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CHEBI ONTOLOGY - ANNOTATIONS

The Chemical Entities of Biological Interest (ChEBI) ontology is downloaded weekly from EMBL-EBI at http://www.ebi.ac.uk/chebi/. The data is made available under the Creative Commons License (CC BY 3.0, http://creativecommons.org/licenses/by/3.0/). For more information see: Degtyarenko et al. (2008) ChEBI: a database and ontology for chemical entities of biological interest. Nucleic Acids Res. 36, D344–D350.

Term:gallium molecular entity
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Accession:CHEBI:37111 term browser browse the term
Synonyms:related_synonym: gallium compounds;   gallium molecular entities



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gallium nitrate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abcb7 ATP binding cassette subfamily B member 7 decreases expression ISO gallium nitrate results in decreased expression of ABCB7 mRNA CTD PMID:18586083 NCBI chr  X:73,361,296...73,502,464
Ensembl chr  X:73,361,310...73,502,547
JBrowse link
G Aco1 aconitase 1 increases expression ISO gallium nitrate results in increased expression of ACO1 mRNA CTD PMID:18586083 NCBI chr 5:60,055,895...60,111,920
Ensembl chr 5:60,055,866...60,112,600
JBrowse link
G Alb albumin multiple interactions EXP gallium nitrate inhibits the reaction [Tamoxifen results in decreased expression of ALB protein] CTD PMID:16837906 NCBI chr14:17,891,564...17,907,043
Ensembl chr14:17,891,582...17,911,865
JBrowse link
G B2m beta-2 microglobulin decreases expression ISO gallium nitrate results in decreased expression of B2M mRNA CTD PMID:18586083 NCBI chr 3:129,549,236...129,555,354
Ensembl chr 3:129,549,318...129,555,356
JBrowse link
G Bax BCL2 associated X, apoptosis regulator increases expression ISO gallium nitrate results in increased expression of BAX protein CTD PMID:17121930 NCBI chr 1:105,076,472...105,081,906
Ensembl chr 1:105,076,473...105,086,429
JBrowse link
G Calr calreticulin decreases expression ISO gallium nitrate results in decreased expression of CALR mRNA CTD PMID:18586083 NCBI chr19:40,213,367...40,218,262
Ensembl chr19:40,213,239...40,219,236
JBrowse link
G Casp3 caspase 3 increases activity
multiple interactions
ISO gallium nitrate results in increased activity of CASP3 protein
Bortezomib promotes the reaction [gallium nitrate results in increased activity of CASP3 protein]
CTD PMID:17121930 NCBI chr16:52,395,539...52,413,794
Ensembl chr16:52,395,540...52,413,732
JBrowse link
G Cat catalase decreases expression ISO gallium nitrate results in decreased expression of CAT mRNA CTD PMID:18586083 NCBI chr 3:110,297,340...110,329,526
Ensembl chr 3:110,297,342...110,329,526
JBrowse link
G Dnaja1 DnaJ heat shock protein family (Hsp40) member A1 increases expression ISO gallium nitrate results in increased expression of DNAJA1 mRNA CTD PMID:18586083 NCBI chr 5:60,638,404...60,649,315
Ensembl chr 5:60,638,410...60,650,160
JBrowse link
G Egr1 early growth response 1 increases expression ISO gallium nitrate results in increased expression of EGR1 mRNA CTD PMID:18586083 NCBI chr18:26,737,078...26,740,877
Ensembl chr18:26,736,838...26,740,843
JBrowse link
G Ftl1 ferritin light chain 1 increases expression ISO gallium nitrate results in increased expression of FTL mRNA CTD PMID:18586083 NCBI chr 1:105,072,858...105,074,705
Ensembl chr  X:45,399,355...45,399,915
Ensembl chr 2:45,399,355...45,399,915
Ensembl chr 1:45,399,355...45,399,915
JBrowse link
G Gpx4 glutathione peroxidase 4 decreases expression ISO gallium nitrate results in decreased expression of GPX4 mRNA CTD PMID:18586083 NCBI chr 7:10,300,833...10,303,629
Ensembl chr 7:10,300,832...10,303,629
JBrowse link
G Hif1a hypoxia inducible factor 1 subunit alpha decreases expression ISO gallium nitrate results in decreased expression of HIF1A mRNA CTD PMID:18586083 NCBI chr 6:98,357,788...98,405,068
Ensembl chr 6:98,359,910...98,405,323
JBrowse link
G Hmox1 heme oxygenase 1 increases expression
multiple interactions
ISO gallium nitrate results in increased expression of HMOX1 mRNA; gallium nitrate results in increased expression of HMOX1 protein
Acetylcysteine inhibits the reaction [gallium nitrate results in increased expression of HMOX1 mRNA]; SB 203580 inhibits the reaction [gallium nitrate results in increased expression of HMOX1 protein]
CTD PMID:18586083 NCBI chr19:13,452,365...13,479,823
Ensembl chr19:13,472,884...13,479,818
JBrowse link
G Hspa5 heat shock protein family A (Hsp70) member 5 decreases expression ISO gallium nitrate results in decreased expression of HSPA5 mRNA CTD PMID:18586083 NCBI chr 3:38,453,016...38,457,475
