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CLINICAL MEASUREMENT - ANNOTATIONS

The Clinical Measurement Ontology (CMO), Measurement Methods Ontology (MMO), and Experimental Condition Ontology (XCO) are currently being developed at the Rat Genome Database. For more information about these vocabularies please see Shimoyama et al. Three ontologies to define phenotype measurement data. Front Genet. 2012;3:87. Epub 2012 May 28 or contact us (http://rgd.mcw.edu/contact/index.shtml).

Term:cell measurement
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Accession:CMO:0000227 term browser browse the term
Definition:Any quantification of a morphological or physiological parameter of one or more cells. A cell is a membrane-enclosed protoplasmic mass constituting the smallest structural unit of an organism that is capable of independent functioning.


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absolute change in adipocyte free fatty acid secretion per unit volume term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Gluco5 Glucose level QTL 5 IDA RGD PMID:9171835 RGD:61078 NCBI chr 4:1...29,778,604 JBrowse link
absolute change in adipocyte glucose uptake term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Gluco11 Glucose level QTL 11 IDA RGD PMID:15752738 RGD:1357415 NCBI chr 4:86,438,317...168,047,091 JBrowse link
Q Gluco16 Glucose level QTL 16 IDA RGD PMID:9171835 RGD:61078 NCBI chr 4:1...26,803,291 JBrowse link
Q Gluco3 Glucose level QTL 3 IDA RGD PMID:9171835 RGD:61078
adipocyte maximal glucose uptake term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Gluco12 Glucose level QTL12 IDA RGD PMID:15752738 RGD:1357415 NCBI chr 4:3,044,114...26,753,655 JBrowse link
adipocyte maximal glucose uptake to basal glucose uptake ratio term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Gluco17 Glucose level QTL 17 IDA RGD PMID:9171835 RGD:61078
Q Gluco4 Glucose level QTL 4 IDA RGD PMID:9171835 RGD:61078 NCBI chr 4:1...29,778,604 JBrowse link
blood CD45RChigh CD8 T cell count to CD45RClow CD8 T cell count ratio term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Cdexp1 CD45RC expression in CD8 T cells QTL 1 IDA RGD PMID:15322174 RGD:1302824 NCBI chr 9:10,869,391...15,509,311 JBrowse link
Q Cdexp2 CD45RC expression in CD8 T cells QTL 2 IDA RGD PMID:15322174 RGD:1302824 NCBI chr20:4,855,468...10,800,530 JBrowse link
blood eosinophil count term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Leukc1 Leukocyte quantity QTL 1 IDA RGD PMID:16151696 RGD:5135221 NCBI chr19:48,830,712...60,220,581 JBrowse link
Q Leukc2 Leukocyte quantity QTL 2 IDA RGD PMID:16151696 RGD:5135221 NCBI chr 2:121,750,419...155,965,721 JBrowse link
Q Leukc3 Leukocyte quantity QTL 3 IDA RGD PMID:17090969 RGD:5135222 NCBI chr 1:238,220,189...244,401,301 JBrowse link
blood T lymphocyte count term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Neuinf1 Neuroinflammation QTL 1 IDA RGD PMID:14586010 RGD:1358788 NCBI chr 5:161,084,664...173,707,219 JBrowse link
IFNG-secreting splenocyte count term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Ean2 Experimental allergic neuritis QTL 2 IDA RGD PMID:19299744 RGD:2306769 NCBI chr 4:84,475,257...97,479,149 JBrowse link
Q Ean4 Experimental allergic neuritis QTL 4 IDA RGD PMID:19299744 RGD:2306769 NCBI chr10:86,977,861...97,308,569 JBrowse link
Q Ean5 Experimental allergic neuritis QTL 5 IDA RGD PMID:19299744 RGD:2306769 NCBI chr10:75,045,391...97,308,358 JBrowse link
logarithm of the ratio of the lesioned side motor neuron count to contralateral side motor neuron count term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Neudeg1 Neurodegradation QTL 1 IDA RGD PMID:14586010 RGD:1358788 NCBI chr 8:32,888,352...101,374,135 JBrowse link
lymph node-specific lymphocyte tracer radioactivity level to kidney-specific lymphocyte tracer radioactivity level ratio term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Nka1 Natural killer alloreactivity QTL 1 IDA RGD PMID:8642329 RGD:61085
mononuclear cell count term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Neudeg2 Neurodegradation QTL 2 IDA RGD PMID:14586010 RGD:1358788 NCBI chr 5:24,956,212...44,747,071 JBrowse link
total white blood cell count term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Wbc1 White blood cell count QTL 1 IDA RGD PMID:14532335 RGD:727992 NCBI chr 5:130,531,300...145,726,262 JBrowse link
Q Wbc2 White blood cell count QTL 2 IDA RGD PMID:11721057 RGD:70849 NCBI chr12:27,285,473...36,161,779 JBrowse link
white blood cell count term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Wbc3 White blood cell count QTL 3 IDA RGD PMID:19526527 RGD:2316974 NCBI chr 5:111,278,451...156,278,451 JBrowse link
Q Wbc4 White blood cell count QTL 4 IDA RGD PMID:19526527 RGD:2316974 NCBI chr 7:1...38,119,654 JBrowse link
Q Wbc5 White blood cell count QTL 5 IDA RGD PMID:19526527 RGD:2316974 NCBI chr 8:11,448,251...56,448,251 JBrowse link

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.