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CLINICAL MEASUREMENT - ANNOTATIONS

The Clinical Measurement Ontology (CMO), Measurement Methods Ontology (MMO), and Experimental Condition Ontology (XCO) are currently being developed at the Rat Genome Database. For more information about these vocabularies please see Shimoyama et al. Three ontologies to define phenotype measurement data. Front Genet. 2012;3:87. Epub 2012 May 28 or contact us (http://rgd.mcw.edu/contact/index.shtml).

Term:body fat morphological measurement
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Accession:CMO:0000089 term browser browse the term
Definition:Measurement of adipose tissue in entire body or region of body of an organism.


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abdominal fat pad weight term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Bw116 Body weight QTL 116 IDA RGD PMID:11071303 RGD:619669 NCBI chr 1:244,401,175...282,365,384 JBrowse link
Q Bw118 Body weight QTL 118 IDA RGD PMID:10373320 RGD:619678 NCBI chr 6:36,260,288...60,606,186 JBrowse link
Q Bw121 Body weight QTL 121 IDA RGD PMID:10373320 RGD:619678 NCBI chr11:22,043,149...44,444,112 JBrowse link
abdominal fat pad weight to body weight ratio term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Abfw1 Abdominal fat weight QTL 1 IDA RGD PMID:25003539 RGD:8694157 NCBI chr 2:197,253,963...242,253,963 JBrowse link
Q Abfw2 Abdominal fat weight QTL 2 IDA RGD PMID:25003539 RGD:8694157 NCBI chr 3:29,682,732...74,682,732 JBrowse link
Q Abfw3 Abdominal fat weight QTL 3 IDA RGD PMID:25003539 RGD:8694157 NCBI chr 5:116,767,924...161,767,924 JBrowse link
Q Abfw4 Abdominal fat weight QTL 4 IDA RGD PMID:25003539 RGD:8694157 NCBI chr 8:78,805,083...123,805,083 JBrowse link
Q Abfw5 Abdominal fat weight QTL 5 IDA RGD PMID:25003539 RGD:8694157
Q Abfw6 Abdominal fat weight QTL 6 IDA RGD PMID:25003539 RGD:8694157 NCBI chr15:1...37,708,474 JBrowse link
Q Abfw7 Abdominal fat weight QTL 7 IDA RGD PMID:25003539 RGD:8694157 NCBI chr16:57,816,357...90,668,790 JBrowse link
Q Abfw8 Abdominal fat weight QTL 8 IDA RGD PMID:25003539 RGD:8694157 NCBI chr18:49,130,920...88,201,929 JBrowse link
Q Bw117 Body weight QTL 117 IDA RGD PMID:10373320 RGD:619678 NCBI chr 3:40,523,593...54,745,780 JBrowse link
Q Bw119 Body weight QTL 119 IDA RGD PMID:10373320 RGD:619678 NCBI chr 7:34,147,033...34,147,172 JBrowse link
abdominal subcutaneous fat pad weight term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Scfw1 Subcutaneous fat weight QTL 1 IDA RGD PMID:25003539 RGD:8694157 NCBI chr 2:197,253,963...242,253,963 JBrowse link
Q Scfw2 Subcutaneous fat weight QTL 2 IDA RGD PMID:25003539 RGD:8694157 NCBI chr 4:1...28,352,196 JBrowse link
Q Scfw3 Subcutaneous fat weight QTL 3 IDA RGD PMID:25003539 RGD:8694157 NCBI chr 6:1...42,388,212 JBrowse link
Q Scfw4 Subcutaneous fat weight QTL 4 IDA RGD PMID:25003539 RGD:8694157
Q Scfw5 Subcutaneous fat weight QTL 5 IDA RGD PMID:25003539 RGD:8694157 NCBI chr 9:1...40,383,872 JBrowse link
Q Scfw6 Subcutaneous fat weight QTL 6 IDA RGD PMID:25003539 RGD:8694157
adipose tissue molecular composition measurement term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Bw175 Body weight QTL 175 IDA RGD PMID:25296178 RGD:10402111 NCBI chr 8:81,413,898...91,140,553 JBrowse link
epididymal fat pad weight to body weight ratio term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Bw77 Body weight QTL 77 IDA RGD PMID:15728334 RGD:1580752 NCBI chr 3:54,630,948...66,711,785 JBrowse link
Q Bw78 Body weight QTL 78 IDA RGD PMID:15728334 RGD:1580752 NCBI chr 5:123,852,489...133,313,852 JBrowse link
Q Bw79 Body weight QTL 79 IDA RGD PMID:15728334 RGD:1580752 NCBI chr15:33,219,101...89,640,841 JBrowse link
Q Epfw1 Epididymal fat weight QTL 1 IDA RGD PMID:15728334 RGD:1580752 NCBI chr 3:54,630,948...119,830,094 JBrowse link
Q Epfw10 Epididymal fat weight QTL 10 IDA RGD PMID:25003539 RGD:8694157 NCBI chr11:25,720,038...70,720,038 JBrowse link
Q Epfw11 Epididymal fat weight QTL 11 IDA RGD PMID:25003539 RGD:8694157 NCBI chr14:60,980,905...105,980,905 JBrowse link
