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CLINICAL MEASUREMENT - ANNOTATIONS

The Clinical Measurement Ontology (CMO), Measurement Methods Ontology (MMO), and Experimental Condition Ontology (XCO) are currently being developed at the Rat Genome Database. For more information about these vocabularies please see Shimoyama et al. Three ontologies to define phenotype measurement data. Front Genet. 2012;3:87. Epub 2012 May 28 or contact us (http://rgd.mcw.edu/contact/index.shtml).

Term:tumor measurement
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Accession:CMO:0000341 term browser browse the term
Definition:Measurement of an abnormal growth of tissue resulting from uncontrolled, progressive multiplication of cells and serving no physiological function.


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benign colorectal tumor number term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Colcr5 Colorectal carcinoma resistance QTL 5 IDA RGD PMID:17510081 RGD:1625309 NCBI chr 6:127,286,494...144,745,573 JBrowse link
Q Colcr9 Colorectal carcinoma resistance QTL 9 IDA RGD PMID:17510081 RGD:1625309 NCBI chr20:2,999,707...47,999,707 JBrowse link
benign colorectal tumor surface area measurement term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Colcr1 Colorectal carcinoma resistance QTL 1 IDA RGD PMID:17510081 RGD:1625309 NCBI chr 4:1...26,654,881 JBrowse link
Q Colcr6 Colorectal carcinoma resistance QTL 6 IDA RGD PMID:17510081 RGD:1625309 NCBI chr15:81,255,292...109,133,904 JBrowse link
Q Colcr7 Colorectal carcinoma resistance QTL 7 IDA RGD PMID:17510081 RGD:1625309 NCBI chr17:519,770...23,422,380 JBrowse link
Q Colcs1 Colorectal carcinoma susceptibility QTL 1 IDA RGD PMID:17510081 RGD:1625309 NCBI chr 5:128,687,766...173,687,766 JBrowse link
colorectal tumor number term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Colcr2 Colorectal carcinoma resistance QTL 2 IDA RGD PMID:17510081 RGD:1625309 NCBI chr15:2,327,877...26,288,802 JBrowse link
mammary tumor growth rate term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Mamtr7 Mammary tumor resistance QTL 7 IDA RGD PMID:19052818 RGD:2302423 NCBI chr10:9,841,807...108,540,162 JBrowse link
Q Mamtr8 Mammary tumor resistance QTL 8 IDA RGD PMID:19052818 RGD:2302423 NCBI chr18:32,670,352...87,080,053 JBrowse link
Q Mcs20 Mammary carcinoma susceptibility QTL 20 IDA RGD PMID:16596452 RGD:1599317 NCBI chr 9:15,554,901...47,249,201 JBrowse link
Q Mcs21 Mammary carcinoma susceptibility QTL 21 IDA RGD PMID:16596452 RGD:1599317 NCBI chr10:30,021,354...54,057,745 JBrowse link
Q Mcs22 Mammary carcinoma susceptibility QTL 22 IDA RGD PMID:16596452 RGD:1599317 NCBI chr18:54,108,375...68,819,562 JBrowse link
mammary tumor incidence/prevalence measurement term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Mcs31 Mammary carcinoma susceptibility QTL 31 IDA RGD PMID:23967281 RGD:7794780 NCBI chr 9:90,024,661...119,983,851 JBrowse link
Q Mcs32 Mammary carcinoma susceptibility QTL 32 IDA RGD PMID:23967281 RGD:7794780 NCBI chr 1:122,614,824...262,664,716 JBrowse link
Q Mcs33 Mammary carcinoma susceptibility QTL 33 IDA RGD PMID:23967281 RGD:7794780 NCBI chr 5:136,640,731...173,707,219 JBrowse link
Q Mcs34 Mammary carcinoma susceptibility QTL 34 IDA RGD PMID:23967281 RGD:7794780
mammary tumor number term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Emca11 Estrogen-induced mammary cancer QTL 11 IDA RGD PMID:23151807 RGD:7364727 NCBI chr 5:103,580,245...117,037,276 JBrowse link
Q Emca12 Estrogen-induced mammary cancer QTL 12 IDA RGD PMID:23151807 RGD:7364727 NCBI chr 5:129,038,716...139,099,229 JBrowse link
Q Emca13 Estrogen-induced mammary cancer QTL 13 IDA RGD PMID:23151807 RGD:7364727 NCBI chr 5:9,514,842...103,580,403 JBrowse link
