Annotator: match by term: Cholangiocarcinoma ClinVar PMID:11121048 PMID:14657422 PMID:14657427 PMID:18550579 PMID:25741868 More... NCBI chr 1:130,947,459...130,952,707
Ensembl chr 1:130,947,582...130,952,711 		JBrowse link
G Il19 interleukin 19 ISO ClinVar Annotator: match by term: Cholangiocarcinoma ClinVar PMID:11121048 PMID:14657422 PMID:14657427 PMID:18550579 PMID:25741868 More... NCBI chr 1:130,860,393...130,873,194
Ensembl chr 1:130,860,393...130,867,852 		JBrowse link
G Il1b interleukin 1 beta ISO ClinVar Annotator: match by term: Cholangiocarcinoma ClinVar PMID:18550579 NCBI chr 2:129,206,490...129,213,059
Ensembl chr 2:129,206,490...129,213,059 		JBrowse link
G Il1r2 interleukin 1 receptor, type II disease_progression ISO mRNA:altered expression:liver (human) RGD PMID:31687280 RGD:152998978 NCBI chr 1:40,123,872...40,164,390
Ensembl chr 1:40,113,239...40,164,391 		JBrowse link
G Il4ra interleukin 4 receptor, alpha ISO mRNA:increased expression:bile duct RGD PMID:18798553 RGD:2317263 NCBI chr 7:125,151,443...125,178,646
Ensembl chr 7:125,151,292...125,178,646 		JBrowse link
G Il6 interleukin 6 ISO ClinVar Annotator: match by term: Cholangiocarcinoma
protein:increased expression:serum
CTD Direct Evidence: marker/mechanism 		ClinVar
CTD
RGD		 PMID:9769329 PMID:10720087 PMID:11001912 PMID:11889177 PMID:12519862 More... RGD:2317167, RGD:14975292 NCBI chr 5:30,218,112...30,224,973
Ensembl chr 5:30,218,112...30,224,979 		JBrowse link
G Ins2 insulin II disease_progression ISO mRNA:altered expression:liver (human) RGD PMID:31687280 RGD:152998978 NCBI chr 7:142,232,393...142,233,463
Ensembl chr 7:142,232,393...142,297,118 		JBrowse link
G Kcnd2 potassium voltage-gated channel, Shal-related family, member 2 ISO CTD Direct Evidence: marker/mechanism CTD PMID:34418280 NCBI chr 6:21,212,101...21,729,804
Ensembl chr 6:21,215,502...21,729,804 		JBrowse link
G Kit KIT proto-oncogene receptor tyrosine kinase disease_progression ISO mRNA:altered expression:liver (human) RGD PMID:31687280 RGD:152998978 NCBI chr 5:75,735,647...75,817,382
Ensembl chr 5:75,735,576...75,817,382 		JBrowse link
G Kmt2c lysine (K)-specific methyltransferase 2C ISO CTD Direct Evidence: marker/mechanism CTD PMID:22561520 NCBI chr 5:25,476,793...25,703,853
Ensembl chr 5:25,476,796...25,703,781 		JBrowse link
G Kras Kirsten rat sarcoma viral oncogene homolog ISO CTD Direct Evidence: marker/mechanism CTD PMID:8968066 PMID:22561520 NCBI chr 6:145,162,425...145,197,631
Ensembl chr 6:145,162,425...145,195,965 		JBrowse link
G Krt7 keratin 7 ISO RGD PMID:18393293 RGD:2317308 NCBI chr15:101,310,284...101,325,687
Ensembl chr15:101,308,924...101,328,194 		JBrowse link
G Mdm2 transformed mouse 3T3 cell double minute 2 disease_progression ISO protein:increased expression:intrahepatic bile duct (human) RGD PMID:15619210 RGD:2317417 NCBI chr10:117,524,780...117,546,663
Ensembl chr10:117,524,780...117,546,663 		JBrowse link
G Met met proto-oncogene disease_progression ISO protein:increased phosphorylation:liver, carcinoma (human)
protein:increased expression:liver, biliary epithelium (rat) 		RGD PMID:16818635 PMID:14656942 RGD:2317578, RGD:2317601 NCBI chr 6:17,463,351...17,573,979
Ensembl chr 6:17,463,799...17,573,979 		JBrowse link
G Mfsd4a major facilitator superfamily domain containing 4A disease_progression ISO mRNA:altered expression:liver (human) RGD PMID:31687280 RGD:152998978 NCBI chr 1:131,947,543...131,997,400
Ensembl chr 1:131,950,544...131,995,800 		JBrowse link
G Mgmt O-6-methylguanine-DNA methyltransferase ISO DNA:hypermethylation:promoter (human) RGD PMID:17550320 RGD:2317632 NCBI chr 7:136,496,315...136,732,001
Ensembl chr 7:136,496,343...136,731,995 		JBrowse link
G Mir155 microRNA 155 ISO miRNA:increased expression:serum RGD PMID:30653586 RGD:21081530 NCBI chr16:84,511,028...84,511,092
Ensembl chr16:84,511,028...84,511,092 		JBrowse link
G Mir192 microRNA 192 ISO RNA:increased expression:urine RGD PMID:26456596 RGD:41404678 NCBI chr19:6,314,874...6,314,962
Ensembl chr19:6,314,874...6,314,962 		JBrowse link
G Mir21a microRNA 21a ISO RNA:increased expression:urine RGD PMID:26456596 RGD:41404678 NCBI chr11:86,474,893...86,474,984
Ensembl chr11:86,474,893...86,474,984 		JBrowse link
G Mir23b microRNA 23b ISO CTD Direct Evidence: marker/mechanism CTD PMID:34418280 NCBI chr13:63,448,298...63,448,371
Ensembl chr13:63,448,298...63,448,371 		JBrowse link
G Mir494 microRNA 494 severity
exacerbates 		ISO RGD PMID:30314946 PMID:30314946 RGD:156420141, RGD:156420141 NCBI chr12:109,681,752...109,681,836
Ensembl chr12:109,681,752...109,681,836 		JBrowse link
G Mki67 antigen identified by monoclonal antibody Ki 67 disease_progression ISO RGD PMID:12903495 RGD:2317705 NCBI chr 7:135,291,513...135,318,286
Ensembl chr 7:135,291,513...135,318,090 		JBrowse link
G Mmp2 matrix metallopeptidase 2 disease_progression ISO protein:increased expression:bile duct RGD PMID:15213623 PMID:19629755 RGD:2324667, RGD:2325769 NCBI chr 8:93,553,920...93,580,049
Ensembl chr 8:93,553,919...93,580,048 		JBrowse link
G Mmp9 matrix metallopeptidase 9 ISO mRNA:increased expression:bile duct
protein:increased expression:bile duct 		RGD PMID:16463672 PMID:15213623 PMID:15213623 RGD:2325856, RGD:2324667, RGD:2324667 NCBI chr 2:164,782,246...164,797,770
Ensembl chr 2:164,782,700...164,797,770 		JBrowse link
G Msln mesothelin ISO CTD Direct Evidence: marker/mechanism CTD PMID:14576474 NCBI chr17:25,967,587...25,973,352
Ensembl chr17:25,967,587...25,973,352 		JBrowse link
G Mthfr methylenetetrahydrofolate reductase susceptibility ISO DNA:polymorphism (human) RGD PMID:17201138 RGD:2317119 NCBI chr 4:148,123,534...148,144,019
Ensembl chr 4:148,123,534...148,144,008 		JBrowse link
G Muc1 mucin 1, transmembrane disease_progression ISO protein:increased secretion:bile
mRNA:increased expression:bile duct
protein:increased expression:bile duct:
protein:increased expression:serum 		RGD PMID:19055478 PMID:18081149 PMID:15213623 PMID:19260467 PMID:19639217 RGD:2324622, RGD:2324638, RGD:2324667, RGD:2324664, RGD:2317986 NCBI chr 3:89,136,363...89,140,688
Ensembl chr 3:89,136,364...89,140,688 		JBrowse link
G Muc16 mucin 16 ISO associated with Opisthorchiasis;protein:increased expression:serum RGD PMID:1653472 RGD:2325142 NCBI chr 9:18,406,741...18,586,117
Ensembl chr 9:18,406,751...18,585,826 		JBrowse link
G Muc2 mucin 2 ISO mRNA:decreased expression:bile duct RGD PMID:11680592 RGD:2324948 NCBI chr 7:141,276,583...141,308,428
Ensembl chr 7:141,276,583...141,308,430 		JBrowse link
G Muc3a mucin 3A, cell surface associated ISO mRNA:decreased expression:bile duct RGD PMID:11680592 RGD:2324948 NCBI chr 5:137,243,263...137,276,564
Ensembl chr 5:137,243,270...137,246,852 		JBrowse link
G Muc4 mucin 4 disease_progression ISO protein:increased expression:bile duct RGD PMID:14752841 PMID:19082442 RGD:2324944, RGD:2303602 NCBI chr16:32,555,089...32,602,786
Ensembl chr16:32,555,015...32,602,754 		JBrowse link
G Muc5ac mucin 5, subtypes A and C, tracheobronchial/gastric disease_progression ISO mRNA:increased expression:bile duct
protein:increased expression:serum 		RGD PMID:11680592 PMID:14508831 RGD:2324948, RGD:2324990 NCBI chr 7:141,342,695...141,372,964
Ensembl chr 7:141,342,709...141,372,968 		JBrowse link
G Muc5b mucin 5, subtype B, tracheobronchial ISO mRNA:decreased expression:bile duct RGD PMID:11680592 RGD:2324948 NCBI chr 7:141,392,796...141,426,826
Ensembl chr 7:141,392,807...141,426,821 		JBrowse link
G Muc6 mucin 6, gastric ISO protein:increased expression: : RGD PMID:10209489 RGD:2325167 NCBI chr 7:141,212,404...141,241,659
Ensembl chr 7:141,213,373...141,241,641 		JBrowse link
G Nat2 N-acetyltransferase 2 (arylamine N-acetyltransferase) ISO DNA:polymorphisms (human) RGD PMID:15901993 RGD:2317172 NCBI chr 8:67,947,527...67,955,296
Ensembl chr 8:67,947,510...67,955,236 		JBrowse link
G Ncam1 neural cell adhesion molecule 1 ISO associated with hepatitis RGD PMID:12031086 RGD:2326079 NCBI chr 9:49,413,434...49,710,909
Ensembl chr 9:49,413,436...49,710,225 		JBrowse link
G Nos2 nitric oxide synthase 2, inducible ISO protein:increased expression:bile duct
CTD Direct Evidence: marker/mechanism 		CTD
RGD		 PMID:16818635 PMID:16094703 RGD:2325280 NCBI chr11:78,811,613...78,851,052
Ensembl chr11:78,811,613...78,851,080 		JBrowse link
G Notch1 notch 1 ISO protein:increased expression:cholangiocyte RGD PMID:15887117 RGD:2325330 NCBI chr 2:26,347,914...26,393,834
Ensembl chr 2:26,347,915...26,406,675 		JBrowse link
G Nr1h4 nuclear receptor subfamily 1, group H, member 4 disease_progression ISO mRNA:decreased expression:liver (rat) RGD PMID:24255171 RGD:15090822 NCBI chr10:89,290,096...89,369,484
Ensembl chr10:89,290,096...89,369,447 		JBrowse link
G Ogg1 8-oxoguanine DNA-glycosylase 1 disease_progression ISO DNA:loss of heterozygosity (human) RGD PMID:11866974 PMID:11260864 RGD:2317134, RGD:2317136 NCBI chr 6:113,303,959...113,311,149
Ensembl chr 6:113,303,933...113,312,029 		JBrowse link
G Osbp2 oxysterol binding protein 2 ISO mRNA:increased expression:blood RGD PMID:21763455 RGD:41404644 NCBI chr11:3,653,731...3,814,000
Ensembl chr11:3,653,731...3,813,903 		JBrowse link
G Osbpl7 oxysterol binding protein-like 7 ISO mRNA:increased expression:blood RGD PMID:21763455 RGD:41404644 NCBI chr11:96,941,459...96,959,730
Ensembl chr11:96,941,454...96,959,730 		JBrowse link
G Panx2 pannexin 2 disease_progression ISO mRNA:altered expression:liver (human) RGD PMID:31687280 RGD:152998978 NCBI chr15:88,941,797...88,957,769
Ensembl chr15:88,943,937...88,957,770 		JBrowse link
G Pawr PRKC, apoptosis, WT1, regulator ISO mRNA,protein:decreased expression:cholangiocyte: RGD PMID:20724592 RGD:9835357 NCBI chr10:108,168,050...108,250,708
Ensembl chr10:108,167,982...108,250,101 		JBrowse link
G Pbrm1 polybromo 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:24185509 NCBI chr14:30,741,095...30,843,549
Ensembl chr14:30,741,095...30,843,549 		JBrowse link
G Peg3 paternally expressed 3 ISO CTD Direct Evidence: marker/mechanism CTD PMID:22561520 NCBI chr 7:6,706,891...6,733,443
Ensembl chr 7:6,706,891...6,733,430 		JBrowse link
G Pes1 pescadillo ribosomal biogenesis factor 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:34845814 NCBI chr11:3,913,975...3,930,004
Ensembl chr11:3,913,975...3,930,004 		JBrowse link
G Pir pirin disease_progression ISO mRNA:altered expression:liver (human) RGD PMID:31687280 RGD:152998978 NCBI chr  X:163,052,427...163,156,009
Ensembl chr  X:163,052,367...163,156,007 		JBrowse link
G Ppia peptidylprolyl isomerase A ameliorates ISO human cell line and construct in a mouse model RGD PMID:21871105 RGD:150429623 NCBI chr11:6,365,867...6,369,817
Ensembl chr11:6,365,443...6,369,817 		JBrowse link
G Ppp3ca protein phosphatase 3, catalytic subunit, alpha isoform disease_progression ISO mRNA:altered expression:liver (human) RGD PMID:31687280 RGD:152998978 NCBI chr 3:136,375,778...136,643,488
Ensembl chr 3:136,375,885...136,643,488 		JBrowse link
G Prex2 phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 2 sexual_dimorphism ISO DNA:substitutions, insertion/deletions: (human) RGD PMID:28000796 RGD:151665188 NCBI chr 1:11,063,496...11,373,907
Ensembl chr 1:11,063,689...11,373,905 		JBrowse link
G Prkaca protein kinase, cAMP dependent, catalytic, alpha ISO CTD Direct Evidence: marker/mechanism CTD PMID:26258846 NCBI chr 8:84,699,607...84,723,073
Ensembl chr 8:84,699,622...84,723,072 		JBrowse link
G Prkacb protein kinase, cAMP dependent, catalytic, beta ISO CTD Direct Evidence: marker/mechanism CTD PMID:26258846 NCBI chr 3:146,435,334...146,518,691
Ensembl chr 3:146,435,329...146,518,745 		JBrowse link
G Prrg4 proline rich Gla (G-carboxyglutamic acid) 4 (transmembrane) disease_progression ISO mRNA:altered expression:liver (human) RGD PMID:31687280 RGD:152998978 NCBI chr 2:104,657,374...104,680,216
Ensembl chr 2:104,661,086...104,680,221 		JBrowse link
G Prss2 serine protease 2 ISO protein:increased expression:serum RGD PMID:8621252 RGD:2324908 NCBI chr 6:41,498,710...41,502,013
Ensembl chr 6:41,498,721...41,502,013 		JBrowse link
G Prss56 serine protease 56 disease_progression ISO mRNA:altered expression:liver (human) RGD PMID:31687280 RGD:152998978 NCBI chr 1:87,111,002...87,116,127
Ensembl chr 1:87,111,035...87,116,127 		JBrowse link
G Pten phosphatase and tensin homolog ISO
IMP 		CTD Direct Evidence: marker/mechanism CTD
RGD		 PMID:27022031 PMID:23376645 RGD:12802341 NCBI chr19:32,734,977...32,803,560
Ensembl chr19:32,734,897...32,803,560 		JBrowse link
G Ptgs2 prostaglandin-endoperoxide synthase 2 ISO protein:increased expression:bile duct
ClinVar Annotator: match by term: Cholangiocarcinoma
CTD Direct Evidence: marker/mechanism 		ClinVar
CTD
RGD		 PMID:16818635 PMID:19621664 RGD:2317180 NCBI chr 1:149,975,851...149,983,978
Ensembl chr 1:149,975,782...149,983,978 		JBrowse link
G Rassf8 Ras association (RalGDS/AF-6) domain family (N-terminal) member 8 disease_progression ISO mRNA:altered expression:liver (human) RGD PMID:31687280 RGD:152998978 NCBI chr 6:145,692,292...145,766,805
Ensembl chr 6:145,692,474...145,766,805 		JBrowse link
G Reg1 regenerating islet-derived 1 susceptibility ISO mRNA, protein:increased expression:liver (human) RGD PMID:11343228 RGD:10044031 NCBI chr 6:78,402,966...78,405,651
Ensembl chr 6:78,399,694...78,405,650 		JBrowse link
G Rnf39 ring finger protein 39 disease_progression ISO mRNA:altered expression:liver (human) RGD PMID:31687280 RGD:152998978 NCBI chr17:37,253,943...37,258,878
Ensembl chr17:37,253,810...37,258,878 		JBrowse link
G Rnf43 ring finger protein 43 exacerbates ISO CTD Direct Evidence: marker/mechanism
associated with opisthorchiasis;DNA:SNPs:multiple: (human) 		CTD
RGD		 PMID:22561520 PMID:22561520 RGD:151361227 NCBI chr11:87,553,913...87,626,365
Ensembl chr11:87,553,548...87,626,365 		JBrowse link
G Robo2 roundabout guidance receptor 2 ISO CTD Direct Evidence: marker/mechanism CTD PMID:22561520 NCBI chr16:73,688,725...75,244,331
Ensembl chr16:73,688,727...74,889,765 		JBrowse link
G Runx3 runt related transcription factor 3 ISO protein:decreased expression:bile duct RGD PMID:19827872 RGD:2324955 NCBI chr 4:134,847,956...134,905,301
Ensembl chr 4:134,847,963...134,905,301 		JBrowse link
G Slc4a4 solute carrier family 4 (anion exchanger), member 4 disease_progression ISO mRNA:altered expression:liver (human) RGD PMID:31687280 RGD:152998978 NCBI chr 5:88,941,717...89,387,515
Ensembl chr 5:89,034,345...89,387,512 		JBrowse link
G Slc5a5 solute carrier family 5 (sodium iodide symporter), member 5 ISO CTD Direct Evidence: marker/mechanism CTD PMID:17408651 NCBI chr 8:71,335,529...71,345,429
Ensembl chr 8:71,335,533...71,345,401 		JBrowse link
G Slc7a5 solute carrier family 7 (cationic amino acid transporter, y+ system), member 5 disease_progression
treatment 		ISO RGD PMID:25475870 PMID:28347255 PMID:24131658 RGD:151361214, RGD:151361294, RGD:151361287 NCBI chr 8:122,607,885...122,634,425
Ensembl chr 8:122,607,889...122,634,433 		JBrowse link
G Smad4 SMAD family member 4 ISO CTD Direct Evidence: marker/mechanism CTD PMID:22561520 NCBI chr18:73,767,861...73,836,862
Ensembl chr18:73,772,080...73,836,851 		JBrowse link
G Socs3 suppressor of cytokine signaling 3 severity ISO protein:decreased expression:bile duct (human) RGD PMID:26485275 RGD:11250478 NCBI chr11:117,856,905...117,860,192
Ensembl chr11:117,856,905...117,860,873 		JBrowse link
G Sox17 SRY (sex determining region Y)-box 17 severity ISO RGD PMID:20816680 RGD:4889598 NCBI chr 1:4,561,154...4,567,624
Ensembl chr 1:4,561,154...4,567,577 		JBrowse link
G Sox2 SRY (sex determining region Y)-box 2 disease_progression ISO mRNA:altered expression:liver (human) RGD PMID:31687280 RGD:152998978 NCBI chr 3:34,704,144...34,706,610
Ensembl chr 3:34,704,554...34,706,610 		JBrowse link
G Tgfb1 transforming growth factor, beta 1 disease_progression ISO protein:increased expression:pancreas RGD PMID:16083599 PMID:12632524 RGD:2325020, RGD:1299231 NCBI chr 7:25,386,406...25,404,503
Ensembl chr 7:25,386,427...25,404,502 		JBrowse link
G Tgfbr2 transforming growth factor, beta receptor II ISO mRNA:increased expression:bile duct RGD PMID:12632524 RGD:1299231 NCBI chr 9:115,916,763...116,004,431
Ensembl chr 9:115,913,361...116,004,428 		JBrowse link
G Thbs1 thrombospondin 1 disease_progression ISO DNA:hypermethylation (human) RGD PMID:11927969 PMID:12213730 PMID:16465407 RGD:2325027, RGD:2325026, RGD:2325024 NCBI chr 2:117,942,357...117,957,614
Ensembl chr 2:117,942,357...117,957,614 		JBrowse link
G Tnc tenascin C severity ISO RGD PMID:20816680 RGD:4889598 NCBI chr 4:63,878,022...63,965,554
Ensembl chr 4:63,878,022...63,965,252 		JBrowse link
G Tnfaip3 tumor necrosis factor, alpha-induced protein 3 severity ISO protein:increased expression:bile duct (human) RGD PMID:26485275 RGD:11250478 NCBI chr10:18,876,658...18,891,158
Ensembl chr10:18,876,658...18,891,405 		JBrowse link
G Trp53 transformation related protein 53 ISO
EXP 		CTD Direct Evidence: marker/mechanism CTD PMID:16818635 PMID:22561520 NCBI chr11:69,471,174...69,482,699
Ensembl chr11:69,471,185...69,482,699 		JBrowse link
G Ttr transthyretin ISO protein:decreased expression:blood serum (human) RGD PMID:18275060 RGD:151660506 NCBI chr18:20,797,266...20,807,383
Ensembl chr18:20,798,337...20,807,378 		JBrowse link
G Ugt1a9 UDP glucuronosyltransferase 1 family, polypeptide A9 ISO RGD PMID:9230212 RGD:2325161 NCBI chr 1:87,998,501...88,147,724
Ensembl chr 1:87,998,522...88,146,719 		JBrowse link
G Vegfa vascular endothelial growth factor A ISO ClinVar Annotator: match by term: Cholangiocarcinoma ClinVar PMID:18550579 NCBI chr17:46,327,919...46,343,303
Ensembl chr17:46,327,919...46,343,295 		JBrowse link
G Wdhd1 WD repeat and HMG-box DNA binding protein 1 ameliorates ISO RGD PMID:30314946 RGD:156420141 NCBI chr14:47,478,401...47,514,352
Ensembl chr14:47,478,401...47,514,314 		JBrowse link
G Wnt9a wingless-type MMTV integration site family, member 9A disease_progression ISO mRNA:altered expression:liver (human) RGD PMID:31687280 RGD:152998978 NCBI chr11:59,197,675...59,224,378
Ensembl chr11:59,197,754...59,224,378 		JBrowse link
extrahepatic bile duct adenocarcinoma term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bap1 Brca1 associated protein 1 disease_progression ISO RGD PMID:25536104 RGD:150340631 NCBI chr14:30,973,358...30,981,887
Ensembl chr14:30,973,407...30,981,901 		JBrowse link
G Pbrm1 polybromo 1 disease_progression ISO RGD PMID:25536104 RGD:150340631 NCBI chr14:30,741,095...30,843,549
Ensembl chr14:30,741,095...30,843,549 		JBrowse link
G Rac1 Rac family small GTPase 1 ISO protein:increased expression:mucosa (human) RGD PMID:21537609 RGD:153350126 NCBI chr 5:143,491,236...143,513,786
Ensembl chr 5:143,489,389...143,513,791 		JBrowse link
G Slc7a5 solute carrier family 7 (cationic amino acid transporter, y+ system), member 5 disease_progression ISO RGD PMID:24890221 RGD:151361210 NCBI chr 8:122,607,885...122,634,425
Ensembl chr 8:122,607,889...122,634,433 		JBrowse link
extrahepatic bile duct carcinoma term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pkd1 polycystin 1, transient receptor potential channel interacting ISO ClinVar Annotator: match by term: Extrahepatic bile duct cancer ClinVar PMID:25741868 NCBI chr17:24,767,657...24,815,457
Ensembl chr17:24,768,808...24,815,482 		JBrowse link
G Pold1 polymerase (DNA directed), delta 1, catalytic subunit ISO ClinVar Annotator: match by term: Extrahepatic bile duct cancer ClinVar PMID:25741868 PMID:26467025 PMID:28492532 NCBI chr 7:44,182,168...44,198,239
Ensembl chr 7:44,182,170...44,198,273 		JBrowse link
G Xpo1 exportin 1 disease_progression ISO protein:increased expression:extrahepatic bile duct (human) RGD PMID:27279267 RGD:151665800 NCBI chr11:23,205,768...23,248,250
Ensembl chr11:23,206,055...23,248,249 		JBrowse link
fibrolamellar carcinoma term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Car12 carbonic anhydrase 12 ISO mRNA:increased expression:liver RGD PMID:28304380 RGD:153352326 NCBI chr 9:66,619,026...66,674,127
Ensembl chr 9:66,620,968...66,674,127 		JBrowse link
G Ctnnb1 catenin beta 1 ISO protein:increased tyrosine phosphorylation:exon: RGD PMID:19101982 RGD:14402052 NCBI chr 9:120,762,466...120,789,573
Ensembl chr 9:120,758,282...120,789,573 		JBrowse link
G Fgfr1 fibroblast growth factor receptor 1 ISO protein:increased expression:liver: RGD PMID:24925055 RGD:11055933 NCBI chr 8:26,008,808...26,067,819
Ensembl chr 8:26,003,670...26,065,734 		JBrowse link
G Prkaca protein kinase, cAMP dependent, catalytic, alpha ISO mRNA,protein:increased expression:liver (human) RGD PMID:27027723 RGD:151347845 NCBI chr 8:84,699,607...84,723,073
Ensembl chr 8:84,699,622...84,723,072 		JBrowse link
gallbladder adenocarcinoma term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ace angiotensin I converting enzyme ISO DNA:polymorphism: :rs4646994 (human) RGD PMID:20438364 RGD:2325207 NCBI chr11:105,858,774...105,880,790
Ensembl chr11:105,858,771...105,880,790 		JBrowse link
G Cdk1 cyclin dependent kinase 1 ISO protein:increased expression:gallbladder RGD PMID:15017593 RGD:2722465 NCBI chr10:69,170,976...69,188,742
Ensembl chr10:69,170,976...69,188,768 		JBrowse link
G Ddr2 discoidin domain receptor family, member 2 disease_progression ISO RGD PMID:29043607 RGD:150429712 NCBI chr 1:169,799,874...169,938,525
Ensembl chr 1:169,799,876...169,938,331 		JBrowse link
G Ifitm1 interferon induced transmembrane protein 1 disease_progression ISO RGD PMID:29043607 RGD:150429712 NCBI chr 7:140,547,342...140,549,740
Ensembl chr 7:140,547,134...140,549,738 		JBrowse link
gallbladder cancer term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apc APC, WNT signaling pathway regulator disease_progression ISO DNA:SNP::rs11954856(human) RGD PMID:26715268 RGD:151356500 NCBI chr18:34,353,350...34,455,243
Ensembl chr18:34,353,977...34,455,605 		JBrowse link
G Apob apolipoprotein B susceptibility ISO DNA:SNP: :rs693 (human) RGD PMID:20082485 PMID:17696941 RGD:2325761, RGD:2325764 NCBI chr12:8,027,629...8,066,839
Ensembl chr12:8,027,648...8,066,835 		JBrowse link
G Apoe apolipoprotein E susceptibility ISO DNA:SNP:intron:rs440446 (human) RGD PMID:18296645 RGD:2317550 NCBI chr 7:19,430,169...19,434,326
Ensembl chr 7:19,430,034...19,433,113 		JBrowse link
G Axin2 axin 2 disease_progression ISO DNA:SNP::s4791171(human) RGD PMID:26715268 RGD:151356500 NCBI chr11:108,808,687...108,841,609
Ensembl chr11:108,811,175...108,841,609 		JBrowse link
G Braf Braf transforming gene ISO ClinVar Annotator: match by term: Gallbladder cancer ClinVar NCBI chr 6:39,580,171...39,702,592
Ensembl chr 6:39,580,171...39,702,397 		JBrowse link
G Bub1b BUB1B, mitotic checkpoint serine/threonine kinase ISO mRNA:increased expression:gallbladder RGD PMID:18497548 RGD:2324871 NCBI chr 2:118,428,684...118,472,073
Ensembl chr 2:118,428,692...118,472,072 		JBrowse link
G Calr calreticulin exacerbates ISO mRNA, protein:increased expression:gall bladder (human) RGD PMID:33591948 RGD:150521682 NCBI chr 8:85,568,717...85,573,560
Ensembl chr 8:85,568,479...85,573,563 		JBrowse link
G Ccr5 C-C motif chemokine receptor 5 onset ISO DNA:frameshift mutation:cds:p.S185_T195del rs333 (human) RGD PMID:18405329 RGD:2317570 NCBI chr 9:123,921,557...123,934,153
Ensembl chr 9:123,921,580...123,947,736 		JBrowse link
G Ctnnb1 catenin beta 1 ISO ClinVar Annotator: match by term: Gallbladder cancer ClinVar PMID:10435629 PMID:26822237 NCBI chr 9:120,762,466...120,789,573
Ensembl chr 9:120,758,282...120,789,573 		JBrowse link
G Cyp17a1 cytochrome P450, family 17, subfamily a, polypeptide 1 susceptibility ISO DNA:transition:5' utr:-34T>C rs743572 (human) RGD PMID:16381022 RGD:2317619 NCBI chr19:46,655,604...46,661,439
Ensembl chr19:46,655,604...46,661,611 		JBrowse link
G Cyp1a1 cytochrome P450, family 1, subfamily a, polypeptide 1 ISO DNA:polymorphism: :p.I462V (human)
DNA:transition: :6235T>C (human) 		RGD PMID:18990008 PMID:18287863 RGD:2317211, RGD:2317212 NCBI chr 9:57,595,211...57,611,107
Ensembl chr 9:57,595,211...57,611,107 		JBrowse link
G Dpyd dihydropyrimidine dehydrogenase disease_progression ISO RGD PMID:16619549 RGD:2317631 NCBI chr 3:118,355,758...119,226,573
Ensembl chr 3:118,355,778...119,226,573 		JBrowse link
G Egf epidermal growth factor susceptibility ISO DNA:SNP: :+61A>G (rs4444903)(human) RGD PMID:8093356 PMID:18571008 RGD:2317646, RGD:2317641 NCBI chr 3:129,471,223...129,548,971
Ensembl chr 3:129,471,214...129,548,965 		JBrowse link
G Gli1 GLI-Kruppel family member GLI1 disease_progression ISO DNA:SNP::rs2228226(human) RGD PMID:26715268 RGD:151356500 NCBI chr10:127,165,751...127,177,448
Ensembl chr10:127,165,751...127,177,843 		JBrowse link
G Gstm1 glutathione S-transferase, mu 1 ISO RGD PMID:26925680 RGD:14700928 NCBI chr 3:107,919,566...107,925,289
Ensembl chr 3:107,919,571...107,925,289 		JBrowse link
G Junb jun B proto-oncogene exacerbates ISO protein:increased expression:gall bladder (human) RGD PMID:26318166 RGD:11528126 NCBI chr 8:85,703,538...85,705,377
Ensembl chr 8:85,701,113...85,705,347 		JBrowse link
G Keap1 kelch-like ECH-associated protein 1 ISO DNA:missense mutations, frameshift mutations:cds:multiple (human) RGD PMID:18692501 RGD:6893398 NCBI chr 9:21,141,026...21,150,628
Ensembl chr 9:21,141,026...21,150,657 		JBrowse link
G Kras Kirsten rat sarcoma viral oncogene homolog ISO ClinVar Annotator: match by term: Gallbladder cancer ClinVar PMID:6320174 PMID:11745231 PMID:15696205 PMID:16051643 PMID:17704260 More... NCBI chr 6:145,162,425...145,197,631
Ensembl chr 6:145,162,425...145,195,965 		JBrowse link
G Lrp1b low density lipoprotein-related protein 1B ameliorates ISO DNA:mutations:multiple: (human) RGD PMID:32898339 RGD:150429787 NCBI chr 2:40,485,302...42,543,747
Ensembl chr 2:40,485,258...42,543,636 		JBrowse link
G Pik3ca phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha ISO ClinVar Annotator: match by term: Gallbladder cancer ClinVar PMID:15520168 PMID:15608678 PMID:15930273 PMID:17673550 PMID:21078999 More... NCBI chr 3:32,451,203...32,520,256
Ensembl chr 3:32,451,820...32,522,635 		JBrowse link
G Rbp4 retinol binding protein 4, plasma disease_progression ISO associated with type 2 diabetes mellitus; protein:decreased expression:blood serum (human) RGD PMID:37273108 RGD:329849105 NCBI chr19:38,105,068...38,113,769
Ensembl chr19:38,105,077...38,113,729 		JBrowse link
G Rictor RPTOR independent companion of MTOR, complex 2 ISO DNA:CNV, amplification:exon (human) RGD PMID:24508317 RGD:152995522 NCBI chr15:6,737,827...6,829,882
Ensembl chr15:6,737,860...6,829,882 		JBrowse link
G Smad4 SMAD family member 4 ISO ClinVar Annotator: match by term: Gallbladder cancer ClinVar PMID:10479724 PMID:10764709 PMID:16152648 PMID:16436638 PMID:21465659 More... NCBI chr18:73,767,861...73,836,862
Ensembl chr18:73,772,080...73,836,851 		JBrowse link
G Trp53 transformation related protein 53 ISO ClinVar Annotator: match by term: Gallbladder cancer ClinVar PMID:1631137 PMID:1978757 PMID:7478555 PMID:7791795 PMID:8023157 More... NCBI chr11:69,471,174...69,482,699
Ensembl chr11:69,471,185...69,482,699 		JBrowse link
G Xrcc1 X-ray repair complementing defective repair in Chinese hamster cells 1 susceptibility ISO DNA:polymorphisms: :p.R194W, p.R399Q (human) RGD PMID:19266243 RGD:2317128 NCBI chr 7:24,246,124...24,272,863
Ensembl chr 7:24,245,714...24,272,865 		JBrowse link
gallbladder carcinoma term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abo ABO, alpha 1-3-N-acetylgalactosaminyltransferase and alpha 1-3-galactosyltransferase ISO RGD PMID:7795450 RGD:2317512 NCBI chr 2:26,732,508...26,754,973
Ensembl chr 2:26,732,515...26,754,991 		JBrowse link
G Actr3 ARP3 actin-related protein 3 severity ISO Squamous Cell/Adenosquamous Carcinoma and Adenocarcinoma;protein:increased expression:gall bladder (human) RGD PMID:23320827 RGD:11571623 NCBI chr 1:125,320,642...125,363,464
Ensembl chr 1:125,320,642...125,363,464 		JBrowse link
G Antxr1 anthrax toxin receptor 1 severity ISO RGD PMID:21545221 RGD:9684943 NCBI chr 6:87,110,835...87,312,757
Ensembl chr 6:87,110,835...87,312,803 		JBrowse link
G Birc3 baculoviral IAP repeat-containing 3 exacerbates ISO mRNA:increased expression:gall bladder (human) RGD PMID:28295868 RGD:153297817 NCBI chr 9:7,848,698...7,873,199
Ensembl chr 9:7,848,700...7,873,187 		JBrowse link
G Cfl1 cofilin 1, non-muscle severity ISO Squamous Cell/Adenosquamous Carcinoma and Adenocarcinoma;protein:increased expression:gall bladder (human) RGD PMID:23320827 RGD:11571623 NCBI chr19:5,540,483...5,544,059
Ensembl chr19:5,540,483...5,545,229 		JBrowse link
G Clptm1l CLPTM1-like susceptibility ISO DNA:SNP, haplotype: :rs401681(human) RGD PMID:29450669 RGD:150530629 NCBI chr13:73,752,121...73,768,758
Ensembl chr13:73,752,125...73,768,724 		JBrowse link
G Gpx3 glutathione peroxidase 3 severity ISO protein:decreased expression:gallbladder (human) RGD PMID:24167362 RGD:151665515 NCBI chr11:54,793,680...54,801,213
Ensembl chr11:54,793,279...54,801,203 		JBrowse link
G Il10 interleukin 10 susceptibility ISO associated with Cholelithiasis RGD PMID:19065724 RGD:2317654 NCBI chr 1:130,947,459...130,952,707
Ensembl chr 1:130,947,582...130,952,711 		JBrowse link
G Mir155 microRNA 155 disease_progression ISO miRNA:increased expression:gall bladder RGD PMID:26885061 RGD:21079444 NCBI chr16:84,511,028...84,511,092
Ensembl chr16:84,511,028...84,511,092 		JBrowse link
G Mtus1 mitochondrial tumor suppressor 1 disease_progression ISO RGD PMID:31882471 RGD:25330344 NCBI chr 8:41,443,949...41,587,318
Ensembl chr 8:41,443,951...41,586,763 		JBrowse link
G Ptch1 patched 1 disease_progression ISO RGD PMID:22407314 RGD:150523794 NCBI chr13:63,656,142...63,721,274
Ensembl chr13:63,656,142...63,721,412 		JBrowse link
G Rac1 Rac family small GTPase 1 exacerbates ISO protein:increased expression:gallbladder (human) RGD PMID:21853342 RGD:155230819 NCBI chr 5:143,491,236...143,513,786
Ensembl chr 5:143,489,389...143,513,791 		JBrowse link
G Tert telomerase reverse transcriptase susceptibility ISO DNA:SNP, haplotype: :rs2736100(human) RGD PMID:29450669 RGD:150530629 NCBI chr13:73,775,030...73,797,962
Ensembl chr13:73,775,030...73,797,962 		JBrowse link
G Tgfa transforming growth factor alpha ISO RGD PMID:9542514 RGD:2317470 NCBI chr 6:86,172,020...86,252,726
Ensembl chr 6:86,172,205...86,252,701 		JBrowse link
G Tjp1 tight junction protein 1 ISO protein:decreased expression:gallbladder RGD PMID:19184677 RGD:2325030 NCBI chr 7:64,945,913...65,177,629
Ensembl chr 7:64,945,913...65,177,529 		JBrowse link
G Tymp thymidine phosphorylase disease_progression ISO RGD PMID:18946757 RGD:2325157 NCBI chr15:89,255,834...89,261,282
Ensembl chr15:89,256,134...89,261,242 		JBrowse link
G Ubr5 ubiquitin protein ligase E3 component n-recognin 5 ameliorates ISO human cell line in a mouse model RGD PMID:30775814 RGD:151665192 NCBI chr15:37,966,421...38,084,103
Ensembl chr15:37,967,572...38,079,098 		JBrowse link
hepatoblastoma term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G 4930550C14Rik RIKEN cDNA 4930550C14 gene ISO ClinVar Annotator: match by term: Hepatoblastoma ClinVar PMID:21665257 PMID:25085752 PMID:25186627 PMID:25741868 PMID:26787654 More... NCBI chr 9:53,313,814...53,345,726
Ensembl chr 9:53,313,625...53,345,702 		JBrowse link
G Apc APC, WNT signaling pathway regulator ISO ClinVar Annotator: match by term: Hepatoblastoma ClinVar PMID:1316610 PMID:8381579 PMID:8764128 PMID:9824584 PMID:15311282 More... NCBI chr18:34,353,350...34,455,243
Ensembl chr18:34,353,977...34,455,605 		JBrowse link
G Apoa1 apolipoprotein A-I ISO mRNA, protein:decreased expression:serum (human) RGD PMID:27974108 RGD:25671440 NCBI chr 9:46,139,928...46,141,767
Ensembl chr 9:46,139,878...46,141,764 		JBrowse link
G Arid1a AT-rich interaction domain 1A ISO ClinVar Annotator: match by term: Hepatoblastoma ClinVar PMID:26822237 NCBI chr 4:133,406,319...133,484,682
Ensembl chr 4:133,406,319...133,484,080 		JBrowse link
G Atm ataxia telangiectasia mutated ISO ClinVar Annotator: match by term: Hepatoblastoma ClinVar PMID:11756177 PMID:16832357 PMID:17333338 PMID:19781682 PMID:20305132 More... NCBI chr 9:53,348,422...53,448,125
Ensembl chr 9:53,350,449...53,448,040 		JBrowse link
G Axin2 axin 2 ISO protein:increased expression:liver: RGD PMID:11809809 RGD:151356508 NCBI chr11:108,808,687...108,841,609
Ensembl chr11:108,811,175...108,841,609 		JBrowse link
G Bard1 BRCA1 associated RING domain 1 ISO ClinVar Annotator: match by term: Hepatoblastoma ClinVar PMID:25741868 PMID:26467025 PMID:26580448 PMID:28492532 PMID:35264596 More... NCBI chr 1:71,066,694...71,142,300
Ensembl chr 1:71,066,657...71,142,305 		JBrowse link
G Brca2 breast cancer 2, early onset ISO ClinVar Annotator: match by term: Hepatoblastoma ClinVar PMID:9971877 PMID:10717622 PMID:15937982 PMID:17826769 PMID:19941162 More... NCBI chr 5:150,445,759...150,493,612
Ensembl chr 5:150,446,095...150,493,794 		JBrowse link
G Cdh1 cadherin 1 ISO protein:increased expression:liver RGD PMID:16465411 RGD:14402053 NCBI chr 8:107,329,982...107,396,879
Ensembl chr 8:107,329,983...107,396,878 		JBrowse link
G Cldn1 claudin 1 severity IEP mRNA,protein:decreased expression:liver, embryonic tissue (human) RGD PMID:16647953 RGD:26884349 NCBI chr16:26,175,395...26,190,589
Ensembl chr16:26,175,392...26,190,591 		JBrowse link
G Col7a1 collagen, type VII, alpha 1 ISO ClinVar Annotator: match by term: Hepatoblastoma ClinVar PMID:25741868 PMID:28492532 NCBI chr 9:108,782,654...108,813,943
Ensembl chr 9:108,782,654...108,813,943 		JBrowse link
G Ctnnb1 catenin beta 1 ISO CTD Direct Evidence: marker/mechanism
ClinVar Annotator: match by term: Hepatoblastoma
protein:increased expression:cytoplasm,nucleus: 		CTD
ClinVar
RGD		 PMID:9500465 PMID:9927029 PMID:10192393 PMID:10398436 PMID:10435629 More... RGD:14402054 NCBI chr 9:120,762,466...120,789,573
Ensembl chr 9:120,758,282...120,789,573 		JBrowse link
G Dhcr7 7-dehydrocholesterol reductase ISO ClinVar Annotator: match by term: Hepatoblastoma ClinVar PMID:12270273 PMID:15670717 PMID:16207203 PMID:16392899 PMID:23042628 More... NCBI chr 7:143,376,827...143,402,147
Ensembl chr 7:143,376,882...143,402,147 		JBrowse link
G Dis3l2 DIS3 like 3'-5' exoribonuclease 2 ISO ClinVar Annotator: match by term: Hepatoblastoma ClinVar PMID:28492532 PMID:35495172 NCBI chr 1:86,629,646...86,977,819
Ensembl chr 1:86,631,530...86,977,817 		JBrowse link
G Dock8 dedicator of cytokinesis 8 ISO ClinVar Annotator: match by term: Hepatoblastoma ClinVar PMID:28492532 NCBI chr19:24,976,753...25,179,796
Ensembl chr19:24,976,898...25,179,796 		JBrowse link
G Dpep1 dipeptidase 1 ameliorates ISO human cells in mouse model RGD PMID:31541079 RGD:153344539 NCBI chr 8:123,913,069...123,928,551
Ensembl chr 8:123,912,981...123,928,551 		JBrowse link
G Drosha drosha, ribonuclease type III ISO ClinVar Annotator: match by term: Hepatoblastoma ClinVar NCBI chr15:12,824,893...12,935,377
Ensembl chr15:12,824,901...12,935,377 		JBrowse link
G Ep300 E1A binding protein p300 ISO ClinVar Annotator: match by term: Hepatoblastoma ClinVar PMID:28492532 NCBI chr15:81,470,329...81,536,273
Ensembl chr15:81,469,552...81,536,278 		JBrowse link
G Ercc2 excision repair cross-complementing rodent repair deficiency, complementation group 2 ISO ClinVar Annotator: match by term: Hepatoblastoma ClinVar PMID:24728327 PMID:25741868 PMID:28492532 PMID:29178624 NCBI chr 7:19,115,942...19,129,619
Ensembl chr 7:19,115,935...19,129,619 		JBrowse link
G Ercc5 excision repair cross-complementing rodent repair deficiency, complementation group 5 ISO ClinVar Annotator: match by term: Hepatoblastoma ClinVar NCBI chr 1:44,184,084...44,220,399
Ensembl chr 1:44,186,904...44,220,420 		JBrowse link
G Ext2 exostosin glycosyltransferase 2 ISO ClinVar Annotator: match by term: Hepatoblastoma ClinVar NCBI chr 2:93,525,978...93,652,913
Ensembl chr 2:93,491,373...93,652,913 		JBrowse link
G Fah fumarylacetoacetate hydrolase ISO ClinVar Annotator: match by term: Hepatoblastoma ClinVar NCBI chr 7:84,234,367...84,255,150
Ensembl chr 7:84,234,367...84,255,930 		JBrowse link
G Fanca Fanconi anemia, complementation group A ISO ClinVar Annotator: match by term: Hepatoblastoma ClinVar PMID:24728327 PMID:25741868 PMID:26467025 PMID:28492532 NCBI chr 8:123,993,033...124,045,390
Ensembl chr 8:123,995,039...124,045,315 		JBrowse link
G Fancd2 Fanconi anemia, complementation group D2 ISO ClinVar Annotator: match by term: Hepatoblastoma ClinVar PMID:25741868 PMID:28492532 PMID:28678401 PMID:30306255 NCBI chr 6:113,508,622...113,573,981
Ensembl chr 6:113,508,643...113,573,978 		JBrowse link
G Fancd2os Fancd2 opposite strand ISO ClinVar Annotator: match by term: Hepatoblastoma ClinVar PMID:28492532 NCBI chr 6:113,573,722...113,577,735
Ensembl chr 6:113,573,722...113,577,676 		JBrowse link
G Fancm Fanconi anemia, complementation group M ISO ClinVar Annotator: match by term: Hepatoblastoma ClinVar PMID:25741868 PMID:26467025 PMID:28492532 PMID:28678401 PMID:28881617 More... NCBI chr12:65,120,884...65,178,616