Q Epfw12 Epididymal fat weight QTL 12 IDA RGD PMID:25003539 RGD:8694157 NCBI chr18:49,130,920...88,201,929 JBrowse link
Q Epfw2 Epididymal fat weight QTL 2 IDA RGD PMID:15728334 RGD:1580752 NCBI chr 8:35,925,594...80,925,594 JBrowse link
Q Epfw3 Epididymal fat weight QTL 3 IDA RGD PMID:15728334 RGD:1580752 NCBI chr15:33,219,101...89,640,841 JBrowse link
Q Epfw4 Epididymal fat weight QTL 4 IDA RGD PMID:15728334 RGD:1580752 NCBI chr17:9,730,263...21,491,085 JBrowse link
Q Epfw5 Epididymal fat weight QTL 5 IDA RGD PMID:24099777 RGD:8552892 NCBI chr 1:210,652,654...255,652,654 JBrowse link
Q Epfw6 Epididymal fat weight QTL 6 IDA RGD PMID:25003539 RGD:8694157 NCBI chr 2:240,679,103...266,435,125 JBrowse link
Q Epfw7 Epididymal fat weight QTL 7 IDA RGD PMID:25003539 RGD:8694157 NCBI chr 5:51,804,426...96,804,426 JBrowse link
Q Epfw8 Epididymal fat weight QTL 8 IDA RGD PMID:25003539 RGD:8694157
Q Epfw9 Epididymal fat weight QTL 9 IDA RGD PMID:25003539 RGD:8694157 NCBI chr10:46,848,346...91,848,346 JBrowse link
inguinal fat pad weight to body weight ratio term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Bw62 Body weight QTL62 IDA RGD PMID:11374884 RGD:1357168 NCBI chr 1:23,406,428...68,406,428 JBrowse link
Q Bw94 Body weight QTL 94 IDA RGD PMID:19584880 RGD:2312642 NCBI chr 3:103,141,814...176,418,101 JBrowse link
Q Bw95 Body weight QTL 95 IDA RGD PMID:19584880 RGD:2312642 NCBI chr16:1,550,187...63,210,301 JBrowse link
intramuscular fat area term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Bw61 Body weight QTL61 IDA RGD PMID:11853145 RGD:619672 NCBI chr 1:193,220,385...238,220,385 JBrowse link
mesenteric fat pad weight as a percentage of body weight term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Bw1 Body weight QTL1 IDA RGD PMID:11087657 RGD:619690 NCBI chr 2:43,149,788...85,642,672 JBrowse link
Q Bw3 Body weight QTL3 IDA RGD PMID:11087657 RGD:619690 NCBI chr 8:74,917,593...121,080,545 JBrowse link
retroperitoneal fat pad weight term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Bw125 Body weight QTL 125 IEP RGD PMID:20159938 RGD:7365117 NCBI chr10:67,880,046...112,626,471 JBrowse link
retroperitoneal fat pad weight to body weight ratio term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Bw166 Body weight QTL 166 IDA RGD PMID:25003539 RGD:8694157 NCBI chr 2:197,253,963...242,253,963 JBrowse link
Q Bw167 Body weight QTL 167 IDA RGD PMID:25003539 RGD:8694157 NCBI chr 3:97,009,185...142,009,185 JBrowse link
Q Bw168 Body weight QTL 168 IDA RGD PMID:25003539 RGD:8694157 NCBI chr 4:39,208,247...84,208,247 JBrowse link
Q Bw169 Body weight QTL 169 IDA RGD PMID:25003539 RGD:8694157 NCBI chr 5:116,767,924...161,767,924 JBrowse link
Q Bw170 Body weight QTL 170 IDA RGD PMID:25003539 RGD:8694157 NCBI chr 8:78,805,083...123,805,083 JBrowse link
Q Bw171 Body weight QTL 171 IDA RGD PMID:25003539 RGD:8694157
Q Bw172 Body weight QTL 172 IDA RGD PMID:25003539 RGD:8694157 NCBI chr16:27,519,980...72,519,980 JBrowse link
Q Bw2 Body weight QTL2 IDA RGD PMID:11087657 RGD:619690 NCBI chr 4:6,467,693...43,414,792 JBrowse link
Q Bw4 Body weight QTL4 IDA RGD PMID:11087657 RGD:619690 NCBI chr 9:2,880,977...47,880,977 JBrowse link
Q Bw5 Body weight QTL5 IDA RGD PMID:11087657 RGD:619690 NCBI chr14:12,680,613...32,593,926 JBrowse link
Q Bw60 Body weight QTL60 IDA RGD PMID:11087657 RGD:619690 NCBI chr14:85,307,663...106,641,756 JBrowse link

Term paths to the root
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Term Annotations click to browse term
  clinical measurement 2369
    body morphological measurement 763
      body fat morphological measurement 53
        adipose tissue molecular composition measurement + 1
        body density 0
        body fat volume + 0
        body region fat morphological measurement + 51
        calculated body fat morphological measurement + 41
        intramuscular fat morphological measurement + 1
        total body fat weight + 0
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.