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CHEBI ONTOLOGY - ANNOTATIONS

The Chemical Entities of Biological Interest (ChEBI) ontology is downloaded weekly from EMBL-EBI at http://www.ebi.ac.uk/chebi/. The data is made available under the Creative Commons License (CC BY 3.0, http://creativecommons.org/licenses/by/3.0/). For more information see: Degtyarenko et al. (2008) ChEBI: a database and ontology for chemical entities of biological interest. Nucleic Acids Res. 36, D344–D350.
Term:geranic acid
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Accession:CHEBI:67264 term browser browse the term
Definition:A polyunsaturated fatty acid that is octa-2,6-dienoic acid bearing two methyl substituents at positions 3 and 7 (the 2E-isomer).
Synonyms:exact_synonym: (2E)-3,7-dimethylocta-2,6-dienoic acid
 related_synonym: (E)-3,7-dimethylocta-2,6-dienoic acid;   3,7-Dimethyl-2E,6-octadienoic acid;   3,7-Dimethylocta-2,6-dienoate;   Formula=C10H16O2;   Geranilyc acid;   Geranoic acid;   InChI=1S/C10H16O2/c1-8(2)5-4-6-9(3)7-10(11)12/h5,7H,4,6H2,1-3H3,(H,11,12)/b9-7+;   InChIKey=ZHYZQXUYZJNEHD-VQHVLOKHSA-N;   SMILES=CC(C)=CCC\\C(C)=C\\C(O)=O;   trans-3,7-dimethyl-2,6-octadien-1-oic acid;   trans-geranic acid;   trans-geranoic acid
 xref: CAS:459-80-3;   CAS:4698-08-2;   HMDB:HMDB0036103;   KEGG:C16461;   LIPID_MAPS_instance:LMFA01030784
 xref_mesh: MESH:C043081
 xref: MetaCyc:CPD-7618;   PMID:18081247;   PMID:21033696;   PMID:21296182;   PMID:22286981;   PMID:22536331;   PMID:23286867;   Patent:US2008161397;   Patent:US2012014883;   Reaxys:1705144;   Wikipedia:Geranic_acid
 cyclic_relationship: is_conjugate_acid_of CHEBI:67260


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geranic acid term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tyr tyrosinase decreases expression ISO decaprenoic acid results in decreased expression of TYR protein CTD PMID:23286867 NCBI chr 1:141,115,036...141,210,207
Ensembl chr 1:141,115,036...141,210,207 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  CHEBI ontology 19874
    role 19844
      biological role 19842
        antimicrobial agent 18240
          antifungal agent 17158
            geranic acid 1
Path 2
Term Annotations click to browse term
  CHEBI ontology 19874
    subatomic particle 19872
      composite particle 19872
        hadron 19872
          baryon 19872
            nucleon 19872
              atomic nucleus 19872
                atom 19872
                  main group element atom 19811
                    p-block element atom 19811
                      carbon group element atom 19751
                        carbon atom 19748
                          organic molecular entity 19748
                            heteroorganic entity 19505
                              organochalcogen compound 19268
                                organooxygen compound 19184
                                  carbon oxoacid 18654
                                    carboxylic acid 18651
                                      monocarboxylic acid 18000
                                        fatty acid 16833
                                          unsaturated fatty acid 1684
                                            polyunsaturated fatty acid 847
                                              geranic acid 1
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