Ensembl chr12:65,122,377...65,178,832 		JBrowse link
G Fas Fas cell surface death receptor ISO mRNA,protein:increased expression:hepatocyte:
ClinVar Annotator: match by term: Hepatoblastoma 		ClinVar
RGD		 PMID:28492532 PMID:10398166 RGD:14700699 NCBI chr19:34,267,926...34,305,175
Ensembl chr19:34,268,066...34,305,172 		JBrowse link
G Fgfr3 fibroblast growth factor receptor 3 ISO ClinVar Annotator: match by term: Hepatoblastoma ClinVar PMID:28492532 PMID:35495172 NCBI chr 5:33,879,068...33,894,412
Ensembl chr 5:33,879,018...33,894,412 		JBrowse link
G Fh1 fumarate hydratase 1 ISO ClinVar Annotator: match by term: Hepatoblastoma ClinVar PMID:25741868 PMID:28492532 NCBI chr 1:175,428,944...175,453,201
Ensembl chr 1:175,427,940...175,453,201 		JBrowse link
G Flcn folliculin ISO ClinVar Annotator: match by term: Hepatoblastoma ClinVar PMID:25741868 PMID:26467025 PMID:28492532 PMID:35495172 NCBI chr11:59,682,234...59,706,138
Ensembl chr11:59,682,234...59,700,842 		JBrowse link
G Flna filamin, alpha ISO ClinVar Annotator: match by term: Hepatoblastoma ClinVar PMID:28492532 NCBI chr  X:73,267,067...73,293,787
Ensembl chr  X:73,267,067...73,293,426 		JBrowse link
G Frmpd1 FERM and PDZ domain containing 1 ISO ClinVar Annotator: match by term: Hepatoblastoma ClinVar NCBI chr 4:45,183,958...45,285,936
Ensembl chr 4:45,184,875...45,285,936 		JBrowse link
G Gba1 glucosylceramidase beta 1 ISO ClinVar Annotator: match by term: Hepatoblastoma ClinVar PMID:12204005 PMID:21228398 PMID:23430543 PMID:25741868 NCBI chr 3:89,110,235...89,119,944
Ensembl chr 3:89,110,235...89,116,273 		JBrowse link
G Gli3 GLI-Kruppel family member GLI3 ISO ClinVar Annotator: match by term: Hepatoblastoma ClinVar PMID:25741868 PMID:28492532 NCBI chr13:15,638,308...15,904,611
Ensembl chr13:15,637,820...15,904,611 		JBrowse link
G Gpc3 glypican 3 ISO protein:increased expression:liver (human) RGD PMID:23530909 RGD:243065128 NCBI chr  X:51,361,303...51,702,851
Ensembl chr  X:51,361,303...51,702,827 		JBrowse link
G Igf2 insulin-like growth factor 2 ISO CTD Direct Evidence: marker/mechanism CTD PMID:23958494 NCBI chr 7:142,204,505...142,220,566
Ensembl chr 7:142,204,503...142,220,553 		JBrowse link
G Jag1 jagged 1 ISO ClinVar Annotator: match by term: Hepatoblastoma ClinVar PMID:25741868 PMID:36965188 NCBI chr 2:136,923,371...136,958,440
Ensembl chr 2:136,923,376...136,958,564 		JBrowse link
G Jmjd1c jumonji domain containing 1C ISO ClinVar Annotator: match by term: Hepatoblastoma ClinVar PMID:28492532 NCBI chr10:66,932,189...67,092,105
Ensembl chr10:66,931,904...67,092,105 		JBrowse link
G Kdr kinase insert domain protein receptor ISO ClinVar Annotator: match by term: Hepatoblastoma ClinVar PMID:25741868 PMID:28492532 NCBI chr 5:76,093,487...76,139,880
Ensembl chr 5:76,093,487...76,139,118 		JBrowse link
G Met met proto-oncogene ISO ClinVar Annotator: match by term: Hepatoblastoma ClinVar PMID:25741868 PMID:27666373 PMID:28492532 NCBI chr 6:17,463,351...17,573,979
Ensembl chr 6:17,463,799...17,573,979 		JBrowse link
G Mir193a microRNA 193a exacerbates ISO RNA:decreased expression:liver (human) RGD PMID:31541079 RGD:153344539 NCBI chr11:79,602,795...79,602,860
Ensembl chr11:79,602,795...79,602,860 		JBrowse link
G Mir21a microRNA 21a ISO miRNA:increased expression:plasma, extracellular exosome RGD PMID:27601233 RGD:14695023 NCBI chr11:86,474,893...86,474,984
Ensembl chr11:86,474,893...86,474,984 		JBrowse link
G Mir34a microRNA 34a severity ISO miRNA:increased expression:liver RGD PMID:27046304 RGD:14695006 NCBI chr 4:150,152,911...150,153,012
Ensembl chr 4:150,152,911...150,153,012 		JBrowse link
G Mki67 antigen identified by monoclonal antibody Ki 67 ameliorates ISO human cells in mouse model RGD PMID:31541079 RGD:153344539 NCBI chr 7:135,291,513...135,318,286
Ensembl chr 7:135,291,513...135,318,090 		JBrowse link
G Msh2 mutS homolog 2 ISO ClinVar Annotator: match by term: Hepatoblastoma ClinVar PMID:28492532 NCBI chr17:87,979,960...88,031,141
Ensembl chr17:87,979,758...88,031,141 		JBrowse link
G Msh6 mutS homolog 6 ISO ClinVar Annotator: match by term: Hepatoblastoma ClinVar PMID:25741868 PMID:28492532 NCBI chr17:88,282,478...88,298,320
Ensembl chr17:88,282,490...88,298,320 		JBrowse link
G Mutyh mutY DNA glycosylase ISO ClinVar Annotator: match by term: Hepatoblastoma ClinVar NCBI chr 4:116,664,846...116,676,641
Ensembl chr 4:116,664,920...116,676,637 		JBrowse link
G Nap1l1 nucleosome assembly protein 1-like 1 ISO mRNA:increased expression:liver (human) RGD PMID:12935928 RGD:9590075 NCBI chr10:111,308,754...111,334,011
Ensembl chr10:111,309,084...111,334,011 		JBrowse link
G Ndrg4 N-myc downstream regulated gene 4 ISO ClinVar Annotator: match by term: Hepatoblastoma ClinVar NCBI chr 8:96,403,602...96,441,584
Ensembl chr 8:96,403,608...96,441,747 		JBrowse link
G Nynrin NYN domain and retroviral integrase containing ISO ClinVar Annotator: match by term: Hepatoblastoma ClinVar NCBI chr14:56,091,572...56,112,193
Ensembl chr14:56,091,467...56,112,193 		JBrowse link
G Pcna proliferating cell nuclear antigen ISO CTD Direct Evidence: marker/mechanism CTD PMID:11560253 NCBI chr 2:132,091,206...132,095,100
Ensembl chr 2:132,091,082...132,095,234 		JBrowse link
G Recql RecQ protein-like ISO ClinVar Annotator: match by term: Hepatoblastoma ClinVar NCBI chr 6:142,296,068...142,332,802
Ensembl chr 6:142,296,068...142,332,813 		JBrowse link
G Recql4 RecQ protein-like 4 ISO ClinVar Annotator: match by term: Hepatoblastoma ClinVar PMID:28492532 NCBI chr15:76,587,753...76,594,820
Ensembl chr15:76,587,753...76,594,748 		JBrowse link
G Ren1 renin 1 structural ISO ClinVar Annotator: match by term: Hepatoblastoma ClinVar PMID:25741868 PMID:28492532 NCBI chr 1:133,278,412...133,288,058
Ensembl chr 1:133,278,248...133,288,063 		JBrowse link
G Rhbdf2 rhomboid 5 homolog 2 ISO ClinVar Annotator: match by term: Hepatoblastoma ClinVar NCBI chr11:116,488,991...116,517,786
Ensembl chr11:116,488,991...116,517,845 		JBrowse link
G Rps19 ribosomal protein S19 ISO ClinVar Annotator: match by term: Hepatoblastoma ClinVar PMID:12586610 PMID:25741868 PMID:28492532 PMID:37897121 NCBI chr 7:24,584,013...24,589,236
Ensembl chr 7:24,583,796...24,589,231 		JBrowse link
G Sall1 spalt like transcription factor 1 ISO embryonal subtype;protein:increased expression:liver, nucleus (human) RGD PMID:23822878 RGD:11556217 NCBI chr 8:89,753,867...89,770,790
Ensembl chr 8:89,753,863...89,770,790 		JBrowse link
G Sall4 spalt like transcription factor 4 ISO Embryonal Hepatoblastoma;protein:increased expression:liver (human) RGD PMID:23822878 RGD:11556217 NCBI chr 2:168,590,252...168,609,121
Ensembl chr 2:168,590,252...168,609,863 		JBrowse link
G Sh2b3 SH2B adaptor protein 3 ISO ClinVar Annotator: match by term: Hepatoblastoma ClinVar PMID:20404132 PMID:25741868 NCBI chr 5:121,953,544...121,975,706
Ensembl chr 5:121,953,551...121,975,709 		JBrowse link
G Slx4 SLX4 structure-specific endonuclease subunit homolog (S. cerevisiae) ISO ClinVar Annotator: match by term: Hepatoblastoma ClinVar PMID:25741868 PMID:28492532 NCBI chr16:3,796,969...3,821,708
Ensembl chr16:3,796,969...3,821,634 		JBrowse link
G Smo smoothened, frizzled class receptor ISO protein:increased expression:liver RGD PMID:21159571 RGD:150521618 NCBI chr 6:29,735,480...29,761,359
Ensembl chr 6:29,735,502...29,761,364 		JBrowse link
G Spop speckle-type BTB/POZ protein ISO mRNA:decreased expression:liver (human) RGD PMID:24912477 RGD:153298925 NCBI chr11:95,304,909...95,384,236
Ensembl chr11:95,304,906...95,384,232 		JBrowse link
G Stk11 serine/threonine kinase 11 ISO ClinVar Annotator: match by term: Hepatoblastoma ClinVar PMID:25741868 PMID:28492532 NCBI chr10:79,951,602...79,966,513
Ensembl chr10:79,951,637...79,966,516 		JBrowse link
G Tgfa transforming growth factor alpha ISO CTD Direct Evidence: marker/mechanism CTD PMID:11560253 NCBI chr 6:86,172,020...86,252,726
Ensembl chr 6:86,172,205...86,252,701 		JBrowse link
G Tgfbr2 transforming growth factor, beta receptor II ISO ClinVar Annotator: match by term: Hepatoblastoma ClinVar NCBI chr 9:115,916,763...116,004,431
Ensembl chr 9:115,913,361...116,004,428 		JBrowse link
G Trp53 transformation related protein 53 ISO ClinVar Annotator: match by term: Hepatoblastoma ClinVar PMID:1565143 PMID:8401536 PMID:8633021 PMID:12826609 PMID:17606709 More... NCBI chr11:69,471,174...69,482,699
Ensembl chr11:69,471,185...69,482,699 		JBrowse link
G Vhl von Hippel-Lindau tumor suppressor ISO ClinVar Annotator: match by term: Hepatoblastoma ClinVar PMID:7563486 PMID:8634692 PMID:8707293 PMID:8772572 PMID:8956040 More... NCBI chr 6:113,600,955...113,608,595
Ensembl chr 6:113,600,920...113,608,594 		JBrowse link
G Zfhx3 zinc finger homeobox 3 ISO protein:increased expression:liver (human) RGD PMID:33368532 RGD:151361168 NCBI chr 8:109,005,975...109,688,272
Ensembl chr 8:108,669,276...109,688,262 		JBrowse link
hepatocellular carcinoma term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G A2m alpha-2-macroglobulin ISO mRNA,protein:increased expression:liver:
CTD Direct Evidence: marker/mechanism 		CTD
RGD		 PMID:15509519 PMID:15509519 RGD:1358261 NCBI chr 6:121,612,920...121,656,197
Ensembl chr 6:121,612,335...121,656,186 		JBrowse link
G A530016L24Rik RIKEN cDNA A530016L24 gene ISO CTD Direct Evidence: marker/mechanism CTD PMID:28284560 NCBI chr12:112,455,829...112,466,362
Ensembl chr12:112,455,882...112,466,361 		JBrowse link
G Aadat aminoadipate aminotransferase ISO CTD Direct Evidence: marker/mechanism CTD PMID:28284560 NCBI chr 8:60,958,877...60,998,711
Ensembl chr 8:60,958,966...60,998,711 		JBrowse link
G Abca1 ATP-binding cassette, sub-family A member 1 severity ISO mRNA:decreased expression:liver (human) RGD PMID:16941710 PMID:30580964 RGD:1598532, RGD:24922199 NCBI chr 4:53,030,789...53,159,988
Ensembl chr 4:53,030,787...53,159,895 		JBrowse link
G Abcb1a ATP-binding cassette, sub-family B member 1A susceptibility ISO DNA:polymorphism: :c.3751G>A(human)
DNA:polymorphism: : c.1465C > T(human)
CTD Direct Evidence: marker/mechanism 		CTD
RGD		 PMID:17510421 PMID:25625052 PMID:24175826 PMID:23488625 RGD:11041138, RGD:14700905, RGD:14700904 NCBI chr 5:8,617,091...8,798,575
Ensembl chr 5:8,710,077...8,798,575 		JBrowse link
G Abcb4 ATP-binding cassette, sub-family B member 4 ISO
IAGP 		CTD Direct Evidence: marker/mechanism
OMIM:114550 		CTD
MouseDO		 PMID:22022477 NCBI chr 5:8,943,614...9,009,226
Ensembl chr 5:8,943,717...9,009,231 		JBrowse link
G Abcc3 ATP-binding cassette, sub-family C member 3 ISO mRNA:increased expression:liver RGD PMID:25842354 RGD:11535155 NCBI chr11:94,234,121...94,283,843
Ensembl chr11:94,234,121...94,283,823 		JBrowse link
G Abce1 ATP-binding cassette, sub-family E member 1 ISO mRNA:increased expression:liver (human) RGD PMID:21932399 RGD:11041873 NCBI chr 8:80,410,071...80,438,369
Ensembl chr 8:80,410,091...80,438,369 		JBrowse link
G Abl1 c-abl oncogene 1, non-receptor tyrosine kinase IMP RGD PMID:32171747 RGD:126907997 NCBI chr 2:31,578,256...31,697,105
Ensembl chr 2:31,578,388...31,694,239 		JBrowse link
G Acaca acetyl-Coenzyme A carboxylase alpha ISO CTD Direct Evidence: marker/mechanism CTD PMID:21147110 NCBI chr11:84,020,461...84,292,477
Ensembl chr11:84,020,498...84,292,477 		JBrowse link
G Ace angiotensin I converting enzyme susceptibility ISO CTD Direct Evidence: therapeutic
DNA:insertion/deletion:intron 16: 		CTD
RGD		 PMID:16328049 PMID:25208933 RGD:11343535 NCBI chr11:105,858,774...105,880,790
Ensembl chr11:105,858,771...105,880,790 		JBrowse link
G Acer3 alkaline ceramidase 3 disease_progression ISO RGD PMID:30097213 RGD:35673325 NCBI chr 7:97,863,015...97,970,415
Ensembl chr 7:97,855,596...97,970,415 		JBrowse link
G Acly ATP citrate lyase ISO CTD Direct Evidence: marker/mechanism CTD PMID:21147110 NCBI chr11:100,367,178...100,418,826
Ensembl chr11:100,367,179...100,418,826 		JBrowse link
G Aco2 aconitase 2, mitochondrial ISO CTD Direct Evidence: marker/mechanism CTD PMID:21472284 NCBI chr15:81,756,664...81,799,338
Ensembl chr15:81,756,510...81,799,334 		JBrowse link
G Acox1 acyl-Coenzyme A oxidase 1, palmitoyl ISO CTD Direct Evidence: marker/mechanism CTD PMID:12771043 PMID:15565109 NCBI chr11:116,062,714...116,089,605
Ensembl chr11:116,062,714...116,089,871 		JBrowse link
G Acsl4 acyl-CoA synthetase long-chain family member 4 ISO CTD Direct Evidence: marker/mechanism CTD PMID:19363144 NCBI chr  X:141,100,989...141,173,792
Ensembl chr  X:141,100,989...141,173,531 		JBrowse link
G Actb actin, beta ISO CTD Direct Evidence: marker/mechanism CTD PMID:19363144 PMID:21472284 NCBI chr 5:142,888,870...142,892,509
Ensembl chr 5:142,888,870...142,892,509 		JBrowse link
G Adamts1 ADAM metallopeptidase with thrombospondin type 1 motif 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:19514085 NCBI chr16:85,590,715...85,600,001
Ensembl chr16:85,590,715...85,600,001 		JBrowse link
G Adamts13 ADAM metallopeptidase with thrombospondin type 1 motif 13 ISO CTD Direct Evidence: marker/mechanism CTD PMID:28284560 NCBI chr 2:26,863,363...26,899,638
Ensembl chr 2:26,863,428...26,899,640 		JBrowse link
G Add1 adducin 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:19363144 NCBI chr 5:34,731,008...34,789,652
Ensembl chr 5:34,731,008...34,789,652 		JBrowse link
G Adgrg7 adhesion G protein-coupled receptor G7 ISO CTD Direct Evidence: marker/mechanism CTD PMID:28284560 NCBI chr16:56,544,972...56,616,369
Ensembl chr16:56,544,972...56,616,218 		JBrowse link
G Adh4 alcohol dehydrogenase 4 (class II), pi polypeptide ISO CTD Direct Evidence: marker/mechanism CTD PMID:28284560 NCBI chr 3:138,121,217...138,138,444
Ensembl chr 3:138,121,227...138,136,653 		JBrowse link
G Adipoq adiponectin, C1Q and collagen domain containing susceptibility ISO DNA:SNP:intron:+276T>G (rs1501299) (human) RGD PMID:23740135 RGD:14401720 NCBI chr16:22,965,286...22,976,718
Ensembl chr16:22,965,286...22,976,778 		JBrowse link
G Adra1a adrenergic receptor, alpha 1a ISO CTD Direct Evidence: marker/mechanism CTD PMID:28284560 NCBI chr14:66,872,705...67,009,549
Ensembl chr14:66,872,700...67,008,617 		JBrowse link
G Adra2b adrenergic receptor, alpha 2b ISO CTD Direct Evidence: marker/mechanism CTD PMID:28284560 NCBI chr 2:127,205,099...127,209,141
Ensembl chr 2:127,205,128...127,209,141 		JBrowse link
G Afp alpha fetoprotein severity
disease_progression
treatment 		ISO protein:increased expression:serum (human)
associated with hepatitis B
CTD Direct Evidence: marker/mechanism 		CTD
RGD		 PMID:9029167 PMID:15276417 PMID:24012840 PMID:28284560 PMID:32961231 More... RGD:14401581, RGD:126790579, RGD:126790583, RGD:125097525, RGD:152177911 NCBI chr 5:90,638,573...90,656,766
Ensembl chr 5:90,638,596...90,656,766 		JBrowse link
G Aicda activation-induced cytidine deaminase IGI RGD PMID:18997814 RGD:127285629 NCBI chr 6:122,530,768...122,541,139
Ensembl chr 6:122,530,760...122,541,139 		JBrowse link
G Ak3 adenylate kinase 3 ISO protein:decreased expression:liver RGD PMID:17203974 RGD:13842477 NCBI chr19:28,968,715...29,026,122
Ensembl chr19:28,998,233...29,025,361 		JBrowse link
G Akr1a1 aldo-keto reductase family 1, member A1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:32805337 NCBI chr 4:116,493,707...116,508,871
Ensembl chr 4:116,493,707...116,508,877 		JBrowse link
G Akr1b1 aldo-keto reductase family 1 member B ISO protein:increased expression:liver (human)
protein:increased expression:liver (rat) 		RGD PMID:19422879 PMID:21683810 RGD:8548685, RGD:5509919 NCBI chr 6:34,280,865...34,294,424
Ensembl chr 6:34,279,369...34,294,413 		JBrowse link
G Akr1b10 aldo-keto reductase family 1, member B10 ISO CTD Direct Evidence: marker/mechanism CTD PMID:21472284 NCBI chr 6:34,361,182...34,373,884
Ensembl chr 6:34,361,153...34,373,885 		JBrowse link
G Akr1c21 aldo-keto reductase family 1, member C21 ISO CTD Direct Evidence: marker/mechanism CTD PMID:21472284 NCBI chr13:4,624,074...4,636,542
Ensembl chr13:4,624,074...4,636,540 		JBrowse link
G Akt1 thymoma viral proto-oncogene 1 exacerbates
treatment 		ISO CTD Direct Evidence: marker/mechanism
mRNA:increased expression:liver 		CTD
RGD		 PMID:32045588 PMID:37460115 PMID:25999787 PMID:31801250 RGD:408364960, RGD:152177911, RGD:151893509 NCBI chr12:112,620,260...112,641,266
Ensembl chr12:112,620,255...112,641,318 		JBrowse link
G Akt2 thymoma viral proto-oncogene 2 ISO
IEP 		protein:increased phosphorylation:liver cancer cell (rat)
protein:increased phosphorylation:liver (mouse) 		RGD PMID:19309364 PMID:28100771 RGD:2313299, RGD:127285675 NCBI chr 7:27,290,977...27,340,251
Ensembl chr 7:27,290,977...27,340,251 		JBrowse link
G Alb albumin susceptibility ISO associated with hepatitis C;protein:decreased expression:serum
protein:decreased expression:serum (human) 		RGD PMID:23892757 PMID:29040987 PMID:22392353 RGD:11035269, RGD:14694841, RGD:125097525 NCBI chr 5:90,608,729...90,624,461
Ensembl chr 5:90,608,756...90,624,461 		JBrowse link
G Aldh2 aldehyde dehydrogenase 2, mitochondrial susceptibility
no_association
severity 		ISO associated with alcoholic liver cirrhosis;DNA:missense mutation:cds:p.E487K (human)
associated with alcohol use disorder;DNA:missense mutation:cds: (human)
DNA:missense mutation:exon 12: (human)
associated with hepatitis B;DNA;missense mutation, haplotype:cds: (rs671) (human)
DNA:missense mutation:cds: (rs671) (human)
mRNA, protein:decreased expression:liver (human)
protein:decreased expression: liver (human)
associated with hepatitis C:DNA:SNP:exon 12 (human)
DNA:missense mutation:cds, exon 12:p.E487K (human) 		RGD PMID:25778454 PMID:18439068 PMID:10737710 PMID:26827895 PMID:29765251 More... RGD:11054822, RGD:15042862, RGD:15042859, RGD:15042857, RGD:14700899, RGD:15036809, RGD:14696779, RGD:14696778, RGD:14696699 NCBI chr 5:121,704,090...121,731,887
Ensembl chr 5:121,704,090...121,731,887 		JBrowse link
G Aldh7a1 aldehyde dehydrogenase family 7, member A1 severity ISO mRNA:altered expression:liver tumor (human) RGD PMID:30901224 RGD:152995286 NCBI chr18:56,657,794...56,706,112
Ensembl chr18:56,642,759...56,706,023 		JBrowse link
G Aldoc aldolase C, fructose-bisphosphate ISO mRNA:increased expression:liver RGD PMID:3830170 RGD:2301136 NCBI chr11:78,213,899...78,218,607
Ensembl chr11:78,213,794...78,218,607 		JBrowse link
G Alx4 aristaless-like homeobox 4 ameliorates ISO mRNA, protein:decreased expression:liver RGD PMID:28081728 PMID:31132711 PMID:31132711 RGD:153323329, RGD:153323330, RGD:153323330 NCBI chr 2:93,472,779...93,511,686
Ensembl chr 2:93,472,729...93,511,684 		JBrowse link
G Angptl6 angiopoietin-like 6 ISO CTD Direct Evidence: marker/mechanism CTD PMID:28284560 NCBI chr 9:20,785,104...20,791,116
Ensembl chr 9:20,785,104...20,791,023 		JBrowse link
G Ank3 ankyrin 3, epithelial IEP protein:decreased expression:liver RGD PMID:26652480 RGD:153344559 NCBI chr10:69,234,608...69,863,266
Ensembl chr10:69,234,603...69,863,268 		JBrowse link
G Anln anillin, actin binding protein ISO CTD Direct Evidence: marker/mechanism CTD PMID:28284560 NCBI chr 9:22,243,305...22,302,132
Ensembl chr 9:22,243,308...22,300,484 		JBrowse link
G Antxr1 anthrax toxin receptor 1 treatment IDA RGD PMID:20650339 RGD:9684932 NCBI chr 6:87,110,835...87,312,757
Ensembl chr 6:87,110,835...87,312,803 		JBrowse link
G Anxa10 annexin A10 disease_progression ISO mRNA:decreased expression:liver (human) RGD PMID:35693827 RGD:153344586 NCBI chr 8:62,510,076...62,576,227
Ensembl chr 8:62,510,076...62,576,184 		JBrowse link
G Anxa2 annexin A2 ISO mRNA, protein:increased expression:liver (human) RGD PMID:33675609 RGD:152999436 NCBI chr 9:69,360,978...69,399,074
Ensembl chr 9:69,360,902...69,399,077 		JBrowse link
G Anxa4 annexin A4 ISO CTD Direct Evidence: marker/mechanism CTD PMID:21472284 NCBI chr 6:86,713,822...86,770,616
Ensembl chr 6:86,713,822...86,770,566 		JBrowse link
G Anxa6 annexin A6 disease_progression ISO associated with tumor vascularization; protein:decreased expression:liver tumor (human) RGD PMID:30901224 RGD:152995286 NCBI chr11:54,869,779...54,924,297
Ensembl chr11:54,869,934...54,924,271 		JBrowse link
G Apc APC, WNT signaling pathway regulator ISO
IAGP 		ClinVar Annotator: match by term: Hepatocellular cancer | ClinVar Annotator: match by term: Hepatocellular carcinoma
OMIM:114550
DNA:hypermethylation
CTD Direct Evidence: marker/mechanism 		OMIM
ClinVar
MouseDO
CTD
RGD		 PMID:1316610 PMID:8381579 PMID:8381580 PMID:8395941 PMID:9101302 More... RGD:14402050 NCBI chr18:34,353,350...34,455,243
Ensembl chr18:34,353,977...34,455,605 		JBrowse link
G Apcs amyloid P component, serum ISO CTD Direct Evidence: marker/mechanism CTD PMID:19363144 NCBI chr 1:172,721,528...172,722,516
Ensembl chr 1:172,721,528...172,722,608 		JBrowse link
G Apex1 apurinic/apyrimidinic endonuclease 1 treatment ISO CTD Direct Evidence: marker/mechanism CTD
RGD		 PMID:25109342 PMID:33841550 RGD:152998960 NCBI chr14:51,162,406...51,164,645
Ensembl chr14:51,162,425...51,164,596 		JBrowse link
G Apln apelin ISO CTD Direct Evidence: marker/mechanism CTD PMID:28284560 NCBI chr  X:47,114,023...47,123,730
Ensembl chr  X:47,114,023...47,123,730 		JBrowse link
G Apoa1 apolipoprotein A-I disease_progression ISO CTD Direct Evidence: marker/mechanism
associated with hepatitis B;
protein:decreased expression:plasma (human) 		CTD
RGD		 PMID:21472284 PMID:31211449 PMID:23935864 RGD:153350082, RGD:25671438 NCBI chr 9:46,139,928...46,141,767
Ensembl chr 9:46,139,878...46,141,764 		JBrowse link
G Apoa2 apolipoprotein A-II ISO associated with hepatitis B; mRNA:increased expression:liver RGD PMID:31211449 RGD:153350082 NCBI chr 1:171,049,133...171,053,948
Ensembl chr 1:171,052,623...171,053,948 		JBrowse link
G Apoa4 apolipoprotein A-IV disease_progression ISO associated with hepatitis B; RGD PMID:31211449 RGD:153350082 NCBI chr 9:46,152,142...46,154,756
Ensembl chr 9:46,151,994...46,154,757 		JBrowse link
G Apoc1 apolipoprotein C-I disease_progression ISO associated with hepatitis B; RGD PMID:31211449 RGD:153350082 NCBI chr 7:19,423,405...19,426,584
Ensembl chr 7:19,423,406...19,426,585 		JBrowse link
G Apoc2 apolipoprotein C2 ISO associated with hepatitis B; mRNA:increased expression:liver RGD PMID:31211449 RGD:153350082 NCBI chr 7:19,405,504...19,411,866
Ensembl chr 7:19,405,504...19,411,866 		JBrowse link
G Apoc3 apolipoprotein C-III susceptibility
disease_progression 		ISO associated with Chronic Hepatitis B;DNA:SNP: :rs2854116(human)
associated with hepatitis B; 		RGD PMID:27547913 PMID:31211449 RGD:153344620, RGD:153350082 NCBI chr 9:46,144,348...46,146,934
Ensembl chr 9:46,144,231...46,146,934 		JBrowse link
G Apoc4 apolipoprotein C-IV disease_progression ISO associated with hepatitis B; RGD PMID:31211449 RGD:153350082 NCBI chr 7:19,412,009...19,415,385
Ensembl chr 7:19,412,008...19,415,404 		JBrowse link
G Apoe apolipoprotein E IEP protein:increased expression:liver, serum (mouse) RGD PMID:21644509 RGD:6903288 NCBI chr 7:19,430,169...19,434,326
Ensembl chr 7:19,430,034...19,433,113 		JBrowse link
G Apof apolipoprotein F ISO CTD Direct Evidence: marker/mechanism CTD PMID:28284560 NCBI chr10:128,104,568...128,107,119
Ensembl chr10:128,103,866...128,106,022 		JBrowse link
G Aprt adenine phosphoribosyl transferase ISO protein:increased activity:hepatoma (rat) RGD PMID:6327016 RGD:5135035 NCBI chr 8:123,301,376...123,303,646
Ensembl chr 8:123,301,374...123,303,648 		JBrowse link
G Ar androgen receptor ISO CTD Direct Evidence: therapeutic CTD PMID:18639551 NCBI chr  X:97,192,363...97,366,824
Ensembl chr  X:97,192,375...97,366,821 		JBrowse link
G Arg1 arginase, liver disease_progression ISO associated with tumor vascularization; mRNA,protein:decreased expression:liver tumor (human) RGD PMID:17210712 PMID:30901224 RGD:4140476, RGD:152995286 NCBI chr10:24,791,105...24,803,368
Ensembl chr10:24,791,119...24,803,382 		JBrowse link
G Arhgap11a Rho GTPase activating protein 11A ISO CTD Direct Evidence: marker/mechanism CTD PMID:28284560 NCBI chr 2:113,661,837...113,679,006
Ensembl chr 2:113,661,837...113,679,006 		JBrowse link
G Arhgap44 Rho GTPase activating protein 44 exacerbates ISO protein:decreased expression:liver (human) RGD PMID:31136984 RGD:401901276 NCBI chr11:64,892,865...65,053,779
Ensembl chr11:64,892,865...65,053,787 		JBrowse link
G Arhgef39 Rho guanine nucleotide exchange factor 39 ISO CTD Direct Evidence: marker/mechanism CTD PMID:28284560 NCBI chr 4:43,496,139...43,508,747
Ensembl chr 4:43,496,142...43,499,695 		JBrowse link
G Arid1a AT-rich interaction domain 1A exacerbates
treatment 		ISO
IMP 		CTD Direct Evidence: marker/mechanism
human gene in mouse model
associated with non-alcoholic steatohepatitis
mRNA, protein:decreased expression:liver (human)
mRNA, protein:increased expression:liver (human) 		CTD
RGD		 PMID:22561517 PMID:22634756 PMID:22922871 PMID:29136504 PMID:29136504 More... RGD:126790634, RGD:126790634, RGD:11344640, RGD:125097519, RGD:125097495, RGD:125097485 NCBI chr 4:133,406,319...133,484,682
Ensembl chr 4:133,406,319...133,484,080 		JBrowse link
G Arid1b AT-rich interaction domain 1B ISO CTD Direct Evidence: marker/mechanism CTD PMID:22634756 NCBI chr17:5,044,481...5,397,931
Ensembl chr17:5,044,607...5,397,931 		JBrowse link
G Arid2 AT-rich interaction domain 2 disease_progression
exacerbates 		ISO CTD Direct Evidence: marker/mechanism
associated with hepatitis B;protein:decreased expression:liver 		CTD
RGD		 PMID:21822264 PMID:22634756 PMID:25701229 PMID:28498550 PMID:27351279 More... RGD:150429631, RGD:150340712, RGD:150340711, RGD:150340708 NCBI chr15:96,185,403...96,303,344
Ensembl chr15:96,185,399...96,302,873 		JBrowse link
G Arid3a AT-rich interaction domain 3A ISO CTD Direct Evidence: marker/mechanism CTD PMID:35179300 NCBI chr10:79,762,877...79,790,852
Ensembl chr10:79,762,877...79,790,852 		JBrowse link
G Arrb2 arrestin, beta 2 treatment ISO RGD PMID:33841550 RGD:152998960 NCBI chr11:70,323,051...70,331,654
Ensembl chr11:70,323,461...70,331,654 		JBrowse link
G Asf1b anti-silencing function 1B histone chaperone ISO CTD Direct Evidence: marker/mechanism CTD PMID:28284560 NCBI chr 8:84,682,323...84,696,824
Ensembl chr 8:84,682,136...84,696,826 		JBrowse link
G Asl argininosuccinate lyase disease_progression ISO associated with tumor vascularization; mRNA,protein:decreased expression:liver tumor (human) RGD PMID:30901224 RGD:152995286 NCBI chr 5:130,040,099...130,053,222
Ensembl chr 5:130,040,099...130,058,088 		JBrowse link
G Asns asparagine synthetase ISO protein:increased activity:serum (rat) RGD PMID:10081 RGD:2316006 NCBI chr 6:7,675,169...7,693,209
Ensembl chr 6:7,675,169...7,693,254 		JBrowse link
G Aspg asparaginase ISO CTD Direct Evidence: marker/mechanism CTD PMID:28284560 NCBI chr12:112,073,117...112,094,007
Ensembl chr12:112,073,113...112,093,993 		JBrowse link
G Aspm abnormal spindle microtubule assembly disease_progression ISO CTD Direct Evidence: marker/mechanism CTD
RGD		 PMID:28284560 PMID:18676753 RGD:13439743 NCBI chr 1:139,381,450...139,421,826
Ensembl chr 1:139,382,510...139,421,829 		JBrowse link
G Ass1 argininosuccinate synthetase 1 disease_progression ISO associated with tumor vascularization; mRNA,protein:decreased expression:liver tumor (human) RGD PMID:12359751 PMID:30901224 RGD:4140479, RGD:152995286 NCBI chr 2:31,360,282...31,410,682
Ensembl chr 2:31,360,219...31,410,684 		JBrowse link
G Atg101 autophagy related 101 disease_progression ISO RGD PMID:35592424 RGD:153350091 NCBI chr15:101,182,182...101,188,855
Ensembl chr15:101,182,153...101,188,826 		JBrowse link
G Atg7 autophagy related 7 ISO CTD Direct Evidence: marker/mechanism CTD PMID:29191453 NCBI chr 6:114,620,075...114,837,565
Ensembl chr 6:114,620,058...114,837,575 		JBrowse link
G Atm ataxia telangiectasia mutated exacerbates ISO CTD Direct Evidence: marker/mechanism
protein:increased expression:liver (human) 		CTD
RGD		 PMID:12866955 PMID:19919837 RGD:126781750 NCBI chr 9:53,348,422...53,448,125
Ensembl chr 9:53,350,449...53,448,040 		JBrowse link
G Atp5pb ATP synthase peripheral stalk-membrane subunit b ISO associated with hepatitis C RGD PMID:18932288 RGD:14696822 NCBI chr 3:105,850,014...105,866,579
Ensembl chr 3:105,850,014...105,867,415 		JBrowse link
G Atp5pd ATP synthase peripheral stalk subunit d ISO CTD Direct Evidence: marker/mechanism CTD PMID:21472284 NCBI chr11:115,306,517...115,310,775
Ensembl chr11:115,306,515...115,310,788 		JBrowse link
G Aurka aurora kinase A ISO CTD Direct Evidence: marker/mechanism CTD PMID:28284560 NCBI chr 2:172,198,116...172,212,825
Ensembl chr 2:172,198,110...172,212,455 		JBrowse link
G Aurkb aurora kinase B ISO CTD Direct Evidence: marker/mechanism CTD PMID:28284560 NCBI chr11:68,936,477...68,942,490
Ensembl chr11:68,936,473...68,942,490 		JBrowse link
G Axin1 axin 1 disease_progression ISO
IMP 		ClinVar Annotator: match by term: AXIN1-related condition | ClinVar Annotator: match by term: Hepatocellular cancer | ClinVar Annotator: match by term: Hepatocellular carcinoma
protein:decreased expression:liver (human)
associated with Hepatitis B, Chronic,DNA:SNP, haplotype:exon:(rs1805105) T>C (human)
CTD Direct Evidence: marker/mechanism 		OMIM
ClinVar
CTD
RGD		 PMID:10700176 PMID:25741868 PMID:25822088 PMID:28492532 PMID:37582359 More... RGD:150530482, RGD:150530481, RGD:14402039, RGD:1300371 NCBI chr17:26,350,294...26,414,784
Ensembl chr17:26,357,662...26,414,785 		JBrowse link
G Axin2 axin 2 ISO protein:increased expression:liver: RGD PMID:11809809 RGD:151356508 NCBI chr11:108,808,687...108,841,609
Ensembl chr11:108,811,175...108,841,609 		JBrowse link
G Azgp1 alpha-2-glycoprotein 1, zinc disease_progression ISO mRNA:decreased expression:liver RGD PMID:22625427 PMID:26902423 PMID:27993894 RGD:153350130, RGD:153350133, RGD:153350132 NCBI chr 5:137,979,783...137,988,495
Ensembl chr 5:137,979,782...137,988,495 		JBrowse link
G Azin1 antizyme inhibitor 1 disease_progression ISO RNA:increased editing:liver RGD PMID:23291631 RGD:14700705 NCBI chr15:38,487,674...38,523,506
Ensembl chr15:38,487,671...38,519,510 		JBrowse link
G Banf1 BAF nuclear assembly factor 1 treatment ISO
IMP 		mRNA, protein:increased expression:liver (rat)
mRNA, protein:increased expression:liver (human) 		RGD PMID:29059470 PMID:29059470 PMID:29059470 RGD:155791679, RGD:155791679, RGD:155791679 NCBI chr19:5,414,661...5,416,904
Ensembl chr19:5,414,666...5,417,196 		JBrowse link
G Bax BCL2-associated X protein treatment ISO RGD PMID:33841550 RGD:152998960 NCBI chr 7:45,111,124...45,116,332
Ensembl chr 7:45,111,121...45,116,322 		JBrowse link
G Bcl2 B cell leukemia/lymphoma 2 treatment IEP
ISO 		mRNA:increased expression:liver (mouse) RGD PMID:28100771 PMID:33841550 RGD:127285675, RGD:152998960 NCBI chr 1:106,465,906...106,642,020
Ensembl chr 1:106,465,908...106,642,004 		JBrowse link
G Bcl2l1 BCL2-like 1 treatment ISO
IEP 		CTD Direct Evidence: marker/mechanism|therapeutic
mRNA:increased expression:liver (mouse) 		CTD
RGD		 PMID:10629087 PMID:11509945 PMID:33841550 PMID:28100771 RGD:152998960, RGD:127285675 NCBI chr 2:152,600,652...152,673,632
Ensembl chr 2:152,622,588...152,673,648 		JBrowse link
G Bco2 beta-carotene oxygenase 2 ISO CTD Direct Evidence: marker/mechanism CTD PMID:28284560 NCBI chr 9:50,444,387...50,466,513
Ensembl chr 9:50,444,387...50,466,481 		JBrowse link
G Bcorl1 BCL6 co-repressor-like 1 disease_progression ISO RGD PMID:29679906 PMID:26879601 RGD:150340705, RGD:11556159 NCBI chr  X:47,430,235...47,496,945
Ensembl chr  X:47,430,235...47,496,926 		JBrowse link
G Bhmt betaine-homocysteine methyltransferase disease_progression ISO associated with tumor vascularization; mRNA,protein:decreased expression:liver tumor (human) RGD PMID:30901224 RGD:152995286 NCBI chr13:93,753,399...93,774,266
Ensembl chr13:93,753,183...93,774,469 		JBrowse link
G Bhmt2 betaine-homocysteine methyltransferase 2 severity ISO mRNA:altered expression:liver tumor (human) RGD PMID:30901224 RGD:152995286 NCBI chr13:93,792,605...93,810,810
Ensembl chr13:93,792,228...93,810,810 		JBrowse link
G Bid BH3 interacting domain death agonist ISO CTD Direct Evidence: marker/mechanism CTD PMID:15289866 NCBI chr 6:120,870,080...120,894,074
Ensembl chr 6:120,868,891...120,893,814 		JBrowse link
G Birc3 baculoviral IAP repeat-containing 3 ameliorates
treatment
exacerbates 		ISO human cell line in a mouse model
mRNA, protein:increased expression:liver (human)
associated with hepatitis B;mRNA, protein:increased expression:liver (human) 		RGD PMID:30368883 PMID:30210622 PMID:33310033 PMID:22820591 PMID:22682366 RGD:152998937, RGD:152999010, RGD:152998988, RGD:152998986, RGD:152998984 NCBI chr 9:7,848,698...7,873,199
Ensembl chr 9:7,848,700...7,873,187 		JBrowse link
G Birc5 baculoviral IAP repeat-containing 5 disease_progression ISO CTD Direct Evidence: marker/mechanism|therapeutic
mRNA:increased expression:liver (human) 		CTD
RGD		 PMID:16086872 PMID:20514400 PMID:31964418 RGD:153344516 NCBI chr11:117,740,063...117,746,569
Ensembl chr11:117,740,077...117,746,569 		JBrowse link
G Birc7 baculoviral IAP repeat-containing 7 exacerbates ISO mRNA:increased expression:liver (human) RGD PMID:31964418 RGD:153344516 NCBI chr 2:180,570,402...180,575,803
Ensembl chr 2:180,570,816...180,575,803 		JBrowse link
G Blzf1 basic leucine zipper nuclear factor 1 disease_progression ISO RGD PMID:26342799 RGD:14398326 NCBI chr 1:164,117,368...164,135,056
Ensembl chr 1:164,117,369...164,135,058 		JBrowse link
G Bmi1 Bmi1 polycomb ring finger oncogene treatment ISO RGD PMID:26919246 RGD:14928318 NCBI chr 2:18,681,953...18,691,440
Ensembl chr 2:18,681,829...18,691,440 		JBrowse link
G Bmper BMP-binding endothelial regulator ISO CTD Direct Evidence: marker/mechanism CTD PMID:28284560 NCBI chr 9:23,134,372...23,396,511
Ensembl chr 9:23,134,372...23,396,496 		JBrowse link
G Braf Braf transforming gene ISO CTD Direct Evidence: marker/mechanism CTD PMID:27222248 NCBI chr 6:39,580,171...39,702,592
Ensembl chr 6:39,580,171...39,702,397 		JBrowse link
G Bsg basigin ISO CTD Direct Evidence: marker/mechanism CTD PMID:36574092 NCBI chr10:79,540,192...79,547,813
Ensembl chr10:79,540,325...79,547,803 		JBrowse link
G Btg2 BTG anti-proliferation factor 2 ISO CTD Direct Evidence: marker/mechanism CTD PMID:18393292 NCBI chr 1:134,002,603...134,006,893
Ensembl chr 1:134,002,908...134,006,858 		JBrowse link
G Bub1 BUB1, mitotic checkpoint serine/threonine kinase ISO CTD Direct Evidence: marker/mechanism CTD PMID:28284560 NCBI chr 2:127,642,117...127,673,790
Ensembl chr 2:127,643,036...127,673,785 		JBrowse link
G Bub1b BUB1B, mitotic checkpoint serine/threonine kinase ISO CTD Direct Evidence: marker/mechanism CTD PMID:28284560 NCBI chr 2:118,428,684...118,472,073
Ensembl chr 2:118,428,692...118,472,072 		JBrowse link
G C3 complement component 3 ISO RGD PMID:23245919 RGD:11040806 NCBI chr17:57,510,967...57,535,136
Ensembl chr17:57,510,970...57,535,136 		JBrowse link
G C9 complement component 9 ISO CTD Direct Evidence: marker/mechanism CTD PMID:19363144 PMID:28284560 NCBI chr15:6,474,827...6,528,306
Ensembl chr15:6,474,808...6,528,232 		JBrowse link
G Cab39 calcium binding protein 39 disease_progression ISO RGD PMID:28605041 PMID:28605041 RGD:14398832, RGD:14398832 NCBI chr 1:85,707,796...85,779,298
Ensembl chr 1:85,721,162...85,779,297 		JBrowse link
G Cad carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase ISO DNA:amplification:cds (rat)
mRNA:increased expression:liver 		RGD PMID:2914957 PMID:7053379 PMID:2888462 RGD:5132587, RGD:10755426, RGD:2303530 NCBI chr 5:31,211,964...31,235,823
Ensembl chr 5:31,212,124...31,235,823 		JBrowse link
G Cadm1 cell adhesion molecule 1 ISO DNA, mRNA, protein:hypermethylation, decreased expression:promoter, liver RGD PMID:17428255 RGD:2289095 NCBI chr 9:47,441,468...47,773,578
Ensembl chr 9:47,441,471...47,769,413 		JBrowse link
G Cadm2 cell adhesion molecule 2 disease_progression ISO mRNA, protein:decreased expression:liver RGD PMID:24240726 RGD:15092075 NCBI chr16:66,452,302...67,417,825
Ensembl chr16:66,452,307...67,417,796 		JBrowse link
G Calml3 calmodulin-like 3 severity ISO protein:decreased expression:liver (human) RGD PMID:29445139 RGD:151665319 NCBI chr13:3,852,893...3,854,318
Ensembl chr13:3,852,896...3,854,316 		JBrowse link
G Calr calreticulin exacerbates
treatment 		ISO protein:increased expression:liver (human)
human cells and recombinant gene in a mouse model 		RGD PMID:27055635 PMID:24997628 PMID:12096119 RGD:150521681, RGD:150521691, RGD:150521690 NCBI chr 8:85,568,717...85,573,560
Ensembl chr 8:85,568,479...85,573,563 		JBrowse link
G Camk2n1 calcium/calmodulin-dependent protein kinase II inhibitor 1 ISO RGD PMID:23651211 RGD:18337283 NCBI chr 4:138,182,459...138,187,437
Ensembl chr 4:138,181,625...138,187,434 		JBrowse link
G Cap2 cyclase associated actin cytoskeleton regulatory protein 2 ISO CTD Direct Evidence: marker/mechanism CTD PMID:28284560 NCBI chr13:46,655,379...46,803,757
Ensembl chr13:46,655,324...46,803,757 		JBrowse link
G Capn3 calpain 3 ISO mRNA:decreased expression:skeletal muscle RGD PMID:10806331 RGD:1600777 NCBI chr 2:120,294,074...120,335,400
Ensembl chr 2:120,294,053...120,335,399 		JBrowse link