Q Emca6 Estrogen-induced mammary cancer QTL 6 IDA RGD PMID:16885383 RGD:1642522 NCBI chr 4:43,414,605...155,469,929 JBrowse link
Q Emca7 Estrogen-induced mammary cancer QTL 7 IDA RGD PMID:16885383 RGD:1642522 NCBI chr 6:2,537,030...111,715,717 JBrowse link
Q Emca8 Estrogen-induced mammary cancer QTL 8 IDA RGD PMID:16885383 RGD:1642522 NCBI chr 5:51,418,671...147,487,820 JBrowse link
Q Mamtr1 Mammary tumor resistance QTL 1 IDA RGD PMID:12844486 RGD:631852 NCBI chr 5:12,651,967...117,554,267 JBrowse link
Q Mamtr2 Mammary tumor resistance QTL 2 IDA RGD PMID:14522903 RGD:724790 NCBI chr 2:5,417,336...10,246,458 JBrowse link
Q Mamtr3 Mammary tumor resistance QTL 3 IDA RGD PMID:14522903 RGD:724790 NCBI chr 2:31,224,612...43,643,900 JBrowse link
Q Mamtr4 Mammary tumor resistance QTL 4 IDA RGD PMID:14522903 RGD:724790 NCBI chr 2:14,237,830...59,237,830 JBrowse link
Q Mamtr5 Mammary tumor resistance QTL 5 IDA RGD PMID:17230524 RGD:1599390 NCBI chr 5:18,847,913...63,847,913 JBrowse link
Q Mamtr6 Mammary tumor resistance QTL 6 IDA RGD PMID:17230524 RGD:1599390 NCBI chr18:20,285,758...87,080,053 JBrowse link
Q Mcs1 Mammary carcinoma susceptibility QTL 1 IDA RGD PMID:8168109 RGD:61080 NCBI chr 2:5,417,336...21,657,459 JBrowse link
Q Mcs12 Mammary carcinoma susceptibility QTL 12 IDA RGD PMID:16266982 RGD:1559294 NCBI chr 5:60,225,095...61,370,302 JBrowse link
Q Mcs13 Mammary carcinoma susceptibility QTL 13 IDA RGD PMID:16266982 RGD:1559294 NCBI chr 5:68,395,096...71,941,113 JBrowse link
Q Mcs14 Mammary carcinoma susceptibility QTL 14 IDA RGD PMID:16266982 RGD:1559294 NCBI chr 5:78,777,540...83,269,259 JBrowse link
Q Mcs15 Mammary carcinoma susceptibility QTL 15 IDA RGD PMID:16568087 RGD:1581951 NCBI chr10:88,544,136...107,545,372 JBrowse link
Q Mcs16 Mammary carcinoma susceptibility QTL 16 IDA RGD PMID:16596452 RGD:1599317 NCBI chr 1:1,868,045...43,724,576 JBrowse link
Q Mcs17 Mammary carcinoma susceptibility QTL 17 IDA RGD PMID:16596452 RGD:1599317 NCBI chr 1:215,684,498...260,684,498 JBrowse link
Q Mcs18 Mammary carcinoma susceptibility QTL 18 IDA RGD PMID:16596452 RGD:1599317 NCBI chr 2:5,417,336...42,777,046 JBrowse link
Q Mcs19 Mammary carcinoma susceptibility QTL 19 IDA RGD PMID:16596452 RGD:1599317 NCBI chr 5:103,265,614...107,119,704 JBrowse link
Q Mcs2 Mammary carcinoma susceptibility QTL 2 IDA RGD PMID:9584103 RGD:61081 NCBI chr 7:24,738,680...40,433,335 JBrowse link
Q Mcs23 Mammary carcinoma susceptibility QTL 23 IDA RGD PMID:17404222 RGD:1601189
Q Mcs24 Mammary carcinoma susceptibility QTL 24 IDA RGD PMID:17404222 RGD:1601189 NCBI chr 5:68,838,385...113,838,385 JBrowse link
Q Mcs28 Mammary carcinoma susceptibility QTL 28 IDA RGD PMID:21205740 RGD:5684388 NCBI chr 5:80,154,593...80,451,339 JBrowse link
Q Mcs29 Mammary carcinoma susceptibility QTL 29 IDA RGD PMID:21205740 RGD:5684388 NCBI chr 5:80,229,223...80,401,274 JBrowse link
Q Mcs3 Mammary carcinoma susceptibility QTL 3 IDA RGD PMID:9584103 RGD:61081 NCBI chr 1:108,057,233...167,517,487 JBrowse link
Q Mcs30 Mammary carcinoma susceptibility QTL 30 IDA RGD PMID:24023717 RGD:7327193 NCBI chr12:1,258,139...10,257,059 JBrowse link
Q Mcs4 Mammary carcinoma susceptibility QTL 4 IDA RGD PMID:9584103 RGD:61081 NCBI chr 8:20,717,592...65,717,592 JBrowse link
Q Mcs5 Mammary carcinoma susceptibility QTL 5 IDA RGD PMID:11139513 RGD:62417 NCBI chr 5:56,991,667...137,729,065 JBrowse link
Q Mcs6 Mammary carcinoma susceptibility QTL 6 IDA RGD PMID:11139513 RGD:62417 NCBI chr 7:33,044,449...71,352,127 JBrowse link
Q Mcs7 Mammary carcinoma susceptibility QTL 7 IDA RGD PMID:11139513 RGD:62417 NCBI chr10:75,544,754...112,626,471 JBrowse link
Q Mcs8 Mammary carcinoma susceptibility QTL 8 IDA RGD PMID:11139513 RGD:62417 NCBI chr14:4,833,233...26,466,248 JBrowse link
Q Mcsm1 Mammary carcinoma susceptibility modifier QTL 1 IDA RGD PMID:11139513 RGD:62417 NCBI chr 6:62,263,348...107,263,348 JBrowse link
