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CHEBI ONTOLOGY - ANNOTATIONS

The Chemical Entities of Biological Interest (ChEBI) ontology is downloaded weekly from EMBL-EBI at http://www.ebi.ac.uk/chebi/. The data is made available under the Creative Commons License (CC BY 3.0, http://creativecommons.org/licenses/by/3.0/). For more information see: Degtyarenko et al. (2008) ChEBI: a database and ontology for chemical entities of biological interest. Nucleic Acids Res. 36, D344–D350.

Term:dimethylindole red
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Accession:CHEBI:72811 term browser browse the term
Definition:A fluorogenic cyanine dye in which N-(3-sulfopropyl)quinolinium is linked to a 1,3,3-trimethyldihydroindole via a propan-1-yl-3-ylidene chain to form a conjugated system.
Synonyms:exact_synonym: 3-{4-[(1E,3E)-3-(1,3,3-trimethyl-1,3-dihydro-2H-indol-2-ylidene)prop-1-en-1-yl]quinolinium-1-yl}propane-1-sulfonate
 related_synonym: 1-(3-sulfopropyl)-4-[(1E,3E)-3-(1,3,3-trimethyl-1,3-dihydro-2H-indol-2-ylidene)prop-1-en-1-yl]quinolinium;   DIR;   Formula=C26H28N2O3S;   InChI=1S/C26H28N2O3S/c1-26(2)22-12-5-7-14-24(22)27(3)25(26)15-8-10-20-16-18-28(17-9-19-32(29,30)31)23-13-6-4-11-21(20)23/h4-8,10-16,18H,9,17,19H2,1-3H3;   InChIKey=NTABMUJQZABQGD-UHFFFAOYSA-N;   SMILES=CN1c2ccccc2C(C)(C)\\C1=C/C=C/c1cc[n+](CCCS([O-])(=O)=O)c2ccccc12
 xref: PDBeChem:DIW;   PMID:22390683;   Reaxys:18882060



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Term Annotations click to browse term
  CHEBI ontology 19899
    role 19870
      application 19713
        dye 3007
          cyanine dye 11
            dimethylindole red 0
Path 2
Term Annotations click to browse term
  CHEBI ontology 19899
    subatomic particle 19897
      composite particle 19897
        hadron 19897
          baryon 19897
            nucleon 19897
              atomic nucleus 19897
                atom 19897
                  main group element atom 19836
                    main group molecular entity 19836
                      s-block molecular entity 19670
                        hydrogen molecular entity 19652
                          hydrides 19162
                            inorganic hydride 18180
                              pnictogen hydride 18170
                                nitrogen hydride 18083
                                  ammonium 8327
                                    ammonium ion derivative 8322
                                      ammonium compound 5209
                                        organoammonium salt 673
                                          quaternary ammonium salt 555
                                            dimethylindole red 0
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