G Car12 carbonic anhydrase 12 disease_progression
ameliorates 		ISO
IMP 		mRNA:altered expression:liver RGD PMID:35362480 PMID:29900055 PMID:31934040 PMID:35362480 RGD:153352325, RGD:155226869, RGD:153352328, RGD:153352325 NCBI chr 9:66,619,026...66,674,127
Ensembl chr 9:66,620,968...66,674,127 		JBrowse link
G Car2 carbonic anhydrase 2 ISO CTD Direct Evidence: marker/mechanism CTD PMID:21472284 NCBI chr 3:14,951,329...14,965,830
Ensembl chr 3:14,951,333...14,965,830 		JBrowse link
G Car9 carbonic anhydrase 9 ISO mRNA:altered expression:liver RGD PMID:29900055 RGD:155226869 NCBI chr 4:43,507,026...43,513,729
Ensembl chr 4:43,506,966...43,513,729 		JBrowse link
G Carm1 coactivator-associated arginine methyltransferase 1 ISO mRNA,protein:increased expression:liver: RGD PMID:23912631 RGD:9586718 NCBI chr 9:21,458,163...21,500,763
Ensembl chr 9:21,458,190...21,503,919 		JBrowse link
G Casp3 caspase 3 treatment ISO RGD PMID:29133031 PMID:33841550 RGD:13782296, RGD:152998960 NCBI chr 8:47,070,326...47,092,733
Ensembl chr 8:47,070,326...47,092,724 		JBrowse link
G Casp8 caspase 8 severity
treatment 		ISO CTD Direct Evidence: marker/mechanism
associated with hepatitis B;DNA:insertion/deletion:promoter: (rs3834129) (human) 		OMIM
CTD
RGD		 PMID:28643196 PMID:29133031 RGD:14695027, RGD:13782296 NCBI chr 1:58,834,553...58,886,663
Ensembl chr 1:58,834,533...58,886,662 		JBrowse link
G Casp9 caspase 9 treatment ISO RGD PMID:29133031 RGD:13782296 NCBI chr 4:141,520,923...141,543,289
Ensembl chr 4:141,520,923...141,543,287 		JBrowse link
G Cat catalase disease_progression ISO associated with liver cirrhosis with Hepatitis C;DNA:SNP:promoter:-262T>C (human)
CTD Direct Evidence: marker/mechanism 		CTD
RGD		 PMID:33010264 PMID:21907168 RGD:27095879 NCBI chr 2:103,284,249...103,315,498
Ensembl chr 2:103,284,194...103,315,505 		JBrowse link
G Cbfb core binding factor beta ISO mRNA:decreased expression:liver RGD PMID:17094378 RGD:126775147 NCBI chr 8:105,897,306...105,944,621
Ensembl chr 8:105,897,306...105,944,621 		JBrowse link
G Cbl Casitas B-lineage lymphoma disease_progression ISO RGD PMID:26474280 RGD:11536137 NCBI chr 9:44,054,273...44,145,556
Ensembl chr 9:44,054,273...44,145,346 		JBrowse link
G Cbr1 carbonyl reductase 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:21056497 NCBI chr16:93,404,752...93,407,226
Ensembl chr16:93,402,741...93,407,393 		JBrowse link
G Cbx2 chromobox 2 disease_progression ISO mRNA:increased expression:liver (human) RGD PMID:35693827 RGD:153344586 NCBI chr11:118,913,845...118,922,101
Ensembl chr11:118,913,788...118,922,096 		JBrowse link
G Cbx4 chromobox 4 disease_progression ISO protein:increased expression:cytoplasm: RGD PMID:24838576 PMID:23943028 RGD:9586738, RGD:9586739 NCBI chr11:118,968,399...118,977,067
Ensembl chr11:118,968,399...118,977,047 		JBrowse link
G Cbx7 chromobox 7 ISO mRNA:decreased expression:liver RGD PMID:22041561 RGD:9587355 NCBI chr15:79,800,005...79,855,344
Ensembl chr15:79,800,008...79,855,320 		JBrowse link
G Ccbe1 collagen and calcium binding EGF domains 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:28284560 NCBI chr18:66,189,926...66,424,909
Ensembl chr18:66,178,373...66,435,812 		JBrowse link
G Ccl1 C-C motif chemokine ligand 1 IEP mRNA:increased expression:liver (mouse) RGD PMID:26569409 RGD:11344640 NCBI chr11:82,067,492...82,070,638
Ensembl chr11:82,067,483...82,196,516 		JBrowse link
G Ccl12 C-C motif chemokine ligand 12 IEP mRNA:increased expression:liver (mouse) RGD PMID:26569409 RGD:11344640 NCBI chr11:81,992,671...81,994,225
Ensembl chr11:81,992,671...81,994,226 		JBrowse link
G Ccl2 C-C motif chemokine ligand 2 treatment ISO
IMP 		RNA:increased expression:liver RGD PMID:27980102 PMID:22402625 PMID:12679798 PMID:27980102 RGD:14995459, RGD:14995927, RGD:14995468, RGD:14995459 NCBI chr11:81,926,403...81,928,278
Ensembl chr11:81,926,397...81,928,279 		JBrowse link
G Ccl3 C-C motif chemokine ligand 3 ISO CTD Direct Evidence: marker/mechanism CTD PMID:16284949 NCBI chr11:83,538,669...83,540,204
Ensembl chr11:83,538,670...83,540,181 		JBrowse link
G Ccl5 C-C motif chemokine ligand 5 treatment
susceptibility 		IMP
ISO 		associated with alcoholic liver cirrhosis;DNA:SNP:promoter:-403G>A(human)
DNA:polymorphisms:promoter:-403G>A,-28C>G (human) 		RGD PMID:28011329 PMID:21610221 PMID:22374185 RGD:14995306, RGD:14995338, RGD:14995333 NCBI chr11:83,416,604...83,421,344
Ensembl chr11:83,416,604...83,421,344 		JBrowse link
G Ccl9 C-C motif chemokine ligand 9 IEP mRNA:increased expression:liver (mouse) RGD PMID:26569409 RGD:11344640 NCBI chr11:83,463,743...83,469,462
Ensembl chr11:83,463,745...83,469,462 		JBrowse link
G Ccn1 cellular communication network factor 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:17699798 NCBI chr 3:145,352,726...145,355,740
Ensembl chr 3:145,352,731...145,355,736 		JBrowse link
G Ccna1 cyclin A1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:12029619 NCBI chr 3:54,952,890...54,965,055
Ensembl chr 3:54,952,890...54,962,922 		JBrowse link
G Ccnb1 cyclin B1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:28284560 NCBI chr13:100,915,247...100,922,994
Ensembl chr13:100,915,158...100,923,078 		JBrowse link
G Ccnb2 cyclin B2 ISO CTD Direct Evidence: marker/mechanism CTD PMID:28284560 NCBI chr 9:70,314,971...70,328,836
Ensembl chr 9:70,314,974...70,328,829 		JBrowse link
G Ccnd1 cyclin D1 susceptibility ISO
IEP 		associated with Hepatitis B, Chronic;DNA:SNP:splice-site mutation:870G>A (human)
CTD Direct Evidence: marker/mechanism
mRNA:increased expression:liver (mouse) 		CTD
RGD		 PMID:12029619 PMID:19919837 PMID:22649188 PMID:25822088 PMID:26189965 More... RGD:14401586, RGD:127285675 NCBI chr 7:144,483,668...144,493,568
Ensembl chr 7:144,483,668...144,493,662 		JBrowse link
G Ccnd2 cyclin D2 severity
susceptibility
disease_progression 		ISO associated with hepatitis B
associated with Chronic Hepatitis C;DNA:SNP: :rs1049606(human)
DNA:hypermethylation:CpG site 		RGD PMID:33320844 PMID:22004425 PMID:31059558 PMID:33320844 RGD:151664743, RGD:151665169, RGD:151665109, RGD:151664743 NCBI chr 6:127,102,125...127,131,913
Ensembl chr 6:127,102,125...127,129,156 		JBrowse link
G Ccne1 cyclin E1 ameliorates ISO
IMP
IEP 		CTD Direct Evidence: marker/mechanism CTD
RGD		 PMID:12029619 PMID:22634754 PMID:17196522 PMID:29551768 PMID:28100771 RGD:2289277, RGD:153297807, RGD:127285675 NCBI chr 7:37,797,409...37,806,915
Ensembl chr 7:37,797,409...37,806,959 		JBrowse link
G Ccnf cyclin F ISO CTD Direct Evidence: marker/mechanism CTD PMID:28284560 NCBI chr17:24,441,518...24,470,333
Ensembl chr17:24,441,172...24,470,458 		JBrowse link
G Ccng1 cyclin G1 severity
treatment
disease_progression 		ISO
IMP 		protein:decreased expression:liver (human)
protein:increased expression:liver (human)
human cells in mouse model 		RGD PMID:25431954 PMID:27982046 PMID:22835824 PMID:19584283 PMID:33543294 More... RGD:151356922, RGD:151361200, RGD:151361198, RGD:151356981, RGD:151356970, RGD:151356967, RGD:151356967, RGD:151356933, RGD:151356932 NCBI chr11:40,639,379...40,646,044
Ensembl chr11:40,639,379...40,646,138 		JBrowse link
G Ccng2 cyclin G2 IMP RGD PMID:27982046 RGD:151361200 NCBI chr 5:93,415,432...93,424,090
Ensembl chr 5:93,415,116...93,424,090 		JBrowse link
G Ccr1 C-C motif chemokine receptor 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:16284949 NCBI chr 9:123,762,163...123,768,729
Ensembl chr 9:123,762,161...123,768,729 		JBrowse link
G Cd163 CD163 antigen ISO CTD Direct Evidence: marker/mechanism CTD PMID:28284560 NCBI chr 6:124,281,596...124,307,488
Ensembl chr 6:124,281,615...124,307,486 		JBrowse link
G Cd209b CD209b antigen ISO CTD Direct Evidence: marker/mechanism CTD PMID:28284560 NCBI chr 8:3,967,655...3,976,841
Ensembl chr 8:3,967,655...3,976,844 		JBrowse link
G Cd274 CD274 antigen disease_progression ISO CTD Direct Evidence: marker/mechanism
associated with hepatitis B
associated with hepatitis B 		CTD
RGD		 PMID:22396772 PMID:21912640 PMID:30267213 RGD:41410800, RGD:40818240 NCBI chr19:29,339,428...29,365,495
Ensembl chr19:29,344,855...29,365,495 		JBrowse link
G Cd276 CD276 antigen ISO CTD Direct Evidence: therapeutic CTD PMID:16217749 NCBI chr 9:58,431,581...58,463,437
Ensembl chr 9:58,431,581...58,462,720 		JBrowse link
G Cd34 CD34 antigen ISO CTD Direct Evidence: marker/mechanism CTD PMID:28284560 NCBI chr 1:194,621,239...194,643,587
Ensembl chr 1:194,621,127...194,643,587 		JBrowse link
G Cd40lg CD40 ligand IMP RGD PMID:19016771 RGD:2313413 NCBI chr  X:56,257,448...56,269,402
Ensembl chr  X:56,257,503...56,269,402 		JBrowse link
G Cd5l CD5 antigen-like ISO CTD Direct Evidence: marker/mechanism CTD PMID:28284560 NCBI chr 3:87,265,188...87,278,381
Ensembl chr 3:87,265,188...87,278,380 		JBrowse link
G Cd68 CD68 antigen severity ISO protein:increased expression:liver (human) RGD PMID:28656201 RGD:40924686 NCBI chr11:69,555,039...69,556,996
Ensembl chr11:69,555,039...69,556,979 		JBrowse link
G Cdc20 cell division cycle 20 ISO CTD Direct Evidence: marker/mechanism CTD PMID:28284560 NCBI chr 4:118,290,098...118,294,540
Ensembl chr 4:118,290,098...118,294,549 		JBrowse link
G Cdc25c cell division cycle 25C ISO CTD Direct Evidence: marker/mechanism CTD PMID:28284560 NCBI chr18:34,866,046...34,884,644
Ensembl chr18:34,866,046...34,884,586 		JBrowse link
G Cdc27 cell division cycle 27 ISO ClinVar Annotator: match by term: Hepatocellular cancer | ClinVar Annotator: match by term: Hepatocellular carcinoma ClinVar NCBI chr11:104,393,350...104,441,371
Ensembl chr11:104,393,571...104,441,446 		JBrowse link
G Cdc45 cell division cycle 45 ISO CTD Direct Evidence: marker/mechanism CTD PMID:28284560 NCBI chr16:18,599,202...18,632,371
Ensembl chr16:18,599,197...18,630,737 		JBrowse link
G Cdc6 cell division cycle 6 ISO CTD Direct Evidence: marker/mechanism CTD PMID:28284560 NCBI chr11:98,798,627...98,814,768
Ensembl chr11:98,798,627...98,814,766 		JBrowse link
G Cdca2 cell division cycle associated 2 ISO CTD Direct Evidence: marker/mechanism CTD PMID:28284560 NCBI chr14:67,910,629...67,953,290
Ensembl chr14:67,913,780...67,953,290 		JBrowse link
G Cdca3 cell division cycle associated 3 ISO CTD Direct Evidence: marker/mechanism CTD PMID:28284560 NCBI chr 6:124,806,533...124,810,664
Ensembl chr 6:124,806,510...124,810,664 		JBrowse link
G Cdca5 cell division cycle associated 5 ISO CTD Direct Evidence: marker/mechanism CTD PMID:28284560 NCBI chr19:6,135,127...6,141,803
Ensembl chr19:6,135,013...6,141,807 		JBrowse link
G Cdca8 cell division cycle associated 8 disease_progression ISO mRNA:increased expression:liver (human)
CTD Direct Evidence: marker/mechanism 		CTD
RGD		 PMID:28284560 PMID:35693827 RGD:153344586 NCBI chr 4:124,812,258...124,830,710
Ensembl chr 4:124,812,258...124,833,104 		JBrowse link
G Cdh1 cadherin 1 severity ISO
IMP 		DNA:hypermethylation
protein:decreased expression:liver
mRNA:increased expression:liver 		RGD PMID:17295234 PMID:18837082 PMID:24840851 PMID:30697077 PMID:30697077 RGD:2289638, RGD:14402047, RGD:14402046, RGD:14402045, RGD:14402045 NCBI chr 8:107,329,982...107,396,879
Ensembl chr 8:107,329,983...107,396,878 		JBrowse link
G Cdh13 cadherin 13 ISO CTD Direct Evidence: marker/mechanism CTD PMID:18425332 PMID:18553387 PMID:28284560 NCBI chr 8:119,010,150...120,051,668
Ensembl chr 8:119,010,472...120,051,660 		JBrowse link
G Cdk1 cyclin dependent kinase 1 ISO protein:increased expression:liver (human)
CTD Direct Evidence: marker/mechanism 		CTD
RGD		 PMID:28284560 PMID:19136513 RGD:2316317 NCBI chr10:69,170,976...69,188,742
Ensembl chr10:69,170,976...69,188,768 		JBrowse link
G Cdk12 cyclin dependent kinase 12 exacerbates ISO mRNA, protein:increased expression:liver (human) RGD PMID:31519701 RGD:151361172 NCBI chr11:98,093,259...98,171,941
Ensembl chr11:98,093,885...98,169,330 		JBrowse link
G Cdk13 cyclin dependent kinase 13 onset ISO DNA:amplification: : RGD PMID:22912832 RGD:155641228 NCBI chr13:17,885,309...17,979,960
Ensembl chr13:17,884,900...17,979,682 		JBrowse link
G Cdk14 cyclin dependent kinase 14 ISO CTD Direct Evidence: marker/mechanism CTD PMID:22922871 NCBI chr 5:4,853,384...5,430,650
Ensembl chr 5:4,853,391...5,470,312 		JBrowse link
G Cdk4 cyclin dependent kinase 4 treatment ISO CTD Direct Evidence: marker/mechanism CTD
RGD		 PMID:26189965 PMID:33841550 RGD:152998960 NCBI chr10:126,899,404...126,903,157
Ensembl chr10:126,899,403...126,903,789 		JBrowse link
G Cdkn1a cyclin dependent kinase inhibitor 1A IAGP OMIM:114550 MouseDO NCBI chr17:29,309,953...29,319,696
Ensembl chr17:29,309,950...29,319,701 		JBrowse link
G Cdkn1b cyclin dependent kinase inhibitor 1B ISO CTD Direct Evidence: marker/mechanism CTD PMID:20698225 NCBI chr 6:134,897,364...134,902,488
Ensembl chr 6:134,897,364...134,902,476 		JBrowse link
G Cdkn1c cyclin dependent kinase inhibitor 1C severity ISO protein:decreased expression:liver (human) RGD PMID:26606000 RGD:11354707 NCBI chr 7:143,012,076...143,014,735
Ensembl chr 7:143,012,076...143,014,787 		JBrowse link
G Cdkn2a cyclin dependent kinase inhibitor 2A severity ISO Protein:increased expression:liver
ClinVar Annotator: match by term: Hepatocellular carcinoma
CTD Direct Evidence: marker/mechanism
Protein:decreased expression:liver
DNA:hypermethylation:exon
DNA:hypermethylation:promoter 		ClinVar
CTD
RGD		 PMID:9185756 PMID:14508519 PMID:16317707 PMID:25741868 PMID:25780468 More... RGD:1600816, RGD:1600816, RGD:8552680, RGD:1600822 NCBI chr 4:89,192,710...89,212,856
Ensembl chr 4:89,192,708...89,212,890 		JBrowse link
G Cdkn2b cyclin dependent kinase inhibitor 2B ISO CTD Direct Evidence: marker/mechanism CTD PMID:33010264 NCBI chr 4:89,224,526...89,229,269
Ensembl chr 4:89,224,536...89,229,276 		JBrowse link
G Cdkn2c cyclin dependent kinase inhibitor 2C ISO CTD Direct Evidence: marker/mechanism CTD PMID:28284560 NCBI chr 4:109,518,073...109,523,953
Ensembl chr 4:109,518,073...109,524,386 		JBrowse link
G Cdkn3 cyclin dependent kinase inhibitor 3 treatment
severity 		ISO CTD Direct Evidence: marker/mechanism
associated with alcoholism; protein:increased expression:liver
protein:decreased expression:liver
mRNA:increased expression:liver 		CTD
RGD		 PMID:28284560 PMID:23292002 PMID:23292002 PMID:27314282 PMID:22390936 RGD:15090802, RGD:15090802, RGD:15090801, RGD:15090800 NCBI chr14:46,997,912...47,008,987
Ensembl chr14:46,997,998...47,009,126 		JBrowse link
G Cdt1 chromatin licensing and DNA replication factor 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:28284560 NCBI chr 8:123,294,754...123,299,869
Ensembl chr 8:123,294,754...123,300,293 		JBrowse link
G Cebpa CCAAT/enhancer binding protein alpha ISO CTD Direct Evidence: marker/mechanism CTD PMID:16288022 PMID:21785164 NCBI chr 7:34,818,718...34,821,353
Ensembl chr 7:34,818,718...34,821,353 		JBrowse link
G Cebpb CCAAT/enhancer binding protein beta ISO CTD Direct Evidence: marker/mechanism
mRNA: increased expression:liver (human) 		CTD
RGD		 PMID:14563831 PMID:30659195 RGD:40903042 NCBI chr 2:167,530,835...167,532,352
Ensembl chr 2:167,530,835...167,532,338 		JBrowse link
G Cebpd CCAAT/enhancer binding protein delta ISO CTD Direct Evidence: marker/mechanism CTD PMID:14563831 NCBI chr16:15,705,150...15,707,409
Ensembl chr16:15,705,150...15,708,895 		JBrowse link
G Celsr3 cadherin, EGF LAG seven-pass G-type receptor 3 ISO CTD Direct Evidence: marker/mechanism CTD PMID:28284560 NCBI chr 9:108,703,244...108,730,168
Ensembl chr 9:108,703,519...108,730,168 		JBrowse link
G Cenpa centromere protein A ISO CTD Direct Evidence: marker/mechanism
protein:increased expression:liver (human) 		CTD
RGD		 PMID:28284560 PMID:21956590 RGD:36947377 NCBI chr 5:30,824,214...30,832,181
Ensembl chr 5:30,824,121...30,832,174 		JBrowse link
G Cenpe centromere protein E ISO CTD Direct Evidence: marker/mechanism CTD PMID:28284560 NCBI chr 3:134,918,324...134,979,301
Ensembl chr 3:134,918,298...134,979,372 		JBrowse link
G Cenpf centromere protein F ISO CTD Direct Evidence: marker/mechanism CTD PMID:28284560 NCBI chr 1:189,372,803...189,420,302
Ensembl chr 1:189,372,803...189,420,283 		JBrowse link
G Cenpm centromere protein M ISO CTD Direct Evidence: marker/mechanism CTD PMID:28284560 NCBI chr15:82,115,694...82,128,974
Ensembl chr15:82,117,980...82,128,949 		JBrowse link
G Cenpu centromere protein U ISO CTD Direct Evidence: marker/mechanism CTD PMID:28284560 NCBI chr 8:47,005,054...47,033,603
Ensembl chr 8:47,005,063...47,033,042 		JBrowse link
G Cenpw centromere protein W ISO CTD Direct Evidence: marker/mechanism CTD PMID:28284560 NCBI chr10:30,072,005...30,076,599
Ensembl chr10:30,070,565...30,076,556 		JBrowse link
G Cep131 centrosomal protein 131 ISO CTD Direct Evidence: marker/mechanism CTD PMID:28284560 NCBI chr11:119,955,247...119,977,684
Ensembl chr11:119,955,256...119,977,653 		JBrowse link
G Cep164 centrosomal protein 164 susceptibility ISO associated with Chronic Hepatitis C;DNA:SNP: :rs573455 (human) RGD PMID:22004425 RGD:151665169 NCBI chr 9:45,678,244...45,739,984
Ensembl chr 9:45,678,244...45,739,989 		JBrowse link
G Cep55 centrosomal protein 55 ISO CTD Direct Evidence: marker/mechanism CTD PMID:28284560 NCBI chr19:38,043,423...38,062,873
Ensembl chr19:38,043,459...38,062,871 		JBrowse link
G Ces1d carboxylesterase 1D disease_progression ISO protein:decreased expression:liver (human)
associated with tumor vascularization; protein:decreased expression:liver tumor (human)
mRNA, protein:decreased expression:liver tumor (human) 		RGD PMID:24259486 PMID:30901224 PMID:19658107 RGD:152995276, RGD:152995286, RGD:152995279 NCBI chr 8:93,892,700...93,924,432
Ensembl chr 8:93,892,696...93,924,466 		JBrowse link
G Cfp complement factor properdin ISO CTD Direct Evidence: marker/mechanism CTD PMID:28284560 NCBI chr  X:20,791,693...20,797,794
Ensembl chr  X:20,791,693...20,797,794 		JBrowse link
G Chaf1b chromatin assembly factor 1, subunit B ISO CTD Direct Evidence: marker/mechanism CTD PMID:28284560 NCBI chr16:93,680,801...93,703,003
Ensembl chr16:93,680,789...93,703,003 		JBrowse link
G Chd4 chromodomain helicase DNA binding protein 4 exacerbates ISO mRNA:increased expression:liver (human)
protein:increased expression:liver (human) 		RGD PMID:28486105 PMID:26095183 RGD:153323299, RGD:11571740 NCBI chr 6:125,073,144...125,107,554
Ensembl chr 6:125,072,944...125,107,554 		JBrowse link
G Chd5 chromodomain helicase DNA binding protein 5 ISO mRNA:decreased expression:liver RGD PMID:26517514 RGD:11537550 NCBI chr 4:152,423,103...152,474,651
Ensembl chr 4:152,423,108...152,474,651 		JBrowse link
G Ckap2l cytoskeleton associated protein 2-like ISO CTD Direct Evidence: marker/mechanism CTD PMID:28284560 NCBI chr 2:129,110,130...129,139,148
Ensembl chr 2:129,110,130...129,139,132 		JBrowse link
G Ckap4 cytoskeleton-associated protein 4 disease_progression ISO associated with tumor vascularization; mRNA,protein:increased expression:liver tumor (human) RGD PMID:30901224 RGD:152995286 NCBI chr10:84,362,169...84,369,752
Ensembl chr10:84,362,169...84,369,926 		JBrowse link
G Cldn1 claudin 1 severity IEP protein:increased expression:liver (human)
associated with liver cirrhosis;protein:increased expression:liver (human)
protein:decreased expression:liver (human) 		RGD PMID:24815833 PMID:24696415 PMID:17270214 RGD:26884345, RGD:26884352, RGD:26884348 NCBI chr16:26,175,395...26,190,589
Ensembl chr16:26,175,392...26,190,591 		JBrowse link
G Clec1b C-type lectin domain family 1, member b ISO CTD Direct Evidence: marker/mechanism CTD PMID:28284560 NCBI chr 6:129,374,260...129,382,376
Ensembl chr 6:129,374,260...129,386,298 		JBrowse link
G Clec4g C-type lectin domain family 4, member g ISO CTD Direct Evidence: marker/mechanism CTD PMID:28284560 NCBI chr 8:3,757,066...3,770,695
Ensembl chr 8:3,757,064...3,770,651 		JBrowse link
G Clptm1l CLPTM1-like susceptibility
disease_progression 		ISO DNA:SNPs::rs401681(human)
DNA:SNP: :rs401681(human) 		RGD PMID:25339005 PMID:29042796 RGD:150530496, RGD:150537100 NCBI chr13:73,752,121...73,768,758
Ensembl chr13:73,752,125...73,768,724 		JBrowse link
G Cltrn collectrin, amino acid transport regulator ISO CTD Direct Evidence: marker/mechanism CTD PMID:28284560 NCBI chr  X:162,873,183...162,901,855
Ensembl chr  X:162,871,826...162,901,856 		JBrowse link
G Cndp1 carnosine dipeptidase 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:28284560 NCBI chr18:84,628,509...84,668,359
Ensembl chr18:84,628,634...84,668,220 		JBrowse link
G Cntnap4 contactin associated protein-like 4 ISO CTD Direct Evidence: marker/mechanism CTD PMID:28284560 NCBI chr 8:113,296,523...113,609,339
Ensembl chr 8:113,296,675...113,609,349 		JBrowse link
G Col15a1 collagen, type XV, alpha 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:28284560 NCBI chr 4:47,207,744...47,313,165
Ensembl chr 4:47,208,161...47,313,167 		JBrowse link
G Col18a1 collagen, type XVIII, alpha 1 severity ISO Protein:increased expression RGD PMID:15739185 RGD:1600906 NCBI chr10:76,888,013...77,002,351
Ensembl chr10:76,888,012...77,002,382 		JBrowse link
G Colec10 collectin sub-family member 10 ISO CTD Direct Evidence: marker/mechanism CTD PMID:28284560 NCBI chr15:54,274,170...54,329,755
Ensembl chr15:54,274,170...54,329,754 		JBrowse link
G Comt catechol-O-methyltransferase ISO CTD Direct Evidence: marker/mechanism CTD PMID:15341023 NCBI chr16:18,225,632...18,247,006
Ensembl chr16:18,225,636...18,245,602 		JBrowse link
G Cops5 COP9 signalosome subunit 5 severity ISO CTD Direct Evidence: marker/mechanism
protein:increased expression:liver (human) 		CTD
RGD		 PMID:20698225 PMID:26606000 RGD:11354707 NCBI chr 1:10,094,825...10,108,384
Ensembl chr 1:10,094,826...10,108,393 		JBrowse link
G Cox7b2 cytochrome c oxidase subunit 7B2 ISO CTD Direct Evidence: marker/mechanism CTD PMID:28284560 NCBI chr 5:71,600,166...71,705,548
Ensembl chr 5:71,600,167...71,705,548 		JBrowse link
G Cp ceruloplasmin ISO CTD Direct Evidence: marker/mechanism CTD PMID:19229483 NCBI chr 3:20,011,097...20,063,914
Ensembl chr 3:20,011,218...20,063,309 		JBrowse link
G Cpeb3 cytoplasmic polyadenylation element binding protein 3 ISO CTD Direct Evidence: marker/mechanism CTD PMID:28284560 NCBI chr19:36,996,742...37,185,018
Ensembl chr19:36,998,691...37,186,000 		JBrowse link
G Cps1 carbamoyl-phosphate synthetase 1 disease_progression ISO associated with tumor vascularization; mRNA,protein:decreased expression:liver tumor (human) RGD PMID:30901224 RGD:152995286 NCBI chr 1:67,151,294...67,270,426
Ensembl chr 1:67,162,185...67,270,418 		JBrowse link
G Crebbp CREB binding protein ISO ClinVar Annotator: match by term: Hepatocellular cancer | ClinVar Annotator: match by term: LIVER CELL CARCINOMA ClinVar PMID:21390126 PMID:21680795 PMID:21796119 PMID:22832583 PMID:23334668 More... NCBI chr16:3,899,198...4,031,864
Ensembl chr16:3,899,192...4,031,861 		JBrowse link
G Crhbp corticotropin releasing hormone binding protein ISO CTD Direct Evidence: marker/mechanism CTD PMID:28284560 NCBI chr13:95,567,884...95,581,339
Ensembl chr13:95,567,879...95,581,432 		JBrowse link
G Crp C-reactive protein, pentraxin-related ISO CTD Direct Evidence: marker/mechanism CTD PMID:19363144 NCBI chr 1:172,525,623...172,527,533
Ensembl chr 1:172,525,622...172,660,598 		JBrowse link
G Csf1r colony stimulating factor 1 receptor severity
exacerbates 		ISO DNA:hypomethylation:promoter (human)
protein:increased expression:liver (human)
protein:increased expression: liver (human) 		RGD PMID:32724427 PMID:14969845 PMID:11412385 PMID:32760707 RGD:150524282, RGD:150524302, RGD:150524301, RGD:150524286 NCBI chr18:61,238,644...61,264,211
Ensembl chr18:61,233,670...61,265,221 		JBrowse link
G Csf2 colony stimulating factor 2 (granulocyte-macrophage) treatment IMP RGD PMID:12731087 RGD:10450243 NCBI chr11:54,138,096...54,140,725
Ensembl chr11:54,138,097...54,140,493 		JBrowse link
G Csk c-src tyrosine kinase ISO protein:decreased expression:liver RGD PMID:9918913 RGD:5134372 NCBI chr 9:57,533,929...57,560,758
Ensembl chr 9:57,533,929...57,560,914 		JBrowse link
G Csmd1 CUB and Sushi multiple domains 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:28284560 NCBI chr 8:15,942,538...17,586,908
Ensembl chr 8:15,942,537...17,585,602 		JBrowse link
G Cspg4 chondroitin sulfate proteoglycan 4 ISO CTD Direct Evidence: marker/mechanism CTD PMID:28284560 NCBI chr 9:56,772,388...56,807,154
Ensembl chr 9:56,772,317...56,807,154 		JBrowse link
G Csrnp1 cysteine-serine-rich nuclear protein 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:28284560 NCBI chr 9:119,800,229...119,813,808
Ensembl chr 9:119,800,229...119,813,724 		JBrowse link
G Ctla4 cytotoxic T-lymphocyte-associated protein 4 susceptibility ISO protein:increased expression:CD4+ and CD8+ T cells:
DNA:SNPs: :rs231775,rs231725(human) 		RGD PMID:28648905 PMID:23432218 RGD:14398741, RGD:14398742 NCBI chr 1:60,948,184...60,954,991
Ensembl chr 1:60,926,159...60,954,991 		JBrowse link
G Ctnnb1 catenin beta 1 exacerbates
severity
susceptibility 		ISO DNA:mutation:exon 3
ClinVar Annotator: match by term: Hepatocellular cancer | ClinVar Annotator: match by term: Hepatocellular carcinoma
ClinVar Annotator: match by term: AXIN1-related condition | ClinVar Annotator: match by term: Hepatocellular cancer | ClinVar Annotator: match by term: Hepatocellular carcinoma
ClinVar Annotator: match by term: Hepatocellular cancer | ClinVar Annotator: match by term: Hepatocellular carcinoma | ClinVar Annotator: match by term: LIVER CELL CARCINOMA
DNA:missense mutations:exon 3:multiple (human)
DNA:Mutations:exon:
protein:increased expression:liver:
associated with hepatitis B;DNA:SNPs: :rs3864004,rs11564475(human)
associated with Hepatitis B, Chronic,DNA:SNP, haplotype: :rs3864004 (human)
CTD Direct Evidence: marker/mechanism 		ClinVar
CTD
OMIM
RGD		 PMID:9065402 PMID:9065403 PMID:9294210 PMID:9500465 PMID:9927029 More... RGD:734850, RGD:150429592, RGD:14402052, RGD:14402052, RGD:14402040, RGD:14402039 NCBI chr 9:120,762,466...120,789,573
Ensembl chr 9:120,758,282...120,789,573 		JBrowse link
G Ctsb cathepsin B ISO RGD PMID:15641152 RGD:2315605 NCBI chr14:63,359,911...63,383,372
Ensembl chr14:63,359,911...63,383,372 		JBrowse link
G Ctsd cathepsin D ISO CTD Direct Evidence: marker/mechanism CTD PMID:21472284 NCBI chr 7:141,929,647...141,941,564
Ensembl chr 7:141,929,648...141,941,775 		JBrowse link
G Ctsl cathepsin L ISO RGD PMID:15641152 RGD:2315605 NCBI chr13:64,509,704...64,518,586
Ensembl chr13:64,507,151...64,518,704 		JBrowse link
G Cux1 cut-like homeobox 1 ISO mRNA:increased expression:liver (human) RGD PMID:30561038 RGD:152985541 NCBI chr 5:136,276,989...136,596,429
Ensembl chr 5:136,276,989...136,596,344 		JBrowse link
G Cxcl10 C-X-C motif chemokine ligand 10 disease_progression
treatment 		ISO
IDA 		RGD PMID:28592115 PMID:27245433 PMID:28638480 RGD:27095889, RGD:27095899, RGD:27095898 NCBI chr 5:92,494,497...92,496,748
Ensembl chr 5:92,494,497...92,496,748 		JBrowse link
G Cxcl11 chemokine (C-X-C motif) ligand 11 IEP mRNA:increased expression:liver (mouse) RGD PMID:26569409 RGD:11344640 NCBI chr 5:92,507,403...92,511,155
Ensembl chr 5:92,507,403...92,513,344 		JBrowse link
G Cxcl12 C-X-C motif chemokine ligand 12 ISO CTD Direct Evidence: marker/mechanism CTD PMID:19363144 PMID:28284560 NCBI chr 6:117,145,496...117,158,329
Ensembl chr 6:117,145,496...117,158,328 		JBrowse link
G Cxcl14 C-X-C motif chemokine ligand 14 ISO CTD Direct Evidence: marker/mechanism CTD PMID:28284560 NCBI chr13:56,436,456...56,444,624
Ensembl chr13:56,436,456...56,444,364 		JBrowse link
G Cxcl15 C-X-C motif chemokine ligand 15 disease_progression
susceptibility 		ISO protein:increased expression:liver (human)
CTD Direct Evidence: marker/mechanism|therapeutic
DNA:SNPs, haplotype:multiple
mRNA:increased expression:liver (human) 		CTD
RGD		 PMID:12432545 PMID:35776891 PMID:26078356 PMID:24381110 PMID:30523154 RGD:11526468, RGD:26884366, RGD:26884364 NCBI chr 5:90,942,393...90,950,926
Ensembl chr 5:90,942,393...90,950,926 		JBrowse link
G Cxcr4 C-X-C motif chemokine receptor 4 treatment
severity 		ISO human cells in mouse model
protein:increased expression:liver (human) 		RGD PMID:30034941 PMID:33574707 RGD:151665331, RGD:151665327 NCBI chr 1:128,515,936...128,520,036
Ensembl chr 1:128,515,936...128,520,030 		JBrowse link
G Cyld CYLD lysine 63 deubiquitinase ISO CTD Direct Evidence: marker/mechanism CTD PMID:21109933 NCBI chr 8:89,423,506...89,478,574
Ensembl chr 8:89,423,675...89,478,573 		JBrowse link
G Cyp17a1 cytochrome P450, family 17, subfamily a, polypeptide 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:15341023 NCBI chr19:46,655,604...46,661,439
Ensembl chr19:46,655,604...46,661,611 		JBrowse link
G Cyp1a1 cytochrome P450, family 1, subfamily a, polypeptide 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:15341023 NCBI chr 9:57,595,211...57,611,107
Ensembl chr 9:57,595,211...57,611,107 		JBrowse link
G Cyp1a2 cytochrome P450, family 1, subfamily a, polypeptide 2 ISO CTD Direct Evidence: marker/mechanism CTD PMID:28284560 NCBI chr 9:57,584,220...57,590,938
Ensembl chr 9:57,584,220...57,590,986 		JBrowse link
G Cyp26b1 cytochrome P450, family 26, subfamily b, polypeptide 1 disease_progression ISO mRNA:increased expression:liver (human) RGD PMID:35693827 RGD:153344586 NCBI chr 6:84,548,396...84,570,890
Ensembl chr 6:84,548,396...84,570,890 		JBrowse link
G Cyp2b10 cytochrome P450, family 2, subfamily b, polypeptide 10 ISO CTD Direct Evidence: marker/mechanism CTD PMID:28284560 NCBI chr 7:25,597,083...25,626,049
Ensembl chr 7:25,597,045...25,626,049 		JBrowse link
G Cyp2c29 cytochrome P450, family 2, subfamily c, polypeptide 29 ISO CTD Direct Evidence: marker/mechanism CTD PMID:28284560 NCBI chr19:39,275,541...39,319,157
Ensembl chr19:39,257,849...39,319,157 		JBrowse link
G Cyp2c38 cytochrome P450, family 2, subfamily c, polypeptide 38 susceptibility ISO associated with hepatitis C; DNA:polymorphisms: : RGD PMID:11021356 RGD:124713413 NCBI chr19:39,379,109...39,451,519
Ensembl chr19:39,378,000...39,451,519 		JBrowse link
G Cyp2e1 cytochrome P450, family 2, subfamily e, polypeptide 1 ISO CTD Direct Evidence: marker/mechanism
DNA, mRNA:SNP, Decreased expression:liver: rs2031920 (human)
associated with alcohol dependence 		CTD
RGD		 PMID:15162526 PMID:29765251 PMID:20364586 RGD:14700899, RGD:14700882 NCBI chr 7:140,343,732...140,354,903
Ensembl chr 7:140,343,652...140,354,900 		JBrowse link
G Cyp39a1 cytochrome P450, family 39, subfamily a, polypeptide 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:28284560 NCBI chr17:43,978,263...44,062,322
Ensembl chr17:43,978,316...44,062,322 		JBrowse link
G Dab2ip disabled 2 interacting protein severity ISO mRNA:decreased expression:liver (human)
protein:decreased expression:liver (human) 		RGD PMID:31176165 PMID:22168621 RGD:151665110, RGD:151665148 NCBI chr 2:35,448,285...35,621,006
Ensembl chr 2:35,448,278...35,621,006 		JBrowse link
G Dbh dopamine beta hydroxylase ISO CTD Direct Evidence: marker/mechanism CTD PMID:28284560 NCBI chr 2:27,055,519...27,073,216
Ensembl chr 2:27,055,245...27,073,212 		JBrowse link
G Dcn decorin ISO CTD Direct Evidence: marker/mechanism CTD PMID:28284560 NCBI chr10:97,315,362...97,354,025
Ensembl chr10:97,315,471...97,354,005 		JBrowse link
G Ddr1 discoidin domain receptor family, member 1 severity IMP
ISO 		mRNA:increased expression:liver (human) RGD PMID:33173221 PMID:33173221 RGD:151347691, RGD:151347691 NCBI chr17:35,992,459...36,015,633
Ensembl chr17:35,992,459...36,015,513 		JBrowse link
G Ddr2 discoidin domain receptor family, member 2 treatment
disease_progression 		ISO RGD PMID:33969575 PMID:26362312 RGD:150429748, RGD:11086753 NCBI chr 1:169,799,874...169,938,525
Ensembl chr 1:169,799,876...169,938,331 		JBrowse link
G Ddx3x DEAD box helicase 3, X-linked exacerbates
sexual_dimorphism 		IMP
ISO 		associated with hepatitis B; mRNA,protein:decreased expression:liver (human) RGD PMID:30297359 PMID:16301996 RGD:151356499, RGD:151356660 NCBI chr  X:13,147,261...13,160,222
Ensembl chr  X:13,147,209...13,160,291 		JBrowse link
G Depdc1a DEP domain containing 1a ISO CTD Direct Evidence: marker/mechanism CTD PMID:28284560 NCBI chr 3:159,201,042...159,235,690
Ensembl chr 3:159,201,070...159,235,592 		JBrowse link
G Depdc1b DEP domain containing 1B ISO CTD Direct Evidence: marker/mechanism CTD PMID:28284560 NCBI chr13:108,452,592...108,526,100
Ensembl chr13:108,452,866...108,544,316 		JBrowse link
G Depdc5 DEP domain containing 5 ISO CTD Direct Evidence: marker/mechanism CTD PMID:21725309 NCBI chr 5:33,020,996...33,151,581
Ensembl chr 5:33,021,045...33,151,580 		JBrowse link
G Dhfr dihydrofolate reductase ISO ClinVar Annotator: match by term: Hepatocellular cancer ClinVar PMID:28492532 NCBI chr13:92,491,291...92,525,561
Ensembl chr13:92,491,234...92,525,561 		JBrowse link
G Dicer1 dicer 1, ribonuclease type III susceptibility ISO associated with hepatitis B; DNA:SNP: :rs1057035 T>C (human) RGD PMID:23868705 RGD:149735346 NCBI chr12:104,654,001...104,718,331
Ensembl chr12:104,654,001...104,718,211 		JBrowse link
G Dipk2b divergent protein kinase domain 2B ISO CTD Direct Evidence: marker/mechanism CTD PMID:28284560 NCBI chr  X:18,280,406...18,327,657
Ensembl chr  X:18,281,120...18,327,636 		JBrowse link
G Dlgap5 DLG associated protein 5 ISO CTD Direct Evidence: marker/mechanism CTD PMID:28284560 NCBI chr14:47,625,238...47,655,657
Ensembl chr14:47,625,236...47,655,864 		JBrowse link
G Dlk1 delta like non-canonical Notch ligand 1 IEP mRNA:increased expression:liver (mouse) RGD PMID:26569409 RGD:11344640 NCBI chr12:109,418,411...109,429,262
Ensembl chr12:109,418,749...109,429,262 		JBrowse link
G Dmgdh dimethylglycine dehydrogenase precursor disease_progression ISO associated with tumor vascularization; mRNA,protein:decreased expression:liver tumor (human) RGD PMID:30901224 RGD:152995286 NCBI chr13:93,810,944...93,889,331
Ensembl chr13:93,810,941...93,889,341 		JBrowse link
G Dnajc6 DnaJ heat shock protein family (Hsp40) member C6 ISO CTD Direct Evidence: marker/mechanism CTD PMID:28284560 NCBI chr 4:101,353,751...101,499,996
Ensembl chr 4:101,353,828...101,499,996 		JBrowse link
G Dnase1l3 deoxyribonuclease 1-like 3 ISO CTD Direct Evidence: marker/mechanism CTD PMID:28284560 NCBI chr14:14,475,014...14,504,586
Ensembl chr14:14,475,200...14,505,240 		JBrowse link
G Dnmt1 DNA methyltransferase 1 ISO mRNA, protein:increased expression:liver RGD PMID:11844796 RGD:2289670 NCBI chr 9:20,818,501...20,871,084
Ensembl chr 9:20,818,505...20,871,184 		JBrowse link
G Dnmt3a DNA methyltransferase 3A ISO protein:increased expression:liver:
mRNA, protein:increased expression:liver 		RGD PMID:15885882 PMID:11844796 RGD:9588598, RGD:2289670 NCBI chr12:3,851,559...3,964,442
Ensembl chr12:3,856,007...3,964,443 		JBrowse link
G Dnmt3b DNA methyltransferase 3B ISO mRNA:increased expression:liver:
mRNA, protein:increased expression:liver 		RGD PMID:15885882 PMID:11844796 RGD:9588598, RGD:2289670 NCBI chr 2:153,491,332...153,529,650
Ensembl chr 2:153,491,370...153,529,650 		JBrowse link
G Dpyd dihydropyrimidine dehydrogenase ISO CTD Direct Evidence: marker/mechanism CTD PMID:18019677 NCBI chr 3:118,355,758...119,226,573
Ensembl chr 3:118,355,778...119,226,573 		JBrowse link
G Dsn1 DSN1 homolog, MIS12 kinetochore complex component disease_progression ISO RGD PMID:30136646 RGD:27372884 NCBI chr 2:156,836,982...156,848,995
Ensembl chr 2:156,837,185...156,849,074 		JBrowse link
G Dtl denticleless E3 ubiquitin protein ligase ISO CTD Direct Evidence: marker/mechanism CTD PMID:28284560 NCBI chr 1:191,269,468...191,307,656
Ensembl chr 1:191,269,468...191,307,656 		JBrowse link
G Dynlrb1 dynein light chain roadblock-type 1 ISO RGD PMID:11750132 RGD:13208527 NCBI chr 2:155,078,453...155,092,197
Ensembl chr 2:155,078,453...155,092,197 		JBrowse link
G Dynlrb2 dynein light chain roadblock-type 2 ISO RGD PMID:11750132 RGD:13208527 NCBI chr 8:117,231,754...117,242,654
Ensembl chr 8:117,231,713...117,242,654 		JBrowse link
G E2f1 E2F transcription factor 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:12029619 PMID:15565109 PMID:28284560 NCBI chr 2:154,401,320...154,411,812
Ensembl chr 2:154,401,327...154,411,812 		JBrowse link
G E2f8 E2F transcription factor 8 ISO CTD Direct Evidence: marker/mechanism CTD PMID:28284560 NCBI chr 7:48,516,177...48,531,821
Ensembl chr 7:48,516,177...48,531,344 		JBrowse link
G Eaf2 ELL associated factor 2 ISO CTD Direct Evidence: marker/mechanism CTD PMID:20564326 NCBI chr16:36,613,246...36,695,275
Ensembl chr16:36,613,246...36,695,365 		JBrowse link
G Ecm1 extracellular matrix protein 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:28284560 NCBI chr 3:95,641,459...95,646,880
Ensembl chr 3:95,641,459...95,646,881 		JBrowse link
G Ect2 ect2 oncogene ISO CTD Direct Evidence: marker/mechanism CTD PMID:28284560 NCBI chr 3:27,151,371...27,207,971
Ensembl chr 3:27,151,371...27,208,027 		JBrowse link
G Eef2 eukaryotic translation elongation factor 2 exacerbates ISO protein:increased expression, increased phosphorylation:liver (human) RGD PMID:28060762 RGD:153298915 NCBI chr10:81,012,465...81,018,343