number of squamous cell tumors of the tongue with diameter greater than 3 mm term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Tcas10 Tongue tumor susceptibility QTL 10 IDA RGD PMID:11429048 RGD:634723 NCBI chr10:33,179,030...78,179,030 JBrowse link
Q Tcas11 Tongue tumor susceptibility QTL 11 IDA RGD PMID:16527513 RGD:1578522 NCBI chr 5:47,745,646...167,946,134 JBrowse link
Q Tcas2 Tongue tumor susceptibility QTL 2 IDA RGD PMID:11429048 RGD:634723 NCBI chr 1:210,019,247...217,054,418 JBrowse link
Q Tcas3 Tongue tumor susceptibility QTL 3 IDA RGD PMID:11429048 RGD:634723 NCBI chr 4:7,342,404...92,484,039 JBrowse link
Q Tcas4 Tongue tumor susceptibility QTL 4 IDA RGD PMID:11429048 RGD:634723 NCBI chr14:19,191,541...43,957,628 JBrowse link
Q Tcas5 Tongue tumor susceptibility QTL 5 IDA RGD PMID:11429048 RGD:634723 NCBI chr19:5,007,571...43,907,843 JBrowse link
Q Tcas6 Tongue tumor susceptibility QTL 6 IDA RGD PMID:11429048 RGD:634723 NCBI chr 1:95,304,961...156,446,783 JBrowse link
Q Tcas8 Tongue tumor susceptibility QTL 8 IDA RGD PMID:11429048 RGD:634723
Q Tcas9 Tongue tumor susceptibility QTL 9 IDA RGD PMID:11429048 RGD:634723 NCBI chr 6:1...25,048,718 JBrowse link
number of squamous cell tumors of the tongue with diameter greater than 5 mm term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Tcat1 Tongue tumor resistance QTL 1 IDA RGD PMID:9563479 RGD:61091 NCBI chr 1:111,446,783...156,446,783 JBrowse link
percentage of study population developing mammary tumors during a period of time term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Emca4 Estrogen-induced mammary cancer QTL 4 IDA RGD PMID:16885383 RGD:1642522 NCBI chr 7:69,399,586...111,043,530 JBrowse link
Q Emca5 Estrogen-induced mammary cancer QTL 5 IDA RGD PMID:16885383 RGD:1642522 NCBI chr 3:45,406,058...177,699,992 JBrowse link
percentage of study population developing T-cell lymphomas during a period of time term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Tls2 T-lymphoma susceptibility QTL 2 IDA RGD PMID:10360666 RGD:619600 NCBI chr 7:88,365,265...119,318,087 JBrowse link
Q Tls3 T-lymphoma susceptibility QTL 3 IDA RGD PMID:10360666 RGD:619600 NCBI chr10:53,625,815...98,939,209 JBrowse link
percentage of study population developing testis tumors during a period of time term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Tescar1 Testicular tumor resistance QTL 1 IDA RGD PMID:15805257 RGD:1358944 NCBI chr11:325,031...69,342,559 JBrowse link
percentage of study population developing trigeminal nerve neurilemmomas during a period of time term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Schws1 Schwannoma susceptibility QTL 1 IDA RGD PMID:16003739 RGD:1559300 NCBI chr10:41,260,363...106,105,607 JBrowse link
Q Schws2 Schwannoma susceptibility QTL 2 IDA RGD PMID:16003739 RGD:1559300
Q Schws3 Schwannoma susceptibility QTL 3 IDA RGD PMID:16003739 RGD:1559300 NCBI chr 3:125,848,628...170,848,628 JBrowse link
Q Schws4 Schwannoma susceptibility QTL 4 IDA RGD PMID:16003739 RGD:1559300 NCBI chr 6:87,418,448...111,129,520 JBrowse link
Q Schws7 Schwannoma susceptibility QTL 7 IDA RGD PMID:16003739 RGD:1559300 NCBI chr10:4,835,638...20,170,031 JBrowse link
Q Schws8 Schwannoma susceptibility QTL 8 IDA RGD PMID:25303613 RGD:11566050 NCBI chr 6:99,273,921...144,273,921 JBrowse link
Q Schws9 Schwannoma susceptibility QTL 9 IDA RGD PMID:25303613 RGD:11566050 NCBI chr 6:66,129,520...111,129,520 JBrowse link
poorly differentiated malignant colorectal tumor number term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Colcr2 Colorectal carcinoma resistance QTL 2 IDA RGD PMID:17510081 RGD:1625309 NCBI chr15:2,327,877...26,288,802 JBrowse link
Q Colcr3 Colorectal carcinoma resistance QTL 3 IDA RGD PMID:17510081 RGD:1625309 NCBI chr18:2,477,096...23,184,414 JBrowse link
