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CLINICAL MEASUREMENT - ANNOTATIONS

The Clinical Measurement Ontology (CMO), Measurement Methods Ontology (MMO), and Experimental Condition Ontology (XCO) are currently being developed at the Rat Genome Database. For more information about these vocabularies please see Shimoyama et al. Three ontologies to define phenotype measurement data. Front Genet. 2012;3:87. Epub 2012 May 28 or contact us (http://rgd.mcw.edu/contact/index.shtml).

Term:tibia morphological measurement
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Accession:CMO:0001378 term browser browse the term
Definition:Any measurement of the physical form or structure of the tibia, the major bone in the lower part of the hindlimb, which articulates with the femur, fibula, and talus.
Synonyms:xref: MA:0001361



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tibia area measurement term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Bss100 Bone structure and strength QTL 100 IDA RGD PMID:21818327 RGD:5684953 NCBI chr 8:50,095,249...82,460,899 JBrowse link
Q Bss104 Bone structure and strength QTL 104 IDA RGD PMID:21818327 RGD:5684953 NCBI chr  X:113,805,422...126,975,220 JBrowse link
Q Bss99 Bone structure and strength QTL 99 IDA RGD PMID:21818327 RGD:5684953
tibia cortical bone volume term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Bss89 Bone structure and strength QTL 89 IDA RGD PMID:20699128 RGD:4889918 NCBI chr 8:50,095,249...82,460,899 JBrowse link
Q Bss96 Bone structure and strength QTL 96 IDA RGD PMID:20699128 RGD:4889918 NCBI chr 4:56,647,776...78,882,945 JBrowse link
tibia cortical bone volume to tibia total bone volume ratio term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Bss93 Bone structure and strength QTL 93 IDA RGD PMID:20699128 RGD:4889918 NCBI chr17:27,027,949...60,463,643 JBrowse link
tibia length term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Bss51 Bone structure and strength QTL 51 IDA RGD PMID:19113924 RGD:2312767 NCBI chr 1:1...32,356,093 JBrowse link
Q Bss53 Bone structure and strength QTL 53 IDA RGD PMID:19113924 RGD:2312767 NCBI chr 1:43,284,731...118,944,897 JBrowse link
Q Bss60 Bone structure and strength QTL 60 IDA RGD PMID:19113924 RGD:2312767 NCBI chr 8:50,095,249...82,460,899 JBrowse link
Q Bss66 Bone structure and strength QTL 66 IDA RGD PMID:19113924 RGD:2312767 NCBI chr 1:11,481,312...82,174,945 JBrowse link
Q Lmblg1 Limb length QTL 1 IDA RGD PMID:15452030 RGD:1302893 NCBI chr 1:151,162,512...201,278,233 JBrowse link
Q Lmblg2 Limb length QTL 2 IDA RGD PMID:15452030 RGD:1302893 NCBI chr17:4,299,130...69,599,340 JBrowse link
Q Plsm3 Polydactyly-luxate syndrome (PLS) morphotypes QTL 3 IDA RGD PMID:8997636 RGD:632346 NCBI chr 7:1...34,000,259 JBrowse link
tibia midshaft cross-sectional area term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Bss54 Bone structure and strength QTL 54 IDA RGD PMID:19113924 RGD:2312767 NCBI chr 1:43,284,731...118,944,897 JBrowse link
Q Bss55 Bone structure and strength QTL 55 IDA RGD PMID:19113924 RGD:2312767 NCBI chr 1:43,284,731...118,944,897 JBrowse link
Q Bss61 Bone structure and strength QTL 61 IDA RGD PMID:19113924 RGD:2312767 NCBI chr10:5,387,014...50,387,014 JBrowse link
Q Bss62 Bone structure and strength QTL 62 IDA RGD PMID:19113924 RGD:2312767 NCBI chr10:5,387,014...50,387,014 JBrowse link
Q Bss72 Bone structure and strength QTL 72 IDA RGD PMID:19113924 RGD:2312767 NCBI chr 3:27,494,621...50,302,886 JBrowse link
Q Bss73 Bone structure and strength QTL 73 IDA RGD PMID:19113924 RGD:2312767 NCBI chr 3:27,494,621...50,302,886 JBrowse link
Q Bss76 Bone structure and strength QTL 76 IDA RGD PMID:19113924 RGD:2312767 NCBI chr 8:30,848,154...82,460,899 JBrowse link