Ensembl chr10:81,012,465...81,018,332 		JBrowse link
G Efemp1 epidermal growth factor-containing fibulin-like extracellular matrix protein 1 disease_progression ISO protein:decreased expression:liver: RGD PMID:23936443 RGD:10401793 NCBI chr11:28,803,154...28,876,743
Ensembl chr11:28,803,204...28,876,743 		JBrowse link
G Eftud2 elongation factor Tu GTP binding domain containing 2 severity
ameliorates 		ISO RGD PMID:34282556 PMID:34282556 RGD:155791664, RGD:155791664 NCBI chr11:102,729,298...102,771,999
Ensembl chr11:102,729,299...102,771,811 		JBrowse link
G Egf epidermal growth factor susceptibility ISO CTD Direct Evidence: marker/mechanism
associated with hepatitis B;DNA:SNP:exon: (rs11569017) (human)
associated with liver cirrhosis;DNA:SNP:5'UTR: (rs4444903) (human) 		CTD
RGD		 PMID:9029167 PMID:23790025 PMID:18167406 RGD:14695014, RGD:14695013 NCBI chr 3:129,471,223...129,548,971
Ensembl chr 3:129,471,214...129,548,965 		JBrowse link
G Egfr epidermal growth factor receptor disease_progression ISO CTD Direct Evidence: marker/mechanism CTD
RGD		 PMID:9029167 PMID:11355950 RGD:126781769 NCBI chr11:16,700,153...16,868,158
Ensembl chr11:16,702,203...16,868,158 		JBrowse link
G Egr1 early growth response 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:28284560 NCBI chr18:34,994,260...34,998,009
Ensembl chr18:34,992,876...34,998,037 		JBrowse link
G Egr2 early growth response 2 ISO CTD Direct Evidence: marker/mechanism CTD PMID:28284560 NCBI chr10:67,370,334...67,383,354
Ensembl chr10:67,371,305...67,378,018 		JBrowse link
G Ehd3 EH-domain containing 3 ISO CTD Direct Evidence: marker/mechanism CTD PMID:28284560 NCBI chr17:74,111,836...74,139,088
Ensembl chr17:74,111,129...74,139,089 		JBrowse link
G Eif3h eukaryotic translation initiation factor 3, subunit H ISO CTD Direct Evidence: marker/mechanism CTD PMID:14578863 NCBI chr15:51,649,956...51,728,901
Ensembl chr15:51,649,954...51,728,919 		JBrowse link
G Enah ENAH actin regulator disease_progression ISO mRNA:increased expression:liver (human) RGD PMID:35030977 RGD:155791678 NCBI chr 1:181,723,949...181,848,132
Ensembl chr 1:181,723,949...181,847,555 		JBrowse link
G Eng endoglin ISO protein:increased expression:liver (rat) RGD PMID:20368095 RGD:7257538 NCBI chr 2:32,536,607...32,572,681
Ensembl chr 2:32,536,607...32,572,681 		JBrowse link
G Eno1 enolase 1, alpha non-neuron ISO CTD Direct Evidence: marker/mechanism CTD PMID:21472284 NCBI chr 4:150,321,165...150,333,336
Ensembl chr 4:150,321,178...150,333,336
Ensembl chr18:150,321,178...150,333,336 		JBrowse link
G Ep300 E1A binding protein p300 ISO protein:increased expression:liver (rat) RGD PMID:17083329 RGD:2312274 NCBI chr15:81,470,329...81,536,273
Ensembl chr15:81,469,552...81,536,278 		JBrowse link
G Epas1 endothelial PAS domain protein 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:26735578 NCBI chr17:87,061,292...87,140,838
Ensembl chr17:87,061,128...87,140,838 		JBrowse link
G Epcam epithelial cell adhesion molecule severity ISO protein:increased expression:liver RGD PMID:24616575 RGD:14695007 NCBI chr17:87,943,407...87,958,555
Ensembl chr17:87,943,407...87,958,557 		JBrowse link
G Ephb1 Eph receptor B1 IEP protein:increased phosphorylation:liver (mouse) RGD PMID:28100771 RGD:127285675 NCBI chr 9:101,799,327...102,231,892
Ensembl chr 9:101,799,327...102,231,892 		JBrowse link
G Ephx1 epoxide hydrolase 1, microsomal ISO CTD Direct Evidence: marker/mechanism CTD PMID:7892276 NCBI chr 1:180,817,121...180,845,134
Ensembl chr 1:180,803,775...180,848,469 		JBrowse link
G Epo erythropoietin disease_progression ISO mRNA:increased expression:liver (human) RGD PMID:35693827 RGD:153344586 NCBI chr 5:137,481,282...137,484,078
Ensembl chr 5:137,481,282...137,531,504 		JBrowse link
G Eps8l3 EPS8-like 3 ISO CTD Direct Evidence: marker/mechanism CTD PMID:28284560 NCBI chr 3:107,781,177...107,800,216
Ensembl chr 3:107,784,545...107,800,216 		JBrowse link
G Erbb3 erb-b2 receptor tyrosine kinase 3 disease_progression ISO RGD PMID:11355950 RGD:126781769 NCBI chr10:128,403,392...128,425,504
Ensembl chr10:128,403,392...128,425,521 		JBrowse link
G Erbb4 erb-b2 receptor tyrosine kinase 4 ISO DNA:insertion/deletion:3'UTR:rs6147150 (human) RGD PMID:22294845 RGD:126781763 NCBI chr 1:68,071,063...69,147,756
Ensembl chr 1:68,071,345...69,147,218 		JBrowse link
G Ercc1 excision repair cross-complementing rodent repair deficiency, complementation group 1 ISO mRNA, protein:increased expression:liver (human) RGD PMID:15922480 RGD:155598683 NCBI chr 7:19,079,016...19,090,449
Ensembl chr 7:19,078,703...19,090,449 		JBrowse link
G Ercc2 excision repair cross-complementing rodent repair deficiency, complementation group 2 susceptibility
disease_progression 		ISO DNA:SNPs:exon 23: p.K751Q (human)
DNA:SNP:cd: 312A>G (human)
DNA:SNPs:exon 23: p.K751Q (rs13181) (human)
DNA:SNPs:exon 23: p.K751Q (human) 		RGD PMID:19919686 PMID:28927037 PMID:28598207 PMID:25531380 RGD:25671459, RGD:150530503, RGD:25671461, RGD:25671460 NCBI chr 7:19,115,942...19,129,619
Ensembl chr 7:19,115,935...19,129,619 		JBrowse link
G Ereg epiregulin ISO CTD Direct Evidence: marker/mechanism CTD PMID:35776891 NCBI chr 5:91,222,476...91,241,508
Ensembl chr 5:91,222,481...91,241,505 		JBrowse link
G Ern1 endoplasmic reticulum to nucleus signalling 1 ISO DNA:hypomethylation: CpG islands: RGD PMID:20165882 RGD:14694974 NCBI chr11:106,285,474...106,378,701
Ensembl chr11:106,285,476...106,378,678 		JBrowse link
G Erp29 endoplasmic reticulum protein 29 ISO CTD Direct Evidence: marker/mechanism CTD PMID:21472284 NCBI chr 5:121,582,816...121,590,537
Ensembl chr 5:121,566,653...121,590,569 		JBrowse link
G Esm1 endothelial cell-specific molecule 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:28284560 NCBI chr13:113,346,193...113,354,638
Ensembl chr13:113,346,193...113,354,632 		JBrowse link
G Esr1 estrogen receptor 1 (alpha) ISO CTD Direct Evidence: marker/mechanism CTD PMID:19363144 PMID:28284560 NCBI chr10:4,561,989...4,955,633
Ensembl chr10:4,561,593...4,955,614 		JBrowse link
G Etfa electron transferring flavoprotein, alpha polypeptide ISO CTD Direct Evidence: marker/mechanism CTD PMID:21472284 NCBI chr 9:55,361,720...55,419,528
Ensembl chr 9:55,361,792...55,419,527 		JBrowse link
G Exo1 exonuclease 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:28284560 NCBI chr 1:175,708,334...175,738,962
Ensembl chr 1:175,708,147...175,741,055 		JBrowse link
G Ezh2 enhancer of zeste 2 polycomb repressive complex 2 subunit susceptibility ISO mRNA:increased expression:liver (human)
CTD Direct Evidence: marker/mechanism
DNA:SNPs: :multiple 		CTD
RGD		 PMID:28284560 PMID:34545456 PMID:24211739 PMID:25226601 PMID:24040354 More... RGD:10755339, RGD:126779608, RGD:126779595, RGD:11537550 NCBI chr 6:47,507,208...47,613,843
Ensembl chr 6:47,507,073...47,572,275 		JBrowse link
G F2 coagulation factor II severity ISO CTD Direct Evidence: marker/mechanism
associated with liver cirrhosis;protein:altered expression, altered processing:liver (human) 		CTD
RGD		 PMID:2821104 PMID:7620113 RGD:14975114 NCBI chr 2:91,442,742...91,466,799
Ensembl chr 2:91,455,665...91,466,759 		JBrowse link
G Fabp5 fatty acid binding protein 5, epidermal ISO CTD Direct Evidence: marker/mechanism CTD PMID:21472284 NCBI chr 3:10,077,645...10,081,670
Ensembl chr 3:10,077,608...10,081,667 		JBrowse link
G Fam180a family with sequence similarity 180, member A ISO CTD Direct Evidence: marker/mechanism CTD PMID:28284560 NCBI chr 6:35,289,678...35,303,076
Ensembl chr 6:35,289,603...35,303,076 		JBrowse link
G Fam83d family with sequence similarity 83, member D ISO CTD Direct Evidence: marker/mechanism CTD PMID:28284560 NCBI chr 2:158,610,011...158,628,557
Ensembl chr 2:158,610,013...158,628,557 		JBrowse link
G Fancd2 Fanconi anemia, complementation group D2 ISO CTD Direct Evidence: marker/mechanism CTD PMID:28284560 NCBI chr 6:113,508,622...113,573,981
Ensembl chr 6:113,508,643...113,573,978 		JBrowse link
G Fanci Fanconi anemia, complementation group I ISO CTD Direct Evidence: marker/mechanism CTD PMID:28284560 NCBI chr 7:79,042,056...79,100,013
Ensembl chr 7:79,041,677...79,100,012 		JBrowse link
G Fas Fas cell surface death receptor treatment ISO
IMP 		protein:increased expression:liver: RGD PMID:29634416 PMID:30737368 PMID:11274632 RGD:13792608, RGD:14700700, RGD:14700677 NCBI chr19:34,267,926...34,305,175
Ensembl chr19:34,268,066...34,305,172 		JBrowse link
G Fasl Fas ligand ISO protein:increased expression:liver: RGD PMID:11274632 RGD:14700677 NCBI chr 1:161,608,260...161,616,064
Ensembl chr 1:161,608,258...161,616,064 		JBrowse link
G Fasn fatty acid synthase ISO CTD Direct Evidence: marker/mechanism CTD PMID:14563831 PMID:15543204 PMID:21147110 NCBI chr11:120,696,784...120,715,992
Ensembl chr11:120,696,672...120,715,373 		JBrowse link
G Fat1 FAT atypical cadherin 1 disease_progression ISO mRNA,protein:increased expression:liver (human) RGD PMID:24590895 RGD:151347630 NCBI chr 8:45,386,137...45,505,294
Ensembl chr 8:45,388,484...45,505,294 		JBrowse link
G Fate1 fetal and adult testis expressed 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:15580283 NCBI chr  X:71,016,592...71,032,652
Ensembl chr  X:71,016,592...71,032,652 		JBrowse link
G Fbp1 fructose bisphosphatase 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:22039417 NCBI chr13:63,012,567...63,036,112
Ensembl chr13:63,012,567...63,036,096 		JBrowse link
G Fbxl18 F-box and leucine-rich repeat protein 18 ISO CTD Direct Evidence: marker/mechanism CTD PMID:28284560 NCBI chr 5:142,852,701...142,882,696
Ensembl chr 5:142,852,701...142,881,176 		JBrowse link
G Fbxo11 F-box protein 11 exacerbates
ameliorates 		ISO mRNA:increased expression:liver (human) RGD PMID:32657545 PMID:29518611 RGD:152025263, RGD:152025259 NCBI chr17:88,298,287...88,373,473
Ensembl chr17:88,298,287...88,372,719 		JBrowse link
G Fcna ficolin A ISO CTD Direct Evidence: marker/mechanism CTD PMID:28284560 NCBI chr 2:25,514,677...25,525,448
Ensembl chr 2:25,514,678...25,518,042 		JBrowse link
G Fdft1 farnesyl diphosphate farnesyl transferase 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:21147110 NCBI chr14:63,382,599...63,419,136
Ensembl chr14:63,382,599...63,417,027 		JBrowse link
G Fes feline sarcoma oncogene exacerbates ISO DNA:hypermethylation:promoter (human) RGD PMID:31038805 RGD:153323297 NCBI chr 7:80,027,506...80,037,702
Ensembl chr 7:80,027,504...80,037,694 		JBrowse link
G Fgf15 fibroblast growth factor 15 ISO CTD Direct Evidence: marker/mechanism CTD PMID:25822088 NCBI chr 7:144,450,269...144,454,690
Ensembl chr 7:144,450,268...144,454,690 		JBrowse link
G Fgf3 fibroblast growth factor 3 ISO CTD Direct Evidence: marker/mechanism CTD PMID:25822088 NCBI chr 7:144,392,349...144,397,085
Ensembl chr 7:144,391,820...144,398,173 		JBrowse link
G Fgf4 fibroblast growth factor 4 ISO CTD Direct Evidence: marker/mechanism CTD PMID:25822088 NCBI chr 7:144,415,123...144,418,982
Ensembl chr 7:144,401,104...144,418,980 		JBrowse link
G Fgfr1 fibroblast growth factor receptor 1 treatment ISO CTD Direct Evidence: marker/mechanism CTD
RGD		 PMID:36029209 PMID:16452204 PMID:20155451 PMID:21573021 RGD:25330358, RGD:25440478, RGD:25440476 NCBI chr 8:26,008,808...26,067,819
Ensembl chr 8:26,003,670...26,065,734 		JBrowse link
G Fgfr2 fibroblast growth factor receptor 2 severity ISO associated with hepatitis B;DNA:SNPs: promoter, intron:rs308379, rs1219648 (human) RGD PMID:30952770 RGD:38501096 NCBI chr 7:129,764,181...129,868,538
Ensembl chr 7:129,764,181...132,725,079 		JBrowse link
G Fgfr4 fibroblast growth factor receptor 4 treatment ISO RGD PMID:32677805 RGD:150520166 NCBI chr13:55,300,631...55,316,572
Ensembl chr13:55,300,453...55,316,572 		JBrowse link
G Fh1 fumarate hydratase 1 ISO ClinVar Annotator: match by term: Hepatocellular carcinoma ClinVar PMID:10896297 PMID:15221078 PMID:16876016 PMID:17182618 PMID:18313410 More... NCBI chr 1:175,428,944...175,453,201
Ensembl chr 1:175,427,940...175,453,201 		JBrowse link
G Fhit fragile histidine triad gene ISO RGD PMID:12112319 RGD:632723 NCBI chr14:11,307,718...12,919,681
Ensembl chr14:11,307,738...12,919,681 		JBrowse link
G Flt3 FMS-like tyrosine kinase 3 ameliorates ISO human cells in mouse model RGD PMID:27511526 RGD:149735514 NCBI chr 5:147,267,551...147,337,299
Ensembl chr 5:147,267,551...147,337,299 		JBrowse link
G Flvcr1 feline leukemia virus subgroup C cellular receptor 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:28284560 NCBI chr 1:190,738,029...190,758,387
Ensembl chr 1:190,738,044...190,758,355 		JBrowse link
G Fos FBJ osteosarcoma oncogene ISO CTD Direct Evidence: marker/mechanism CTD PMID:9029167 PMID:28284560 NCBI chr12:85,520,664...85,524,048
Ensembl chr12:85,520,664...85,524,047 		JBrowse link
G Fosb FBJ osteosarcoma oncogene B ISO CTD Direct Evidence: marker/mechanism CTD PMID:28284560 NCBI chr 7:19,036,621...19,043,970
Ensembl chr 7:19,036,621...19,043,976 		JBrowse link
G Fosl2 fos-like antigen 2 ISO mRNA:increased expression:liver (human) RGD PMID:30086463 PMID:32048611 RGD:153344517, RGD:153344521 NCBI chr 5:32,292,599...32,315,184
Ensembl chr 5:32,293,145...32,315,186 		JBrowse link
G Foxa1 forkhead box A1 susceptibility
sexual_dimorphism
disease_progression 		ISO DNA:VNTR, SNPs, haplotypes:multiple:
protein:decreased expression:liver 		RGD PMID:29208003 PMID:31400761 PMID:25965836 RGD:151665820, RGD:151665752, RGD:11054501 NCBI chr12:57,585,750...57,594,815
Ensembl chr12:57,587,414...57,593,702 		JBrowse link
G Foxm1 forkhead box M1 IAGP
ISO 		OMIM:114550
CTD Direct Evidence: marker/mechanism 		MouseDO
CTD		 PMID:15082532 PMID:17173139 PMID:28284560 NCBI chr 6:128,339,957...128,352,849
Ensembl chr 6:128,339,930...128,353,109 		JBrowse link
G Foxo1 forkhead box O1 ISO mRNA:decreased expression:liver RGD PMID:28972178 RGD:14401599 NCBI chr 3:52,175,758...52,257,530
Ensembl chr 3:52,175,757...52,260,642 		JBrowse link
G Foxp1 forkhead box P1 treatment ISO RGD PMID:25156538 RGD:9587823 NCBI chr 6:98,902,303...99,510,587
Ensembl chr 6:98,902,299...99,499,682 		JBrowse link
G Foxp3 forkhead box P3 ISO protein:increased expression:liver RGD PMID:21086571 RGD:38548919 NCBI chr  X:7,445,915...7,461,482
Ensembl chr  X:7,439,883...7,461,484 		JBrowse link
G Fst follistatin ISO CTD Direct Evidence: marker/mechanism CTD PMID:12203361 PMID:19363144 NCBI chr13:114,588,798...114,595,522
Ensembl chr13:114,588,826...114,595,487 		JBrowse link
G Fth1 ferritin heavy polypeptide 1 ISO mRNA:increased expression:liver (rat) RGD PMID:9054589 RGD:632698 NCBI chr19:9,957,964...9,962,475
Ensembl chr19:9,957,962...9,962,462 		JBrowse link
G Fubp1 far upstream element (FUSE) binding protein 1 exacerbates
ameliorates 		ISO mRNA:increased expression:liver (human)
associated with Chronic Hepatitis C;mRNA:increased expression:liver (human)
human cell line in a mouse model 		RGD PMID:31587040 PMID:25995247 PMID:19637194 RGD:151361188, RGD:151361196, RGD:151361194 NCBI chr 3:151,916,059...151,942,467
Ensembl chr 3:151,916,059...151,942,463 		JBrowse link
G G6pc1 glucose-6-phosphatase catalytic subunit 1 treatment ISO associated with Glycogen Storage Disease IA, human gene in a mouse model RGD PMID:28096054 RGD:14695537 NCBI chr11:101,258,542...101,268,729
Ensembl chr11:101,258,387...101,268,729 		JBrowse link
G G6pdx glucose-6-phosphate dehydrogenase X-linked disease_progression ISO mRNA:increased expression:liver (human) RGD PMID:25473368 PMID:35693827 RGD:10449118, RGD:153344586 NCBI chr  X:73,453,089...73,472,486
Ensembl chr  X:73,453,089...73,472,800 		JBrowse link
G Gabrd gamma-aminobutyric acid (GABA) A receptor, subunit delta ISO CTD Direct Evidence: marker/mechanism CTD PMID:28284560 NCBI chr 4:155,469,437...155,482,528
Ensembl chr 4:155,469,437...155,482,569 		JBrowse link
G Gapdh glyceraldehyde-3-phosphate dehydrogenase ISO CTD Direct Evidence: marker/mechanism CTD PMID:16767786 PMID:21472284 NCBI chr 6:125,138,812...125,143,450
Ensembl chr 6:125,138,678...125,143,430 		JBrowse link
G Gc vitamin D binding protein susceptibility ISO protein:increased expression:liver
associated with Hepatitis B, Chronic;DNA:SNP: :rs7041(human) 		RGD PMID:21683810 PMID:25541958 RGD:5509919, RGD:14402025 NCBI chr 5:89,565,370...89,605,757
Ensembl chr 5:89,565,381...89,605,757 		JBrowse link
G Gdf15 growth differentiation factor 15 ISO CTD Direct Evidence: marker/mechanism CTD PMID:20512989 NCBI chr 8:71,082,043...71,085,106
Ensembl chr 8:71,082,043...71,085,106 		JBrowse link
G Gdf2 growth differentiation factor 2 ISO CTD Direct Evidence: marker/mechanism CTD PMID:23936038 PMID:28284560 NCBI chr14:33,662,996...33,669,155
Ensembl chr14:33,662,996...33,669,155 		JBrowse link
G Ggt1 gamma-glutamyltransferase 1 disease_progression ISO RNA,protein:increased expression, activity:liver:
HBV associated 		RGD PMID:11940314 PMID:10572675 PMID:27793641 RGD:14701040, RGD:14701048, RGD:14701041 NCBI chr10:75,396,910...75,422,027
Ensembl chr10:75,397,438...75,422,034 		JBrowse link
G Ghr growth hormone receptor ISO CTD Direct Evidence: marker/mechanism CTD PMID:28284560 NCBI chr15:3,347,237...3,612,834
Ensembl chr15:3,347,242...3,612,974 		JBrowse link
G Gins1 GINS complex subunit 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:28284560 NCBI chr 2:150,751,482...150,773,200
Ensembl chr 2:150,747,320...150,773,200 		JBrowse link
G Gjb1 gap junction protein, beta 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:17978847 NCBI chr  X:100,419,982...100,429,235
Ensembl chr  X:100,419,984...100,429,235 		JBrowse link
G Gjb2 gap junction protein, beta 2 ISO DNA, mRNA:promoter hypermethylation, decreased expression:liver RGD PMID:17295234 RGD:2289638 NCBI chr14:57,336,059...57,342,159
Ensembl chr14:57,336,057...57,342,159 		JBrowse link
G Gli1 GLI-Kruppel family member GLI1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:26189965 NCBI chr10:127,165,751...127,177,448
Ensembl chr10:127,165,751...127,177,843 		JBrowse link
G Glul glutamate-ammonia ligase ISO CTD Direct Evidence: marker/mechanism CTD PMID:19363144 NCBI chr 1:153,775,692...153,785,469
Ensembl chr 1:153,775,690...153,785,469 		JBrowse link
G Gm266 predicted gene 266 ISO CTD Direct Evidence: marker/mechanism CTD PMID:28284560 NCBI chr12:111,451,043...111,452,257
Ensembl chr12:111,451,043...111,452,257 		JBrowse link
G Gmnn geminin ISO CTD Direct Evidence: marker/mechanism CTD PMID:28284560 NCBI chr13:24,935,828...24,954,222
Ensembl chr13:24,935,828...24,945,906 		JBrowse link
G Gmps guanine monophosphate synthetase ISO protein:increased activity:hepatoma (rat) RGD PMID:6861338 RGD:5135537 NCBI chr 3:63,871,054...63,928,975
Ensembl chr 3:63,883,527...63,930,000 		JBrowse link
G Gnao1 guanine nucleotide binding protein, alpha O ISO CTD Direct Evidence: marker/mechanism CTD PMID:28284560 NCBI chr 8:94,537,213...94,696,016
Ensembl chr 8:94,536,594...94,696,016 		JBrowse link
G Gnaz guanine nucleotide binding protein, alpha z subunit ISO CTD Direct Evidence: marker/mechanism CTD PMID:28284560 NCBI chr10:74,803,009...74,852,739
Ensembl chr10:74,803,009...74,852,739 		JBrowse link
G Gnmt glycine N-methyltransferase IAGP
ISO 		OMIM:114550
CTD Direct Evidence: marker/mechanism 		MouseDO
CTD		 PMID:19146867 PMID:31086990 NCBI chr17:47,036,590...47,040,091
Ensembl chr17:47,036,590...47,040,094 		JBrowse link
G Golm1 golgi membrane protein 1 severity ISO protein:increased expression:serum
mRNA, protein:increased expression:liver 		RGD PMID:21140449 PMID:21443671 RGD:401827118, RGD:401827119 NCBI chr13:59,782,810...59,823,598
Ensembl chr13:59,782,440...59,823,625 		JBrowse link
G Gpc1 glypican 1 disease_progression ISO mRNA:increased expression:liver (human) RGD PMID:35693827 RGD:153344586 NCBI chr 1:92,759,367...92,787,933
Ensembl chr 1:92,759,367...92,788,501 		JBrowse link
G Gpc3 glypican 3 exacerbates
disease_progression
severity
treatment 		ISO CTD Direct Evidence: marker/mechanism
protein:increased expression:liver (human)
protein:increased expression:blood serum (human)
mRNA,protein:increased expression:peripheral blood mononuclear cell,blood serum, liver (human)
mRNA:increased expression:Peripheral Blood (human)
protein:increased expression:serum 		CTD
RGD		 PMID:16698587 PMID:27286460 PMID:28284560 PMID:22883669 PMID:28801286 More... RGD:243065134, RGD:243065139, RGD:243065135, RGD:243065131, RGD:243065125, RGD:14695020, RGD:14695020, RGD:14695019 NCBI chr  X:51,361,303...51,702,851
Ensembl chr  X:51,361,303...51,702,827 		JBrowse link
G Gpm6a glycoprotein m6a ISO CTD Direct Evidence: marker/mechanism CTD PMID:28284560 NCBI chr 8:55,232,469...55,513,913
Ensembl chr 8:55,407,878...55,513,906 		JBrowse link
G Gpr158 G protein-coupled receptor 158 ISO CTD Direct Evidence: marker/mechanism CTD PMID:28284560 NCBI chr 2:21,372,378...21,835,355
Ensembl chr 2:21,372,353...21,835,358 		JBrowse link
G Gpr182 G protein-coupled receptor 182 ISO CTD Direct Evidence: marker/mechanism CTD PMID:28284560 NCBI chr10:127,585,471...127,587,667
Ensembl chr10:127,583,145...127,587,601 		JBrowse link
G Gpx1 glutathione peroxidase 1 severity
no_association
susceptibility 		ISO associated with hepatitis C;DNA:missense mutation:CDS:p.P198L (rs1050450) (human)
DNA:missense mutation:CDS:p.P198L (human)
associated with alcoholic liver cirrhosis;DNA:missense mutation:CDS:p.P198L (human) 		RGD PMID:26990426 PMID:25894370 PMID:19929244 PMID:16510607 RGD:11533013, RGD:152998906, RGD:152995483, RGD:151708729 NCBI chr 9:108,216,279...108,217,541
Ensembl chr 9:108,216,102...108,217,542 		JBrowse link
G Gpx3 glutathione peroxidase 3 severity
disease_progression 		ISO mRNA,protein:decreased expression:liver, blood plasma (human)
DNA:hypermethylation 		RGD PMID:25333265 PMID:27570561 PMID:25445749 RGD:151665355, RGD:401827855, RGD:151665509 NCBI chr11:54,793,680...54,801,213
Ensembl chr11:54,793,279...54,801,203 		JBrowse link
G Grb7 growth factor receptor bound protein 7 exacerbates ISO protein:increased expression:liver (human) RGD PMID:17634422 RGD:151347655 NCBI chr11:98,337,660...98,346,199
Ensembl chr11:98,337,220...98,346,199 		JBrowse link
G Gstm1 glutathione S-transferase, mu 1 susceptibility
no_association 		ISO DNA:deletion:cds (human)
CTD Direct Evidence: marker/mechanism 		CTD
RGD		 PMID:7892276 PMID:11859714 PMID:20672314 PMID:20683151 RGD:7488953, RGD:14700979, RGD:14700951 NCBI chr 3:107,919,566...107,925,289
Ensembl chr 3:107,919,571...107,925,289 		JBrowse link
G Gstp1 glutathione S-transferase, pi 1 ISO CTD Direct Evidence: marker/mechanism
DNA:increased methylation:promoter 		CTD
RGD		 PMID:9029167 PMID:22536438 RGD:14401712 NCBI chr19:4,085,411...4,087,912
Ensembl chr19:4,085,407...4,087,985 		JBrowse link
G Gstt1 glutathione S-transferase, theta 1 susceptibility
no_association 		ISO DNA:deletion RGD PMID:23053942 PMID:20672314 PMID:20683151 RGD:14401714, RGD:14700979, RGD:14700951 NCBI chr10:75,619,647...75,634,418
Ensembl chr10:75,619,647...75,634,418 		JBrowse link
G Gtse1 G two S phase expressed protein 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:28284560 NCBI chr15:85,743,928...85,760,774
Ensembl chr15:85,743,946...85,760,774 		JBrowse link
G Gys2 glycogen synthase 2 ISO CTD Direct Evidence: marker/mechanism CTD PMID:28284560 NCBI chr 6:142,368,339...142,418,856
Ensembl chr 6:142,368,339...142,418,835 		JBrowse link
G H19 H19, imprinted maternally expressed transcript ISO mRNA:increased expression:liver RGD PMID:17393425 RGD:2306187 NCBI chr 7:142,129,267...142,131,883
Ensembl chr 7:142,129,262...142,133,957 		JBrowse link
G H2-Aa histocompatibility 2, class II antigen A, alpha susceptibility ISO associated with Hepatitis B, Chronic;DNA:SNP: :rs9272105(human)
associated with Hepatitis B, Chronic;DNA:SNPs, haplotype: : rs9275572, rs2596542(human) 		RGD PMID:30160782 PMID:24204805 RGD:14398839, RGD:14401561 NCBI chr17:34,501,718...34,506,797
Ensembl chr17:34,501,718...34,506,797 		JBrowse link
G H2-Ab1 histocompatibility 2, class II antigen A, beta 1 treatment ISO associated with hepatitis B
associated with hepatitis C;DNA:SNPs,haplotypes 		RGD PMID:27288300 PMID:28921602 RGD:14928325, RGD:14974233 NCBI chr17:34,482,201...34,488,392
Ensembl chr17:34,476,663...34,488,393 		JBrowse link
G H2-Pa histocompatibility 2, P region alpha locus ISO DNA:hypomethylation: CpG islands: RGD PMID:20165882 RGD:14694974 NCBI chr17:34,303,587...34,304,826
Ensembl chr17:34,303,575...34,304,797 		JBrowse link
G Hamp hepcidin antimicrobial peptide ISO
IDA
IEP 		CTD Direct Evidence: marker/mechanism
DNA:hypermethylation,hypomethylation:promoter
mRNA:decreased expression:liver (human) 		CTD
RGD		 PMID:28284560 PMID:29235098 PMID:29235098 RGD:15042879, RGD:15042879 NCBI chr 7:30,641,793...30,643,454
Ensembl chr 7:30,641,793...30,643,457 		JBrowse link
G Hao2 hydroxyacid oxidase 2 ISO CTD Direct Evidence: marker/mechanism CTD PMID:28284560 NCBI chr 3:98,781,835...98,802,692
Ensembl chr 3:98,781,837...98,800,555 		JBrowse link
G Havcr1 hepatitis A virus cellular receptor 1 disease_progression ISO mRNA:increased expression:liver (human) RGD PMID:35693827 RGD:153344586 NCBI chr11:46,630,644...46,670,405
Ensembl chr11:46,625,907...46,670,405 		JBrowse link
G Havcr2 hepatitis A virus cellular receptor 2 disease_progression ISO associated with hepatitis B;DNA:SNP: : ���1516 G>T (human) RGD PMID:27034168 RGD:40818257 NCBI chr11:46,345,758...46,372,082
Ensembl chr11:46,345,762...46,372,082 		JBrowse link
G Hdac2 histone deacetylase 2 disease_progression ISO mRNA:increased expression:liver: RGD PMID:24448241 RGD:9590206 NCBI chr10:36,850,293...36,877,885
Ensembl chr10:36,850,540...36,877,885 		JBrowse link
G Hdac4 histone deacetylase 4 ISO mRNA:increased expression:liver: RGD PMID:21837748 RGD:9681451 NCBI chr 1:91,856,501...92,123,424
Ensembl chr 1:91,856,501...92,123,421 		JBrowse link
G Hfe homeostatic iron regulator disease_progression ISO associated with Liver Cirrhosis;DNA:missense mutation:cds:p.C282Y (human) RGD PMID:20019189 PMID:29642405 RGD:2317357, RGD:14746967 NCBI chr13:23,886,017...23,894,837
Ensembl chr13:23,886,017...23,894,837 		JBrowse link
G Hgf hepatocyte growth factor ISO CTD Direct Evidence: marker/mechanism CTD PMID:9932610 PMID:11896611 NCBI chr 5:16,758,493...16,827,448
Ensembl chr 5:16,758,493...16,825,150 		JBrowse link
G Hgfac hepatocyte growth factor activator ISO CTD Direct Evidence: marker/mechanism CTD PMID:19363144 NCBI chr 5:35,198,853...35,205,805
Ensembl chr 5:35,198,853...35,205,805 		JBrowse link
G Hhip Hedgehog-interacting protein ISO CTD Direct Evidence: marker/mechanism CTD PMID:18559595 NCBI chr 8:80,692,480...80,784,637
Ensembl chr 8:80,692,480...80,784,635 		JBrowse link
G Hif1a hypoxia inducible factor 1, alpha subunit treatment
disease_progression 		ISO protein:increased expression:liver (human) RGD PMID:19335982 PMID:31321740 PMID:26078356 RGD:9068886, RGD:155882550, RGD:11526468 NCBI chr12:73,948,186...73,994,304
Ensembl chr12:73,948,149...73,994,304 		JBrowse link
G Hilpda hypoxia inducible lipid droplet associated disease_progression ISO mRNA, protein:increased expression:liver (human)
mRNA:increased expression:liver (human)
human cells in mouse model 		RGD PMID:31142329 PMID:35693827 PMID:30205391 PMID:31142329 RGD:153344574, RGD:153344586, RGD:153344577, RGD:153344574 NCBI chr 6:29,272,487...29,275,448
Ensembl chr 6:29,272,487...29,275,445 		JBrowse link
G Hjurp Holliday junction recognition protein ISO CTD Direct Evidence: marker/mechanism CTD PMID:28284560 NCBI chr 1:88,186,578...88,205,366
Ensembl chr 1:88,190,193...88,205,355 		JBrowse link
G Hmgb2 high mobility group box 2 ISO CTD Direct Evidence: marker/mechanism CTD PMID:20851854 NCBI chr 8:57,964,877...57,969,033
Ensembl chr 8:57,964,941...57,969,033 		JBrowse link
G Hmgcr 3-hydroxy-3-methylglutaryl-Coenzyme A reductase ISO CTD Direct Evidence: marker/mechanism CTD PMID:9207284 PMID:21147110 NCBI chr13:96,785,470...96,807,444
Ensembl chr13:96,785,475...96,807,444 		JBrowse link
G Hmgcs2 3-hydroxy-3-methylglutaryl-Coenzyme A synthase 2 disease_progression ISO RGD PMID:28867541 RGD:14975299 NCBI chr 3:98,187,747...98,218,054
Ensembl chr 3:98,187,751...98,218,054 		JBrowse link
G Hmmr hyaluronan mediated motility receptor (RHAMM) ISO CTD Direct Evidence: marker/mechanism CTD PMID:28284560 NCBI chr11:40,592,215...40,624,290
Ensembl chr11:40,592,222...40,624,249 		JBrowse link
G Hnf1a HNF1 homeobox A treatment IMP human cell line in mouse model RGD PMID:29466992 RGD:14700664 NCBI chr 5:115,087,039...115,109,121
Ensembl chr 5:115,087,039...115,109,153 		JBrowse link
G Hnf4a hepatic nuclear factor 4, alpha ISO protein:decreased expression:liver: RGD PMID:20876809 PMID:20876809 RGD:12904747, RGD:12904747 NCBI chr 2:163,348,731...163,414,827
Ensembl chr 2:163,348,728...163,414,830 		JBrowse link
G Hnrnpa1 heterogeneous nuclear ribonucleoprotein A1 ISO protein:increased expression:liver (human) RGD PMID:23633480 RGD:9685423 NCBI chr15:103,148,840...103,155,119
Ensembl chr15:103,148,859...103,155,119 		JBrowse link
G Hnrnpa2b1 heterogeneous nuclear ribonucleoprotein A2/B1 ISO protein:increased expression:liver (human)
mRNA:increased expression:liver (rat) 		RGD PMID:20604928 PMID:23633480 RGD:9685422, RGD:9685423 NCBI chr 6:51,437,414...51,448,054
Ensembl chr 6:51,437,912...51,446,874 		JBrowse link
G Hnrnpab heterogeneous nuclear ribonucleoprotein A/B severity ISO mRNA:increased expression:liver (human) RGD PMID:24638979 RGD:10059322 NCBI chr11:51,490,927...51,497,708
Ensembl chr11:51,490,927...51,497,674 		JBrowse link
G Hnrnpd heterogeneous nuclear ribonucleoprotein D ISO protein:increased expression:liver (human)
protein:increased expression:liver (rat) 		RGD PMID:20102719 PMID:22318685 RGD:10042969, RGD:10042977 NCBI chr 5:100,103,794...100,126,926
Ensembl chr 5:100,103,794...100,126,797 		JBrowse link
G Hnrnph1 heterogeneous nuclear ribonucleoprotein H1 ISO protein:increased expression:liver (human) RGD PMID:23633480 RGD:9685423 NCBI chr11:50,266,084...50,277,355
Ensembl chr11:50,267,817...50,277,355 		JBrowse link
G Hnrnpl heterogeneous nuclear ribonucleoprotein L ISO associated with Hepatitis B RGD PMID:24125732 RGD:9999429 NCBI chr 7:28,507,971...28,521,693
Ensembl chr 7:28,507,966...28,521,691 		JBrowse link
G Hotair HOX transcript antisense RNA (non-protein coding) ISO CTD Direct Evidence: marker/mechanism CTD PMID:21327457 NCBI chr15:102,852,497...102,856,381
Ensembl chr15:102,852,494...102,862,817 		JBrowse link
G Hoxa10 homeobox A10 ISO CTD Direct Evidence: marker/mechanism CTD PMID:28284560 NCBI chr 6:52,208,177...52,217,658
Ensembl chr 6:52,208,177...52,217,834 		JBrowse link
G Hoxa13 homeobox A13 ISO CTD Direct Evidence: marker/mechanism CTD PMID:28284560 NCBI chr 6:52,235,833...52,237,865
Ensembl chr 6:52,234,674...52,237,788 		JBrowse link
G Hoxd9 homeobox D9 ISO CTD Direct Evidence: marker/mechanism CTD PMID:28284560 NCBI chr 2:74,528,107...74,530,552
Ensembl chr 2:74,528,071...74,530,552 		JBrowse link
G Hp haptoglobin ISO protein:increased expression:saliva
protein:decreased expression:liver (human) 		RGD PMID:31041878 PMID:24259486 RGD:27095881, RGD:152995276 NCBI chr 8:110,301,760...110,305,804
Ensembl chr 8:110,301,760...110,305,804 		JBrowse link
G Hprt1 hypoxanthine phosphoribosyltransferase 1 ISO protein:increased activity:hepatoma (rat) RGD PMID:6327016 RGD:5135035 NCBI chr  X:52,076,955...52,110,537
Ensembl chr  X:52,077,014...52,110,536 		JBrowse link
G Hras Harvey rat sarcoma virus oncogene treatment ISO
IEP 		CTD Direct Evidence: marker/mechanism
ClinVar Annotator: match by term: Hepatocellular cancer | ClinVar Annotator: match by term: Hepatocellular carcinoma
mRNA:increased expression:liver (mouse)
human plasmid in a mouse model
human cells in a mouse model
protein:increased expression:liver (human) 		CTD
ClinVar
RGD		 PMID:8200073 PMID:9311599 PMID:11150980 PMID:12835555 PMID:16155195 More... RGD:14694810, RGD:14694809, RGD:14688055, RGD:14688054 NCBI chr 7:140,770,839...140,773,938
Ensembl chr 7:140,769,018...140,773,918 		JBrowse link
G Hspa5 heat shock protein 5 ISO CTD Direct Evidence: marker/mechanism CTD PMID:21472284 PMID:29698666 NCBI chr 2:34,662,102...34,666,541
Ensembl chr 2:34,661,982...34,667,559 		JBrowse link
G Hspa9 heat shock protein 9 ISO CTD Direct Evidence: marker/mechanism CTD PMID:21472284 NCBI chr18:35,070,467...35,087,404
Ensembl chr18:35,070,467...35,087,410 		JBrowse link
G Hspb1 heat shock protein 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:21472284 NCBI chr 5:135,916,773...135,918,417
Ensembl chr 5:135,916,773...135,918,417 		JBrowse link
G Htatip2 HIV-1 Tat interactive protein 2 ISO CTD Direct Evidence: therapeutic CTD PMID:16799960 NCBI chr 7:49,408,761...49,423,748
Ensembl chr 7:49,408,863...49,423,723 		JBrowse link
G Htra1 HtrA serine peptidase 1 exacerbates
disease_progression 		ISO protein:decreased expression:liver (human)
mRNA:decreased expression:liver (human) 		RGD PMID:20943460 PMID:26403966 RGD:152985524, RGD:152985529 NCBI chr 7:130,537,933...130,587,388
Ensembl chr 7:130,537,841...130,587,390 		JBrowse link
G Icam1 intercellular adhesion molecule 1 severity ISO protein:increased expression:serum RGD PMID:26109813 RGD:11056752 NCBI chr 9:20,927,236...20,940,110
Ensembl chr 9:20,927,281...20,940,113 		JBrowse link
G Idh1 isocitrate dehydrogenase 1 (NADP+), soluble ISO CTD Direct Evidence: marker/mechanism CTD PMID:21472284 NCBI chr 1:65,197,775...65,225,638
Ensembl chr 1:65,197,775...65,225,659 		JBrowse link
G Idh2 isocitrate dehydrogenase 2 (NADP+), mitochondrial disease_progression ISO RGD PMID:24716838 RGD:14985249 NCBI chr 7:79,744,594...79,768,356
Ensembl chr 7:79,744,594...79,765,140 		JBrowse link
G Ier2 immediate early response 2 ISO mRNA, protein:decreased expression:liver (human) RGD PMID:32009420 RGD:153323326 NCBI chr 8:85,387,960...85,389,481
Ensembl chr 8:85,387,960...85,389,483 		JBrowse link
G Ifna1 interferon alpha 1 susceptibility ISO CTD Direct Evidence: therapeutic
associated with hepatitis B; DNA:SNP:: ( rs1831583) (human) 		CTD
RGD		 PMID:17088986 PMID:17971768 PMID:18665156 PMID:29080269 RGD:21406429 NCBI chr 4:88,768,324...88,768,893
Ensembl chr 4:88,768,324...88,768,893 		JBrowse link
G Ifna2 interferon alpha 2 susceptibility ISO associated with hepatitis B; DNA:SNP:enhancer: (rs649053) (human) RGD PMID:29080269 RGD:21406429 NCBI chr 4:88,601,444...88,602,016
Ensembl chr 4:88,601,118...88,602,149 		JBrowse link
G Ifng interferon gamma IEP mRNA:increased expression:liver (mouse) RGD PMID:26569409 RGD:11344640 NCBI chr10:118,276,951...118,281,799
Ensembl chr10:118,276,951...118,281,797 		JBrowse link
G Igbp1 immunoglobulin (CD79A) binding protein 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:21339737 NCBI chr  X:99,537,897...99,559,731
Ensembl chr  X:99,537,897...99,559,731 		JBrowse link
G Igf1 insulin-like growth factor 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:28284560 NCBI chr10:87,694,127...87,772,909
Ensembl chr10:87,694,127...87,772,904 		JBrowse link
G Igf1r insulin-like growth factor I receptor susceptibility ISO CTD Direct Evidence: marker/mechanism
DNA:SNPs, haplotype: : 		CTD
RGD		 PMID:17441810 PMID:23958494 PMID:24758241 RGD:14985227 NCBI chr 7:67,601,486...67,883,416
Ensembl chr 7:67,602,575...67,883,416 		JBrowse link
G Igf2 insulin-like growth factor 2 susceptibility ISO associated with hepatitis B;DNA:SNPs:intron, 3'utr:+2482A>C, +820A>G (human)
CTD Direct Evidence: marker/mechanism 		CTD
RGD		 PMID:12532445 PMID:16092956 PMID:17554210 PMID:16750516 RGD:2311523, RGD:14401723 NCBI chr 7:142,204,505...142,220,566
Ensembl chr 7:142,204,503...142,220,553 		JBrowse link
G Igf2bp1 insulin-like growth factor 2 mRNA binding protein 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:28284560 NCBI chr11:95,847,989...95,896,770
Ensembl chr11:95,847,989...95,896,766 		JBrowse link
G Igf2bp3 insulin-like growth factor 2 mRNA binding protein 3 ISO CTD Direct Evidence: marker/mechanism CTD PMID:28284560 NCBI chr 6:49,062,152...49,200,225
Ensembl chr 6:49,062,157...49,191,891 		JBrowse link
G Igf2r insulin-like growth factor 2 receptor treatment
no_association
disease_progression 		ISO DNA:mutation:G1449V (human)
ClinVar Annotator: match by term: Hepatocellular carcinoma
associated with hepatitis B virus; mRNA:decreased expression:liver:
DNA:loss of heterozygosity,mutations:liver:
DNA:loss of heterozygosity:liver
protein:increased expression:serum:
CTD Direct Evidence: marker/mechanism 		ClinVar
CTD
OMIM
RGD		 PMID:9722161 PMID:15057872 PMID:25741868 PMID:7493029 PMID:12736721 More... RGD:1624323, RGD:14985225, RGD:14985222, RGD:14985221, RGD:14985220, RGD:14985219, RGD:14985218 NCBI chr17:12,901,293...12,988,593
Ensembl chr17:12,901,293...12,988,551 		JBrowse link
G Igfals insulin-like growth factor binding protein, acid labile subunit ISO CTD Direct Evidence: marker/mechanism CTD PMID:28284560 NCBI chr17:25,096,818...25,100,985
Ensembl chr17:25,084,971...25,100,984 		JBrowse link
G Ikbkg inhibitor of kappaB kinase gamma treatment IMP
