Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
Advanced Search (OLGA)

RGD DISEASE ONTOLOGY - ANNOTATIONS

RGD uses the Human Disease Ontology (DO, https://disease-ontology.org/) for disease curation across species. RGD automatically downloads each new release of the ontology on a monthly basis. Some additional terms which are required for RGD's curation purposes but are not currently covered in the official version of DO have been added. As corresponding terms are added to DO, these custom terms are retired and the DO terms substituted in existing annotations and subsequently used for curation.
Term:male reproductive organ benign neoplasm
go back to main search page
Accession:DOID:0060087 term browser browse the term
Definition:A reproductive organ benign neoplasm that is characterized by a lack of malignancy located_in the male reproductive system. (DO)
Synonyms:primary_id: RDO:9002414


show annotations for term's descendants           Sort by:
penile benign neoplasm term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ccnd1 cyclin D1 ISO protein:increased expression:nucleus RGD PMID:17695500 RGD:2289129 NCBI chr 1:200,089,002...200,098,524
Ensembl chr 1:200,089,002...200,098,602 		JBrowse link
G Ptges prostaglandin E synthase ISO protein:increased expression:penis, skin RGD PMID:14871981 RGD:2300087 NCBI chr 3:14,177,892...14,189,236 JBrowse link
G Top2a DNA topoisomerase II alpha severity ISO RGD PMID:18489530 RGD:2315128 NCBI chr10:83,945,731...83,976,874
Ensembl chr10:83,945,735...83,976,874 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  disease 19137
    disease of anatomical entity 18450
      reproductive system disease 3190
        reproductive organ benign neoplasm 43
          male reproductive organ benign neoplasm 3
            benign prostate phyllodes tumor 0
            epididymis adenomatoid tumor 0
            lipoma of spermatic cord 0
            penile benign neoplasm 3
            prostate leiomyoma 0
            prostatic adenoma 0
            rete testis adenoma 0
            seminal vesicle tumor + 0
            testicular fibroma 0
            testicular gonadoblastoma 0
            testicular granulosa cell tumor + 0
            testicular thecoma 0
Path 2
Term Annotations click to browse term
  disease 19137
    disease of anatomical entity 18450
      Urogenital Diseases 5390
        reproductive system disease 3190
          male reproductive system disease 2044
            Male Genital Neoplasms 1337
              male reproductive organ benign neoplasm 3
                benign prostate phyllodes tumor 0
                epididymis adenomatoid tumor 0
                lipoma of spermatic cord 0
                penile benign neoplasm 3
                prostate leiomyoma 0
                prostatic adenoma 0
                rete testis adenoma 0
                seminal vesicle tumor + 0
                testicular fibroma 0
                testicular gonadoblastoma 0
                testicular granulosa cell tumor + 0
                testicular thecoma 0
paths to the root