Q Bss79 Bone structure and strength QTL 79 IDA RGD PMID:19113924 RGD:2312767 NCBI chr10:62,057,807...107,057,807 JBrowse link
Q Bss82 Bone structure and strength QTL 82 IDA RGD PMID:19113924 RGD:2312767 NCBI chr14:37,669,719...82,669,719 JBrowse link
tibia midshaft endosteal cross-sectional area term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Bss56 Bone structure and strength QTL 56 IDA RGD PMID:19113924 RGD:2312767 NCBI chr 1:43,284,731...118,944,897 JBrowse link
Q Bss77 Bone structure and strength QTL 77 IDA RGD PMID:19113924 RGD:2312767 NCBI chr 8:30,848,154...82,460,899 JBrowse link
Q Bss80 Bone structure and strength QTL 80 IDA RGD PMID:19113924 RGD:2312767 NCBI chr10:62,057,807...107,057,807 JBrowse link
Q Bss83 Bone structure and strength QTL 83 IDA RGD PMID:19113924 RGD:2312767 NCBI chr14:37,669,719...82,669,719 JBrowse link
tibia midshaft total cross-sectional area term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Bss59 Bone structure and strength QTL 59 IDA RGD PMID:19113924 RGD:2312767 NCBI chr 5:3,844,018...26,141,981 JBrowse link
Q Bss65 Bone structure and strength QTL 65 IDA RGD PMID:19113924 RGD:2312767 NCBI chr15:60,990,468...73,690,657 JBrowse link
Q Bss71 Bone structure and strength QTL 71 IDA RGD PMID:19113924 RGD:2312767 NCBI chr 1:118,944,747...163,944,747 JBrowse link
Q Bss85 Bone structure and strength QTL 85 IDA RGD PMID:19113924 RGD:2312767 NCBI chr18:14,951,337...59,951,337 JBrowse link
Q Bss86 Bone structure and strength QTL 86 IDA RGD PMID:20699128 RGD:4889918 NCBI chr 1:53,895,117...82,174,945 JBrowse link
Q Bss91 Bone structure and strength QTL 91 IDA RGD PMID:20699128 RGD:4889918 NCBI chr10:82,564,856...92,369,470 JBrowse link
tibia total bone volume term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Bss88 Bone structure and strength QTL 88 IDA RGD PMID:20699128 RGD:4889918
Q Bss97 Bone structure and strength QTL 97 IDA RGD PMID:20699128 RGD:4889918 NCBI chr 4:56,647,776...78,882,945 JBrowse link
tibia-fibula cortical bone endosteal cross-sectional area term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Bss87 Bone structure and strength QTL 87 IDA RGD PMID:20699128 RGD:4889918 NCBI chr 1:53,895,117...82,174,945 JBrowse link
Q Bss90 Bone structure and strength QTL 90 IDA RGD PMID:20699128 RGD:4889918 NCBI chr 9:86,369,631...92,058,970 JBrowse link
Q Bss94 Bone structure and strength QTL 94 IDA RGD PMID:20699128 RGD:4889918 NCBI chr 1:49,361,465...82,174,945 JBrowse link
tibia-fibula cortical bone total cross-sectional area term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Bss92 Bone structure and strength QTL 92 IDA RGD PMID:20699128 RGD:4889918 NCBI chr14:82,057,471...95,876,975 JBrowse link
tibia-fibula cross-sectional area term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Bss95 Bone structure and strength QTL 95 IDA RGD PMID:20699128 RGD:4889918 NCBI chr 3:1...36,847,613 JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  clinical measurement 2369
    body morphological measurement 733
      skeleton morphological measurement 201
        bone morphological measurement 179
          tibia morphological measurement 39
            tibia area measurement + 27
            tibia length + 7
            tibia midshaft morphological measurement + 19
            tibia volume measurement + 5
            tibia weight 0
Path 2
Term Annotations click to browse term
  clinical measurement 2369
    musculoskeletal system measurement 297
      skeletal system measurement 235
        skeleton morphological measurement 201
          bone morphological measurement 179
            tibia morphological measurement 39
              tibia area measurement + 27
              tibia length + 7
              tibia midshaft morphological measurement + 19
              tibia volume measurement + 5
              tibia weight 0
paths to the root