ISO 		protein:decreased expression:liver (human) RGD PMID:29551768 PMID:22922425 PMID:24971483 PMID:17292824 PMID:25173965 More... RGD:153297807, RGD:153305947, RGD:11079569, RGD:153305945, RGD:153305943, RGD:153297813 NCBI chr  X:73,436,883...73,498,013
Ensembl chr  X:73,436,896...73,497,460 		JBrowse link
G Ikzf1 IKAROS family zinc finger 1 ameliorates ISO protein:increased expression:liver (human) RGD PMID:25301737 RGD:150540326 NCBI chr11:11,634,970...11,722,930
Ensembl chr11:11,634,980...11,722,926 		JBrowse link
G Il10 interleukin 10 treatment ISO RGD PMID:23822114 PMID:26890368 RGD:7365006, RGD:14975171 NCBI chr 1:130,947,459...130,952,707
Ensembl chr 1:130,947,582...130,952,711 		JBrowse link
G Il12a interleukin 12a susceptibility ISO associated with hepatitis C;DNA:SNP:3'UTR: rs568408( G>A)(human)
associated with hepatitis B; DNA:SNP, haplotype:3′UTR::rs568408(human) 		RGD PMID:27819525 PMID:26631030 PMID:20521253 RGD:25440490, RGD:25440501, RGD:25440491 NCBI chr 3:68,597,977...68,605,881
Ensembl chr 3:68,597,977...68,605,880 		JBrowse link
G Il15ra interleukin 15 receptor, alpha chain disease_progression ISO mRNA:increased expression:liver (human) RGD PMID:35693827 RGD:153344586 NCBI chr 2:11,709,992...11,739,129
Ensembl chr 2:11,710,101...11,739,128 		JBrowse link
G Il18 interleukin 18 severity
disease_progression
susceptibility 		ISO associated with hepatitis C;DNA:SNPs, haplotype:promoter:-607C>A, -137G>C(human)
associated with hepatitis B, chronic;DNA:SNP:promoter:-607C>A(human)
DNA:SNP:promoter:-137G>C(rs187238)(human) 		RGD PMID:29341496 PMID:27470888 PMID:27429592 PMID:26893476 RGD:14695526, RGD:14696663, RGD:14695540, RGD:11538094 NCBI chr 9:50,466,000...50,493,141
Ensembl chr 9:50,466,127...50,493,140 		JBrowse link
G Il18r1 interleukin 18 receptor 1 ISO
IMP 		mRNA:decreased expression:liver RGD PMID:26893476 PMID:26893476 RGD:11538094, RGD:11538094 NCBI chr 1:40,504,712...40,540,014
Ensembl chr 1:40,504,712...40,540,014 		JBrowse link
G Il1b interleukin 1 beta susceptibility ISO DNA:polymorphism:promoter:-31T>C (human) RGD PMID:21653279 RGD:7401222 NCBI chr 2:129,206,490...129,213,059
Ensembl chr 2:129,206,490...129,213,059 		JBrowse link
G Il1rap interleukin 1 receptor accessory protein ISO CTD Direct Evidence: marker/mechanism CTD PMID:28284560 NCBI chr16:26,400,259...26,548,878
Ensembl chr16:26,400,454...26,548,867 		JBrowse link
G Il1rn interleukin 1 receptor antagonist ISO CTD Direct Evidence: marker/mechanism CTD PMID:28284560 NCBI chr 2:24,226,872...24,241,503
Ensembl chr 2:24,226,865...24,241,506 		JBrowse link
G Il2 interleukin 2 treatment ISO RGD PMID:10933975 PMID:9449371 RGD:8693323, RGD:14747035 NCBI chr 3:37,174,862...37,180,103
Ensembl chr 3:37,174,672...37,180,108 		JBrowse link
G Il21 interleukin 21 ISO associated with hepatitis B;DNA:SNPS, haplotype:(rs13143866, rs2221903, rs907715) (human) RGD PMID:25892873 RGD:127285359 NCBI chr 3:37,276,908...37,286,785
Ensembl chr 3:37,276,908...37,286,785 		JBrowse link
G Il6 interleukin 6 treatment
disease_progression 		ISO
IEP 		CTD Direct Evidence: marker/mechanism
mRNA,protein:increased expression:liver, blood serum (mouse)
DNA:SNP: :rs2069852 (human) 		CTD
RGD		 PMID:17615358 PMID:20818158 PMID:26297436 PMID:27022031 PMID:29486150 More... RGD:127285672, RGD:11344640, RGD:14975289 NCBI chr 5:30,218,112...30,224,973
Ensembl chr 5:30,218,112...30,224,979 		JBrowse link
G Il6st interleukin 6 signal transducer ISO RGD PMID:15780071 RGD:1626706 NCBI chr13:112,600,604...112,643,394
Ensembl chr13:112,600,604...112,646,620 		JBrowse link
G Ing3 inhibitor of growth family, member 3 treatment ISO RGD PMID:25156538 RGD:9587823 NCBI chr 6:21,948,002...21,976,037
Ensembl chr 6:21,949,570...21,976,037 		JBrowse link
G Inmt indolethylamine N-methyltransferase ISO CTD Direct Evidence: marker/mechanism CTD PMID:28284560 NCBI chr 6:55,147,612...55,151,975
Ensembl chr 6:55,147,611...55,152,028 		JBrowse link
G Inpp4b inositol polyphosphate-4-phosphatase, type II ISO CTD Direct Evidence: marker/mechanism CTD PMID:29415082 NCBI chr 8:82,068,895...82,865,553
Ensembl chr 8:82,069,185...82,854,543 		JBrowse link
G Ins1 insulin I ISO CTD Direct Evidence: marker/mechanism CTD PMID:28284560 NCBI chr19:52,252,735...52,253,453
Ensembl chr19:52,252,735...52,253,914 		JBrowse link
G Ins2 insulin II ISO associated with Chronic Hepatitis C;mRNA:decreased expression:liver (human) RGD PMID:33132693 RGD:150340613 NCBI chr 7:142,232,393...142,233,463
Ensembl chr 7:142,232,393...142,297,118 		JBrowse link
G Insr insulin receptor ISO mRNA, protein:increased expression:liver (human, rat)
human cells in a mouse model 		RGD PMID:23633480 PMID:29610518 RGD:9685423, RGD:14700930 NCBI chr 8:3,200,922...3,329,649
Ensembl chr 8:3,172,061...3,329,617 		JBrowse link
G Iqgap1 IQ motif containing GTPase activating protein 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:20977743 NCBI chr 7:80,361,331...80,453,288
Ensembl chr 7:80,361,331...80,475,722 		JBrowse link
G Iqgap2 IQ motif containing GTPase activating protein 2 ISO
IAGP 		CTD Direct Evidence: marker/mechanism
OMIM:114550 		CTD
MouseDO		 PMID:20977743 NCBI chr13:95,763,685...96,028,788
Ensembl chr13:95,763,682...96,028,991 		JBrowse link
G Iqgap3 IQ motif containing GTPase activating protein 3 ISO CTD Direct Evidence: marker/mechanism CTD PMID:28284560 NCBI chr 3:87,989,309...88,028,355
Ensembl chr 3:87,989,278...88,028,355 		JBrowse link
G Irf2 interferon regulatory factor 2 ISO CTD Direct Evidence: marker/mechanism CTD PMID:22561517 NCBI chr 8:47,192,751...47,300,493
Ensembl chr 8:47,192,767...47,300,493 		JBrowse link
G Irs1 insulin receptor substrate 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:1311924 PMID:23958494 NCBI chr 1:82,210,826...82,269,160
Ensembl chr 1:82,210,822...82,269,137 		JBrowse link
G Irs2 insulin receptor substrate 2 ISO CTD Direct Evidence: marker/mechanism CTD PMID:16127164 NCBI chr 8:11,034,681...11,058,929
Ensembl chr 8:11,034,681...11,058,458 		JBrowse link
G Isg15 ISG15 ubiquitin-like modifier ISO CTD Direct Evidence: marker/mechanism CTD PMID:28919514 NCBI chr 4:156,283,881...156,285,275
Ensembl chr 4:156,283,912...156,285,253 		JBrowse link
G Itih3 inter-alpha trypsin inhibitor, heavy chain 3 ISO CTD Direct Evidence: marker/mechanism CTD PMID:19363144 NCBI chr14:30,630,529...30,645,748
Ensembl chr14:30,630,529...30,645,717 		JBrowse link
G Itih4 inter alpha-trypsin inhibitor, heavy chain 4 disease_progression ISO associated with hepatitis B;protein:decreased expression:serum RGD PMID:24836184 RGD:40903002 NCBI chr14:30,608,433...30,623,943
Ensembl chr14:30,608,433...30,624,310 		JBrowse link
G Jag1 jagged 1 ISO protein:increased expression:liver RGD PMID:30660174 RGD:14694832 NCBI chr 2:136,923,371...136,958,440
Ensembl chr 2:136,923,376...136,958,564 		JBrowse link
G Jak1 Janus kinase 1 ISO RGD PMID:23788652 RGD:150524353 NCBI chr 4:101,009,171...101,122,493
Ensembl chr 4:101,009,564...101,122,479 		JBrowse link
G Jak2 Janus kinase 2 severity
treatment
ameliorates
exacerbates 		IEP
ISO
IMP 		mRNA:decreased expression:liver (human)
L-JAK2 KO
associated with Diseases of the Aged and non-alcoholic fatty liver disease
protein:increased phosphorylation:liver (mouse)
protein:increased phosphorylation:liver (human) 		RGD PMID:25420511 PMID:29486150 PMID:28100771 PMID:31393852 PMID:22821478 More... RGD:18182928, RGD:127285672, RGD:127285675, RGD:127285655, RGD:127285621, RGD:125097525 NCBI chr19:29,229,006...29,290,495
Ensembl chr19:29,229,228...29,290,480 		JBrowse link
G Jdp2 Jun dimerization protein 2 ISO CTD Direct Evidence: marker/mechanism CTD PMID:20214788 NCBI chr12:85,645,190...85,686,652
Ensembl chr12:85,645,801...85,686,652 		JBrowse link
G Jun jun proto-oncogene ISO CTD Direct Evidence: marker/mechanism CTD PMID:20214788 NCBI chr 4:94,937,273...94,940,459
Ensembl chr 4:94,937,271...94,940,459 		JBrowse link
G Jund jun D proto-oncogene ISO associated with HBV;protein:increased expression:liver (human) RGD PMID:15927205 RGD:153297768 NCBI chr 8:71,150,389...71,153,265
Ensembl chr 8:71,151,599...71,153,265 		JBrowse link
G Kat2b K(lysine) acetyltransferase 2B severity ISO protein:decreased expression:liver (human) RGD PMID:23643089 RGD:9590314 NCBI chr17:53,873,802...53,979,749
Ensembl chr17:53,873,889...53,979,748 		JBrowse link
G Kbtbd11 kelch repeat and BTB (POZ) domain containing 11 ISO CTD Direct Evidence: marker/mechanism CTD PMID:28284560 NCBI chr 8:15,059,408...15,083,333
Ensembl chr 8:15,061,025...15,083,333 		JBrowse link
G Kcnh1 potassium voltage-gated channel, subfamily H (eag-related), member 1 ISO protein:increased expression:liver (human) RGD PMID:17022810 RGD:9693723 NCBI chr 1:191,871,759...192,192,467
Ensembl chr 1:191,873,082...192,192,467 		JBrowse link
G Kcnn2 potassium intermediate/small conductance calcium-activated channel, subfamily N, member 2 ISO CTD Direct Evidence: marker/mechanism CTD PMID:28284560 NCBI chr18:45,401,754...45,818,954
Ensembl chr18:45,401,927...45,818,950 		JBrowse link
G Kdm1a lysine (K)-specific demethylase 1A severity ISO mRNA, protein:increased expression:liver (human) RGD PMID:23236241 RGD:9681002 NCBI chr 4:136,277,844...136,330,127
Ensembl chr 4:136,277,851...136,330,034 		JBrowse link
G Kdm3a lysine (K)-specific demethylase 3A ISO mRNA:increased expression:liver (human) RGD PMID:21607773 RGD:9590222 NCBI chr 6:71,565,954...71,609,963
Ensembl chr 6:71,565,956...71,609,974 		JBrowse link
G Kdm5c lysine demethylase 5C exacerbates ISO protein:increased expression:liver (human) RGD PMID:26503415 RGD:11530160 NCBI chr  X:151,015,698...151,062,098
Ensembl chr  X:151,016,016...151,057,531 		JBrowse link
G Kdm6a lysine (K)-specific demethylase 6A ameliorates ISO human cells in a mouse model RGD PMID:32765772 RGD:150429729 NCBI chr  X:18,027,101...18,147,061
Ensembl chr  X:18,028,814...18,146,175 		JBrowse link
G Kdm8 lysine (K)-specific demethylase 8 ISO CTD Direct Evidence: marker/mechanism CTD PMID:28284560 NCBI chr 7:125,043,788...125,062,823
Ensembl chr 7:125,043,848...125,061,441 		JBrowse link
G Kdr kinase insert domain protein receptor treatment
disease_progression 		ISO DNA:SNPs: :rs1870377, rs2071559, rs2305948 (human)
associated with alcoholic liver cirrhosis;DNA:SNP: :1416A>T (human)
protein:decreased expression:liver
protein:increased expression:liver 		RGD PMID:25182707 PMID:24445728 PMID:23660204 PMID:25333267 PMID:19177438 RGD:126848806, RGD:126848814, RGD:126848813, RGD:126848812, RGD:126848810 NCBI chr 5:76,093,487...76,139,880
Ensembl chr 5:76,093,487...76,139,118 		JBrowse link
G Kif11 kinesin family member 11 ISO CTD Direct Evidence: marker/mechanism CTD PMID:28284560 NCBI chr19:37,364,830...37,410,311
Ensembl chr19:37,364,851...37,410,307 		JBrowse link
G Kif14 kinesin family member 14 ISO CTD Direct Evidence: marker/mechanism CTD PMID:28284560 NCBI chr 1:136,394,044...136,483,676
Ensembl chr 1:136,394,081...136,459,249 		JBrowse link
G Kif15 kinesin family member 15 ISO CTD Direct Evidence: marker/mechanism CTD PMID:28284560 NCBI chr 9:122,780,146...122,847,798
Ensembl chr 9:122,780,111...122,847,798 		JBrowse link
G Kif18a kinesin family member 18A ISO CTD Direct Evidence: marker/mechanism CTD PMID:28284560 NCBI chr 2:109,111,165...109,172,094
Ensembl chr 2:109,111,083...109,172,092 		JBrowse link
G Kif18b kinesin family member 18B ISO CTD Direct Evidence: marker/mechanism CTD PMID:28284560 NCBI chr11:102,796,344...102,815,960
Ensembl chr11:102,796,355...102,815,950 		JBrowse link
G Kif1b kinesin family member 1B severity
susceptibility 		ISO mRNA, protein:decreased expression:liver (human)
DNA:snp:intron:c.2537+518A>G (rs17401966) (human) 		RGD PMID:26217094 PMID:27122668 RGD:11052488, RGD:12738461 NCBI chr 4:149,260,776...149,392,762
Ensembl chr 4:149,260,776...149,392,150 		JBrowse link
G Kif20a kinesin family member 20A ISO CTD Direct Evidence: marker/mechanism CTD PMID:28284560 NCBI chr18:34,757,677...34,766,330
Ensembl chr18:34,757,666...34,766,330 		JBrowse link
G Kif23 kinesin family member 23 ISO CTD Direct Evidence: marker/mechanism CTD PMID:28284560 NCBI chr 9:61,824,559...61,854,078
Ensembl chr 9:61,823,187...61,854,056 		JBrowse link
G Kif2c kinesin family member 2C ISO CTD Direct Evidence: marker/mechanism CTD PMID:28284560 NCBI chr 4:117,016,830...117,039,821
Ensembl chr 4:117,016,836...117,039,836 		JBrowse link
G Kif4 kinesin family member 4 ISO CTD Direct Evidence: marker/mechanism CTD PMID:28284560 NCBI chr  X:99,669,693...99,770,878
Ensembl chr  X:99,669,343...99,770,820 		JBrowse link
G Kifc1 kinesin family member C1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:28284560 NCBI chr17:34,094,640...34,109,607
Ensembl chr17:34,094,633...34,109,635 		JBrowse link
G Klf4 Kruppel-like transcription factor 4 (gut) disease_progression
treatment 		ISO RGD PMID:22677193 PMID:22677193 RGD:14402023, RGD:14402023 NCBI chr 4:55,527,137...55,536,984
Ensembl chr 4:55,527,143...55,532,466 		JBrowse link
G Klrb1 killer cell lectin-like receptor subfamily B member 1 disease_progression ISO mRNA:decreased expression:liver (human) RGD PMID:35693827 RGD:153344586 NCBI chr 6:128,683,056...128,701,293
Ensembl chr 6:128,682,799...128,700,022 		JBrowse link
G Kmt2a lysine (K)-specific methyltransferase 2A ISO CTD Direct Evidence: marker/mechanism CTD PMID:22634756 NCBI chr 9:44,714,652...44,793,492
Ensembl chr 9:44,714,652...44,792,594 		JBrowse link
G Kmt2b lysine (K)-specific methyltransferase 2B ISO DNA:insertions, translocations:intron:IVS3, multiple (human)
CTD Direct Evidence: marker/mechanism 		CTD
RGD		 PMID:22634754 PMID:18320596 RGD:9588597 NCBI chr 7:30,268,280...30,288,371
Ensembl chr 7:30,268,283...30,288,151 		JBrowse link
G Kmt2c lysine (K)-specific methyltransferase 2C ISO CTD Direct Evidence: marker/mechanism CTD PMID:22634756 NCBI chr 5:25,476,793...25,703,853
Ensembl chr 5:25,476,796...25,703,781 		JBrowse link
G Kras Kirsten rat sarcoma viral oncogene homolog induced ISO CTD Direct Evidence: marker/mechanism
mRNA,protein:increased expression:liver
aflatoxin B1 induced:DNA:transversion,transition mutations:cds: 		CTD
RGD		 PMID:11286481 PMID:11563603 PMID:29275358 PMID:8446626 RGD:14398750, RGD:11568697 NCBI chr 6:145,162,425...145,197,631
Ensembl chr 6:145,162,425...145,195,965 		JBrowse link
G Krt18 keratin 18 IAGP OMIM:114550 MouseDO NCBI chr15:101,936,651...101,940,461
Ensembl chr15:101,936,615...101,940,462 		JBrowse link
G Lcat lecithin cholesterol acyltransferase ISO CTD Direct Evidence: marker/mechanism CTD PMID:28284560 NCBI chr 8:106,666,183...106,670,034
Ensembl chr 8:106,666,183...106,670,014 		JBrowse link
G Lect2 leukocyte cell-derived chemotaxin 2 ameliorates IEP
ISO 		protein:increased expression:blood serum (mouse)
human cells in mouse model
protein:increased expression:blood serum (human) 		RGD PMID:24892551 PMID:21394108 PMID:24892551 RGD:153323333, RGD:153323335, RGD:153323333 NCBI chr13:56,676,772...56,696,373
Ensembl chr13:56,690,277...56,696,315 		JBrowse link
G Lep leptin susceptibility
severity 		IAGP
IEP 		DNA:SNP:enhancer:-2548G>A (rs7799039) (human)
protein:increased expression:liver (human) 		RGD PMID:28452232 PMID:18573568 RGD:15039399, RGD:25330348 NCBI chr 6:29,060,220...29,073,875
Ensembl chr 6:29,060,219...29,073,876 		JBrowse link
G Lepr leptin receptor susceptibility ISO associated with Hepatitis B, Chronic;DNA:SNPs:cds:p.Gln223Arg, Lys109Arg (human) RGD PMID:23090836 RGD:21079466 NCBI chr 4:101,574,393...101,676,375
Ensembl chr 4:101,574,601...101,672,549 		JBrowse link
G Letm1 leucine zipper-EF-hand containing transmembrane protein 1 ISO CTD Direct Evidence: therapeutic CTD PMID:23392203 NCBI chr 5:33,897,017...33,940,061
Ensembl chr 5:33,897,017...33,940,161 		JBrowse link
G Lifr LIF receptor alpha ISO CTD Direct Evidence: marker/mechanism CTD PMID:28284560 NCBI chr15:7,120,091...7,226,970
Ensembl chr15:7,120,095...7,226,970 		JBrowse link
G LOC110806267 Tert 5' regulatory region ISO ClinVar Annotator: match by term: Hepatocellular carcinoma ClinVar PMID:28492532 PMID:28677271 NCBI chr13:73,770,663...73,775,510 JBrowse link
G Loxl3 lysyl oxidase-like 3 ISO CTD Direct Evidence: marker/mechanism CTD PMID:35841383 NCBI chr 6:83,011,186...83,029,547
Ensembl chr 6:83,011,154...83,029,543 		JBrowse link
G Lpar1 lysophosphatidic acid receptor 1 ISO RGD PMID:19000703 RGD:2317680 NCBI chr 4:58,435,252...58,554,601
Ensembl chr 4:58,435,255...58,553,898 		JBrowse link
G Lrat lecithin-retinol acyltransferase (phosphatidylcholine-retinol-O-acyltransferase) ISO CTD Direct Evidence: marker/mechanism CTD PMID:28284560 NCBI chr 3:82,799,889...82,811,281
Ensembl chr 3:82,799,886...82,811,280 		JBrowse link
G Lrp1b low density lipoprotein-related protein 1B exacerbates ISO protein:increased expression:liver (human)
DNA:mutations:multiple: (human) 		RGD PMID:33324588 PMID:33391418 RGD:150429776, RGD:150429785 NCBI chr 2:40,485,302...42,543,747
Ensembl chr 2:40,485,258...42,543,636 		JBrowse link
G Lrrc1 leucine rich repeat containing 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:28284560 NCBI chr 9:77,338,103...77,453,749
Ensembl chr 9:77,338,105...77,452,152 		JBrowse link
G Lrrc56 leucine rich repeat containing 56 ISO ClinVar Annotator: match by term: Hepatocellular cancer | ClinVar Annotator: match by term: Hepatocellular carcinoma ClinVar PMID:11150980 PMID:12835555 PMID:16155195 PMID:16170316 PMID:16329078 More... NCBI chr 7:140,774,024...140,789,968
Ensembl chr 7:140,774,070...140,789,968 		JBrowse link
G Lrrc59 leucine rich repeat containing 59 ISO CTD Direct Evidence: marker/mechanism CTD PMID:30705370 NCBI chr11:94,520,603...94,536,049
Ensembl chr11:94,520,593...94,536,042 		JBrowse link
G Lyve1 lymphatic vessel endothelial hyaluronan receptor 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:28284560 NCBI chr 7:110,449,814...110,462,160
Ensembl chr 7:110,449,814...110,462,446 		JBrowse link
G Lztr1 leucine-zipper-like transcriptional regulator, 1 ISO DNA:missense mutation:cds, liver (human) RGD PMID:28622513 RGD:151893487 NCBI chr16:17,326,124...17,344,197
Ensembl chr16:17,326,552...17,344,197 		JBrowse link
G Mad2l1 MAD2 mitotic arrest deficient-like 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:28284560 PMID:39316419 NCBI chr 6:66,512,205...66,518,091
Ensembl chr 6:66,512,374...66,524,204 		JBrowse link
G Magea3 MAGE family member A3 ISO CTD Direct Evidence: marker/mechanism CTD PMID:28284560 NCBI chr  X:153,731,176...153,742,027
Ensembl chr  X:153,731,539...153,732,501 		JBrowse link
G Magea5 MAGE family member A5 ISO CTD Direct Evidence: marker/mechanism CTD PMID:28284560 NCBI chr  X:153,836,057...153,846,147
Ensembl chr  X:153,836,057...153,846,141 		JBrowse link
G Magea6 MAGE family member A6 ISO CTD Direct Evidence: marker/mechanism CTD PMID:28284560 NCBI chr  X:153,706,891...153,719,070
Ensembl chr  X:153,707,008...153,718,983 		JBrowse link
G Magec2 MAGE family member C2 ISO CTD Direct Evidence: marker/mechanism CTD PMID:28284560 NCBI chr  X:61,326,566...61,335,690
Ensembl chr  X:61,327,105...61,335,684 		JBrowse link
G Malat1 metastasis associated lung adenocarcinoma transcript 1 (non-coding RNA) ISO CTD Direct Evidence: marker/mechanism CTD PMID:26735578 NCBI chr19:5,845,718...5,852,700
Ensembl chr19:5,845,717...5,853,602 		JBrowse link
G Map2k2 mitogen-activated protein kinase kinase 2 exacerbates ISO mRNA:increased expression:liver (human)
protein:increased expression:liver, cytosol (rat) 		RGD PMID:33553243 PMID:9397988 RGD:150530475, RGD:150530477 NCBI chr10:80,941,749...80,960,531
Ensembl chr10:80,941,749...80,969,809 		JBrowse link
G Map2k4 mitogen-activated protein kinase kinase 4 ISO protein:decreased expression:liver (human) RGD PMID:32850377 RGD:150429765 NCBI chr11:65,579,070...65,679,185
Ensembl chr11:65,579,069...65,679,123 		JBrowse link
G Map3k1 mitogen-activated protein kinase kinase kinase 1 exacerbates ISO mRNA:decreased expression:liver (human) RGD PMID:31310010 RGD:150573714 NCBI chr13:111,882,962...111,954,803
Ensembl chr13:111,882,962...111,945,527 		JBrowse link
G Map3k8 mitogen-activated protein kinase kinase kinase 8 ameliorates IMP RGD PMID:26560698 RGD:11342977 NCBI chr18:4,331,325...4,352,978
Ensembl chr18:4,331,327...4,353,015 		JBrowse link
G Map4k4 mitogen-activated protein kinase kinase kinase kinase 4 ameliorates
treatment
severity 		ISO human cell line in a mouse model
human recombinant gene and cell line in a mouse model 		RGD PMID:21196414 PMID:31922225 PMID:27010469 RGD:151347673, RGD:151347839, RGD:151347674 NCBI chr 1:39,939,806...40,065,470
Ensembl chr 1:39,940,073...40,065,470 		JBrowse link
G Mapk1 mitogen-activated protein kinase 1 ISO protein:increased expression:liver RGD PMID:27468214 RGD:401976278 NCBI chr16:16,801,246...16,865,317
Ensembl chr16:16,801,246...16,865,317 		JBrowse link
G Mapk14 mitogen-activated protein kinase 14 treatment
exacerbates 		IMP RGD PMID:25216638 PMID:23271722 RGD:151665347, RGD:151665348 NCBI chr17:28,910,316...28,967,379
Ensembl chr17:28,910,303...28,967,380 		JBrowse link
G Mapk8 mitogen-activated protein kinase 8 ameliorates ISO protein:decreased phosphorylation:liver (human) RGD PMID:33875785 RGD:150340688 NCBI chr14:33,099,855...33,169,213
Ensembl chr14:33,099,855...33,169,115 		JBrowse link
G Mapt microtubule-associated protein tau ISO CTD Direct Evidence: marker/mechanism CTD PMID:28284560 NCBI chr11:104,120,235...104,222,916
Ensembl chr11:104,122,216...104,222,916 		JBrowse link
G Marco macrophage receptor with collagenous structure ISO CTD Direct Evidence: marker/mechanism CTD PMID:28284560 NCBI chr 1:120,402,267...120,432,753
Ensembl chr 1:120,402,267...120,432,753 		JBrowse link
G Mat1a methionine adenosyltransferase 1A ISO CTD Direct Evidence: marker/mechanism CTD PMID:12060674 NCBI chr14:40,826,969...40,846,385
Ensembl chr14:40,826,992...40,846,369 		JBrowse link
G Mbl2 mannose-binding lectin (protein C) 2 severity
susceptibility
no_association 		ISO associated with hepatitis C;DNA:SNP: :221C>G(rs709620)(human)
associated with hepatitis B;DNA:SNP:exon:
protein:decreased expression:plasma
DNA:SNPs:promoter:rs7096206(human)
associated with viral hepatitis;DNA:polymorphisms:exon:
associated with hepatitis B-related cirrhosis;DNA:SNP: :rs11003123(G>A)(human) 		RGD PMID:21733090 PMID:26857650 PMID:27557564 PMID:25787238 PMID:18221301 More... RGD:14696813, RGD:14696836, RGD:14696835, RGD:14696833, RGD:14696829, RGD:14696814 NCBI chr19:30,210,306...30,217,087
Ensembl chr19:30,210,342...30,217,087 		JBrowse link
G Mbtps1 membrane-bound transcription factor peptidase, site 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:14563831 NCBI chr 8:120,234,890...120,285,603
Ensembl chr 8:120,234,895...120,285,474 		JBrowse link
G Mbtps2 membrane-bound transcription factor peptidase, site 2 ISO CTD Direct Evidence: marker/mechanism CTD PMID:14563831 NCBI chr  X:156,330,818...156,381,711
Ensembl chr  X:156,318,367...156,381,711 		JBrowse link
G Mcm10 minichromosome maintenance 10 replication initiation factor ISO CTD Direct Evidence: marker/mechanism CTD PMID:28284560 NCBI chr 2:4,995,535...5,017,602
Ensembl chr 2:4,994,525...5,017,602 		JBrowse link
G Mcm2 minichromosome maintenance complex component 2 ISO CTD Direct Evidence: marker/mechanism CTD PMID:28284560 NCBI chr 6:88,860,456...88,875,762
Ensembl chr 6:88,860,456...88,875,762 		JBrowse link
G Mcm7 minichromosome maintenance complex component 7 susceptibility IAGP
IEP 		associated with hepatitis B;DNA:SNP:promoter: (rs999885) (human)
associated with hepatitis B;miRNA:increased expression:liver (human) 		RGD PMID:24416400 PMID:27298561 RGD:15042885, RGD:15042853 NCBI chr 5:138,162,845...138,170,675
Ensembl chr 5:138,162,845...138,170,684 		JBrowse link
G Mcm9 minichromosome maintenance 9 homologous recombination repair factor IAGP OMIM:114550 MouseDO NCBI chr10:53,412,411...53,507,251
Ensembl chr10:53,412,411...53,506,535 		JBrowse link
G Mdm2 transformed mouse 3T3 cell double minute 2 susceptibility ISO DNA:transversion:promoter:g.-309T>G (human) RGD PMID:20019189 RGD:2317357 NCBI chr10:117,524,780...117,546,663
Ensembl chr10:117,524,780...117,546,663 		JBrowse link
G Me1 malic enzyme 1, NADP(+)-dependent, cytosolic ISO CTD Direct Evidence: marker/mechanism CTD PMID:21147110 NCBI chr 9:86,463,416...86,577,967
Ensembl chr 9:86,463,424...86,578,006 		JBrowse link
G Mecp2 methyl CpG binding protein 2 ISO CTD Direct Evidence: marker/mechanism
mRNA, protein:increased expression:liver 		CTD
RGD		 PMID:26189965 PMID:11844796 RGD:2289670 NCBI chr  X:73,070,198...73,129,296
Ensembl chr  X:73,070,198...73,129,296 		JBrowse link
G Med1 mediator complex subunit 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:20007298 NCBI chr11:98,042,980...98,084,121
Ensembl chr11:98,042,980...98,084,119 		JBrowse link
G Melk maternal embryonic leucine zipper kinase ISO CTD Direct Evidence: marker/mechanism CTD PMID:28284560 NCBI chr 4:44,300,876...44,364,301
Ensembl chr 4:44,300,876...44,364,675 		JBrowse link
G Met met proto-oncogene susceptibility
severity 		ISO
IMP 		protein:increased expression:liver (rat)
ClinVar Annotator: match by term: Hepatocellular cancer
protein:increased expression:liver (human)
CTD Direct Evidence: marker/mechanism
mRNA:increased expression:liver, carcinoma (human) 		OMIM
ClinVar
CTD
RGD		 PMID:21774103 PMID:21970370 PMID:22703879 PMID:24728327 PMID:25741868 More... RGD:2317495, RGD:152995524, RGD:152995524, RGD:2317575, RGD:1600123 NCBI chr 6:17,463,351...17,573,979
Ensembl chr 6:17,463,799...17,573,979 		JBrowse link
G Mfsd2a MFSD2 lysolipid transporter A, lysophospholipid ISO CTD Direct Evidence: marker/mechanism CTD PMID:28284560 NCBI chr 4:122,840,643...122,855,844
Ensembl chr 4:122,840,643...122,854,981 		JBrowse link
G Mir106b microRNA 106b severity
disease_progression 		IEP miRNA:decreased expression:liver (human)
miRNA:increased expression:liver (human)
miRNA:increased expression:serum (human)
miRNA:increased expression:plasma (human) 		RGD PMID:28958640 PMID:31406464 PMID:28611524 PMID:25894380 RGD:15042874, RGD:15042877, RGD:15042876, RGD:15042875 NCBI chr 5:138,163,999...138,164,080
Ensembl chr 5:138,163,999...138,164,080 		JBrowse link
G Mir107 microRNA 107 treatment
onset 		ISO RNA:increased expression:liver:
RNA:decreased expression:liver: 		RGD PMID:30738047 PMID:28079796 PMID:26191213 PMID:27773820 RGD:14975277, RGD:14975300, RGD:11066920, RGD:14975278 NCBI chr19:34,798,087...34,798,173
Ensembl chr19:34,798,087...34,798,173 		JBrowse link
G Mir122 microRNA 122 severity ISO CTD Direct Evidence: marker/mechanism
mRNA:decreased expression:blood (human)
protein:decreased expression:liver (human)
associated with hepatitis B miRNA:decreased expression:liver 		CTD
RGD		 PMID:16924677 PMID:27528885 PMID:19584283 PMID:25422324 PMID:25269820 RGD:151361113, RGD:151356981, RGD:14401603, RGD:14394424 NCBI chr18:65,381,932...65,381,997
Ensembl chr18:65,381,932...65,381,997 		JBrowse link
G Mir125a microRNA 125a treatment
severity 		IEP
ISO 		RNA:increased expression:liver: RGD PMID:30257386 PMID:29951066 PMID:30257386 RGD:21403677, RGD:21403679, RGD:21403677 NCBI chr17:18,051,074...18,051,141
Ensembl chr17:18,051,074...18,051,141 		JBrowse link
G Mir127 microRNA 127 ISO miRNA:decreased expression:liver (human) RGD PMID:24854842 RGD:152995355 NCBI chr12:109,559,280...109,559,349
Ensembl chr12:109,559,280...109,559,349 		JBrowse link
G Mir130b microRNA 130b severity ISO miRNA:increased expression:liver RGD PMID:25387077 RGD:14694845 NCBI chr16:16,941,925...16,942,006
Ensembl chr16:16,941,925...16,942,006 		JBrowse link
G Mir133a-1 microRNA 133a-1 disease_progression ISO mRNA:decreased expression:liver (human)
human cells in mouse model 		RGD PMID:30086463 PMID:30086463 RGD:153344517, RGD:153344517 NCBI chr18:10,782,909...10,782,976
Ensembl chr18:10,782,909...10,782,976 		JBrowse link
G Mir133b microRNA 133b severity ISO mRNA:decreased expression:liver(human) RGD PMID:30391496 RGD:155804298 NCBI chr 1:20,752,993...20,753,111
Ensembl chr 1:20,752,993...20,753,111 		JBrowse link
G Mir136 microRNA 136 exacerbates ISO RNA:decreased expression:liver (human) RGD PMID:28849100 RGD:153345547 NCBI chr12:109,561,761...109,561,822
Ensembl chr12:109,561,761...109,561,822 		JBrowse link
G Mir139 microRNA 139 ISO RNA:decreased expression:liver (human) RGD PMID:30710422 RGD:153344549 NCBI chr 7:101,124,583...101,124,650
Ensembl chr 7:101,124,583...101,124,650 		JBrowse link
G Mir145a microRNA 145a severity IEP miRNA:decreased expression:liver (human) RGD PMID:30572504 RGD:15039395 NCBI chr18:61,780,896...61,780,965
Ensembl chr18:61,780,896...61,780,965 		JBrowse link
G Mir146 microRNA 146 sexual_dimorphism
susceptibility 		ISO associated with hepatitis B;miRNA:SNP:exon: (rs2910164) (human)
associated with hepatitis B;miRNA:SNP: (human) 		RGD PMID:18711148 PMID:24615520 PMID:24816919 RGD:126925148, RGD:126925187, RGD:126925158 NCBI chr11:43,265,224...43,265,288
Ensembl chr11:43,265,224...43,265,288 		JBrowse link
G Mir150 microRNA 150 ISO mRNA:decreased expression:liver (human) RGD PMID:30205391 RGD:153344577 NCBI chr 7:44,771,181...44,771,245
Ensembl chr 7:44,771,181...44,771,245 		JBrowse link
G Mir152 microRNA 152 disease_progression ISO miRNA:decreased expression:liver RGD PMID:30967300 PMID:26531720 RGD:19165146, RGD:21066331 NCBI chr11:96,741,219...96,741,291
Ensembl chr11:96,741,219...96,741,291 		JBrowse link
G Mir154 microRNA 154 ISO RNA:decreased expression:liver (human) RGD PMID:33195697 RGD:152995478 NCBI chr12:109,704,867...109,704,932
Ensembl chr12:109,704,867...109,704,932 		JBrowse link
G Mir155 microRNA 155 disease_progression ISO associated with hepatitis C;DNA:SNP: :rs767649 (human)
miRNA:increased expression:serum
miRNA:decreased expression:peripheral blood mononuclear cell 		RGD PMID:27035278 PMID:27531892 PMID:29528577 PMID:30710754 PMID:28074870 More... RGD:21079433, RGD:25671465, RGD:24922222, RGD:21081523, RGD:21079477, RGD:21079433 NCBI chr16:84,511,028...84,511,092
Ensembl chr16:84,511,028...84,511,092 		JBrowse link
G Mir18 microRNA 18 severity IEP miRNA:increased expression:liver (human)
associated with Hepatitis C, Chronic;miRNA:increased expression:serum (human)
associated with hepatitis B;miRNA:increased expression:liver (human) 		RGD PMID:19027010 PMID:29455432 PMID:24975878 PMID:30191950 PMID:30519035 RGD:15039398, RGD:15039404, RGD:15039401, RGD:15039389, RGD:15039400 NCBI chr14:115,281,283...115,281,378
Ensembl chr14:115,281,283...115,281,378 		JBrowse link
G Mir181c microRNA 181c IEP miRNA:decreased expression:liver (human) RGD PMID:31114379 RGD:15042894 NCBI chr 8:84,905,502...84,905,590
Ensembl chr 8:84,905,502...84,905,590 		JBrowse link
G Mir18b microRNA 18b severity IEP miRNA:increased expression:liver (human) RGD PMID:23496901 RGD:15039403 NCBI chr  X:51,831,208...51,831,290
Ensembl chr  X:51,831,208...51,831,290 		JBrowse link
G Mir193a microRNA 193a disease_progression
exacerbates 		ISO miRNA:decreased expression:liver (human)
DNA:hypomethylation
RNA:increased expression:blood serum (human) 		RGD PMID:26263159 PMID:28036298 PMID:32960907 PMID:30710422 RGD:11070076, RGD:153344564, RGD:153344563, RGD:153344549 NCBI chr11:79,602,795...79,602,860
Ensembl chr11:79,602,795...79,602,860 		JBrowse link
G Mir195a microRNA 195a severity IEP
IMP 		miRNA:decreased expression:liver (human)
miRNA:decreased expression:liver (mouse) 		RGD PMID:25607636 PMID:25607636 RGD:15042896, RGD:15042896 NCBI chr11:70,125,868...70,125,961
Ensembl chr11:70,125,868...70,125,961 		JBrowse link
G Mir196a-2 microRNA 196a-2 susceptibility ISO associated with hepatitis B, chronic; DNA:SNP: : (rs12304647)
DNA:SNP: : (rs11614913) 		RGD PMID:21692953 PMID:24248733 RGD:14401594 RGD:14401595 NCBI chr15:102,881,785...102,881,869
Ensembl chr15:102,881,785...102,881,869 		JBrowse link
G Mir199b microRNA 199b disease_progression ISO miRNA:decreased expression:liver RGD PMID:30536310 RGD:14694833 NCBI chr 2:32,208,472...32,208,581
Ensembl chr 2:32,208,472...32,208,581 		JBrowse link
G Mir200b microRNA 200b treatment
disease_progression 		ISO mRNA:decreased expression:liver
DNA:hypermethylation:promoter 		RGD PMID:26919246 PMID:28383782 PMID:28383782 PMID:28383782 PMID:26919246 RGD:14928318, RGD:14928322, RGD:14928322, RGD:14928322, RGD:14928318 NCBI chr 4:156,140,138...156,140,207
Ensembl chr 4:156,140,138...156,140,207 		JBrowse link
G Mir20a microRNA 20a ISO associated with Human Viral Hepatitis RGD PMID:30623908 RGD:25823145 NCBI chr14:115,281,589...115,281,695
Ensembl chr14:115,281,589...115,281,695 		JBrowse link
G Mir212 microRNA 212 disease_progression
ameliorates 		ISO RGD PMID:25965836 PMID:25965836 RGD:11054501, RGD:11054501 NCBI chr11:75,064,214...75,064,304
Ensembl chr11:75,064,214...75,064,304 		JBrowse link
G Mir21a microRNA 21a treatment
severity 		ISO miRNA:increased expression:liver RGD PMID:20447717 PMID:21749846 PMID:24963487 RGD:14695022, RGD:41404642, RGD:40925952 NCBI chr11:86,474,893...86,474,984
Ensembl chr11:86,474,893...86,474,984 		JBrowse link
G Mir22 microRNA 22 severity
disease_progression 		ISO in male; RNA:increased expression:liver: RGD PMID:23766411 PMID:21750200 PMID:27811373 RGD:14700874, RGD:14700876, RGD:14700875 NCBI chr11:75,354,542...75,354,636
Ensembl chr11:75,354,542...75,354,636 		JBrowse link
G Mir221 microRNA 221 disease_progression
treatment 		ISO
IEP 		RGD PMID:25817558 PMID:31801250 PMID:28096271 PMID:28096271 PMID:28096271 More... RGD:11086123, RGD:151893509, RGD:18337275, RGD:18337275, RGD:18337275, RGD:18337273, RGD:18337267, RGD:18337267 NCBI chr  X:19,012,533...19,012,627
Ensembl chr  X:19,012,533...19,012,627 		JBrowse link
G Mir222 microRNA 222 disease_progression
severity 		ISO RGD PMID:24124720 PMID:20103675 RGD:151709003, RGD:151709004 NCBI chr  X:19,013,132...19,013,210
Ensembl chr  X:19,013,132...19,013,210 		JBrowse link
G Mir223 microRNA 223 disease_progression IMP
ISO 		associated with high-fat diet,
RNA:increased expression:serum:
associated with Chronic Hepatitis B; RNA:decreased expression:serum:
associated with Chronic HepatitisC; RNA:decreased expression:serum: 		RGD PMID:30964207 PMID:21229610 PMID:24595450 PMID:25391771 PMID:28982915 RGD:21408549, RGD:21408591, RGD:21408583, RGD:21408580, RGD:21408578 NCBI chr  X:95,286,423...95,286,532
Ensembl chr  X:95,286,423...95,286,532 		JBrowse link
G Mir224 microRNA 224 severity IEP miRNA:increased expression:liver (human)
miRNA:increased expression:plasma (human)
associated with hepatitis B;miRNA:increased expression:liver (human) 		RGD PMID:23922662 PMID:27462777 PMID:24923856 PMID:23913306 PMID:22459148 RGD:18182921, RGD:18182926, RGD:18182924, RGD:18182923, RGD:18182922 NCBI chr  X:71,304,637...71,304,718
Ensembl chr  X:71,304,637...71,304,718 		JBrowse link
G Mir23a microRNA 23a ISO miRNA:increased expression:liver RGD PMID:22318941 RGD:14694846 NCBI chr 8:84,935,147...84,935,221
Ensembl chr 8:84,935,147...84,935,221 		JBrowse link
G Mir23b microRNA 23b ISO DNA:hypermethylation RGD PMID:28036298 RGD:153344564 NCBI chr13:63,448,298...63,448,371
Ensembl chr13:63,448,298...63,448,371 		JBrowse link
G Mir25 microRNA 25 severity IEP miRNA:increased expression:liver (human)
associated with hepatitis B;miRNA:increased expression:liver (human)
associated with hepatitis B;miRNA:increased expression:serum (human) 		RGD PMID:30191950 PMID:27298561 PMID:21098710 PMID:24593846 RGD:15039389, RGD:15042853, RGD:15042899, RGD:15042897 NCBI chr 5:138,163,583...138,163,666
Ensembl chr 5:138,163,583...138,163,666 		JBrowse link
G Mir27a microRNA 27a severity
treatment 		ISO human cell line in a mouse model
human miRNA and cell line in a mouse model 		RGD PMID:29143999 PMID:30083261 RGD:14696659, RGD:14696660 NCBI chr 8:84,935,301...84,935,387
Ensembl chr 8:84,935,301...84,935,387 		JBrowse link
G Mir29a microRNA 29a severity ISO associated with hepatitis B;miRNA:increased expression:liver (human) RGD PMID:23285022 PMID:23285022 RGD:15042850, RGD:15042850 NCBI chr 6:31,039,595...31,039,682
Ensembl chr 6:31,039,595...31,039,682 		JBrowse link
G Mir302d microRNA 302d ameliorates ISO Human cells in mouse model RGD PMID:28352351 RGD:152998975 NCBI chr 3:127,339,273...127,339,338
Ensembl chr 3:127,339,273...127,339,338 		JBrowse link
G Mir31 microRNA 31 severity ISO RNA:decreased expression:liver (human)
miRNA:decreased expression:liver (rat)
miRNA:decreased expression:liver (human) 		RGD PMID:28623129 PMID:25797269 PMID:25797269 RGD:152998991, RGD:11085965, RGD:11085965 NCBI chr 4:88,828,794...88,828,899
Ensembl chr 4:88,828,794...88,828,899 		JBrowse link
G Mir340 microRNA 340 ISO miRNA:decreased expression:liver RGD PMID:27998770 RGD:18936991 NCBI chr11:49,960,529...49,960,626
Ensembl chr11:49,960,529...49,960,626 		JBrowse link
G Mir34a microRNA 34a treatment ISO human cell line in a mouse model
miRNA:decreased expression:liver 		RGD PMID:25217526 PMID:29328457 RGD:14694835, RGD:14694836 NCBI chr 4:150,152,911...150,153,012
Ensembl chr 4:150,152,911...150,153,012 		JBrowse link
G Mir411 microRNA 411 disease_progression ISO mRNA:decreased expression:liver (human) RGD PMID:30086881 RGD:152999437 NCBI chr12:109,676,609...109,676,690
