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CLINICAL MEASUREMENT - ANNOTATIONS

The Clinical Measurement Ontology (CMO), Measurement Methods Ontology (MMO), and Experimental Condition Ontology (XCO) are currently being developed at the Rat Genome Database. For more information about these vocabularies please see Shimoyama et al. Three ontologies to define phenotype measurement data. Front Genet. 2012;3:87. Epub 2012 May 28 or contact us (http://rgd.mcw.edu/contact/index.shtml).

Term:serum anti-type 2 collagen antibody level
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Accession:CMO:0002627 term browser browse the term
Definition:The amount of an immunoglobulin molecule possessing a specific amino acid sequence that binds type 2 collagen, the main fibrous protein constituent of cartilage, in a specified volume of serum, the clear liquid that separates from blood after it has clotted completely, i.e. blood plasma from which fibrinogen has been removed.
Synonyms:exact_synonym: serum anti-type II collagen antibody level



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calculated serum anti-rat type 2 collagen autoantibody titer term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Ciaa1 CIA Autoantibody QTL 1 IDA RGD PMID:11001927 RGD:61067 NCBI chr20:2,646,395...4,597,031 JBrowse link
Q Ciaa4 CIA Autoantibody QTL 4 IDA RGD PMID:11001927 RGD:61067 NCBI chr 4:126,395,976...167,139,601 JBrowse link
Q Ciaa5 CIA Autoantibody QTL 5 IDA RGD PMID:11001927 RGD:61067 NCBI chr 5:94,858,972...143,070,159 JBrowse link
calculated serum anti-type 2 collagen antibody titer term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Ciaa2 CIA Autoantibody QTL 2 IDA RGD PMID:10857786 RGD:61066 NCBI chr10:63,221,094...107,211,142 JBrowse link
Q Ciaa3 CIA Autoantibody QTL 3 IDA RGD PMID:10857786 RGD:61066 NCBI chr 9:7,954,720...22,071,169 JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  clinical measurement 2369
    immune system measurement 49
      immunoglobulin measurement 21
        blood immunoglobulin measurement 21
          serum immunoglobulin measurement 21
            serum antibody level 12
              serum anti-collagen antibody level 5
                serum anti-type 2 collagen antibody level 5
                  serum anti-bovine type 2 collagen antibody level + 0
                  serum anti-porcine type 2 collagen antibody level + 0
                  serum anti-rat type 2 collagen antibody level + 3
                  serum anti-type 2 collagen antibody titer + 5
Path 2
Term Annotations click to browse term
  clinical measurement 2369
    blood measurement 443
      blood chemistry measurement 426
        blood protein measurement 188
          blood globulin measurement 21
            blood immunoglobulin measurement 21
              blood antibody level 12
                serum antibody level 12
                  serum anti-collagen antibody level 5
                    serum anti-type 2 collagen antibody level 5
                      serum anti-bovine type 2 collagen antibody level + 0
                      serum anti-porcine type 2 collagen antibody level + 0
                      serum anti-rat type 2 collagen antibody level + 3
                      serum anti-type 2 collagen antibody titer + 5
paths to the root