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CLINICAL MEASUREMENT - ANNOTATIONS

The Clinical Measurement Ontology (CMO), Measurement Methods Ontology (MMO), and Experimental Condition Ontology (XCO) are currently being developed at the Rat Genome Database. For more information about these vocabularies please see Shimoyama et al. Three ontologies to define phenotype measurement data. Front Genet. 2012;3:87. Epub 2012 May 28 or contact us (https://rgd.mcw.edu/rgdweb/contact/contactus.html).
Term:tibia midshaft cross-sectional area
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Accession:CMO:0001717 term browser browse the term
Definition:Measurement of all or part of the cross-sectional area of the tibia measured midway between the two ends of the bone. The tibia cross-sectional area is a measurement of the extent of a plane through, that is, perpendicular to the longest axis of the tibia, the medial and larger of the two bones of the lower leg of bipeds or hindlimb of quadrupeds which articulates with the femur, fibula, and talus.
Synonyms:exact_synonym: tibia cortical bone midshaft cross-sectional area
 related_synonym: tibial midshaft cortical cross-sectional area
 xref: MA:0001361


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tibia midshaft cross-sectional area term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Bss54 Bone structure and strength QTL 54 IDA RGD PMID:19113924 RGD:2312767 NCBI chr 1:43,284,731...118,944,897 JBrowse link
Q Bss55 Bone structure and strength QTL 55 IDA RGD PMID:19113924 RGD:2312767 NCBI chr 1:43,284,731...118,944,897 JBrowse link
Q Bss61 Bone structure and strength QTL 61 IDA RGD PMID:19113924 RGD:2312767 NCBI chr10:5,387,014...50,387,014 JBrowse link
Q Bss62 Bone structure and strength QTL 62 IDA RGD PMID:19113924 RGD:2312767 NCBI chr10:5,387,014...50,387,014 JBrowse link
Q Bss72 Bone structure and strength QTL 72 IDA RGD PMID:19113924 RGD:2312767 NCBI chr 3:27,494,621...50,302,886 JBrowse link
Q Bss73 Bone structure and strength QTL 73 IDA RGD PMID:19113924 RGD:2312767 NCBI chr 3:27,494,621...50,302,886 JBrowse link
Q Bss76 Bone structure and strength QTL 76 IDA RGD PMID:19113924 RGD:2312767 NCBI chr 8:30,848,154...82,460,899 JBrowse link
Q Bss79 Bone structure and strength QTL 79 IDA RGD PMID:19113924 RGD:2312767 NCBI chr10:62,057,807...107,057,807 JBrowse link
Q Bss82 Bone structure and strength QTL 82 IDA RGD PMID:19113924 RGD:2312767 NCBI chr14:37,669,719...82,669,719 JBrowse link
tibia midshaft endosteal cross-sectional area term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Bss56 Bone structure and strength QTL 56 IDA RGD PMID:19113924 RGD:2312767 NCBI chr 1:43,284,731...118,944,897 JBrowse link
Q Bss77 Bone structure and strength QTL 77 IDA RGD PMID:19113924 RGD:2312767 NCBI chr 8:30,848,154...82,460,899 JBrowse link
Q Bss80 Bone structure and strength QTL 80 IDA RGD PMID:19113924 RGD:2312767 NCBI chr10:62,057,807...107,057,807 JBrowse link
Q Bss83 Bone structure and strength QTL 83 IDA RGD PMID:19113924 RGD:2312767 NCBI chr14:37,669,719...82,669,719 JBrowse link
tibia midshaft total cross-sectional area term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Bss59 Bone structure and strength QTL 59 IDA RGD PMID:19113924 RGD:2312767 NCBI chr 5:3,844,018...26,141,981 JBrowse link
Q Bss65 Bone structure and strength QTL 65 IDA RGD PMID:19113924 RGD:2312767 NCBI chr15:60,990,468...73,690,657 JBrowse link
Q Bss71 Bone structure and strength QTL 71 IDA RGD PMID:19113924 RGD:2312767 NCBI chr 1:118,944,747...163,944,747 JBrowse link
Q Bss85 Bone structure and strength QTL 85 IDA RGD PMID:19113924 RGD:2312767 NCBI chr18:14,951,337...59,951,337 JBrowse link
Q Bss86 Bone structure and strength QTL 86 IDA RGD PMID:20699128 RGD:4889918 NCBI chr 1:53,895,117...82,174,945 JBrowse link
Q Bss91 Bone structure and strength QTL 91 IDA RGD PMID:20699128 RGD:4889918 NCBI chr10:82,564,856...92,369,470 JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  clinical measurement 2369
    body morphological measurement 733
      skeleton morphological measurement 201
        bone morphological measurement 179
          bone area measurement 82
            bone cross-sectional area measurement 73
              tibia midshaft cross-sectional area 19
                tibia midshaft cortical cross-sectional area 0
                tibia midshaft endosteal cross-sectional area 4
                tibia midshaft total cross-sectional area 6
Path 2
Term Annotations click to browse term
  clinical measurement 2369
    musculoskeletal system measurement 297
      skeletal system measurement 235
        bone measurement 213
          bone morphological measurement 179
            bone area measurement 82
              tibia area measurement 27
                tibia midshaft cross-sectional area 19
                  tibia midshaft cortical cross-sectional area 0
                  tibia midshaft endosteal cross-sectional area 4
                  tibia midshaft total cross-sectional area 6
paths to the root