Ensembl chr12:109,676,609...109,676,690 		JBrowse link
G Mir432 microRNA 432 disease_progression ISO mRNA:decreased expression:liver (human) RGD PMID:25797263 PMID:30086881 PMID:33675609 RGD:11087457, RGD:152999437, RGD:152999436 NCBI chr12:109,561,390...109,561,464
Ensembl chr12:109,561,390...109,561,464 		JBrowse link
G Mir455 microRNA 455 ISO CTD Direct Evidence: marker/mechanism CTD PMID:35286011 NCBI chr 4:63,175,088...63,175,169
Ensembl chr 4:63,175,088...63,175,169 		JBrowse link
G Mir494 microRNA 494 disease_progression ISO RGD PMID:25820676 RGD:155900754 NCBI chr12:109,681,752...109,681,836
Ensembl chr12:109,681,752...109,681,836 		JBrowse link
G Mir539 microRNA 539 ISO CTD Direct Evidence: therapeutic CTD PMID:27717846 NCBI chr12:109,694,563...109,694,636
Ensembl chr12:109,694,563...109,694,636 		JBrowse link
G Mir615 microRNA 615 ISO CTD Direct Evidence: marker/mechanism CTD PMID:22819824 NCBI chr15:102,923,342...102,923,433
Ensembl chr15:102,923,342...102,923,433 		JBrowse link
G Mir665 microRNA 665 disease_progression ISO mRNA:increased expression:liver (human)
associated with metastasis; human cells in mouse model 		RGD PMID:30237408 PMID:30237408 RGD:151361293, RGD:151361293 NCBI chr12:109,552,748...109,552,841
Ensembl chr12:109,552,748...109,552,841 		JBrowse link
G Mir93 microRNA 93 severity IEP associated with hepatitis B;miRNA:increased expression:liver (human) RGD PMID:27298561 PMID:28592130 RGD:15042853, RGD:15042900 NCBI chr 5:138,163,785...138,163,872
Ensembl chr 5:138,163,785...138,163,872 		JBrowse link
G Mir96 microRNA 96 severity IEP miRNA:increased expression:liver (human) RGD PMID:28892647 PMID:25813403 RGD:15042901, RGD:15042902 NCBI chr 6:30,169,445...30,169,550
Ensembl chr 6:30,169,445...30,169,550 		JBrowse link
G Mirlet7c-1 microRNA let7c-1 ISO miRNA:decreased expression:liver RGD PMID:22289550 RGD:14695021 NCBI chr16:77,396,545...77,396,638
Ensembl chr16:77,396,545...77,396,638 		JBrowse link
G Mki67 antigen identified by monoclonal antibody Ki 67 ISO CTD Direct Evidence: marker/mechanism CTD PMID:28284560 NCBI chr 7:135,291,513...135,318,286
Ensembl chr 7:135,291,513...135,318,090 		JBrowse link
G Mlxipl MLX interacting protein-like ISO CTD Direct Evidence: marker/mechanism CTD PMID:21147110 NCBI chr 5:135,118,744...135,168,622
Ensembl chr 5:135,118,744...135,167,236 		JBrowse link
G Mme membrane metallo endopeptidase ISO RGD PMID:8302012 RGD:13801035 NCBI chr 3:63,202,632...63,291,134
Ensembl chr 3:63,148,958...63,293,451 		JBrowse link
G Mmp14 matrix metallopeptidase 14 (membrane-inserted) ISO CTD Direct Evidence: marker/mechanism CTD PMID:33010264 NCBI chr14:54,669,055...54,679,913
Ensembl chr14:54,669,069...54,682,821 		JBrowse link
G Mmp2 matrix metallopeptidase 2 ISO CTD Direct Evidence: marker/mechanism CTD PMID:20084675 NCBI chr 8:93,553,920...93,580,049
Ensembl chr 8:93,553,919...93,580,048 		JBrowse link
G Mmp9 matrix metallopeptidase 9 IMP
ISO 		CTD Direct Evidence: marker/mechanism CTD
RGD		 PMID:20084675 PMID:21681821 RGD:8547864 NCBI chr 2:164,782,246...164,797,770
Ensembl chr 2:164,782,700...164,797,770 		JBrowse link
G Mogat2 monoacylglycerol O-acyltransferase 2 ISO CTD Direct Evidence: marker/mechanism CTD PMID:28284560 NCBI chr 7:98,868,291...98,887,818
Ensembl chr 7:98,868,291...98,887,826 		JBrowse link
G Mpl myeloproliferative leukemia virus oncogene IMP human cells in mouse model RGD PMID:23157389 RGD:126925755 NCBI chr 4:118,299,609...118,314,771
Ensembl chr 4:118,299,612...118,314,710 		JBrowse link
G Mpo myeloperoxidase disease_progression
susceptibility 		ISO CTD Direct Evidence: marker/mechanism
associated with liver cirrhosis with Hepatitis C;DNA:SNP:promoter:-463G>A(human)
associated with liver cirrhosis; DNA:SNP:promoter:-463G>A( rs2333227)(human) 		CTD
RGD		 PMID:19731237 PMID:21907168 PMID:19731237 RGD:27095879, RGD:26923907 NCBI chr11:87,684,610...87,695,238
Ensembl chr11:87,684,407...87,695,239 		JBrowse link
G Mro maestro ISO CTD Direct Evidence: marker/mechanism CTD PMID:28284560 NCBI chr18:73,992,465...74,014,405
Ensembl chr18:73,992,456...74,014,404 		JBrowse link
G Msh3 mutS homolog 3 ISO ClinVar Annotator: match by term: Hepatocellular cancer ClinVar PMID:28492532 NCBI chr13:92,348,387...92,491,515
Ensembl chr13:92,348,380...92,491,511 		JBrowse link
G Msh5 mutS homolog 5 ISO CTD Direct Evidence: marker/mechanism CTD PMID:28284560 NCBI chr17:35,247,581...35,267,842
Ensembl chr17:35,247,581...35,265,721 		JBrowse link
G mt-Co1 cytochrome c oxidase I, mitochondrial ISO RGD PMID:2548155 RGD:2302301 NCBI chr MT:5,328...6,872
Ensembl chr MT:5,328...6,872 		JBrowse link
G mt-Nd5 NADH dehydrogenase 5, mitochondrial ISO mRNA:increased expression:liver
CTD Direct Evidence: marker/mechanism 		CTD
RGD		 PMID:2507335 PMID:2507335 RGD:2302316 NCBI chr MT:11,742...13,565
Ensembl chr MT:11,742...13,565 		JBrowse link
G Mt2 metallothionein 2 ISO CTD Direct Evidence: marker/mechanism CTD PMID:17363595 PMID:28284560 NCBI chr 8:94,899,246...94,900,195
Ensembl chr 8:94,899,292...94,900,196 		JBrowse link
G Mtbp Mdm2, transformed 3T3 cell double minute p53 binding protein ISO CTD Direct Evidence: marker/mechanism CTD PMID:29765550 NCBI chr15:55,420,800...55,489,819
Ensembl chr15:55,420,804...55,489,819 		JBrowse link
G Mtdh metadherin treatment ISO human cells in a mouse model RGD PMID:26351209 RGD:11096879 NCBI chr15:34,082,613...34,143,683
Ensembl chr15:34,082,840...34,145,770 		JBrowse link
G Mthfd2 methylenetetrahydrofolate dehydrogenase (NAD+ dependent), methenyltetrahydrofolate cyclohydrolase ISO mRNA:increased expression:liver RGD PMID:3878730 RGD:2302305 NCBI chr 6:83,282,686...83,302,926
Ensembl chr 6:83,282,673...83,302,890 		JBrowse link
G Mthfr methylenetetrahydrofolate reductase susceptibility
onset
disease_progression 		ISO DNA:SNP,haplotype: :677C>T, 1298A>C(human)
DNA:SNPs: :677C>T, 1298A>C(human)
DNA:SNP: :1298A>C(human)
DNA:SNP: :677C>T(human) 		RGD PMID:17503006 PMID:17659576 PMID:19035314 PMID:23996892 RGD:14696703, RGD:14696708, RGD:14696707, RGD:14696704 NCBI chr 4:148,123,534...148,144,019
Ensembl chr 4:148,123,534...148,144,008 		JBrowse link
G Mtor mechanistic target of rapamycin kinase severity ISO CTD Direct Evidence: marker/mechanism
mRNA, protein:increased expression:liver (human) 		CTD
RGD		 PMID:21147110 PMID:25371154 RGD:152995471 NCBI chr 4:148,533,039...148,642,142
Ensembl chr 4:148,533,068...148,642,140 		JBrowse link
G Mtrr 5-methyltetrahydrofolate-homocysteine methyltransferase reductase susceptibility ISO DNA:SNP: :66A>G(human) RGD PMID:19035314 RGD:14696707 NCBI chr13:68,708,897...68,730,273
Ensembl chr13:68,708,899...68,730,268 		JBrowse link
G Mvk mevalonate kinase ISO CTD Direct Evidence: marker/mechanism CTD PMID:21147110 NCBI chr 5:114,582,324...114,598,652
Ensembl chr 5:114,582,330...114,598,652 		JBrowse link
G Mybl2 myeloblastosis oncogene-like 2 ISO CTD Direct Evidence: marker/mechanism CTD PMID:28284560 NCBI chr 2:162,896,246...162,926,608
Ensembl chr 2:162,896,607...162,926,608 		JBrowse link
G Myc myelocytomatosis oncogene severity
treatment 		IMP
IAGP
ISO 		OMIM:114550
CTD Direct Evidence: marker/mechanism
mRNA:increased expression:liver (human)
mRNA:increased expression:liver (rat) 		MouseDO
CTD
RGD		 PMID:9029167 PMID:12029619 PMID:15565109 PMID:29698666 PMID:21644509 More... RGD:6903288, RGD:7241004, RGD:7240695, RGD:7240567 NCBI chr15:61,857,190...61,862,210
Ensembl chr15:61,857,240...61,862,223 		JBrowse link
G Myd88 myeloid differentiation primary response gene 88 exacerbates
treatment
ameliorates 		ISO
IMP 		mRNA:increased expression:liver (human)
human gene and cell in a mouse model
mouse cell line in a mouse model
protein:increased expression:liver (human)
human cell line in a mouse model
protein, mRNA:decreased expression:liver (human) 		RGD PMID:29022910 PMID:24603331 PMID:31074165 PMID:26985932 PMID:31068809 More... RGD:150520022, RGD:150530285, RGD:150524334, RGD:150524330, RGD:150524329, RGD:150524327, RGD:150521534, RGD:150521532, RGD:150520169 NCBI chr 9:119,165,000...119,169,084
Ensembl chr 9:119,165,000...119,170,477 		JBrowse link
G Nat2 N-acetyltransferase 2 (arylamine N-acetyltransferase) ISO CTD Direct Evidence: marker/mechanism CTD PMID:28284560 NCBI chr 8:67,947,527...67,955,296
Ensembl chr 8:67,947,510...67,955,236 		JBrowse link
G Nbn nibrin ISO ClinVar Annotator: match by term: Hepatocellular cancer ClinVar PMID:9590180 PMID:9590181 PMID:9620777 PMID:10398434 PMID:10799436 More... NCBI chr 4:15,955,388...15,992,589
Ensembl chr 4:15,957,925...15,992,589 		JBrowse link
G Ncapg non-SMC condensin I complex, subunit G ISO CTD Direct Evidence: marker/mechanism CTD PMID:28284560 NCBI chr 5:45,827,212...45,858,491
Ensembl chr 5:45,827,261...45,857,888 		JBrowse link
G Ncaph non-SMC condensin I complex, subunit H ISO CTD Direct Evidence: marker/mechanism CTD PMID:28284560 NCBI chr 2:126,945,729...126,975,857
Ensembl chr 2:126,945,729...126,975,874 		JBrowse link
G Ncoa2 nuclear receptor coactivator 2 exacerbates IMP RGD PMID:28273073 PMID:22556267 RGD:153002573, RGD:153002576 NCBI chr 1:13,209,329...13,444,451
Ensembl chr 1:13,209,329...13,444,307 		JBrowse link
G Ndc80 NDC80 kinetochore complex component ISO CTD Direct Evidence: marker/mechanism CTD PMID:28284560 NCBI chr17:71,803,095...71,833,852
Ensembl chr17:71,803,095...71,833,852 		JBrowse link
G Neil3 nei like 3 (E. coli) disease_progression ISO CTD Direct Evidence: marker/mechanism
mRNA:increased expression:liver (human) 		CTD
RGD		 PMID:28284560 PMID:35693827 RGD:153344586 NCBI chr 8:54,039,902...54,092,100
Ensembl chr 8:54,039,902...54,092,100 		JBrowse link
G Nek2 NIMA (never in mitosis gene a)-related expressed kinase 2 ISO CTD Direct Evidence: marker/mechanism CTD PMID:28284560 NCBI chr 1:191,553,622...191,565,161
Ensembl chr 1:191,553,556...191,565,162 		JBrowse link
G Nf2 neurofibromin 2 disease_progression ISO DNA, protein:SNP, increased expression:intron, liver
protein:decreased expression:liver 		RGD PMID:29130106 PMID:26443326 PMID:27289045 RGD:150530489, RGD:11076529, RGD:150530504 NCBI chr11:4,715,845...4,799,544
Ensembl chr11:4,715,845...4,799,536 		JBrowse link
G Nfe2l1 nuclear factor, erythroid derived 2,-like 1 IAGP OMIM:114550 MouseDO NCBI chr11:96,708,239...96,720,810
Ensembl chr11:96,708,240...96,720,794 		JBrowse link
G Nfe2l2 nuclear factor, erythroid derived 2, like 2 ISO CTD Direct Evidence: marker/mechanism CTD
RGD		 PMID:22561517 PMID:31546024 RGD:21201310 NCBI chr 2:75,505,860...75,535,007
Ensembl chr 2:75,505,857...75,534,985 		JBrowse link
G Nfkb1 nuclear factor of kappa light polypeptide gene enhancer in B cells 1, p105 disease_progression
treatment 		ISO associated with Chronic Hepatitis B;DNA:insertion/deletion:3'utr: -94ins/delATTG (rs28720239) (human) RGD PMID:19797428 PMID:25999787 RGD:40400751, RGD:152177911 NCBI chr 3:135,290,416...135,397,422
Ensembl chr 3:135,290,416...135,397,308 		JBrowse link
G Nfkbia nuclear factor of kappa light polypeptide gene enhancer in B cells inhibitor, alpha susceptibility
disease_progression 		ISO CTD Direct Evidence: therapeutic
associated with hepatitis B;DNA:SNP:promoter:-826C>T (rs2233406) (human)
associated with Chronic Hepatitis B;DNA:SNPs,haplotype:3'utr,promoter: 826C>T,881A>G (rs2233406,rs3138053) (human) 		CTD
RGD		 PMID:22022477 PMID:25223483 PMID:19797428 RGD:40902986, RGD:40400751 NCBI chr12:55,536,194...55,539,432
Ensembl chr12:55,536,195...55,539,432 		JBrowse link
G Nkx3-1 NK3 homeobox 1 treatment ISO mRNA:decreased expression:liver
human gene in a mouse model 		RGD PMID:28972178 PMID:28972178 RGD:14401599, RGD:14401599 NCBI chr14:69,428,141...69,432,107
Ensembl chr14:69,428,087...69,432,111 		JBrowse link
G Nlrc3 NLR family, CARD domain containing 3 ISO CTD Direct Evidence: marker/mechanism CTD PMID:30081150 NCBI chr16:3,762,871...3,796,881
Ensembl chr16:3,762,871...3,794,496 		JBrowse link
G Nlrc5 NLR family, CARD domain containing 5 ISO protein:increased expression:liver RGD PMID:27338800 RGD:15003194 NCBI chr 8:95,160,963...95,253,900
Ensembl chr 8:95,160,984...95,253,900 		JBrowse link
G Nme1 NME/NM23 nucleoside diphosphate kinase 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:21472284 NCBI chr11:93,849,751...93,859,341
Ensembl chr11:93,847,805...93,859,347 		JBrowse link
G Nnmt nicotinamide N-methyltransferase ISO CTD Direct Evidence: marker/mechanism CTD PMID:28284560 NCBI chr 9:48,448,905...48,518,958
Ensembl chr 9:48,503,177...48,516,453 		JBrowse link
G Nos2 nitric oxide synthase 2, inducible treatment ISO RGD PMID:25999787 RGD:152177911 NCBI chr11:78,811,613...78,851,052
Ensembl chr11:78,811,613...78,851,080 		JBrowse link
G Notch3 notch 3 ISO CTD Direct Evidence: marker/mechanism CTD PMID:28284560 NCBI chr17:32,339,794...32,385,869
Ensembl chr17:32,339,794...32,385,826 		JBrowse link
G Nr0b2 nuclear receptor subfamily 0, group B, member 2 ISO CTD Direct Evidence: marker/mechanism CTD PMID:23811326 NCBI chr 4:133,280,687...133,283,997
Ensembl chr 4:133,280,687...133,283,847 		JBrowse link
G Nr1h2 nuclear receptor subfamily 1, group H, member 2 ISO CTD Direct Evidence: marker/mechanism CTD PMID:21147110 NCBI chr 7:44,199,040...44,204,928
Ensembl chr 7:44,199,040...44,203,375 		JBrowse link
G Nr1h4 nuclear receptor subfamily 1, group H, member 4 ISO
IMP
IAGP 		CTD Direct Evidence: marker/mechanism
intestinally expressed human gene in mouse model
mRNA:splice variant(s):liver (human)
OMIM:114550 		CTD
MouseDO
RGD		 PMID:23811326 PMID:25496033 PMID:24954587 PMID:23213087 PMID:23811326 RGD:14928334, RGD:14928330, RGD:14696796 NCBI chr10:89,290,096...89,369,484
Ensembl chr10:89,290,096...89,369,447 		JBrowse link
G Nras neuroblastoma ras oncogene disease_progression
severity 		ISO human gene in mouse model
mRNA, protein:increased expression:liver (mouse, human) 		RGD PMID:21993994 PMID:30685691 RGD:14696775, RGD:14696793 NCBI chr 3:102,965,643...102,975,230
Ensembl chr 3:102,965,601...102,975,230 		JBrowse link
G Nrg1 neuregulin 1 disease_progression ISO associated with hepatitis C;mRNA:altered expression:liver (human
mRNA:increased expression:liver (human) 		RGD PMID:17393520 PMID:27514687 RGD:39456104, RGD:39456110 NCBI chr 8:32,299,493...33,381,858
Ensembl chr 8:32,304,579...33,374,825
Ensembl chr 8:32,304,579...33,374,825 		JBrowse link
G Nrp1 neuropilin 1 disease_progression ISO protein:decreased expression:liver RGD PMID:25333267 RGD:126848812 NCBI chr 8:129,085,553...129,231,957
Ensembl chr 8:129,085,085...129,229,844 		JBrowse link
G Nuf2 NUF2, NDC80 kinetochore complex component disease_progression
treatment 		ISO CTD Direct Evidence: marker/mechanism CTD
RGD		 PMID:28284560 PMID:31933938 PMID:30653265 RGD:28912742, RGD:28867240 NCBI chr 1:169,325,503...169,359,033
Ensembl chr 1:169,325,503...169,359,033 		JBrowse link
G Nusap1 nucleolar and spindle associated protein 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:28284560 NCBI chr 2:119,449,205...119,480,646
Ensembl chr 2:119,448,779...119,481,725 		JBrowse link
G Oit3 oncoprotein induced transcript 3 ISO CTD Direct Evidence: marker/mechanism CTD PMID:28284560 NCBI chr10:59,258,782...59,277,601
Ensembl chr10:59,258,780...59,277,600 		JBrowse link
G Olfml2a olfactomedin-like 2A ISO CTD Direct Evidence: marker/mechanism CTD PMID:28284560 NCBI chr 2:38,821,992...38,850,597
Ensembl chr 2:38,821,990...38,853,765 		JBrowse link
G Olfml2b olfactomedin-like 2B ISO CTD Direct Evidence: marker/mechanism CTD PMID:28284560 NCBI chr 1:170,472,101...170,510,356
Ensembl chr 1:170,472,101...170,510,358 		JBrowse link
G Orc1 origin recognition complex, subunit 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:28284560 NCBI chr 4:108,436,651...108,472,030
Ensembl chr 4:108,436,620...108,472,030 		JBrowse link
G Otc ornithine transcarbamylase severity ISO mRNA:altered expression:liver tumor (human) RGD PMID:30901224 RGD:152995286 NCBI chr  X:10,118,584...10,187,275
Ensembl chr  X:10,118,544...10,187,263 		JBrowse link
G Pafah1b1 platelet-activating factor acetylhydrolase, isoform 1b, subunit 1 disease_progression ISO mRNA,protein:decreased expression:liver: RGD PMID:21569763 RGD:12790589 NCBI chr11:74,564,775...74,615,210
Ensembl chr11:74,564,775...74,615,496 		JBrowse link
G Pamr1 peptidase domain containing associated with muscle regeneration 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:28284560 NCBI chr 2:102,380,325...102,473,386
Ensembl chr 2:102,380,357...102,473,386 		JBrowse link
G Park7 Parkinson disease (autosomal recessive, early onset) 7 ISO CTD Direct Evidence: marker/mechanism CTD PMID:21472284 NCBI chr 4:150,981,590...150,994,378
Ensembl chr 4:150,981,590...150,998,894 		JBrowse link
G Parp1 poly (ADP-ribose) polymerase family, member 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:18695907 NCBI chr 1:180,396,456...180,428,564
Ensembl chr 1:180,396,489...180,428,819 		JBrowse link
G Pbk PDZ binding kinase ISO CTD Direct Evidence: marker/mechanism CTD PMID:28284560 NCBI chr14:66,043,337...66,055,271
Ensembl chr14:66,043,286...66,055,271 		JBrowse link
G Pck1 phosphoenolpyruvate carboxykinase 1, cytosolic ISO CTD Direct Evidence: marker/mechanism CTD PMID:19363144 PMID:28284560 NCBI chr 2:172,994,866...173,001,067
Ensembl chr 2:172,994,841...173,001,066 		JBrowse link
G Pclaf PCNA clamp associated factor ISO CTD Direct Evidence: marker/mechanism CTD PMID:28284560 NCBI chr 9:65,797,605...65,810,833
Ensembl chr 9:65,797,519...65,810,548 		JBrowse link
G Pcna proliferating cell nuclear antigen treatment ISO protein:increased expression:liver: RGD PMID:23219601 PMID:25999787 RGD:10448993, RGD:152177911 NCBI chr 2:132,091,206...132,095,100
Ensembl chr 2:132,091,082...132,095,234 		JBrowse link
G Pdcd1 programmed cell death 1 disease_progression ISO associated with hepatitis B;DNA:SNP: : +8669 A>G (human) RGD PMID:27034168 PMID:21912640 RGD:40818257, RGD:41410800 NCBI chr 1:93,966,027...93,980,278
Ensembl chr 1:93,966,027...93,980,278 		JBrowse link
G Pdgfb platelet derived growth factor, B polypeptide ISO CTD Direct Evidence: marker/mechanism CTD PMID:20506153 NCBI chr15:79,880,066...79,899,178
Ensembl chr15:79,880,075...79,899,178 		JBrowse link
G Pdgfrl platelet-derived growth factor receptor-like ISO CTD Direct Evidence: marker/mechanism
ClinVar Annotator: match by term: Hepatocellular carcinoma 		OMIM
CTD
ClinVar		 PMID:7898930 NCBI chr 8:41,379,270...41,443,819
Ensembl chr 8:41,379,249...41,443,822 		JBrowse link
G Pdia3 protein disulfide isomerase associated 3 ISO CTD Direct Evidence: marker/mechanism CTD PMID:21472284 NCBI chr 2:121,244,383...121,269,168
Ensembl chr 2:121,244,256...121,269,168 		JBrowse link
G Pdk4 pyruvate dehydrogenase kinase, isoenzyme 4 ISO CTD Direct Evidence: marker/mechanism CTD PMID:28003426 NCBI chr 6:5,483,351...5,496,278
Ensembl chr 6:5,483,351...5,496,309 		JBrowse link
G Pfas phosphoribosylformylglycinamidine synthase (FGAR amidotransferase) ISO protein:increased expression:liver RGD PMID:6722784 RGD:5135276 NCBI chr11:68,876,527...68,899,286
Ensembl chr11:68,876,523...68,899,286 		JBrowse link
G Pfn2 profilin 2 disease_progression ISO mRNA:increased expression:liver (human) RGD PMID:35693827 RGD:153344586 NCBI chr 3:57,749,316...57,755,178
Ensembl chr 3:57,749,316...57,755,500 		JBrowse link
G Pgd phosphogluconate dehydrogenase ISO CTD Direct Evidence: marker/mechanism CTD PMID:19363144 NCBI chr 4:149,234,448...149,251,162
Ensembl chr 4:149,234,448...149,251,228 		JBrowse link
G Pgk1 phosphoglycerate kinase 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:21472284 NCBI chr  X:105,230,706...105,247,305
Ensembl chr  X:105,230,706...105,247,305 		JBrowse link
G Phb1 prohibitin 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:21472284 NCBI chr11:95,557,783...95,571,599
Ensembl chr11:95,557,783...95,571,599 		JBrowse link
G Phf6 PHD finger protein 6 exacerbates ISO mRNA:increased expression:liver (human) RGD PMID:31329335 PMID:30888215 RGD:155260288, RGD:155260308 NCBI chr  X:52,001,091...52,045,838
Ensembl chr  X:52,001,143...52,045,820 		JBrowse link
G Phlda1 pleckstrin homology like domain, family A, member 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:28284560 NCBI chr10:111,342,147...111,344,510
Ensembl chr10:111,342,147...111,344,506 		JBrowse link
G Pik3ca phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha treatment
susceptibility
no_association
severity 		ISO ClinVar Annotator: match by term: Hepatocellular cancer | ClinVar Annotator: match by term: Hepatocellular carcinoma
CTD Direct Evidence: marker/mechanism
DNA:SNPs: :rs17849071,rs17849079(human)
DNA:mutation:exon:
DNA:mutations:exons: 		ClinVar
CTD
OMIM
RGD		 PMID:15016963 PMID:15520168 PMID:15608678 PMID:17376864 PMID:17673550 More... RGD:2290476, RGD:152177911, RGD:11556371, RGD:14402405, RGD:14402404 NCBI chr 3:32,451,203...32,520,256
Ensembl chr 3:32,451,820...32,522,635 		JBrowse link
G Pik3cb phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit beta treatment ISO RGD PMID:25999787 RGD:152177911 NCBI chr 9:98,920,455...99,022,264
Ensembl chr 9:98,918,707...99,022,674 		JBrowse link
G Pik3r1 phosphoinositide-3-kinase regulatory subunit 1 treatment ISO RGD PMID:31801250 PMID:25999787 RGD:151893509, RGD:152177911 NCBI chr13:101,817,269...101,904,725
Ensembl chr13:101,817,071...101,904,725 		JBrowse link
G Pik3r2 phosphoinositide-3-kinase regulatory subunit 2 treatment ISO RGD PMID:25999787 RGD:152177911 NCBI chr 8:71,220,820...71,229,356
Ensembl chr 8:71,220,820...71,229,357 		JBrowse link
G Pik3r3 phosphoinositide-3-kinase regulatory subunit 3 treatment ISO RGD PMID:25999787 RGD:152177911 NCBI chr 4:116,078,593...116,160,253
Ensembl chr 4:116,078,815...116,160,253
Ensembl chr 4:116,078,815...116,160,253 		JBrowse link
G Pinx1 PIN2/TERF1 interacting, telomerase inhibitor 1 disease_progression ISO associated with Chronic Hepatitis B; DNA:SNP::rs1469557(human) RGD PMID:27221889 RGD:152977752 NCBI chr14:64,097,728...64,157,311
Ensembl chr14:64,097,813...64,157,308 		JBrowse link
G Pitpnm3 PITPNM family member 3 ISO CTD Direct Evidence: marker/mechanism CTD PMID:28284560 NCBI chr11:71,938,354...72,026,715
Ensembl chr11:71,938,354...72,026,604 		JBrowse link
G Pitx1 paired-like homeodomain transcription factor 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:28284560 NCBI chr13:55,972,857...55,984,002
Ensembl chr13:55,972,864...55,984,005 		JBrowse link
G Pkm pyruvate kinase, muscle ISO CTD Direct Evidence: marker/mechanism CTD PMID:19363144 NCBI chr 9:59,563,859...59,586,655
Ensembl chr 9:59,563,651...59,586,658 		JBrowse link
G Pkmyt1 protein kinase, membrane associated tyrosine/threonine 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:28284560 NCBI chr17:23,945,385...23,955,709
Ensembl chr17:23,945,310...23,955,709 		JBrowse link
G Pkp1 plakophilin 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:21472284 NCBI chr 1:135,799,132...135,846,945
Ensembl chr 1:135,799,133...135,846,945 		JBrowse link
G Plac8 placenta-specific 8 ISO CTD Direct Evidence: marker/mechanism CTD PMID:28284560 NCBI chr 5:100,699,455...100,720,119
Ensembl chr 5:100,701,591...100,720,111 		JBrowse link
G Plau plasminogen activator, urokinase IAGP OMIM:114550 MouseDO NCBI chr14:20,886,730...20,893,456
Ensembl chr14:20,886,728...20,893,453 		JBrowse link
G Plcg1 phospholipase C, gamma 1 ameliorates ISO human cell line in a mouse model RGD PMID:30623526 RGD:151356937 NCBI chr 2:160,573,230...160,617,680
Ensembl chr 2:160,573,220...160,617,680 		JBrowse link
G Plk1 polo like kinase 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:28284560 NCBI chr 7:121,758,658...121,769,107
Ensembl chr 7:121,758,662...121,769,096 		JBrowse link
G Plk4 polo like kinase 4 sexual_dimorphism IMP
ISO 		DNA:hypermethylation:promoter RGD PMID:21324136 PMID:21324136 RGD:27226690, RGD:27226690 NCBI chr 3:40,754,463...40,771,318
Ensembl chr 3:40,754,454...40,771,318 		JBrowse link
G Plod3 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 3 treatment ISO
IMP 		mRNA, protein:increased expression:liver (human) RGD PMID:29059470 PMID:29059470 RGD:155791679, RGD:155791679 NCBI chr 5:137,015,873...137,025,500
Ensembl chr 5:137,015,873...137,025,502 		JBrowse link
G Plvap plasmalemma vesicle associated protein ISO CTD Direct Evidence: marker/mechanism CTD PMID:28284560 NCBI chr 8:71,950,397...71,964,446
Ensembl chr 8:71,950,409...71,964,396 		JBrowse link
G Plxdc1 plexin domain containing 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:28284560 NCBI chr11:97,814,063...97,879,393
Ensembl chr11:97,814,064...97,877,270 		JBrowse link
G Pml promyelocytic leukemia disease_progression
ameliorates
exacerbates 		ISO
IEP
IMP 		protein:increased expression:liver (human)
mRNA:increased expression:liver (mouse)
associated with hepatitis C 		RGD PMID:11511788 PMID:26118777 PMID:31144474 RGD:41404685, RGD:41404690, RGD:41404687 NCBI chr 9:58,125,359...58,157,077
Ensembl chr 9:58,125,359...58,157,069 		JBrowse link
G Pms2 PMS1 homolog2, mismatch repair system component ISO ClinVar Annotator: match by term: Hepatocellular carcinoma ClinVar NCBI chr 5:143,846,379...143,922,538
Ensembl chr 5:143,846,782...143,870,786
Ensembl chr 5:143,846,782...143,870,786 		JBrowse link
G Pnpla3 patatin-like phospholipase domain containing 3 ISO associated with Hepatitis C, Chronic;DNA:SNP: :rs738409 (p.I148M) (human) RGD PMID:21319195 RGD:14981585 NCBI chr15:84,052,017...84,073,720
Ensembl chr15:84,052,038...84,071,437 		JBrowse link
G Pnpt1 polyribonucleotide nucleotidyltransferase 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:21472284 NCBI chr11:29,080,236...29,112,010
Ensembl chr11:29,080,744...29,111,828 		JBrowse link
G Polg polymerase (DNA directed), gamma susceptibility IAGP DNA:SNPs:introns: (rs1061316, rs758130) (human) RGD PMID:28457473 RGD:15039387 NCBI chr 7:79,095,979...79,117,659
Ensembl chr 7:79,095,979...79,116,110 		JBrowse link
G Pon1 paraoxonase 1 disease_progression ISO mRNA:decreased expression:liver (human) RGD PMID:35693827 RGD:153344586 NCBI chr 6:5,168,101...5,193,824
Ensembl chr 6:5,168,090...5,193,946 		JBrowse link
G Pot1a protection of telomeres 1A disease_progression ISO associated with hepatitis B;DNA:SNP: :rs7784168(human) RGD PMID:23907815 RGD:152975963 NCBI chr 6:25,743,939...25,809,280
Ensembl chr 6:25,743,736...25,809,245 		JBrowse link
G Ppara peroxisome proliferator activated receptor alpha susceptibility IAGP associated with hepatitis B;DNA:missense mutation:cds:p.L162V (human) RGD PMID:19119483 RGD:15042881 NCBI chr15:85,619,112...85,691,052
Ensembl chr15:85,619,184...85,687,020 		JBrowse link
G Pparg peroxisome proliferator activated receptor gamma severity ISO CTD Direct Evidence: therapeutic
protein:decreased expression:liver 		CTD
RGD		 PMID:16374840 PMID:27451128 RGD:14694822 NCBI chr 6:115,337,828...115,467,365
Ensembl chr 6:115,337,912...115,467,360 		JBrowse link
G Ppat phosphoribosyl pyrophosphate amidotransferase ISO protein:increased activity:hepatoma (rat) RGD PMID:6327016 RGD:5135035 NCBI chr 5:77,061,096...77,099,425
Ensembl chr 5:77,061,096...77,099,425 		JBrowse link
G Ppp1r1a protein phosphatase 1, regulatory inhibitor subunit 1A ISO CTD Direct Evidence: marker/mechanism CTD PMID:15010824 NCBI chr15:103,438,706...103,446,465
Ensembl chr15:103,438,706...103,446,430 		JBrowse link
G Ppp1r9a protein phosphatase 1, regulatory subunit 9A onset ISO protein:increased expression:liver (rat) RGD PMID:20935162 RGD:10002734 NCBI chr 6:4,902,702...5,165,661
Ensembl chr 6:4,902,917...5,165,661 		JBrowse link
G Ppp1r9b protein phosphatase 1, regulatory subunit 9B severity ISO mRNA, protein:decreased expression:liver (human) RGD PMID:23591196 RGD:10043803 NCBI chr11:94,882,038...94,897,724
Ensembl chr11:94,881,861...94,897,725 		JBrowse link
G Ppp4r3c1 protein phosphatase 4 regulatory subunit 3C1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:28284560 NCBI chr  X:88,973,703...88,976,458
Ensembl chr  X:88,973,704...88,976,458 		JBrowse link
G Prc1 protein regulator of cytokinesis 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:28284560 NCBI chr 7:79,944,224...79,966,007
Ensembl chr 7:79,944,198...79,966,007 		JBrowse link
G Prdm1 PR domain containing 1, with ZNF domain disease_progression ISO associated with hepatitis B;
associated with hepatitis B;DNA:SNP: :rs1010273(human) 		RGD PMID:31100710 PMID:31376415 RGD:150530465, RGD:150530466 NCBI chr10:44,313,170...44,404,579
Ensembl chr10:44,313,173...44,404,497 		JBrowse link
G Prdx1 peroxiredoxin 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:27517622 NCBI chr 4:116,542,796...116,557,196
Ensembl chr 4:116,542,741...116,558,019 		JBrowse link
G Prdx2 peroxiredoxin 2 ISO CTD Direct Evidence: marker/mechanism CTD PMID:21472284 NCBI chr 8:85,696,251...85,701,440
Ensembl chr 8:85,696,216...85,701,463 		JBrowse link
G Prdx6 peroxiredoxin 6 ISO CTD Direct Evidence: marker/mechanism CTD PMID:21472284 NCBI chr 1:161,067,682...161,078,780
Ensembl chr 1:161,067,682...161,078,789 		JBrowse link
G Prex2 phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 2 exacerbates ISO mRNA:increased expression:liver (human)
mRNA:decreased expression:liver (human)
protein:increased expression:liver (human) 		RGD PMID:25151370 PMID:31776854 PMID:28000796 PMID:28205209 RGD:151665185, RGD:151665343, RGD:151665188, RGD:151665186 NCBI chr 1:11,063,496...11,373,907
Ensembl chr 1:11,063,689...11,373,905 		JBrowse link
G Prkn parkin RBR E3 ubiquitin protein ligase severity IEP protein:decreased expression:liver (human) RGD PMID:28862485 RGD:13432206 NCBI chr17:11,059,227...12,282,257
Ensembl chr17:11,059,271...12,282,248 		JBrowse link
G Prl prolactin onset ISO protein:increased expression:serum (human) RGD PMID:22392353 RGD:125097525 NCBI chr13:27,241,553...27,249,187
Ensembl chr13:27,241,553...27,249,188 		JBrowse link
G Prom1 prominin 1 IEP mRNA:increased expression:liver (mouse) RGD PMID:26569409 RGD:11344640 NCBI chr 5:44,150,963...44,260,850
Ensembl chr 5:44,150,962...44,259,374 		JBrowse link
G Ptch1 patched 1 severity
disease_progression 		ISO RGD PMID:18538319 PMID:22911366 RGD:150523837, RGD:150523842 NCBI chr13:63,656,142...63,721,274
Ensembl chr13:63,656,142...63,721,412 		JBrowse link
G Pten phosphatase and tensin homolog severity
treatment
exacerbates 		ISO
IMP
IAGP 		CTD Direct Evidence: marker/mechanism
protein:decreased expression:liver (human)
associated with hepatitis C, liver cirrhosis;protein:decreased expression:liver (human)
associated with hepatitis B;protein:decreased expression:liver (human)
OMIM:114550 		CTD
MouseDO
RGD		 PMID:27022031 PMID:29303510 PMID:29303510 PMID:31801250 PMID:12115563 More... RGD:152995524, RGD:152995524, RGD:151893509, RGD:127285610, RGD:127285603, RGD:127285591 NCBI chr19:32,734,977...32,803,560
Ensembl chr19:32,734,897...32,803,560 		JBrowse link
G Ptgs2 prostaglandin-endoperoxide synthase 2 treatment
severity
susceptibility 		ISO protein:increased expression:liver, cytosol
mRNA,protein:decreased expression:liver
DNA:SNP:promoter:-1195A>G (rs689466) (human)
CTD Direct Evidence: marker/mechanism 		CTD
RGD		 PMID:11872629 PMID:12024111 PMID:14563831 PMID:16374840 PMID:17510421 More... RGD:2300283, RGD:152177911, RGD:14695012, RGD:14695011, RGD:14695010 NCBI chr 1:149,975,851...149,983,978
Ensembl chr 1:149,975,782...149,983,978 		JBrowse link
G Pth1r parathyroid hormone 1 receptor ISO CTD Direct Evidence: marker/mechanism CTD PMID:28284560 NCBI chr 9:110,551,132...110,576,213
Ensembl chr 9:110,551,153...110,576,213 		JBrowse link
G Ptk2 PTK2 protein tyrosine kinase 2 ISO CTD Direct Evidence: marker/mechanism CTD
RGD		 PMID:14578863 PMID:17203219 RGD:2292584 NCBI chr15:73,076,951...73,297,192
Ensembl chr15:73,076,951...73,295,129 		JBrowse link
G Ptpn13 protein tyrosine phosphatase, non-receptor type 13 susceptibility
disease_progression 		ISO DNA:SNP: :p.Y2081D(human) RGD PMID:26801674 PMID:16489062 RGD:152176666, RGD:152599190 NCBI chr 5:103,573,058...103,746,227
Ensembl chr 5:103,573,058...103,746,169 		JBrowse link
G Ptprb protein tyrosine phosphatase receptor type B disease_progression ISO mRNA:decreased expression:liver (human) RGD PMID:30237408 RGD:151361293 NCBI chr10:116,111,407...116,225,443
Ensembl chr10:116,111,428...116,225,440 		JBrowse link
G Pttg1 pituitary tumor-transforming gene 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:28284560 NCBI chr11:43,311,097...43,317,417
Ensembl chr11:43,311,077...43,317,078 		JBrowse link
G Pvt1 Pvt1 oncogene ISO mRNA:increased expression:liver (human) RGD PMID:30205391 RGD:153344577 NCBI chr15:61,909,835...62,132,064
Ensembl chr15:61,888,639...62,249,945 		JBrowse link
G Pycard PYD and CARD domain containing ISO CTD Direct Evidence: marker/mechanism CTD PMID:17471463 NCBI chr 7:127,590,545...127,593,039
Ensembl chr 7:127,588,880...127,593,039 		JBrowse link
G Pygl liver glycogen phosphorylase ISO CTD Direct Evidence: marker/mechanism CTD PMID:2885971 NCBI chr12:70,237,589...70,274,457
Ensembl chr12:70,237,585...70,278,262 		JBrowse link
G Rac1 Rac family small GTPase 1 exacerbates ISO CTD Direct Evidence: marker/mechanism
protein:increased expression:liver (human)
mRNA:increased expression:liver (human) 		CTD
RGD		 PMID:18506888 PMID:20522449 PMID:33482578 RGD:153350129, RGD:153298967 NCBI chr 5:143,491,236...143,513,786
Ensembl chr 5:143,489,389...143,513,791 		JBrowse link
G Racgap1 Rac GTPase-activating protein 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:28284560 NCBI chr15:99,518,377...99,549,504
Ensembl chr15:99,518,377...99,549,537 		JBrowse link
G Rad21 RAD21 cohesin complex component treatment
susceptibility
exacerbates 		ISO human cells in a mouse model
associated with hepatitis c, liver cirrhosis;mRNA:increased expression:liver (human) 		RGD PMID:30698808 PMID:33251678 PMID:32596342 RGD:150520029, RGD:150520026, RGD:150520035 NCBI chr15:51,826,000...51,856,934
Ensembl chr15:51,825,636...51,855,143 		JBrowse link
G Rad50 RAD50 double strand break repair protein ISO ClinVar Annotator: match by term: Hepatocellular carcinoma ClinVar PMID:16385572 PMID:18281469 PMID:19409520 PMID:24894818 PMID:25452441 More... NCBI chr11:53,540,346...53,598,146
Ensembl chr11:53,540,346...53,598,146 		JBrowse link
G Rad52 RAD52 homolog, DNA repair protein susceptibility
onset 		ISO associated with hepatitis B;DNA:SNP:3'utr: (rs7963551) (human)
mRNA,protein:increased expression:liver (human) 		RGD PMID:24729511 PMID:31719794 RGD:151361199, RGD:151361207 NCBI chr 6:119,878,781...119,899,789
Ensembl chr 6:119,879,659...119,899,789 		JBrowse link
G Rad54l RAD54 like (S. cerevisiae) ISO CTD Direct Evidence: marker/mechanism CTD PMID:28284560 NCBI chr 4:115,951,458...115,980,875
Ensembl chr 4:115,951,461...115,980,887 		JBrowse link
G Rara retinoic acid receptor, alpha ISO CTD Direct Evidence: marker/mechanism CTD PMID:18026104 NCBI chr11:98,818,626...98,865,768
Ensembl chr11:98,818,644...98,865,768 		JBrowse link
G Rb1 RB transcriptional corepressor 1 treatment ISO CTD Direct Evidence: marker/mechanism CTD
RGD		 PMID:12029619 PMID:14961299 PMID:33841550 RGD:152998960 NCBI chr14:73,430,298...73,563,446
Ensembl chr14:73,421,113...73,563,262 		JBrowse link
G Rbm10 RNA binding motif protein 10 disease_progression ISO mRNA:decreased expression:liver RGD PMID:32572914 RGD:151356975 NCBI chr  X:20,483,596...20,517,128
Ensembl chr  X:20,483,742...20,517,140 		JBrowse link
G Rbmy RNA binding motif protein, Y chromosome EXP CTD Direct Evidence: marker/mechanism CTD PMID:22073224 NCBI chr  Y:2,830,680...2,841,858
Ensembl chr  Y:2,830,680...2,841,854 		JBrowse link
G Rcan1 regulator of calcineurin 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:28284560 NCBI chr16:92,188,839...92,263,057
Ensembl chr16:92,188,841...92,267,755 		JBrowse link
G Recql RecQ protein-like disease_progression ISO protein:increased expression:liver RGD PMID:18422747 PMID:18422747 RGD:2317370, RGD:2317370 NCBI chr 6:142,296,068...142,332,802
Ensembl chr 6:142,296,068...142,332,813 		JBrowse link
G Reg3b regenerating islet-derived 3 beta ISO mRNA:increased expression:liver (human) RGD PMID:10550309 RGD:9831380 NCBI chr 6:78,347,868...78,350,449
Ensembl chr 6:78,347,640...78,350,449 		JBrowse link
G Ret ret proto-oncogene severity ISO protein:increased expression:liver (human)
ClinVar Annotator: match by term: Hepatocellular carcinoma 		RGD
ClinVar		 PMID:7784092 PMID:7845675 PMID:7911697 PMID:8807338 PMID:8918855 More... RGD:150340602 NCBI chr 6:118,128,709...118,174,705
Ensembl chr 6:118,128,706...118,174,679 		JBrowse link
G Rgn regucalcin ISO protein:decreased expression:liver RGD PMID:21683810 RGD:5509919 NCBI chr  X:20,413,980...20,428,328
Ensembl chr  X:20,416,026...20,428,328 		JBrowse link
G Rictor RPTOR independent companion of MTOR, complex 2 severity ISO
IMP 		mRNA, protein:increased expression:liver (human) RGD PMID:25371154 PMID:29303510 RGD:152995471, RGD:152995524 NCBI chr15:6,737,827...6,829,882
Ensembl chr15:6,737,860...6,829,882 		JBrowse link
G Rit1 Ras-like without CAAX 1 ameliorates ISO human cells in mouse model RGD PMID:31247273 RGD:152999016 NCBI chr 3:88,624,154...88,638,354
