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CHEBI ONTOLOGY - ANNOTATIONS

The Chemical Entities of Biological Interest (ChEBI) ontology is downloaded weekly from EMBL-EBI at http://www.ebi.ac.uk/chebi/. The data is made available under the Creative Commons License (CC BY 3.0, http://creativecommons.org/licenses/by/3.0/). For more information see: Degtyarenko et al. (2008) ChEBI: a database and ontology for chemical entities of biological interest. Nucleic Acids Res. 36, D344–D350.
Term:D-erythrose 4-phosphate
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Accession:CHEBI:48153 term browser browse the term
Definition:An erythrose phosphate that is D-erythrose carrying a phosphate group at position 4. It is an intermediate in the pentose phosphate pathway and Calvin cycle.
Synonyms:exact_synonym: (2R,3R)-2,3-dihydroxy-4-oxobutyl dihydrogen phosphate;   D-erythrose 4-(dihydrogen phosphate)
 related_synonym: 4-O-phosphono-D-erythrose;   ERYTHOSE-4-PHOSPHATE;   Formula=C4H9O7P;   InChI=1S/C4H9O7P/c5-1-3(6)4(7)2-11-12(8,9)10/h1,3-4,6-7H,2H2,(H2,8,9,10)/t3-,4+/m0/s1;   InChIKey=NGHMDNPXVRFFGS-IUYQGCFVSA-N;   SMILES=[H]C(=O)[C@H](O)[C@H](O)COP(O)(O)=O
 alt_id: CHEBI:12921;   CHEBI:4114;   CHEBI:42349
 xref: CAS:585-18-2;   DrugBank:DB03937;   KEGG:C00279;   KNApSAcK:C00007472
 xref_mesh: MESH:C026959
 xref: PDBeChem:E4P;   Reaxys:1710821;   Wikipedia:Erythrose_4-phosphate
 cyclic_relationship: is_conjugate_acid_of CHEBI:16897


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D-erythrose 4-phosphate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Idh2 isocitrate dehydrogenase (NADP(+)) 2 multiple interactions
increases abundance 		ISO Triazines inhibits the reaction [IDH2 protein mutant form results in increased abundance of erythrose 4-phosphate] CTD PMID:27469509 NCBI chr 1:143,447,925...143,467,248
Ensembl chr 1:143,439,323...143,467,248 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  CHEBI ontology 20862
    role 20820
      biological role 20818
        biochemical role 20264
          metabolite 20245
            eukaryotic metabolite 19958
              plant metabolite 18270
                D-erythrose 1
                  D-erythrose 4-phosphate 1
Path 2
Term Annotations click to browse term
  CHEBI ontology 20862
    subatomic particle 20860
      composite particle 20860
        hadron 20860
          baryon 20860
            nucleon 20860
              atomic nucleus 20860
                atom 20860
                  main group element atom 20781
                    p-block element atom 20781
                      chalcogen 20491
                        oxygen atom 20457
                          oxygen molecular entity 20457
                            hydroxides 20230
                              oxoacid 19289
                                pnictogen oxoacid 15112
                                  phosphorus oxoacid 14667
                                    phosphoric acids 13987
                                      phosphoric acid 13987
                                        phosphoric acid derivative 13899
                                          phosphate 13898
                                            organic phosphate 13898
                                              carbohydrate phosphate 1976
                                                phospho sugar 1819
                                                  aldose phosphate 1816
                                                    aldotetrose phosphate 1
                                                      erythrose phosphate 1
                                                        D-erythrose 4-phosphate 1
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