Q Colcr8 Colorectal carcinoma resistance QTL 8 IDA RGD PMID:17510081 RGD:1625309 NCBI chr18:23,184,227...53,861,431 JBrowse link
poorly differentiated malignant colorectal tumor surface area measurement term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Colcr3 Colorectal carcinoma resistance QTL 3 IDA RGD PMID:17510081 RGD:1625309 NCBI chr18:2,477,096...23,184,414 JBrowse link
post-insult time to mammary tumor formation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Emca1 Estrogen-induced mammary cancer QTL 1 IDA RGD PMID:15611180 RGD:1358124 NCBI chr 5:102,945,579...154,732,228 JBrowse link
Q Emca10 Estrogen-induced mammary cancer QTL 10 IDA RGD PMID:18420736 RGD:2292503 NCBI chr 6:1,120,393...46,120,393 JBrowse link
Q Emca2 Estrogen-induced mammary cancer QTL 2 IDA RGD PMID:15611180 RGD:1358124 NCBI chr18:19,031,030...68,436,105 JBrowse link
Q Mcs26 Mammary carcinoma susceptibility QTL 26 IDA RGD PMID:20737482 RGD:4143380 NCBI chr 6:111,134,524...138,065,254 JBrowse link
Q Mcs27 Mammary carcinoma susceptibility QTL 27 IDA RGD PMID:20737482 RGD:4143380 NCBI chr13:48,776,655...53,264,877 JBrowse link
post-insult time to onset of T-cell lymphoma term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Tls1 T-lymphoma susceptibility QTL 1 IDA RGD PMID:10360666 RGD:619600 NCBI chr 5:93,273,130...138,273,130 JBrowse link
post-insult time to trigeminal nerve neurilemmoma formation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Schws5 Schwannoma susceptibility QTL 5 IDA RGD PMID:16003739 RGD:1559300
squamous cell carcinoma of the head and neck tumor number term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Tcas7 Tongue tumor susceptibility QTL 7 IDA RGD PMID:15876484 RGD:1358147 NCBI chr19:24,455,726...43,907,843 JBrowse link
squamous cell carcinoma of the tongue maximum tumor diameter term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Tcas1 Tongue tumor susceptibility QTL 1 IDA RGD PMID:9563479 RGD:61091 NCBI chr19:1,957,707...46,957,707 JBrowse link
stomach tumor depth of invasion term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Gcr3 Gastric cancer resistance QTL 3 IDA RGD PMID:10706129 RGD:69698 NCBI chr16:19,398,187...70,590,230 JBrowse link
stomach tumor diameter term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Gcr3 Gastric cancer resistance QTL 3 IDA RGD PMID:10706129 RGD:69698 NCBI chr16:19,398,187...70,590,230 JBrowse link
stomach tumor susceptibility score term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Gcr1 Gastric cancer resistance QTL 1 IDA RGD PMID:10706129 RGD:69698 NCBI chr 4:119,705,414...146,087,100 JBrowse link
Q Gcr2 Gastric cancer resistance QTL 2 IDA RGD PMID:10706129 RGD:69698 NCBI chr 3:3,285,929...28,136,884 JBrowse link
Q Gcs1 Gastric cancer susceptibility QTL1 IDA RGD PMID:10706129 RGD:69698 NCBI chr15:83,947,714...111,246,239 JBrowse link
well differentiated malignant colorectal tumor surface area measurement term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Colcr4 Colorectal carcinoma resistance QTL4 IDA RGD PMID:17510081 RGD:1625309 NCBI chr 6:21,515,302...65,784,818 JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  clinical measurement 2369
    tumor measurement 88
      colorectal tumor measurement + 10
      endometrial tumor measurement + 0
      head and neck tumor measurement + 12
      liver tumor measurement + 0
      lung tumor measurement + 0
      lymphoma measurement + 3
      mammary tumor measurement + 50
      nervous system tumor measurement + 8
      pituitary tumor measurement + 0
      prostate tumor measurement + 0
      stomach tumor measurement + 4
      subcutaneous tumor measurement + 0
      testis tumor measurement + 1
      tongue tumor measurement + 11
      tumor incidence/prevalence measurement + 16
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.