Ensembl chr 3:88,624,145...88,638,356 		JBrowse link
G Rnd3 Rho family GTPase 3 ISO CTD Direct Evidence: marker/mechanism CTD PMID:28284560 NCBI chr 2:51,020,451...51,039,123
Ensembl chr 2:51,020,450...51,039,123 		JBrowse link
G Rnf157 ring finger protein 157 ISO CTD Direct Evidence: marker/mechanism CTD PMID:28284560 NCBI chr11:116,227,179...116,303,859
Ensembl chr11:116,227,179...116,303,858 		JBrowse link
G Rnf43 ring finger protein 43 exacerbates ISO human cells in a mouse model RGD PMID:23136185 RGD:151361219 NCBI chr11:87,553,913...87,626,365
Ensembl chr11:87,553,548...87,626,365 		JBrowse link
G Rnf6 ring finger protein (C3H2C3 type) 6 disease_progression ISO RGD PMID:30496760 RGD:151665757 NCBI chr 5:146,146,003...146,158,267
Ensembl chr 5:146,146,002...146,158,365 		JBrowse link
G Robo1 roundabout guidance receptor 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:28284560 NCBI chr16:71,824,406...72,844,379
Ensembl chr16:72,105,194...72,842,983 		JBrowse link
G Rps6 ribosomal protein S6 ISO CTD Direct Evidence: marker/mechanism CTD PMID:21147110 NCBI chr 4:86,772,336...86,775,604
Ensembl chr 4:86,772,897...86,775,649 		JBrowse link
G Rps6ka3 ribosomal protein S6 kinase polypeptide 3 ISO CTD Direct Evidence: marker/mechanism CTD PMID:22561517 NCBI chr  X:158,038,652...158,151,240
Ensembl chr  X:157,993,303...158,151,240 		JBrowse link
G Rrm1 ribonucleotide reductase M1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:18230555 NCBI chr 7:102,090,902...102,118,978
Ensembl chr 7:102,090,902...102,118,978 		JBrowse link
G Rrm2 ribonucleotide reductase M2 ISO CTD Direct Evidence: marker/mechanism CTD PMID:18230555 PMID:28284560 NCBI chr12:24,758,253...24,764,145
Ensembl chr12:24,758,240...24,764,145 		JBrowse link
G Rspo3 R-spondin 3 ISO CTD Direct Evidence: marker/mechanism CTD PMID:28284560 NCBI chr10:29,329,102...29,411,863
Ensembl chr10:29,328,412...29,411,863 		JBrowse link
G Rtkn rhotekin ISO mRNA:increased expression:liver RGD PMID:27922690 RGD:19165144 NCBI chr 6:83,112,485...83,129,560
Ensembl chr 6:83,112,444...83,129,560 		JBrowse link
G Rtp3 receptor transporter protein 3 ISO CTD Direct Evidence: marker/mechanism CTD PMID:17693185 NCBI chr 9:110,814,003...110,818,781
Ensembl chr 9:110,814,003...110,819,651 		JBrowse link
G Runx1 runt related transcription factor 1 ISO mRNA:decreased expression:liver RGD PMID:17094378 RGD:126775147 NCBI chr16:92,398,354...92,622,962
Ensembl chr16:92,398,354...92,623,037 		JBrowse link
G Runx3 runt related transcription factor 3 ISO CTD Direct Evidence: marker/mechanism
mRNA:decreased expression:liver 		CTD
RGD		 PMID:28458013 PMID:17094378 RGD:126775147 NCBI chr 4:134,847,956...134,905,301
Ensembl chr 4:134,847,963...134,905,301 		JBrowse link
G Ryr3 ryanodine receptor 3 disease_progression ISO DNA:SNP:3'UTR:rs1044129(human) RGD PMID:26309413 RGD:155882454 NCBI chr 2:112,461,699...113,047,755
Ensembl chr 2:112,461,700...113,047,441 		JBrowse link
G S100a9 S100 calcium binding protein A9 (calgranulin B) disease_progression ISO mRNA:increased expression:liver (human) RGD PMID:35693827 RGD:153344586 NCBI chr 3:90,599,937...90,603,028
Ensembl chr 3:90,599,939...90,603,028 		JBrowse link
G Sardh sarcosine dehydrogenase severity ISO mRNA:altered expression:liver tumor (human) RGD PMID:30901224 RGD:152995286 NCBI chr 2:27,078,405...27,138,344
Ensembl chr 2:27,078,405...27,138,349 		JBrowse link
G Sav1 salvador family WW domain containing 1 IAGP OMIM:114550 MouseDO NCBI chr12:70,011,786...70,033,864
Ensembl chr12:70,011,786...70,033,776 		JBrowse link
G Scap SREBF chaperone ISO CTD Direct Evidence: marker/mechanism CTD PMID:14563831 NCBI chr 9:110,162,356...110,214,017
Ensembl chr 9:110,162,356...110,214,018 		JBrowse link
G Scd2 stearoyl-Coenzyme A desaturase 2 ISO CTD Direct Evidence: marker/mechanism CTD PMID:21147110 NCBI chr19:44,282,115...44,295,303
Ensembl chr19:44,282,113...44,295,303 		JBrowse link
G Serpina4-ps1 serine (or cysteine) peptidase inhibitor, clade A, member 4, pseudogene 1 ISO CTD Direct Evidence: therapeutic CTD PMID:19709125 NCBI chr12:104,044,218...104,053,179
Ensembl chr12:104,046,908...104,052,983 		JBrowse link
G Serpinb5 serine (or cysteine) peptidase inhibitor, clade B, member 5 disease_progression ISO associated with hepatitis B; RGD PMID:26296971 RGD:11520929 NCBI chr 1:106,788,905...106,811,078
Ensembl chr 1:106,788,903...106,811,078 		JBrowse link
G Serpinf1 serine (or cysteine) peptidase inhibitor, clade F, member 1 ISO associated with Human Viral Hepatitis, liver cirrhosis;protein:increased expression:serum (human) RGD PMID:27748324 RGD:27226704 NCBI chr11:75,300,855...75,313,449
Ensembl chr11:75,300,595...75,313,527 		JBrowse link
G Set SET nuclear oncogene ISO ClinVar Annotator: match by term: Hepatocellular carcinoma ClinVar PMID:26822237 NCBI chr 2:29,952,074...29,962,589
Ensembl chr 2:29,947,390...29,962,589 		JBrowse link
G Sf3b1 splicing factor 3b, subunit 1 treatment
disease_progression 		IEP
ISO 		protein:increased expression:liver
mRNA, protein:increased expression:liver 		RGD PMID:29954402 PMID:33038489 PMID:33038489 PMID:29954402 RGD:126790493, RGD:126790494, RGD:126790494, RGD:126790493 NCBI chr 1:55,024,328...55,066,660
Ensembl chr 1:55,024,328...55,066,640 		JBrowse link
G Sf3b4 splicing factor 3b, subunit 4 severity
treatment 		ISO
IMP 		mRNA, protein:increased expression:liver (rat)
mRNA, protein:increased expression:liver(human)
human cells in mouse model
mRNA, protein:increased expression:liver (human) 		RGD PMID:29059470 PMID:30391496 PMID:30391496 PMID:29059470 PMID:29059470 RGD:155791679, RGD:155804298, RGD:155804298, RGD:155791679, RGD:155791679 NCBI chr 3:96,079,822...96,084,880
Ensembl chr 3:96,079,648...96,084,880 		JBrowse link
G Sfn stratifin ISO CTD Direct Evidence: marker/mechanism CTD PMID:21472284 NCBI chr 4:133,327,867...133,329,163
Ensembl chr 4:133,327,867...133,329,479 		JBrowse link
G Sfrp1 secreted frizzled-related protein 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:28284560 NCBI chr 8:23,901,401...23,939,648
Ensembl chr 8:23,901,518...23,939,648 		JBrowse link
G Sh3gl1 SH3-domain GRB2-like 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:33838155 NCBI chr17:56,323,750...56,343,659
Ensembl chr17:56,323,750...56,343,635 		JBrowse link
G Shc1 src homology 2 domain-containing transforming protein C1 ISO protein:increased expression, increased phosphorylation:hepatocyte RGD PMID:15375560 RGD:1643188 NCBI chr 3:89,325,858...89,337,336
Ensembl chr 3:89,325,750...89,337,334 		JBrowse link
G Shh sonic hedgehog ISO CTD Direct Evidence: marker/mechanism CTD PMID:26189965 NCBI chr 5:28,661,838...28,672,099
Ensembl chr 5:28,661,813...28,672,254 		JBrowse link
G Sik2 salt inducible kinase 2 ISO CTD Direct Evidence: marker/mechanism CTD PMID:34491613 NCBI chr 9:50,800,944...50,920,432
Ensembl chr 9:50,804,101...50,920,373 		JBrowse link
G Six1 sine oculis-related homeobox 1 severity ISO protein:increased expression:liver (human) RGD PMID:17008870 RGD:11561961 NCBI chr12:73,088,601...73,093,486
Ensembl chr12:73,086,789...73,100,661 		JBrowse link
G Ska1 spindle and kinetochore associated complex subunit 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:28284560 NCBI chr18:74,328,370...74,340,889
Ensembl chr18:74,328,370...74,340,889 		JBrowse link
G Ska3 spindle and kinetochore associated complex subunit 3 ISO CTD Direct Evidence: marker/mechanism CTD PMID:28284560 NCBI chr14:58,044,016...58,063,748
Ensembl chr14:58,044,018...58,063,642 		JBrowse link
G Skp2 S-phase kinase-associated protein 2 ISO protein:increased expression:liver
CTD Direct Evidence: marker/mechanism 		CTD
RGD		 PMID:12717389 PMID:19533683 RGD:2315050 NCBI chr15:9,112,070...9,155,512
Ensembl chr15:9,112,073...9,155,512 		JBrowse link
G Slc22a1 solute carrier family 22 (organic cation transporter), member 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:28284560 NCBI chr17:12,867,761...12,894,725
Ensembl chr17:12,867,756...12,894,716 		JBrowse link
G Slc25a47 solute carrier family 25, member 47 ISO CTD Direct Evidence: marker/mechanism CTD PMID:28284560 NCBI chr12:108,815,740...108,822,741
Ensembl chr12:108,801,972...108,822,741 		JBrowse link
G Slc26a6 solute carrier family 26, member 6 ISO CTD Direct Evidence: marker/mechanism CTD PMID:28284560 NCBI chr 9:108,731,239...108,742,117
Ensembl chr 9:108,730,482...108,742,117 		JBrowse link
G Slc2a1 solute carrier family 2 (facilitated glucose transporter), member 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:8364915 NCBI chr 4:118,966,001...118,994,527
Ensembl chr 4:118,965,908...118,995,180 		JBrowse link
G Slc2a2 solute carrier family 2 (facilitated glucose transporter), member 2 ISO CTD Direct Evidence: marker/mechanism CTD PMID:8364915 NCBI chr 3:28,752,052...28,782,510
Ensembl chr 3:28,752,052...28,785,508 		JBrowse link
G Slc38a1 solute carrier family 38, member 1 ameliorates
disease_progression 		ISO RGD PMID:26389641 PMID:26389641 RGD:151361140, RGD:151361140 NCBI chr15:96,469,299...96,541,396
Ensembl chr15:96,469,299...96,540,794 		JBrowse link
G Slc5a5 solute carrier family 5 (sodium iodide symporter), member 5 ISO CTD Direct Evidence: therapeutic CTD PMID:15347726 PMID:15520214 NCBI chr 8:71,335,529...71,345,429
Ensembl chr 8:71,335,533...71,345,401 		JBrowse link
G Slc7a5 solute carrier family 7 (cationic amino acid transporter, y+ system), member 5 ameliorates
disease_progression 		ISO mRNA:increased expression:liver RGD PMID:26389641 PMID:7532544 PMID:23696029 PMID:26389641 RGD:151361140, RGD:634202, RGD:151361280, RGD:151361140 NCBI chr 8:122,607,885...122,634,425
Ensembl chr 8:122,607,889...122,634,433 		JBrowse link
G Slco1b2 solute carrier organic anion transporter family, member 1b2 disease_progression
exacerbates 		ISO protein:decreased expression:liver (human)
mRNA,protein:decreased expression:liver (human) 		RGD PMID:21626360 PMID:32534581 RGD:152995417, RGD:152995423 NCBI chr 6:141,575,178...141,632,372
Ensembl chr 6:141,575,244...141,632,372 		JBrowse link
G Slit2 slit guidance ligand 2 ISO CTD Direct Evidence: marker/mechanism CTD PMID:19100240 NCBI chr 5:48,138,633...48,465,077
Ensembl chr 5:48,140,480...48,465,075 		JBrowse link
G Smad2 SMAD family member 2 ISO RGD PMID:18971187 RGD:12880056 NCBI chr18:76,369,898...76,444,819
Ensembl chr18:76,374,651...76,444,034 		JBrowse link
G Smad4 SMAD family member 4 disease_progression ISO protein:increased expression:liver:
protein:decreased expression:liver 		RGD PMID:18971187 PMID:29924446 PMID:22799322 PMID:23922662 RGD:12880056, RGD:21066342, RGD:21066341, RGD:18182921 NCBI chr18:73,767,861...73,836,862
Ensembl chr18:73,772,080...73,836,851 		JBrowse link
G Smad7 SMAD family member 7 ISO mRNA:increased expression:liver (human) RGD PMID:25602745 RGD:14401589 NCBI chr18:75,500,436...75,529,006
Ensembl chr18:75,500,600...75,529,006 		JBrowse link
G Smarca4 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 ISO DNA:SNPs: :rs11879293, rs2072382 (human) RGD PMID:24556940 RGD:127285650 NCBI chr 9:21,527,377...21,615,526
Ensembl chr 9:21,527,465...21,615,526 		JBrowse link
G Smarcb1 SWI/SNF related BAF chromatin remodeling complex subunit B1 disease_progression ISO mRNA:decreased expression:liver RGD PMID:27111394 RGD:127285647 NCBI chr10:75,732,603...75,757,448
Ensembl chr10:75,732,603...75,757,451 		JBrowse link
G Smarcc1 SWI/SNF related BAF chromatin remodeling complex subunit C1 ameliorates ISO mRNA, protein:increased expression:liver (human) RGD PMID:32514535 RGD:151347860 NCBI chr 9:109,961,129...110,069,773
Ensembl chr 9:109,946,776...110,069,246 		JBrowse link
G Smc3 structural maintenance of chromosomes 3 exacerbates ISO mRNA:increased editing:cds:p.K96R,p.Q103R(human) RGD PMID:29996118 RGD:156430111 NCBI chr19:53,588,827...53,634,262
Ensembl chr19:53,588,829...53,634,264 		JBrowse link
G Smg9 SMG9 nonsense mediated mRNA decay factor severity ISO RGD PMID:34456727 RGD:155882446 NCBI chr 7:24,099,106...24,122,197
Ensembl chr 7:24,099,044...24,122,203 		JBrowse link
G Smo smoothened, frizzled class receptor disease_progression ISO DNA:SNP: :rs3824 (human) RGD PMID:25944162 RGD:150340548 NCBI chr 6:29,735,480...29,761,359
Ensembl chr 6:29,735,502...29,761,364 		JBrowse link
G Snai1 snail family zinc finger 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:35841383 NCBI chr 2:167,380,115...167,384,734
Ensembl chr 2:167,380,115...167,384,734 		JBrowse link
G Snrpe small nuclear ribonucleoprotein E ISO human gene in a mouse model RGD PMID:21688285 RGD:10768833 NCBI chr 1:133,531,609...133,538,018
Ensembl chr 1:133,531,609...133,538,029 		JBrowse link
G Snw1 SNW domain containing 1 severity ISO protein:increased expression:liver (human) RGD PMID:23696020 RGD:11035253 NCBI chr12:87,496,680...87,519,069
Ensembl chr12:87,495,845...87,519,044 		JBrowse link
G Snx27 sorting nexin family member 27 ISO CTD Direct Evidence: marker/mechanism CTD PMID:36029209 NCBI chr 3:94,404,849...94,490,023
Ensembl chr 3:94,404,851...94,490,023 		JBrowse link
G Soat1 sterol O-acyltransferase 1 exacerbates ISO associated with hepatitis B;protein:increased expression:liver (human) RGD PMID:30814741 RGD:126925204 NCBI chr 1:156,255,678...156,301,898
Ensembl chr 1:156,252,095...156,301,901 		JBrowse link
G Soat2 sterol O-acyltransferase 2 ISO RGD PMID:16274362 RGD:1581190 NCBI chr15:102,058,853...102,071,871
Ensembl chr15:102,058,961...102,071,904 		JBrowse link
G Socs1 suppressor of cytokine signaling 1 treatment ISO associated with liver cirrhosis;DNA:altered methylation:liver:
DNA:hypermethylation:CpG island, 5'untranslated region: 		RGD PMID:14614012 PMID:22318090 PMID:15235874 PMID:18843197 RGD:150573687, RGD:150573703, RGD:150573700, RGD:150573689 NCBI chr16:10,601,672...10,603,400
Ensembl chr16:10,600,104...10,603,400 		JBrowse link
G Socs2 suppressor of cytokine signaling 2 ISO CTD Direct Evidence: marker/mechanism CTD PMID:28284560 NCBI chr10:95,219,765...95,253,176
Ensembl chr10:95,221,224...95,253,042 		JBrowse link
G Socs3 suppressor of cytokine signaling 3 ISO CTD Direct Evidence: marker/mechanism CTD PMID:16831601 NCBI chr11:117,856,905...117,860,192
Ensembl chr11:117,856,905...117,860,873 		JBrowse link
G Sod1 superoxide dismutase 1, soluble ISO CTD Direct Evidence: marker/mechanism CTD PMID:33010264 NCBI chr16:90,017,650...90,023,221
Ensembl chr16:90,017,642...90,023,217 		JBrowse link
G Sod2 superoxide dismutase 2, mitochondrial disease_progression
susceptibility 		ISO CTD Direct Evidence: marker/mechanism
protein:increased expression:saliva
associated with liver cirrhosis; DNA:SNP:cds:p.Ala16Val(rs1799725)(human) 		CTD
RGD		 PMID:16767786 PMID:18760346 PMID:19731237 PMID:21472284 PMID:33010264 More... RGD:1581242, RGD:27095881, RGD:26923955, RGD:26923907 NCBI chr17:13,226,726...13,237,006
Ensembl chr17:13,225,733...13,258,950 		JBrowse link
G Sox30 SRY (sex determining region Y)-box 30 disease_progression
exacerbates 		ISO RGD PMID:30312695 PMID:30312695 RGD:151660341, RGD:151660341 NCBI chr11:45,869,873...45,908,824
Ensembl chr11:45,871,137...45,908,821 		JBrowse link
G Spag9 sperm associated antigen 9 ISO associated with Human Viral Hepatitis RGD PMID:29344208 RGD:30296654 NCBI chr11:93,886,794...94,016,919
Ensembl chr11:93,886,917...94,016,911 		JBrowse link
G Spc25 SPC25, NDC80 kinetochore complex component, homolog (S. cerevisiae) ISO CTD Direct Evidence: marker/mechanism CTD PMID:28284560 NCBI chr 2:69,009,753...69,036,583
Ensembl chr 2:69,024,239...69,036,538 		JBrowse link
G Spock1 sparc/osteonectin, cwcv and kazal-like domains proteoglycan 1 ameliorates ISO human cells in mouse model RGD PMID:30710422 RGD:153344549 NCBI chr13:57,569,008...58,056,194
Ensembl chr13:57,569,008...58,056,146 		JBrowse link
G Spop speckle-type BTB/POZ protein exacerbates ISO mRNA:decreased expression:liver (human)
human cells in mouse model 		RGD PMID:26156804 PMID:33209975 RGD:11074965, RGD:153298924 NCBI chr11:95,304,909...95,384,236
Ensembl chr11:95,304,906...95,384,232 		JBrowse link
G Spp1 secreted phosphoprotein 1 disease_progression ISO mRNA:increased expression:liver (human) RGD PMID:16047475 PMID:35693827 RGD:1581375, RGD:153344586 NCBI chr 5:104,582,977...104,588,919
Ensembl chr 5:104,582,984...104,588,916 		JBrowse link
G Sprtn SprT-like N-terminal domain ISO CTD Direct Evidence: marker/mechanism CTD PMID:25261934 NCBI chr 8:125,624,612...125,632,903
Ensembl chr 8:125,624,625...125,632,900 		JBrowse link
G Src Rous sarcoma oncogene disease_progression ISO RGD PMID:9581679 PMID:9581679 RGD:150521543, RGD:150521543 NCBI chr 2:157,265,828...157,313,758
Ensembl chr 2:157,260,364...157,313,782 		JBrowse link
G Srebf1 sterol regulatory element binding transcription factor 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:14563831 PMID:21147110 NCBI chr11:60,089,910...60,113,407
Ensembl chr11:60,089,915...60,113,407 		JBrowse link
G Srebf2 sterol regulatory element binding factor 2 ISO CTD Direct Evidence: marker/mechanism CTD PMID:21147110 NCBI chr15:82,031,455...82,089,580
Ensembl chr15:82,031,382...82,089,580 		JBrowse link
G Srf serum response factor ISO RGD PMID:9570363 RGD:1581428 NCBI chr17:46,857,764...46,869,194
Ensembl chr17:46,859,255...46,867,101 		JBrowse link
G Srpx sushi-repeat-containing protein ISO CTD Direct Evidence: marker/mechanism CTD PMID:28284560 NCBI chr  X:9,904,216...9,983,879
Ensembl chr  X:9,904,216...9,983,948 		JBrowse link
G Srsf1 serine and arginine-rich splicing factor 1 ISO mRNA:increased expression:liver (human) RGD PMID:23633480 RGD:9685423 NCBI chr11:87,937,325...87,944,583
Ensembl chr11:87,938,199...87,944,581 		JBrowse link
G Srsf2 serine and arginine-rich splicing factor 2 disease_progression
treatment 		IMP
ISO 		RGD PMID:32372053 PMID:29278882 PMID:28082404 RGD:150429663, RGD:150429692, RGD:150429666 NCBI chr11:116,740,723...116,744,511
Ensembl chr11:116,740,727...116,743,920 		JBrowse link
G Ssxb5 SSX member B5 ISO CTD Direct Evidence: marker/mechanism CTD PMID:28284560 NCBI chr  X:8,669,930...8,676,348
Ensembl chr  X:8,669,930...8,675,625 		JBrowse link
G St6gal1 beta galactoside alpha 2,6 sialyltransferase 1 IEP protein:increased activity:liver: RGD PMID:9331085 RGD:10043141 NCBI chr16:23,043,478...23,179,100
Ensembl chr16:23,043,490...23,179,100 		JBrowse link
G Stab2 stabilin 2 ISO CTD Direct Evidence: marker/mechanism CTD PMID:28284560 NCBI chr10:86,677,058...86,843,902
Ensembl chr10:86,677,062...86,843,889 		JBrowse link
G Stat1 signal transducer and activator of transcription 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:22488367 NCBI chr 1:52,158,588...52,201,024
Ensembl chr 1:52,158,599...52,201,024 		JBrowse link
G Stat3 signal transducer and activator of transcription 3 IEP protein:increased phosphorylation:liver (mouse) RGD PMID:28100771 RGD:127285675 NCBI chr11:100,777,632...100,830,447
Ensembl chr11:100,775,924...100,830,366 		JBrowse link
G Stat4 signal transducer and activator of transcription 4 susceptibility ISO CTD Direct Evidence: marker/mechanism
Hepatitis B, Chronic; DNA:SNP: intron 3: (rs7574865) (human) 		CTD
RGD		 PMID:23242368 PMID:26745093 RGD:11553302 NCBI chr 1:52,026,265...52,146,348
Ensembl chr 1:52,026,307...52,146,348 		JBrowse link
G Stat5a signal transducer and activator of transcription 5A ameliorates IEP RGD PMID:28100771 RGD:127285675 NCBI chr11:100,750,177...100,775,995
Ensembl chr11:100,750,177...100,775,995 		JBrowse link
G Stat5b signal transducer and activator of transcription 5B exacerbates
ameliorates 		ISO protein:increased expression:liver (human)
mRNA:increased expression:liver (human) 		RGD PMID:17047057 PMID:31485610 RGD:153298929, RGD:153298932 NCBI chr11:100,671,557...100,741,407
Ensembl chr11:100,671,557...100,741,550 		JBrowse link
G Stc2 stanniocalcin 2 disease_progression ISO mRNA:increased expression:liver (human) RGD PMID:35693827 RGD:153344586 NCBI chr11:31,309,441...31,320,061
Ensembl chr11:31,307,307...31,320,074 		JBrowse link
G Stim1 stromal interaction molecule 1 ISO mRNA:increased expression:liver (human) RGD PMID:23211538 RGD:152995401 NCBI chr 7:101,909,279...102,086,525
Ensembl chr 7:101,917,013...102,086,526 		JBrowse link
G Stmn1 stathmin 1 disease_progression ISO CTD Direct Evidence: marker/mechanism CTD
RGD		 PMID:28284560 PMID:28982915 RGD:21408578 NCBI chr 4:134,195,631...134,201,154
Ensembl chr 4:134,195,631...134,201,154 		JBrowse link
G Tacc3 transforming, acidic coiled-coil containing protein 3 ISO CTD Direct Evidence: marker/mechanism CTD PMID:28284560 NCBI chr 5:33,814,808...33,836,331
Ensembl chr 5:33,815,472...33,836,339 		JBrowse link
G Tagln2 transgelin 2 ISO CTD Direct Evidence: marker/mechanism CTD PMID:21472284 NCBI chr 1:172,327,813...172,334,942
Ensembl chr 1:172,327,614...172,334,947 		JBrowse link
G Taldo1 transaldolase 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:19436114 NCBI chr 7:140,972,073...140,982,889
Ensembl chr 7:140,972,112...140,982,881 		JBrowse link
G Tatdn1 TatD DNase domain containing 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:21472284 NCBI chr15:58,762,002...58,805,605
Ensembl chr15:58,762,004...58,805,587 		JBrowse link
G Tbx3 T-box 3 ameliorates
disease_progression
severity 		IMP
ISO 		human cells in mouse model
protein:increased expression:liver (human) 		RGD PMID:33577921 PMID:22811581 PMID:26922018 PMID:30578408 PMID:29295731 RGD:151361112, RGD:151361132, RGD:151361123, RGD:151361122, RGD:151361114 NCBI chr 5:119,808,600...119,822,789
Ensembl chr 5:119,808,734...119,822,789 		JBrowse link
G Tcf19 transcription factor 19 ISO CTD Direct Evidence: marker/mechanism CTD PMID:28284560 NCBI chr17:35,823,627...35,827,730
Ensembl chr17:35,823,631...35,827,721 		JBrowse link
G Tcim transcriptional and immune response regulator ISO CTD Direct Evidence: marker/mechanism CTD PMID:28284560 NCBI chr 8:24,927,188...24,928,962
Ensembl chr 8:24,927,196...24,929,000 		JBrowse link
G Tedc2 tubulin epsilon and delta complex 2 ISO CTD Direct Evidence: marker/mechanism CTD PMID:28284560 NCBI chr17:24,434,028...24,439,825
Ensembl chr17:24,434,028...24,439,825 		JBrowse link
G Tek TEK receptor tyrosine kinase ISO protein:increased expression RGD PMID:16951510 RGD:1601490 NCBI chr 4:94,627,322...94,763,213
Ensembl chr 4:94,627,526...94,763,213 		JBrowse link
G Tep1 telomerase associated protein 1 disease_progression
susceptibility 		ISO associated with hepatitis B;DNA:SNPs: :rs1713449,rs1760898, rs872072 (human)
DNA:SNP:intron:rs1760893(human) 		RGD PMID:23907815 PMID:27305982 RGD:152975963, RGD:152977750 NCBI chr14:51,061,513...51,108,036
Ensembl chr14:51,061,516...51,108,017 		JBrowse link
G Tert telomerase reverse transcriptase disease_progression
susceptibility
no_association
treatment 		ISO protein:increased expression, increased localization:nucleus
ClinVar Annotator: match by term: Hepatocellular carcinoma
associated with hepatitis B;DNA:SNP: :rs13167280 (human)
DNA:SNPs::rs2736098(human)
DNA:hypermethylation:promoter
DNA:SNP,mutations:promoter:rs2853669 (-245T >C), (-124C > T),(-146C > T)human
DNA:mutations, polymorphisms:promoter,intron, exon:rs2736100,rs2736098(human)
DNA:mutations:promoter:
CTD Direct Evidence: marker/mechanism 		ClinVar
CTD
RGD		 PMID:16651430 PMID:22634754 PMID:23000435 PMID:25362482 PMID:25741868 More... RGD:11038673, RGD:152975963, RGD:150530496, RGD:11530743, RGD:11564803, RGD:14696770, RGD:14696769, RGD:14696768, RGD:14696767 NCBI chr13:73,775,030...73,797,962
Ensembl chr13:73,775,030...73,797,962 		JBrowse link
G Tet1 tet methylcytosine dioxygenase 1 ISO protein:decreased expression:liver RGD PMID:23671639 RGD:9586747 NCBI chr10:62,640,349...62,723,242
Ensembl chr10:62,640,349...62,744,775 		JBrowse link
G Tet2 tet methylcytosine dioxygenase 2 severity
disease_progression
ameliorates 		ISO mRNA, protein:increased expression:liver (human)
mRNA:decreased expression:liver (human)
human cells in mouse model 		RGD PMID:26366235 PMID:29331390 PMID:30070373 PMID:33097695 PMID:29331390 RGD:150429684, RGD:150429595, RGD:150429689, RGD:150429597, RGD:150429595 NCBI chr 3:133,169,438...133,250,882
Ensembl chr 3:133,169,440...133,250,900 		JBrowse link
G Tfpi2 tissue factor pathway inhibitor 2 ISO CTD Direct Evidence: marker/mechanism CTD PMID:17464989 PMID:28284560 NCBI chr 6:3,962,589...3,988,977
Ensembl chr 6:3,962,595...3,988,919 		JBrowse link
G Tfrc transferrin receptor ISO mRNA:increased expression:liver RGD PMID:16953838 RGD:2292036 NCBI chr16:32,427,714...32,451,612
Ensembl chr16:32,427,738...32,451,612 		JBrowse link
G Tgfa transforming growth factor alpha ISO associated with Diabetes Mellitus, Experimental
CTD Direct Evidence: marker/mechanism 		CTD
RGD		 PMID:9029167 PMID:15565109 PMID:9060843 RGD:2317471 NCBI chr 6:86,172,020...86,252,726
Ensembl chr 6:86,172,205...86,252,701 		JBrowse link
G Tgfb1 transforming growth factor, beta 1 ISO
IEP 		CTD Direct Evidence: marker/mechanism
mRNA:increased expression:liver (mouse) 		CTD
RGD		 PMID:9029167 PMID:28100771 RGD:127285675 NCBI chr 7:25,386,406...25,404,503
Ensembl chr 7:25,386,427...25,404,502 		JBrowse link
G Tgfb2 transforming growth factor, beta 2 ISO CTD Direct Evidence: marker/mechanism CTD PMID:33010264 NCBI chr 1:186,354,984...186,441,504
Ensembl chr 1:186,354,989...186,438,186 		JBrowse link
G Tgfbr2 transforming growth factor, beta receptor II ISO mRNA, protein:decreased expression:liver RGD PMID:14585397 RGD:1601598 NCBI chr 9:115,916,763...116,004,431
Ensembl chr 9:115,913,361...116,004,428 		JBrowse link
G Tgm3 transglutaminase 3, E polypeptide ISO CTD Direct Evidence: marker/mechanism CTD PMID:28284560 NCBI chr 2:129,829,700...129,890,814
Ensembl chr 2:129,854,269...129,892,319 		JBrowse link
G Th tyrosine hydroxylase ISO CTD Direct Evidence: marker/mechanism CTD PMID:21472284 NCBI chr 7:142,446,516...142,453,732
Ensembl chr 7:142,446,489...142,484,865 		JBrowse link
G Them4 thioesterase superfamily member 4 ISO CTD Direct Evidence: therapeutic CTD PMID:23392203 NCBI chr 3:94,217,415...94,239,847
Ensembl chr 3:94,217,396...94,239,847 		JBrowse link
G Thy1 thymus cell antigen 1, theta ISO CTD Direct Evidence: marker/mechanism CTD PMID:28284560 NCBI chr 9:43,954,681...43,959,876
Ensembl chr 9:43,954,681...43,959,876 		JBrowse link
G Ticrr TOPBP1-interacting checkpoint and replication regulator ISO CTD Direct Evidence: marker/mechanism CTD PMID:28284560 NCBI chr 7:79,309,944...79,347,896
Ensembl chr 7:79,309,944...79,347,896 		JBrowse link
G Timd4 T cell immunoglobulin and mucin domain containing 4 ISO CTD Direct Evidence: marker/mechanism CTD PMID:28284560 NCBI chr11:46,701,613...46,735,160
Ensembl chr11:46,701,627...46,735,159 		JBrowse link
G Tk1 thymidine kinase 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:28284560 NCBI chr11:117,706,345...117,716,913
Ensembl chr11:117,706,352...117,716,918 		JBrowse link
G Tlr2 toll-like receptor 2 susceptibility ISO
IMP 		associated with Hepatitis C, Chronic;DNA:deletion:promoter:-196 to -174(human) RGD PMID:21500195 PMID:22859216 PMID:27183918 RGD:15090813, RGD:18337266, RGD:15090815 NCBI chr 3:83,743,579...83,749,045
Ensembl chr 3:83,743,579...83,749,074 		JBrowse link
G Tlr3 toll-like receptor 3 disease_progression ISO RGD PMID:23197495 RGD:21079421 NCBI chr 8:45,848,702...45,864,112
Ensembl chr 8:45,848,702...45,864,117 		JBrowse link
G Tlr4 toll-like receptor 4 susceptibility ISO CTD Direct Evidence: marker/mechanism
DNA:SNPs, haplotype: :multiples
DNA:SNP: :rs1057317(human)
protein:increased expression:liver: 		CTD
RGD		 PMID:27022031 PMID:21559380 PMID:25179842 PMID:28578348 RGD:14700558, RGD:14700557, RGD:14700552 NCBI chr 4:66,745,788...66,765,338
Ensembl chr 4:66,745,821...66,848,521 		JBrowse link
G Tlr7 toll-like receptor 7 ISO CTD Direct Evidence: marker/mechanism CTD PMID:24990399 NCBI chr  X:166,086,376...166,113,570
Ensembl chr  X:166,087,925...166,113,554 		JBrowse link
G Tlr9 toll-like receptor 9 treatment ISO protein: increased expression:peripheral blood mononuclear cell (human)
CTD Direct Evidence: marker/mechanism
human cells in a mouse model 		CTD
RGD		 PMID:24990399 PMID:18215354 PMID:24452201 RGD:18337472, RGD:18337468 NCBI chr 9:106,099,797...106,104,075
Ensembl chr 9:106,099,797...106,104,082 		JBrowse link
G Tmem70 transmembrane protein 70 ISO CTD Direct Evidence: marker/mechanism CTD PMID:27914986 NCBI chr 1:16,735,415...16,748,501
Ensembl chr 1:16,735,431...16,748,499 		JBrowse link
G Tnf tumor necrosis factor disease_progression ISO
IEP 		CTD Direct Evidence: marker/mechanism
mRNA, protein:increased expression:liver, blood serum (mouse) 		CTD
RGD		 PMID:27022031 PMID:26569409 PMID:26890368 RGD:11344640, RGD:14975171 NCBI chr17:35,418,343...35,420,983
Ensembl chr17:35,418,357...35,420,983 		JBrowse link
G Tnfaip3 tumor necrosis factor, alpha-induced protein 3 sexual_dimorphism
ameliorates 		IMP
ISO 		mRNA:decreased expression:liver (human)
mRNA,protein:increased expression:liver (human)
protein:decreased expression:liver (human) 		RGD PMID:27253414 PMID:29190981 PMID:26538215 PMID:32015333 RGD:151347600, RGD:151347622, RGD:151347618, RGD:151347604 NCBI chr10:18,876,658...18,891,158
Ensembl chr10:18,876,658...18,891,405 		JBrowse link
G Tnfsf10 tumor necrosis factor (ligand) superfamily, member 10 ISO CTD Direct Evidence: therapeutic CTD PMID:17326159 NCBI chr 3:27,371,226...27,393,814
Ensembl chr 3:27,371,177...27,396,576 		JBrowse link
G Tnfsf9 tumor necrosis factor (ligand) superfamily, member 9 IDA RGD PMID:17325342 RGD:2317348 NCBI chr17:57,412,113...57,414,757
Ensembl chr17:57,412,325...57,414,757 		JBrowse link
G Tnik TRAF2 and NCK interacting kinase disease_progression ISO protein:increased phosphorylation:liver, nucleus RGD PMID:25160513 PMID:25160513 RGD:151347837, RGD:151347837 NCBI chr 3:28,317,362...28,724,734
Ensembl chr 3:28,317,363...28,730,007 		JBrowse link
G Tonsl tonsoku-like, DNA repair protein ISO CTD Direct Evidence: marker/mechanism CTD PMID:28284560 NCBI chr15:76,510,437...76,524,129
Ensembl chr15:76,510,202...76,524,158 		JBrowse link
G Top2a topoisomerase (DNA) II alpha ISO CTD Direct Evidence: marker/mechanism CTD PMID:28284560 NCBI chr11:98,883,773...98,915,037
Ensembl chr11:98,883,769...98,915,015 		JBrowse link
G Tpx2 TPX2, microtubule-associated ISO CTD Direct Evidence: marker/mechanism CTD PMID:28284560 NCBI chr 2:152,689,859...152,737,241
Ensembl chr 2:152,689,884...152,737,241 		JBrowse link
G Traf7 TNF receptor-associated factor 7 treatment ISO mRNA:increased expression:liver RGD PMID:31730901 PMID:31730901 RGD:151356961, RGD:151356961 NCBI chr17:24,727,824...24,746,912
Ensembl chr17:24,727,536...24,746,912 		JBrowse link
G Traip TRAF-interacting protein ISO CTD Direct Evidence: marker/mechanism CTD PMID:28284560 NCBI chr 9:107,828,158...107,849,469
Ensembl chr 9:107,827,335...107,849,469 		JBrowse link
G Trim24 tripartite motif-containing 24 ISO CTD Direct Evidence: marker/mechanism CTD PMID:18026104 NCBI chr 6:37,846,816...37,945,380
Ensembl chr 6:37,847,746...37,943,231 		JBrowse link
G Trip13 thyroid hormone receptor interactor 13 ISO CTD Direct Evidence: marker/mechanism CTD PMID:28284560 NCBI chr13:74,060,577...74,085,855
Ensembl chr13:74,059,466...74,085,903 		JBrowse link
G Troap trophinin associated protein ISO CTD Direct Evidence: marker/mechanism CTD PMID:28284560 NCBI chr15:98,972,854...98,981,290
Ensembl chr15:98,972,456...98,981,290 		JBrowse link
G Trp53 transformation related protein 53 treatment IEP
ISO
EXP 		protein:altered localization:cytoplasm, nucleus
ClinVar Annotator: match by term: Hepatocellular cancer | ClinVar Annotator: match by term: Hepatocellular carcinoma
ClinVar Annotator: match by term: Hepatocellular cancer | ClinVar Annotator: match by term: Hepatocellular carcinoma | ClinVar Annotator: match by term: LIVER CELL CARCINOMA
mRNA:increased expression:liver (mouse)
DNA:missense mutation: :p.R249S (human)
CTD Direct Evidence: marker/mechanism
CTD Direct Evidence: marker/mechanism|therapeutic 		OMIM
ClinVar
CTD
RGD		 PMID:253702 PMID:960674 PMID:1349102 PMID:1349175 PMID:1359493 More... RGD:1302543, RGD:152998960, RGD:127285675, RGD:14995934, RGD:14995503 NCBI chr11:69,471,174...69,482,699
Ensembl chr11:69,471,185...69,482,699 		JBrowse link
G Trp73 transformation related protein 73 exacerbates
treatment 		ISO protein:decreased phosphorylation:liver (human)
human cells in a mouse model
mRNA:increased expression:liver (human) 		RGD PMID:27359056 PMID:25371988 PMID:19664633 PMID:14760085 PMID:31429776 RGD:151347579, RGD:151347596, RGD:151347594, RGD:151347593, RGD:151347592 NCBI chr 4:154,140,706...154,224,332
Ensembl chr 4:154,140,706...154,224,665 		JBrowse link
G Tsc1 TSC complex subunit 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:21499249 NCBI chr 2:28,531,005...28,581,183
Ensembl chr 2:28,531,240...28,581,179 		JBrowse link
G Tsc2 TSC complex subunit 2 severity IEP protein:decreased expression:liver (human) RGD PMID:24119083 RGD:21079731 NCBI chr17:24,814,788...24,851,607
Ensembl chr17:24,814,790...24,851,604 		JBrowse link
G Tslp thymic stromal lymphopoietin ISO CTD Direct Evidence: marker/mechanism CTD PMID:28284560 NCBI chr18:32,948,436...32,952,852
Ensembl chr18:32,948,436...32,952,850 		JBrowse link
G Tspy-ps testis specific protein-Y encoded, pseudogene ISO mRNA:increased expression:liver RGD PMID:16106251 RGD:2315447 NCBI chr  Y:1,055,764...1,058,868
Ensembl chr  Y:1,056,533...1,058,804 		JBrowse link
G Tst thiosulfate sulfurtransferase, mitochondrial ISO CTD Direct Evidence: marker/mechanism CTD PMID:21472284 NCBI chr15:78,283,756...78,290,065
Ensembl chr15:78,283,756...78,290,107 		JBrowse link
G Ttc36 tetratricopeptide repeat domain 36 ISO CTD Direct Evidence: marker/mechanism CTD PMID:28284560 NCBI chr 9:44,710,697...44,714,248
Ensembl chr 9:44,710,694...44,714,369 		JBrowse link
G Ttk Ttk protein kinase disease_progression ISO CTD Direct Evidence: marker/mechanism
mRNA:increased expression:liver (human) 		CTD
RGD		 PMID:28284560 PMID:35693827 RGD:153344586 NCBI chr 9:83,716,704...83,754,442
Ensembl chr 9:83,716,742...83,754,442 		JBrowse link
G Ttr transthyretin disease_progression ISO protein:decreased expression:blood serum (human)
protein:increased expression:blood serum (rat)
protein:increased expression:blood serum (human) 		RGD PMID:29534342 PMID:28876464 PMID:28876464 PMID:16240287 RGD:151356736, RGD:151664602, RGD:151664602, RGD:151665161 NCBI chr18:20,797,266...20,807,383
Ensembl chr18:20,798,337...20,807,378 		JBrowse link
G Txnip thioredoxin interacting protein IAGP OMIM:114550 MouseDO NCBI chr 3:96,465,273...96,469,173
Ensembl chr 3:96,465,273...96,469,199 		JBrowse link
G Tyms thymidylate synthase susceptibility ISO CTD Direct Evidence: marker/mechanism
DNA:deletion:3'UTR:1494del6(human) 		CTD
RGD		 PMID:18019677 PMID:18230555 PMID:17659576 RGD:14696708 NCBI chr 5:30,243,544...30,279,261
Ensembl chr 5:30,263,200...30,278,615 		JBrowse link
G Uaca uveal autoantigen with coiled-coil domains and ankyrin repeats IAGP OMIM:114550 MouseDO NCBI chr 9:60,700,488...60,787,713
Ensembl chr 9:60,701,824...60,787,652 		JBrowse link
G Ubd ubiquitin D ISO CTD Direct Evidence: marker/mechanism CTD PMID:19363144 NCBI chr17:37,504,783...37,506,992
Ensembl chr17:37,504,783...37,506,986 		JBrowse link
G Ube2c ubiquitin-conjugating enzyme E2C ISO CTD Direct Evidence: marker/mechanism CTD PMID:28284560 NCBI chr 2:164,611,849...164,614,822
Ensembl chr 2:164,611,818...164,620,742 		JBrowse link
G Ube2e2 ubiquitin-conjugating enzyme E2E 2 ISO CTD Direct Evidence: marker/mechanism CTD PMID:27914986 NCBI chr14:3,575,429...3,896,133
Ensembl chr14:3,575,429...3,896,121 		JBrowse link
G Ube2t ubiquitin-conjugating enzyme E2T ISO CTD Direct Evidence: marker/mechanism CTD PMID:28284560 NCBI chr 1:134,890,303...134,901,918
Ensembl chr 1:134,890,303...134,901,900 		JBrowse link
G Ubr5 ubiquitin protein ligase E3 component n-recognin 5 treatment IMP RGD PMID:32087767 RGD:151665344 NCBI chr15:37,966,421...38,084,103
Ensembl chr15:37,967,572...38,079,098 		JBrowse link
G Uchl1 ubiquitin carboxy-terminal hydrolase L1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:18666234 NCBI chr 5:66,833,464...66,844,577
Ensembl chr 5:66,833,434...66,844,577 		JBrowse link
G Uhrf1 ubiquitin-like, containing PHD and RING finger domains, 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:28284560 NCBI chr17:56,610,405...56,630,486
Ensembl chr17:56,610,321...56,630,486 		JBrowse link
G Umps uridine monophosphate synthetase ISO CTD Direct Evidence: marker/mechanism CTD PMID:18230555 NCBI chr16:33,775,152...33,787,408
Ensembl chr16:33,775,152...33,787,408 		JBrowse link
G Uroc1 urocanase domain containing 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:28284560 NCBI chr 6:90,310,221...90,341,533
Ensembl chr 6:90,310,266...90,341,533 		JBrowse link
G Usp2 ubiquitin specific peptidase 2 ISO CTD Direct Evidence: marker/mechanism CTD PMID:21147110 NCBI chr 9:43,978,318...44,006,924
Ensembl chr 9:43,978,318...44,006,924 		JBrowse link
