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CHEBI ONTOLOGY - ANNOTATIONS

The Chemical Entities of Biological Interest (ChEBI) ontology is downloaded weekly from EMBL-EBI at http://www.ebi.ac.uk/chebi/. The data is made available under the Creative Commons License (CC BY 3.0, http://creativecommons.org/licenses/by/3.0/). For more information see: Degtyarenko et al. (2008) ChEBI: a database and ontology for chemical entities of biological interest. Nucleic Acids Res. 36, D344–D350.
Term:(-)-secoisolariciresinol
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Accession:CHEBI:65004 term browser browse the term
Definition:An enantiomer of secoisolariciresinol having (-)-(2R,3R)-configuration.
Synonyms:exact_synonym: (2R,3R)-2,3-bis(4-hydroxy-3-methoxybenzyl)butane-1,4-diol
 related_synonym: Formula=C20H26O6;   InChI=1S/C20H26O6/c1-25-19-9-13(3-5-17(19)23)7-15(11-21)16(12-22)8-14-4-6-18(24)20(10-14)26-2/h3-6,9-10,15-16,21-24H,7-8,11-12H2,1-2H3/t15-,16-/m0/s1;   InChIKey=PUETUDUXMCLALY-HOTGVXAUSA-N;   SMILES=COc1cc(C[C@@H](CO)[C@H](CO)Cc2ccc(O)c(OC)c2)ccc1O
 xref: CAS:29388-59-8;   HMDB:HMDB0013692;   KEGG:C18167;   LINCS:LSM-5964
 xref_mesh: MESH:C060283
 xref: MetaCyc:CPD-8909;   PMID:15653677;   PMID:21837520;   PMID:21897049;   PMID:21958542;   PMID:22030618;   PMID:22037685;   PMID:22476613;   Reaxys:1893026
 cyclic_relationship: is_enantiomer_of CHEBI:67247


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(-)-secoisolariciresinol term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nr1i2 nuclear receptor subfamily 1, group I, member 2 increases activity ISO secoisolariciresinol results in increased activity of NR1I2 protein CTD PMID:15885729 NCBI chr11:62,460,213...62,496,665
Ensembl chr11:62,460,213...62,496,658 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  CHEBI ontology 19880
    role 19850
      application 19695
        pro-agent 11550
          prodrug 11294
            butane-1,4-diol 92
              secoisolariciresinol 1
                (-)-secoisolariciresinol 1
                  7-hydroxysecoisolariciresinol 0
Path 2
Term Annotations click to browse term
  CHEBI ontology 19880
    subatomic particle 19878
      composite particle 19878
        hadron 19878
          baryon 19878
            nucleon 19878
              atomic nucleus 19878
                atom 19878
                  main group element atom 19817
                    p-block element atom 19817
                      chalcogen 19569
                        oxygen atom 19541
                          oxygen molecular entity 19541
                            hydroxides 19347
                              organic hydroxy compound 18957
                                polyol 11693
                                  diol 3940
                                    butanediols 178
                                      butanediol 96
                                        butane-1,4-diol 92
                                          secoisolariciresinol 1
                                            (-)-secoisolariciresinol 1
                                              7-hydroxysecoisolariciresinol 0
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