Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Behavioral & Substance Use Disorder Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
Advanced Search (OLGA)

CLINICAL MEASUREMENT - ANNOTATIONS

The Clinical Measurement Ontology (CMO), Measurement Methods Ontology (MMO), and Experimental Condition Ontology (XCO) are currently being developed at the Rat Genome Database. For more information about these vocabularies please see Shimoyama et al. Three ontologies to define phenotype measurement data. Front Genet. 2012;3:87. Epub 2012 May 28 or contact us (https://rgd.mcw.edu/rgdweb/contact/contactus.html).
Term:plasma lipid level
go back to main search page
Accession:CMO:0000544 term browser browse the term


show annotations for term's descendants           Sort by:
calculated plasma low density lipoprotein cholesterol level term browser
Symbol Object Name Evidence rsID P Value LOD Score Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Scl18 Serum cholesterol level QTL 18 IDA 3.7 RGD PMID:14739155 RGD:737694 NCBI chr 5:79,584,860...124,584,860 JBrowse link
plasma total cholesterol level term browser
Symbol Object Name Evidence rsID P Value LOD Score Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Scl14 Serum cholesterol level QTL 14 IDA 4.0E-4 5.8 RGD PMID:14739155 RGD:737694 NCBI chr 5:108,845,856...153,845,856 JBrowse link
Q Scl15 Serum cholesterol level QTL 15 IDA 0.001 4.8 RGD PMID:14739155 RGD:737694 NCBI chr 5:33,215,665...78,215,665 JBrowse link
Q Scl16 Serum cholesterol level QTL 16 IDA 3.8 RGD PMID:14739155 RGD:737694 NCBI chr 8:30,856,404...75,856,404 JBrowse link
Q Scl17 Serum cholesterol level QTL 17 IDA 3.4 RGD PMID:14739155 RGD:737694 NCBI chr 2:211,744,537...249,053,267 JBrowse link
Q Scl19 Serum cholesterol QTL 19 IDA 0.001 4.6 RGD PMID:14709677 RGD:1299960 NCBI chr 1:90,532,338...123,479,925 JBrowse link
Q Scl20 Serum cholesterol level QTL 20 IDA 1.0E-4 6.4 RGD PMID:14709677 RGD:1299960 NCBI chr 5:82,394,392...166,664,054 JBrowse link
Q Scl21 Serum cholesterol level QTL 21 IDA 0.0011 3.8 RGD PMID:14709677 RGD:1299960 NCBI chr12:7,196,730...46,669,029 JBrowse link
Q Scl33 Serum cholesterol QTL 33 IDA 0.0125 2.0 RGD PMID:14709677 RGD:1299960
Q Scl34 Serum cholesterol QTL 34 IDA 0.0033 2.5 RGD PMID:14709677 RGD:1299960 NCBI chr 1:180,359,209...218,108,781 JBrowse link
Q Scl35 Serum cholesterol QTL 35 IDA 0.0073 2.6 RGD PMID:14709677 RGD:1299960 NCBI chr 5:28,515,489...73,515,489 JBrowse link
Q Scl36 Serum cholesterol QTL 36 IDA 0.0125 2.0 RGD PMID:14709677 RGD:1299960 NCBI chr 1:53,863,041...90,532,583 JBrowse link
Q Scl54 Serum cholesterol level QTL 54 IDA 2.93 RGD PMID:17620956 RGD:2290428 NCBI chr 5:31,663,789...131,345,958 JBrowse link
Q Scl55 Serum cholesterol level QTL 55 IDA 2.83 RGD PMID:17620956 RGD:2290428 NCBI chr 2:26,917,817...136,917,119 JBrowse link
Q Scl56 Serum cholesterol level QTL 56 IDA 2.26 RGD PMID:17620956 RGD:2290428 NCBI chr 3:1...91,609,953 JBrowse link
Q Scl57 Serum cholesterol level QTL 57 IDA 4.15 RGD PMID:17620956 RGD:2290428 NCBI chr 9:36,962,359...95,410,867 JBrowse link
Q Scl58 Serum cholesterol level QTL 58 IDA 3.48 RGD PMID:17620956 RGD:2290428 NCBI chr11:12,831,046...25,121,472 JBrowse link
Q Scl66 Serum cholesterol level QTL 66 IDA 4.1 RGD PMID:19584172 RGD:2316856 NCBI chr 8:30,848,259...105,647,037 JBrowse link
Q Scl67 Serum cholesterol level QTL 67 IDA 1.16E-5 4.27 RGD PMID:11071303 RGD:619669
Term paths to the root
Path 1
Term Annotations click to browse term
  clinical measurement 2369
    blood measurement 443
      blood chemistry measurement 426
        blood lipid measurement 109
          plasma lipid level 19
            plasma eicosanoid level + 0
            plasma phospholipid level + 0
            plasma sterol level + 19
paths to the root