G Usp4 ubiquitin specific peptidase 4 (proto-oncogene) ISO CTD Direct Evidence: marker/mechanism CTD PMID:35841383 NCBI chr 9:108,223,763...108,269,744
Ensembl chr 9:108,225,052...108,269,744 		JBrowse link
G Vasn vasorin ISO CTD Direct Evidence: marker/mechanism CTD PMID:25826090 NCBI chr16:4,457,809...4,469,030
Ensembl chr16:4,457,805...4,468,666 		JBrowse link
G Vav1 vav 1 oncogene ISO mRNA:decreased expression:liver RGD PMID:2064726 RGD:2306008 NCBI chr17:57,586,080...57,636,236
Ensembl chr17:57,586,100...57,635,031 		JBrowse link
G Vcam1 vascular cell adhesion molecule 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:22922871 NCBI chr 3:115,903,669...115,923,337
Ensembl chr 3:115,903,598...115,923,337 		JBrowse link
G Vdr vitamin D (1,25-dihydroxyvitamin D3) receptor susceptibility ISO DNA:hypermethylation:promoter
ClinVar Annotator: match by term: Hepatocellular cancer | ClinVar Annotator: match by term: Hepatocellular carcinoma
associated with alcoholic liver cirrhosis;DNA:haplotype::
associated with Hepatitis B, Chronic;DNA:SNP: :rs2228570(human) 		ClinVar
RGD		 PMID:24033266 PMID:25741868 PMID:28492532 PMID:29432829 PMID:20572305 More... RGD:14401747, RGD:14402026, RGD:14402025 NCBI chr15:97,752,308...97,806,177
Ensembl chr15:97,752,306...97,808,511 		JBrowse link
G Vegfa vascular endothelial growth factor A treatment
susceptibility
disease_progression 		ISO
IMP 		protein:increased expression:liver
DNA:SNP: :2578C>A (human)
associated with liver cirrhosis;
associated with liver cirrhosis; protein:increased expression:platelet, liver:
protein:increased expression:serum:
DNA:polymorphism:promoter:-2578C>A (rs699947)(human) 		RGD PMID:27338800 PMID:25999787 PMID:24445728 PMID:18392108 PMID:16835748 More... RGD:15003194, RGD:152177911, RGD:126848814, RGD:15036790, RGD:15014783, RGD:11527070, RGD:15003200, RGD:15003196, RGD:15003196 NCBI chr17:46,327,919...46,343,303
Ensembl chr17:46,327,919...46,343,295 		JBrowse link
G Vegfc vascular endothelial growth factor C ISO associated with liver cirrhosis; protein:increased expression:liver: RGD PMID:18544126 RGD:15003200 NCBI chr 8:54,530,567...54,639,489
Ensembl chr 8:54,530,641...54,640,131 		JBrowse link
G Vhl von Hippel-Lindau tumor suppressor disease_progression ISO RGD PMID:31321740 RGD:155882550 NCBI chr 6:113,600,955...113,608,595
Ensembl chr 6:113,600,920...113,608,594 		JBrowse link
G Vipr1 vasoactive intestinal peptide receptor 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:28284560 NCBI chr 9:121,471,782...121,502,020
Ensembl chr 9:121,471,782...121,502,020 		JBrowse link
G Vsig4 V-set and immunoglobulin domain containing 4 ISO CTD Direct Evidence: marker/mechanism CTD PMID:28284560 NCBI chr  X:95,290,807...95,337,044
Ensembl chr  X:95,290,809...95,337,044 		JBrowse link
G Wdr62 WD repeat domain 62 ISO CTD Direct Evidence: marker/mechanism CTD PMID:28284560 NCBI chr 7:29,939,563...29,980,243
Ensembl chr 7:29,939,563...29,979,844 		JBrowse link
G Wdr76 WD repeat domain 76 ISO CTD Direct Evidence: marker/mechanism CTD PMID:28284560 NCBI chr 2:121,337,204...121,375,341
Ensembl chr 2:121,337,204...121,375,341 		JBrowse link
G Wnt2 wingless-type MMTV integration site family, member 2 susceptibility ISO associated with hepatitis B;DNA:SNP: :rs4730775(human) RGD PMID:28328801 RGD:14402040 NCBI chr 6:17,988,939...18,032,771
Ensembl chr 6:17,988,939...18,030,584 		JBrowse link
G Wrap53 WD repeat containing, antisense to Trp53 ISO RNA:increased expression:liver: RGD PMID:26551349 RGD:11096781 NCBI chr11:69,452,580...69,471,076
Ensembl chr11:69,452,584...69,471,081 		JBrowse link
G Xdh xanthine dehydrogenase ISO protein:decreased activity:tumor (rat) RGD PMID:179860 RGD:5135059 NCBI chr17:74,190,890...74,257,191
Ensembl chr17:74,190,890...74,257,191 		JBrowse link
G Xpo1 exportin 1 ameliorates
exacerbates
treatment 		ISO human cell line in a mouse model
mRNA:increased expression:liver (human) 		RGD PMID:25030088 PMID:31371628 PMID:27013579 RGD:151665796, RGD:151667441, RGD:151667433 NCBI chr11:23,205,768...23,248,250
Ensembl chr11:23,206,055...23,248,249 		JBrowse link
G Xpo5 exportin 5 severity ISO DNA:snp, haplotype:3' utr:c.*659A>C (rs11077) (human) RGD PMID:24676133 RGD:11041737 NCBI chr17:46,513,737...46,554,524
Ensembl chr17:46,513,708...46,554,524 		JBrowse link
G Xrcc1 X-ray repair complementing defective repair in Chinese hamster cells 1 severity
susceptibility
disease_progression
no_association 		ISO associated with Chronic Hepatitis C;DNA:SNP:exon 14: c.1517G>C, p.506G>A (human)
DNA:SNPs:exon 9, exon 15: c.910A>G, c.1686C>G (human)
DNA:SNP:exon 13: c.1471G>A, p.E491K (human)
DNA:SNPs:cds: 194C>T, 280A>G (human)
associated with Hepatitis C, Chronic;DNA:missense mutation:cds:p.R399Q (human)
associated with Hepatitis C, Chronic;DNA:missense mutation:cds:p.R194W (human)
associated with hepatitis B;DNA:missense mutation, haplotype:cds:p.R399Q (human)
DNA:missense mutations:cds:p.R194W, p.R280H, p.R399Q (human)
DNA:missense mutation:cds:p.R399Q (rs25487) (human)
DNA:SNPs:exons:c.1254C>T, c.1517G>C (human)
DNA:missense mutation:cds:c.1804C>A (p.G506A) (human)
DNA:missense mutation:cds:p.R399Q (28152G>A) (rs25487) (human)
DNA:silent mutation, missense mutation:cds:c.1161G>A, c.1779C>G (p.L387L, p.S593R) (human)
DNA:missense mutations:cds:c.482C>T, c.1178G>A (p.P161L, p.R393H) (human) 		GAD
RGD		 PMID:15118671 PMID:32334466 PMID:24634229 PMID:24446299 PMID:28927037 More... RGD:1331525, RGD:150540333, RGD:150540332, RGD:150530624, RGD:150530503, RGD:15036797, RGD:15036797, RGD:15036794, RGD:15014792, RGD:15014791, RGD:15014790, RGD:15014789, RGD:14985243, RGD:14985242, RGD:14985240, RGD:14985238, RGD:14696773, RGD:14696772, RGD:14696702 NCBI chr 7:24,246,124...24,272,863
Ensembl chr 7:24,245,714...24,272,865 		JBrowse link
G Yap1 yes-associated protein 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:29698666 NCBI chr 9:7,932,000...8,004,890
Ensembl chr 9:7,932,000...8,004,597 		JBrowse link
G Ythdf2 YTH N6-methyladenosine RNA binding protein 2 ISO CTD Direct Evidence: marker/mechanism CTD PMID:28104805 NCBI chr 4:131,912,227...131,939,567
Ensembl chr 4:131,912,223...131,939,614 		JBrowse link
G Ywhaz tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide severity ISO RGD PMID:27811373 RGD:14700875 NCBI chr15:36,770,505...36,803,228
Ensembl chr15:36,771,014...36,797,173 		JBrowse link
G Zc3h12d zinc finger CCCH type containing 12D ISO CTD Direct Evidence: marker/mechanism CTD PMID:34545456 NCBI chr10:7,708,087...7,746,161
Ensembl chr10:7,708,234...7,746,160 		JBrowse link
G Zfhx3 zinc finger homeobox 3 severity
disease_progression 		ISO human cell line in a mouse model
associated with Chronic Hepatitis B;protein:decreased expression:blood serum (human) 		RGD PMID:32277050 PMID:20534899 RGD:151361162, RGD:151361169 NCBI chr 8:109,005,975...109,688,272
Ensembl chr 8:108,669,276...109,688,262 		JBrowse link
G Zfp36 zinc finger protein 36 ISO CTD Direct Evidence: marker/mechanism CTD PMID:28284560 NCBI chr 7:28,076,208...28,078,680
Ensembl chr 7:28,076,209...28,079,678 		JBrowse link
G Zfp612 zinc finger protein 612 ISO CTD Direct Evidence: marker/mechanism CTD PMID:21965783 NCBI chr 8:110,806,331...110,819,385
Ensembl chr 8:110,806,378...110,819,373 		JBrowse link
G Zic2 zinc finger protein of the cerebellum 2 ISO CTD Direct Evidence: marker/mechanism CTD PMID:28284560 NCBI chr14:122,712,796...122,717,740
Ensembl chr14:122,712,847...122,717,264 		JBrowse link
G Zic4 zinc finger protein of the cerebellum 4 ISO CTD Direct Evidence: marker/mechanism CTD PMID:28284560 NCBI chr 9:91,247,636...91,271,404
Ensembl chr 9:91,244,466...91,271,401 		JBrowse link
G Zic5 zinc finger protein of the cerebellum 5 ISO CTD Direct Evidence: marker/mechanism CTD PMID:28284560 NCBI chr14:122,696,572...122,703,127
Ensembl chr14:122,694,207...122,703,089 		JBrowse link
G Zwint ZW10 interactor ISO CTD Direct Evidence: marker/mechanism CTD PMID:28284560 NCBI chr10:72,490,678...72,510,796
Ensembl chr10:72,490,677...72,510,796 		JBrowse link
hepatocellular clear cell carcinoma term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Idh1 isocitrate dehydrogenase 1 (NADP+), soluble disease_progression ISO DNA:misssense mutation:cds:p.Arg132Cys(human)
DNA:polymorphism: :rs12478635(human) 		RGD PMID:28403884 PMID:25355558 RGD:14974227, RGD:14974228 NCBI chr 1:65,197,775...65,225,638
Ensembl chr 1:65,197,775...65,225,659 		JBrowse link
G Idh2 isocitrate dehydrogenase 2 (NADP+), mitochondrial disease_progression ISO DNA:polymorphism: :rs11632348(human) RGD PMID:25355558 RGD:14974228 NCBI chr 7:79,744,594...79,768,356
Ensembl chr 7:79,744,594...79,765,140 		JBrowse link
G Lep leptin ISO mRNA:increased expression:liver: RGD PMID:20723213 RGD:14696785 NCBI chr 6:29,060,220...29,073,875
Ensembl chr 6:29,060,219...29,073,876 		JBrowse link
G Lepr leptin receptor ISO mRNA:increased expression:liver: RGD PMID:20723213 RGD:14696785 NCBI chr 4:101,574,393...101,676,375
Ensembl chr 4:101,574,601...101,672,549 		JBrowse link
G Tert telomerase reverse transcriptase disease_progression ISO mRNA:increased expression:liver: RGD PMID:28460432 PMID:20723213 RGD:14696783, RGD:14696785 NCBI chr13:73,775,030...73,797,962
Ensembl chr13:73,775,030...73,797,962 		JBrowse link
intrahepatic cholangiocarcinoma term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apc APC, WNT signaling pathway regulator ISO ClinVar Annotator: match by term: Intrahepatic cholangiocarcinoma ClinVar PMID:24728327 PMID:25479140 PMID:25741868 PMID:26467025 PMID:26530882 More... NCBI chr18:34,353,350...34,455,243
Ensembl chr18:34,353,977...34,455,605 		JBrowse link
G Arid1a AT-rich interaction domain 1A disease_progression
exacerbates 		ISO mRNA,protein:decreased expression:intrahepatic bile duct (human) RGD PMID:30849962 PMID:27433094 PMID:31665232 RGD:14974231, RGD:126775257, RGD:126781775 NCBI chr 4:133,406,319...133,484,682
Ensembl chr 4:133,406,319...133,484,080 		JBrowse link
G Bap1 Brca1 associated protein 1 disease_progression ISO RGD PMID:27864835 RGD:150340628 NCBI chr14:30,973,358...30,981,887
Ensembl chr14:30,973,407...30,981,901 		JBrowse link
G Becn1 beclin 1, autophagy related disease_progression ISO RGD PMID:30849962 RGD:14974231 NCBI chr11:101,179,084...101,193,112
Ensembl chr11:101,176,778...101,193,112 		JBrowse link
G Braf Braf transforming gene severity IAGP DNA:missense mutation:cds:p.V600E (human) RGD PMID:24139215 RGD:14398746 NCBI chr 6:39,580,171...39,702,592
Ensembl chr 6:39,580,171...39,702,397 		JBrowse link
G Fas Fas cell surface death receptor disease_progression ISO RGD PMID:11003620 RGD:14700701 NCBI chr19:34,267,926...34,305,175
Ensembl chr19:34,268,066...34,305,172 		JBrowse link
G Fasl Fas ligand severity ISO RGD PMID:11003620 RGD:14700701 NCBI chr 1:161,608,260...161,616,064
Ensembl chr 1:161,608,258...161,616,064 		JBrowse link
G Foxp3 forkhead box P3 ISO DNA:hypomethylation:liver RGD PMID:24291052 RGD:38599002 NCBI chr  X:7,445,915...7,461,482
Ensembl chr  X:7,439,883...7,461,484 		JBrowse link
G Hsp90aa1 heat shock protein 90, alpha (cytosolic), class A member 1 disease_progression ISO protein:increased expression:liver (human) RGD PMID:24796583 RGD:152177907 NCBI chr12:110,657,470...110,662,829
Ensembl chr12:110,657,039...110,669,162 		JBrowse link
G Hsp90ab1 heat shock protein 90 alpha (cytosolic), class B member 1 disease_progression ISO protein:increased expression:liver (human) RGD PMID:24796583 RGD:152177907 NCBI chr17:45,878,704...45,884,187
Ensembl chr17:45,878,701...45,884,197 		JBrowse link
G Idh1 isocitrate dehydrogenase 1 (NADP+), soluble no_association ISO DNA:misssense mutations:cds:p.Arg132Cys,Arg132Leu (human) RGD PMID:26245674 RGD:14974229 NCBI chr 1:65,197,775...65,225,638
Ensembl chr 1:65,197,775...65,225,659 		JBrowse link
G Idh2 isocitrate dehydrogenase 2 (NADP+), mitochondrial disease_progression ISO
IEP 		DNA:mutations: :
mRNA:decreased expression:liver (mouse) 		RGD PMID:22824796 PMID:32463951 RGD:14985256, RGD:149735894 NCBI chr 7:79,744,594...79,768,356
Ensembl chr 7:79,744,594...79,765,140 		JBrowse link
G Kdm5c lysine demethylase 5C exacerbates ISO protein:decreased expression:bile duct (human) RGD PMID:32714863 RGD:151361175 NCBI chr  X:151,015,698...151,062,098
Ensembl chr  X:151,016,016...151,057,531 		JBrowse link
G Kras Kirsten rat sarcoma viral oncogene homolog disease_progression IAGP
ISO 		DNA:mutations:: MouseDO
RGD		 PMID:24139215 RGD:14398746 NCBI chr 6:145,162,425...145,197,631
Ensembl chr 6:145,162,425...145,195,965 		JBrowse link
G Lcn2 lipocalin 2 treatment ISO Protein:increased expression:bile duct RGD PMID:24939880 PMID:24939880 RGD:126790491, RGD:126790491 NCBI chr 2:32,274,649...32,277,751
Ensembl chr 2:32,274,645...32,278,264 		JBrowse link
G Lrp1b low density lipoprotein-related protein 1B exacerbates ISO DNA:mutations:multiple: (human) RGD PMID:33014052 RGD:150429786 NCBI chr 2:40,485,302...42,543,747
Ensembl chr 2:40,485,258...42,543,636 		JBrowse link
G Magi1 membrane associated guanylate kinase, WW and PDZ domain containing 1 disease_progression ISO protein:increased expression:intrahepatic bile duct (human) RGD PMID:30377796 RGD:152998946 NCBI chr 6:93,652,434...94,260,906
Ensembl chr 6:93,652,436...94,260,898 		JBrowse link
G Mir152 microRNA 152 ISO miRNA:decreased expression:intrahepatic bile duct RGD PMID:28921383 RGD:19165148 NCBI chr11:96,741,219...96,741,291
Ensembl chr11:96,741,219...96,741,291 		JBrowse link
G Mir200b microRNA 200b ISO RNA:increased expression:liver RGD PMID:27685844 RGD:14928335 NCBI chr 4:156,140,138...156,140,207
Ensembl chr 4:156,140,138...156,140,207 		JBrowse link
G Mir21a microRNA 21a ISO RNA:increased expression:liver,plasma RGD PMID:27685844 RGD:14928335 NCBI chr11:86,474,893...86,474,984
Ensembl chr11:86,474,893...86,474,984 		JBrowse link
G Mir221 microRNA 221 severity ISO RGD PMID:27685844 RGD:14928335 NCBI chr  X:19,012,533...19,012,627
Ensembl chr  X:19,012,533...19,012,627 		JBrowse link
G Pbrm1 polybromo 1 disease_progression ISO protein:increased expression:intrahepatic bile duct (human) RGD PMID:30377796 PMID:27864835 RGD:152998946, RGD:150340628 NCBI chr14:30,741,095...30,843,549
Ensembl chr14:30,741,095...30,843,549 		JBrowse link
G Pten phosphatase and tensin homolog disease_progression ISO protein:decreased expression:liver (human) RGD PMID:24796583 RGD:152177907 NCBI chr19:32,734,977...32,803,560
Ensembl chr19:32,734,897...32,803,560 		JBrowse link
G Rnf43 ring finger protein 43 exacerbates ISO mRNA, protein:decreased expression:liver, bile duct epithelium (human) RGD PMID:26980022 RGD:151361125 NCBI chr11:87,553,913...87,626,365
Ensembl chr11:87,553,548...87,626,365 		JBrowse link
G Runx1 runt related transcription factor 1 ISO mRNA:increased expression:intrahepatic bile duct RGD PMID:31015363 RGD:126775143 NCBI chr16:92,398,354...92,622,962
Ensembl chr16:92,398,354...92,623,037 		JBrowse link
G S100b S100 protein, beta polypeptide, neural disease_progression ISO protein:increased expression:intrahepatic bile duct (human) RGD PMID:30377796 RGD:152998946 NCBI chr10:76,089,670...76,097,153
Ensembl chr10:76,089,687...76,096,993 		JBrowse link
G Smad4 SMAD family member 4 disease_progression ISO mRNA,protein:decreased expression:intrahepatic bile duct RGD PMID:16917866 PMID:23981608 RGD:18936999, RGD:21066336 NCBI chr18:73,767,861...73,836,862
Ensembl chr18:73,772,080...73,836,851 		JBrowse link
G Tep1 telomerase associated protein 1 ISO mRNA:increased expression:hepatocyte,biliary epithelium. RGD PMID:10498642 RGD:152977753 NCBI chr14:51,061,513...51,108,036
Ensembl chr14:51,061,516...51,108,017 		JBrowse link
G Terc telomerase RNA component ISO RNA:increased expression:hepatocyte,biliary epithelium. RGD PMID:10498642 RGD:152977753 NCBI chr 3:96,321,753...96,322,149
Ensembl chr 3:96,321,753...96,322,149 		JBrowse link
Klatskin's tumor term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apc APC, WNT signaling pathway regulator ISO ClinVar Annotator: match by term: Klatskin tumor ClinVar PMID:25741868 PMID:28492532 NCBI chr18:34,353,350...34,455,243
Ensembl chr18:34,353,977...34,455,605 		JBrowse link
G Arid1a AT-rich interaction domain 1A disease_progression ISO DNA:deletions RGD PMID:33387086 RGD:126848756 NCBI chr 4:133,406,319...133,484,682
Ensembl chr 4:133,406,319...133,484,080 		JBrowse link
G Gata6 GATA binding protein 6 sexual_dimorphism ISO DNA:mutations RGD PMID:33387086 RGD:126848756 NCBI chr18:11,052,510...11,085,636
Ensembl chr18:11,052,064...11,085,635 		JBrowse link
G Kmt2c lysine (K)-specific methyltransferase 2C onset ISO DNA:mutations RGD PMID:33387086 RGD:126848756 NCBI chr 5:25,476,793...25,703,853
Ensembl chr 5:25,476,796...25,703,781 		JBrowse link
G Kras Kirsten rat sarcoma viral oncogene homolog disease_progression ISO DNA:mutations RGD PMID:33387086 RGD:126848756 NCBI chr 6:145,162,425...145,197,631
Ensembl chr 6:145,162,425...145,195,965 		JBrowse link
G Prex2 phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 2 sexual_dimorphism ISO DNA:substitutions, insertion/deletions: (human) RGD PMID:33387086 PMID:33387086 RGD:126848756, RGD:126848756 NCBI chr 1:11,063,496...11,373,907
Ensembl chr 1:11,063,689...11,373,905 		JBrowse link
liver cancer term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abca1 ATP-binding cassette, sub-family A member 1 severity IMP mRNA:decreased expression:liver (mouse) RGD PMID:30580964 RGD:24922199 NCBI chr 4:53,030,789...53,159,988
Ensembl chr 4:53,030,787...53,159,895 		JBrowse link
G Abcb11 ATP-binding cassette, sub-family B member 11 IEP mRNA:decreased expression:liver RGD PMID:29651702 RGD:14402411 NCBI chr 2:69,068,626...69,172,960
Ensembl chr 2:69,068,626...69,172,958 		JBrowse link
G Acot12 acyl-CoA thioesterase 12 ISO RGD PMID:2566591 RGD:13831129 NCBI chr13:91,889,635...91,934,271
Ensembl chr13:91,889,631...91,934,267 		JBrowse link
G Adam28 a disintegrin and metallopeptidase domain 28 ISO mRNA:increased expression:liver RGD PMID:32782619 RGD:153297784 NCBI chr14:68,842,447...68,893,338
Ensembl chr14:68,843,476...68,893,291 		JBrowse link
G Aldh2 aldehyde dehydrogenase 2, mitochondrial IMP DNA:missense mutation:cds:p.E487K (mouse) RGD PMID:26150517 RGD:14696779 NCBI chr 5:121,704,090...121,731,887
Ensembl chr 5:121,704,090...121,731,887 		JBrowse link
G Atm ataxia telangiectasia mutated ameliorates IMP RGD PMID:19919837 RGD:150340702 NCBI chr 9:53,348,422...53,448,125
Ensembl chr 9:53,350,449...53,448,040 		JBrowse link
G Ccnd1 cyclin D1 disease_progression ISO protein:increased expression:liver (rat) RGD PMID:11797828 RGD:151356973 NCBI chr 7:144,483,668...144,493,568
Ensembl chr 7:144,483,668...144,493,662 		JBrowse link
G Ccnd2 cyclin D2 disease_progression ISO RGD PMID:30308939 RGD:151665105 NCBI chr 6:127,102,125...127,131,913
Ensembl chr 6:127,102,125...127,129,156 		JBrowse link
G Ccne1 cyclin E1 disease_progression ISO protein:increased expression:liver (rat) RGD PMID:11797828 RGD:151356973 NCBI chr 7:37,797,409...37,806,915
Ensembl chr 7:37,797,409...37,806,959 		JBrowse link
G Cdh1 cadherin 1 IEP mRNA:increased expression:liver (mouse) RGD PMID:25319454 RGD:152995431 NCBI chr 8:107,329,982...107,396,879
Ensembl chr 8:107,329,983...107,396,878 		JBrowse link
G Ces1d carboxylesterase 1D treatment ISO RGD PMID:27523631 RGD:152995275 NCBI chr 8:93,892,700...93,924,432
Ensembl chr 8:93,892,696...93,924,466 		JBrowse link
G Chuk conserved helix-loop-helix ubiquitous kinase ISO human cells in mouse model RGD PMID:27367027 RGD:153305911 NCBI chr19:44,061,773...44,095,940
Ensembl chr19:44,061,774...44,095,919 		JBrowse link
G Gpt glutamic pyruvic transaminase, soluble treatment ISO RGD PMID:22922605 RGD:14975251 NCBI chr15:76,580,926...76,583,875
Ensembl chr15:76,579,916...76,583,886 		JBrowse link
G Gpt2 glutamic pyruvate transaminase (alanine aminotransferase) 2 treatment ISO RGD PMID:22922605 RGD:14975251 NCBI chr 8:86,219,090...86,255,531
Ensembl chr 8:86,219,205...86,254,189 		JBrowse link
G Hras Harvey rat sarcoma virus oncogene IAGP DNA:missense mutations:cds:p.Q61L, p.Q61K, p.Q61R (mouse) RGD PMID:9142214 RGD:14688053 NCBI chr 7:140,770,839...140,773,938
Ensembl chr 7:140,769,018...140,773,918 		JBrowse link
G Ikbkb inhibitor of kappaB kinase beta ISO human cells in mouse model RGD PMID:27367027 RGD:153305911 NCBI chr 8:23,149,228...23,196,605
Ensembl chr 8:23,149,228...23,196,605 		JBrowse link
G Ikbkg inhibitor of kappaB kinase gamma ISO human cells in mouse model RGD PMID:27367027 RGD:153305911 NCBI chr  X:73,436,883...73,498,013
Ensembl chr  X:73,436,896...73,497,460 		JBrowse link
G Il10 interleukin 10 ISO RGD PMID:30610790 RGD:14975253 NCBI chr 1:130,947,459...130,952,707
Ensembl chr 1:130,947,582...130,952,711 		JBrowse link
G Jag1 jagged 1 treatment IMP miRNA:decreased expression:liver RGD PMID:25311838 RGD:14694834 NCBI chr 2:136,923,371...136,958,440
Ensembl chr 2:136,923,376...136,958,564 		JBrowse link
G Jak2 Janus kinase 2 severity IEP
IMP 		mRNA:increased expression:liver,serum (human)
human cell line in a mouse model 		RGD PMID:27788478 PMID:27788478 RGD:18182929, RGD:18182929 NCBI chr19:29,229,006...29,290,495
Ensembl chr19:29,229,228...29,290,480 		JBrowse link
G Krt18 keratin 18 severity IMP associated with fatty liver disease RGD PMID:27689336 RGD:18337485 NCBI chr15:101,936,651...101,940,461
Ensembl chr15:101,936,615...101,940,462 		JBrowse link
G Mapk14 mitogen-activated protein kinase 14 exacerbates IMP RGD PMID:17468757 RGD:151665350 NCBI chr17:28,910,316...28,967,379
Ensembl chr17:28,910,303...28,967,380 		JBrowse link
G Pcna proliferating cell nuclear antigen disease_progression ISO protein:increased expression:liver (rat) RGD PMID:11797828 RGD:151356973 NCBI chr 2:132,091,206...132,095,100
Ensembl chr 2:132,091,082...132,095,234 		JBrowse link
G Pik3ca phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha susceptibility IMP RGD PMID:20583210 RGD:14402407 NCBI chr 3:32,451,203...32,520,256
Ensembl chr 3:32,451,820...32,522,635 		JBrowse link
G Setd2 SET domain containing 2 ISO protein:decreased expression:liver (human) RGD PMID:26172293 RGD:11530741 NCBI chr 9:110,361,368...110,447,703
Ensembl chr 9:110,358,262...110,447,701 		JBrowse link
G Slco1a4 solute carrier organic anion transporter family, member 1a4 IEP mRNA:decreased expression:liver (mouse) RGD PMID:25319454 RGD:152995431 NCBI chr 6:141,751,164...141,802,011
Ensembl chr 6:141,751,166...141,801,925 		JBrowse link
G Slco1b2 solute carrier organic anion transporter family, member 1b2 IEP mRNA:decreased expression:liver (mouse) RGD PMID:25319454 RGD:152995431 NCBI chr 6:141,575,178...141,632,372
Ensembl chr 6:141,575,244...141,632,372 		JBrowse link
G Slco2b1 solute carrier organic anion transporter family, member 2b1 disease_progression ISO mRNA:decreased expression:liver (human) RGD PMID:21625523 RGD:152995425 NCBI chr 7:99,307,011...99,360,547
Ensembl chr 7:99,307,011...99,360,547 		JBrowse link
G Xrcc1 X-ray repair complementing defective repair in Chinese hamster cells 1 severity ISO mRNA:increased expression:liver (human) RGD PMID:30088263 RGD:15036795 NCBI chr 7:24,246,124...24,272,863
Ensembl chr 7:24,245,714...24,272,865 		JBrowse link
liver carcinoma term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp7b ATPase, copper transporting, beta polypeptide ISO RGD PMID:11509115 RGD:1302456 NCBI chr 8:22,482,799...22,550,347
Ensembl chr 8:22,482,801...22,550,321 		JBrowse link
G Ddr2 discoidin domain receptor family, member 2 ameliorates IAGP DNA:deletion:exons: RGD PMID:24293323 RGD:150429711 NCBI chr 1:169,799,874...169,938,525
Ensembl chr 1:169,799,876...169,938,331 		JBrowse link
G Hmbs hydroxymethylbilane synthase sexual_dimorphism ISO Protein:increased activity:liver (rat) RGD PMID:1781034 RGD:25440495 NCBI chr 9:44,247,645...44,255,525
Ensembl chr 9:44,247,636...44,255,525 		JBrowse link
G Hras Harvey rat sarcoma virus oncogene ISO DNA:hypomethylation RGD PMID:3345576 RGD:14694848 NCBI chr 7:140,770,839...140,773,938
Ensembl chr 7:140,769,018...140,773,918 		JBrowse link
G Il10 interleukin 10 ISO DNA:SNP:promoter:-592C>A (rs1800872) (human) RGD PMID:28763918 RGD:14975157 NCBI chr 1:130,947,459...130,952,707
Ensembl chr 1:130,947,582...130,952,711 		JBrowse link
G Nras neuroblastoma ras oncogene ISO mRNA:increased expression:liver (human) RGD PMID:3018923 RGD:14975106 NCBI chr 3:102,965,643...102,975,230
Ensembl chr 3:102,965,601...102,975,230 		JBrowse link
G Pdcd10 programmed cell death 10 ISO protein:increased expression:liver (human) RGD PMID:32186778 RGD:401827111 NCBI chr 3:75,423,797...75,464,159
Ensembl chr 3:75,423,797...75,464,163 		JBrowse link
Liver Metastasis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ace angiotensin I converting enzyme IEP associated with colorectal cancer;mRNA:increased expression:liver (mouse) RGD PMID:20380732 RGD:25671446 NCBI chr11:105,858,774...105,880,790
Ensembl chr11:105,858,771...105,880,790 		JBrowse link
G Braf Braf transforming gene severity IAGP associated with colorectal cancer;DNA:mutation:cds:
associated with colorectal cancer;DNA:missense mutation:cds:p.V600E (human)
associated with colorectal cancer;DNA:missense mutations:cds:pV599E,p.V600E (human)
associated with skin melanoma;DNA:missense mutations:cds:
associated with colorectal cancer;DNA:mutations:multiple 		RGD PMID:27737491 PMID:23010994 PMID:22331825 PMID:28787433 PMID:26775732 RGD:18337264, RGD:15039394, RGD:18337265, RGD:14696791, RGD:11554843 NCBI chr 6:39,580,171...39,702,592
Ensembl chr 6:39,580,171...39,702,397 		JBrowse link
G Ccl2 C-C motif chemokine ligand 2 disease_progression ISO associated with colorectal cancer RGD PMID:27058904 RGD:14995463 NCBI chr11:81,926,403...81,928,278
Ensembl chr11:81,926,397...81,928,279 		JBrowse link
G Ccl5 C-C motif chemokine ligand 5 treatment IMP associated with Animal Mammary Neoplasms; RGD PMID:15692764 RGD:14995455 NCBI chr11:83,416,604...83,421,344
Ensembl chr11:83,416,604...83,421,344 		JBrowse link
G Ccnd2 cyclin D2 ISO associated with colorectal cancer;protein:increased expression:colorectum RGD PMID:19508551 RGD:151665111 NCBI chr 6:127,102,125...127,131,913
Ensembl chr 6:127,102,125...127,129,156 		JBrowse link
G Ccng1 cyclin G1 treatment ISO human cells in mouse model RGD PMID:10910035 RGD:151356987 NCBI chr11:40,639,379...40,646,044
Ensembl chr11:40,639,379...40,646,138 		JBrowse link
G Cd44 CD44 antigen ISO associated with Breast Neoplasm;protein:increased expression:liver RGD PMID:17991717 RGD:2289349 NCBI chr 2:102,641,486...102,732,014
Ensembl chr 2:102,641,486...102,732,010 		JBrowse link
G Chd4 chromodomain helicase DNA binding protein 4 ameliorates ISO associated with human colon adenocarcinoma cells in a mouse model RGD PMID:28486105 RGD:153323299 NCBI chr 6:125,073,144...125,107,554
Ensembl chr 6:125,072,944...125,107,554 		JBrowse link
G Cxcl10 C-X-C motif chemokine ligand 10 treatment IDA associated with colon carcinoma; RGD PMID:30381616 RGD:27095891 NCBI chr 5:92,494,497...92,496,748
Ensembl chr 5:92,494,497...92,496,748 		JBrowse link
G Cxcl12 C-X-C motif chemokine ligand 12 ameliorates ISO associated with colorectal cancer; human cells in mouse model RGD PMID:30789971 RGD:151893289 NCBI chr 6:117,145,496...117,158,329
Ensembl chr 6:117,145,496...117,158,328 		JBrowse link
G Cxcl15 C-X-C motif chemokine ligand 15 ISO associated with colorectal cancer; human colon adenocarcinoma cells in a mouse model RGD PMID:29679563 RGD:26884358 NCBI chr 5:90,942,393...90,950,926
Ensembl chr 5:90,942,393...90,950,926 		JBrowse link
G Cxcr4 C-X-C motif chemokine receptor 4 ameliorates ISO associated with colorectal cancer; human cells in mouse model
human cells in mouse model; associated with colorectal cancer 		RGD PMID:30789971 PMID:29436696 RGD:151893289, RGD:152023643 NCBI chr 1:128,515,936...128,520,036
Ensembl chr 1:128,515,936...128,520,030 		JBrowse link
G Daxx Fas death domain-associated protein exacerbates ISO associated with colon cancer; mRNA:decreased expression:liver (human)
associated with neuroendocrine tumor;DNA:mutations:CDS:multiple (human)
associated with pancreatic endocrine carcinoma;DNA:mutations:CDS:multiple (human) 		RGD PMID:31942198 PMID:30342802 PMID:30339629 RGD:152025194, RGD:152025199, RGD:152025203 NCBI chr17:34,128,379...34,134,564
Ensembl chr17:34,128,388...34,134,564 		JBrowse link
G Ddr1 discoidin domain receptor family, member 1 treatment IMP
ISO
IEP 		human cells in mouse model; nilotinib
mRNA:increased expression:liver (mouse) 		RGD PMID:33110221 PMID:29438985 PMID:30666650 RGD:151347537, RGD:151347685, RGD:151347840 NCBI chr17:35,992,459...36,015,633
Ensembl chr17:35,992,459...36,015,513 		JBrowse link
G Ddr2 discoidin domain receptor family, member 2 ameliorates IMP
ISO 		associated with colon carcinoma
associated with melanoma; 		RGD PMID:22071959 PMID:21701781 RGD:150429701, RGD:150429713 NCBI chr 1:169,799,874...169,938,525
Ensembl chr 1:169,799,876...169,938,331 		JBrowse link
G Dock6 dedicator of cytokinesis 6 ameliorates ISO associated with stomach cancer; RGD PMID:29587866 RGD:155791564 NCBI chr 9:21,711,476...21,764,006
Ensembl chr 9:21,711,156...21,763,931 		JBrowse link
G Fbxw7 F-box and WD-40 domain protein 7 disease_progression ISO associated with colorectal cancer; RGD PMID:28846828 RGD:21408566 NCBI chr 3:84,721,901...84,886,505
Ensembl chr 3:84,722,575...84,886,505 		JBrowse link
G Fgfr1 fibroblast growth factor receptor 1 ISO associated with colorectal cancer;mRNA:increased expression:colorectal mucosa: RGD PMID:19082464 RGD:25330357 NCBI chr 8:26,008,808...26,067,819
Ensembl chr 8:26,003,670...26,065,734 		JBrowse link
G Fosl2 fos-like antigen 2 ISO human cells in mouse model RGD PMID:30114390 RGD:153344554 NCBI chr 5:32,292,599...32,315,184
Ensembl chr 5:32,293,145...32,315,186 		JBrowse link
G Gpc3 glypican 3 ISO protein:increased expression:blood serum (human) RGD PMID:28801286 RGD:243065135 NCBI chr  X:51,361,303...51,702,851
Ensembl chr  X:51,361,303...51,702,827 		JBrowse link
G Hmbs hydroxymethylbilane synthase ISO associated with colon adenocarcinoma;protein:decreased activity:liver(rat) RGD PMID:1386052 RGD:25440496 NCBI chr 9:44,247,645...44,255,525
Ensembl chr 9:44,247,636...44,255,525 		JBrowse link
G Il2 interleukin 2 treatment ISO associated with Colorectal Neoplasms, Carcinoma, Hepatocellular;
associated with colon carcinoma 		RGD PMID:11591892 PMID:9354462 RGD:8663446, RGD:14928215 NCBI chr 3:37,174,862...37,180,103
Ensembl chr 3:37,174,672...37,180,108 		JBrowse link
G Iqsec1 IQ motif and Sec7 domain 1 ISO human cells in mouse model RGD PMID:22662237 RGD:153344589 NCBI chr 6:90,636,578...90,965,766
Ensembl chr 6:90,633,070...90,965,667 		JBrowse link
G Map2k7 mitogen-activated protein kinase kinase 7 ISO associated with colon cancer;protein:increased expression:colon (human) RGD PMID:24533778 RGD:155259116 NCBI chr 8:4,288,740...4,297,897
Ensembl chr 8:4,288,740...4,297,897
Ensembl chr 8:4,288,740...4,297,897 		JBrowse link
G Mir141 microRNA 141 ISO associated with colorectal cancer;RNA:increased expression:liver: RGD PMID:28617555 RGD:14928321 NCBI chr 6:124,694,877...124,694,948
Ensembl chr 6:124,694,877...124,694,948 		JBrowse link
G Mir148b microRNA 148b exacerbates ISO associated with stomach cancer; RGD PMID:29587866 RGD:155791564 NCBI chr15:103,193,552...103,193,648
Ensembl chr15:103,193,552...103,193,648 		JBrowse link
G Mir155 microRNA 155 ISO RGD PMID:26885061 RGD:21079444 NCBI chr16:84,511,028...84,511,092
Ensembl chr16:84,511,028...84,511,092 		JBrowse link
G Mir200b microRNA 200b ISO associated with colorectal cancer;RNA:increased expression:liver: RGD PMID:28617555 RGD:14928321 NCBI chr 4:156,140,138...156,140,207
Ensembl chr 4:156,140,138...156,140,207 		JBrowse link
G Mir200c microRNA 200c ISO associated with colorectal cancer;RNA:increased expression:liver: RGD PMID:28617555 RGD:14928321 NCBI chr 6:124,695,285...124,695,353
Ensembl chr 6:124,695,285...124,695,353 		JBrowse link
G Mir223 microRNA 223 disease_progression ISO associated with colorectal cancer; RGD PMID:28846828 RGD:21408566 NCBI chr  X:95,286,423...95,286,532
Ensembl chr  X:95,286,423...95,286,532 		JBrowse link
G Mir494 microRNA 494 exacerbates ISO associated with pancreatic ductal adenocarcinoma; RGD PMID:24859161 RGD:156430321 NCBI chr12:109,681,752...109,681,836
Ensembl chr12:109,681,752...109,681,836 		JBrowse link
G Mpl myeloproliferative leukemia virus oncogene exacerbates
severity 		IMP
ISO 		associated with pancreatic ductal adenocarcinoma; human cells in mouse model
associated with pancreatic cancer; protein:increased expression:liver, pancreas (human)
associated with colorectal carcinoma;protein:increased expression:colorectum (human) 		RGD PMID:30770989 PMID:30770989 PMID:23747337 RGD:126925751, RGD:126925751, RGD:126925752 NCBI chr 4:118,299,609...118,314,771
Ensembl chr 4:118,299,612...118,314,710 		JBrowse link
G Nras neuroblastoma ras oncogene susceptibility ISO human gene in a mouse model;DNA:missense mutations:cds:p.G12V, p.Q61K (human)
associated with melanoma;DNA:mutations: exons (human)
associated with colorectal cancer;DNA:mutations:exons (human) 		RGD PMID:26799184 PMID:28787433 PMID:28011498 RGD:14696774, RGD:14696791, RGD:14696792 NCBI chr 3:102,965,643...102,975,230
Ensembl chr 3:102,965,601...102,975,230 		JBrowse link
G Ptprb protein tyrosine phosphatase receptor type B treatment IMP mouse tumor cells in mouse recipient RGD PMID:31348125 RGD:151660353 NCBI chr10:116,111,407...116,225,443
Ensembl chr10:116,111,428...116,225,440 		JBrowse link
G Rictor RPTOR independent companion of MTOR, complex 2 disease_progression IMP
ISO 		mRNA:increased expression:liver (human) RGD PMID:30404068 PMID:30404068 RGD:152995463, RGD:152995463 NCBI chr15:6,737,827...6,829,882
Ensembl chr15:6,737,860...6,829,882 		JBrowse link
G Rnf43 ring finger protein 43 ISO associated with colorectal adenocarcinoma;mRNA:increased expression:liver (human) RGD PMID:28789449 RGD:151361221 NCBI chr11:87,553,913...87,626,365
Ensembl chr11:87,553,548...87,626,365 		JBrowse link
G Slc3a2 solute carrier family 3 (activators of dibasic and neutral amino acid transport), member 2 severity ISO associated with colon adenocarcinoma RGD PMID:11745822 RGD:151361130 NCBI chr19:8,684,931...8,700,733
Ensembl chr19:8,684,246...8,700,733 		JBrowse link
G Slc7a5 solute carrier family 7 (cationic amino acid transporter, y+ system), member 5 severity ISO associated with colon cancer
associated with colon adenocarcinoma 		RGD PMID:11718450 PMID:11745822 RGD:151361129, RGD:151361130 NCBI chr 8:122,607,885...122,634,425
Ensembl chr 8:122,607,889...122,634,433 		JBrowse link
G Smad4 SMAD family member 4 treatment ISO associated with colorectal carcinoma; DNA:mutations: :
associated with colorectal carcinoma;protein:decreased expression:colorectum: 		RGD PMID:29551247 PMID:17390050 RGD:18937000, RGD:21066338 NCBI chr18:73,767,861...73,836,862
Ensembl chr18:73,772,080...73,836,851 		JBrowse link
G Sox30 SRY (sex determining region Y)-box 30 ameliorates IDA RGD PMID:29739711 RGD:151660333 NCBI chr11:45,869,873...45,908,824
Ensembl chr11:45,871,137...45,908,821 		JBrowse link
G Src Rous sarcoma oncogene disease_progression ISO associated with colon cancer;protein:increased activity:colon RGD PMID:7678609 RGD:150521542 NCBI chr 2:157,265,828...157,313,758
Ensembl chr 2:157,260,364...157,313,782 		JBrowse link
G Vegfa vascular endothelial growth factor A ISO associated with colorectal carcinoma;mRNA,protein:increased expression:liver: RGD PMID:22156924 RGD:15014782 NCBI chr17:46,327,919...46,343,303
Ensembl chr17:46,327,919...46,343,295 		JBrowse link
mixed fibrolamellar hepatocellular carcinoma term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Prkaca protein kinase, cAMP dependent, catalytic, alpha susceptibility IGI RGD PMID:28923495 RGD:151347843 NCBI chr 8:84,699,607...84,723,073
Ensembl chr 8:84,699,622...84,723,072 		JBrowse link
Ruijs-Aalfs syndrome term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sprtn SprT-like N-terminal domain ISO ClinVar Annotator: match by term: Progeroid features-hepatocellular carcinoma predisposition syndrome | ClinVar Annotator: match by term: SPRTN-related condition OMIM
ClinVar		 PMID:12503110 PMID:25261934 PMID:25741868 PMID:28492532 NCBI chr 8:125,624,612...125,632,903
Ensembl chr 8:125,624,625...125,632,900 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  disease 16271
    disease of cellular proliferation 7724
      cancer 5671
        organ system cancer 5427
          gastrointestinal system cancer 2920
            hepatobiliary system cancer 1087
              biliary tract cancer + 184
              liver cancer + 997
Path 2
Term Annotations click to browse term
  disease 16271
    disease of anatomical entity 15863
      gastrointestinal system disease 6895
        Digestive System Neoplasms 3840
          Gastrointestinal Neoplasms 3716
            gastrointestinal system cancer 2920
              hepatobiliary system cancer 1087
                biliary tract cancer + 184
                liver cancer + 997
paths to the root