Ensembl chr 3:38,453,041...38,458,790
JBrowse link
G Hspa9 heat shock protein family A (Hsp70) member 9 decreases expression ISO gallium nitrate results in decreased expression of HSPA9 mRNA CTD PMID:18586083 NCBI chr18:26,810,004...26,832,958
Ensembl chr18:26,804,774...26,828,398
JBrowse link
G Hspb1 heat shock protein family B (small) member 1 decreases expression ISO gallium nitrate results in decreased expression of HSPB1 mRNA CTD PMID:18586083 NCBI chr12:26,430,640...26,432,301
Ensembl chr12:26,430,640...26,432,301
JBrowse link
G Hspd1 heat shock protein family D (Hsp60) member 1 decreases expression ISO gallium nitrate results in decreased expression of HSPD1 mRNA CTD PMID:18586083 NCBI chr 9:64,073,610...64,084,332
Ensembl chr 9:64,073,611...64,084,037
JBrowse link
G Mt2 metallothionein 2 multiple interactions
increases expression
ISO Acetylcysteine inhibits the reaction [gallium nitrate results in increased expression of MT2A mRNA]
gallium nitrate results in increased expression of MT2A mRNA; gallium nitrate results in increased expression of MT2A protein
CTD PMID:18586083 NCBI chr19:10,837,934...10,838,708
Ensembl chr19:10,837,927...10,838,709
JBrowse link
G Mt3 metallothionein 3 increases expression ISO gallium nitrate results in increased expression of MT3 mRNA CTD PMID:18586083 NCBI chr19:10,854,676...10,856,080
Ensembl chr19:10,854,677...10,856,080
JBrowse link
G Mtf1 metal-regulatory transcription factor 1 increases expression ISO gallium nitrate results in increased expression of MTF1 mRNA CTD PMID:18586083 NCBI chr 5:142,347,024...142,391,810
Ensembl chr 5:142,347,054...142,391,810
JBrowse link
G Myc MYC proto-oncogene, bHLH transcription factor decreases expression ISO gallium nitrate results in decreased expression of MYC mRNA CTD PMID:18586083 NCBI chr 7:95,483,105...95,488,031
Ensembl chr 7:95,483,105...95,488,028
JBrowse link
G Nfe2l2 NFE2 like bZIP transcription factor 2 multiple interactions
increases activity
ISO SB 203580 inhibits the reaction [gallium nitrate results in increased activity of NFE2L2 protein] CTD PMID:18586083 NCBI chr 3:81,001,529...81,031,165
Ensembl chr 3:81,001,529...81,029,090
JBrowse link
G Popdc2 popeye domain cAMP effector 2 decreases expression ISO gallium nitrate results in decreased expression of POPDC2 mRNA CTD PMID:18586083 NCBI chr11:62,351,843...62,398,688
Ensembl chr11:75,880,274...75,896,269
JBrowse link
G Prdx4 peroxiredoxin 4 decreases expression ISO gallium nitrate results in decreased expression of PRDX4 mRNA CTD PMID:18586083 NCBI chr  X:43,876,374...43,893,815
Ensembl chr  X:43,876,417...43,893,812
JBrowse link
G Pth parathyroid hormone multiple interactions EXP gallium nitrate inhibits the reaction [Tamoxifen results in decreased expression of PTH protein] CTD PMID:16837906 NCBI chr 1:176,942,901...176,946,034
Ensembl chr 1:176,943,102...176,946,034
JBrowse link
G Slc39a6 solute carrier family 39 member 6 decreases expression ISO gallium nitrate results in decreased expression of SLC39A6 mRNA CTD PMID:18586083 NCBI chr18:16,139,621...16,160,163
Ensembl chr18:16,135,008...16,160,163
JBrowse link
G Slc40a1 solute carrier family 40 member 1 decreases expression ISO gallium nitrate results in decreased expression of SLC40A1 mRNA CTD PMID:18586083 NCBI chr 9:55,525,457...55,633,463
Ensembl chr 9:55,525,532...55,543,460
JBrowse link
G Sod1 superoxide dismutase 1 decreases expression ISO gallium nitrate results in decreased expression of SOD1 mRNA CTD PMID:18586083 NCBI chr11:42,942,742...42,948,399
Ensembl chr11:42,942,678...42,948,399
JBrowse link
G Sod2 superoxide dismutase 2 decreases expression ISO gallium nitrate results in decreased expression of SOD2 mRNA CTD PMID:18586083 NCBI chr 1:50,043,323...50,050,168
Ensembl chr 1:50,043,325...50,050,168
JBrowse link
G Tf transferrin multiple interactions ISO gallium nitrate promotes the reaction [TF protein results in increased uptake of Iron] CTD PMID:11335103 NCBI chr 8:112,668,667...112,695,376
Ensembl chr 8:112,647,642...112,695,400
JBrowse link
G Tfrc transferrin receptor decreases expression ISO gallium nitrate results in decreased expression of TFRC mRNA CTD PMID:18586083 NCBI chr11:81,668,478...81,690,318
Ensembl chr11:81,668,478...81,690,318
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  CHEBI ontology 20862
    chemical entity 20860
      atom 20860
        metal atom 18405
          post-transition metal atom 5843
            gallium atom 33
              gallium molecular entity 32
                elemental gallium + 0
                flotufolastat F-18 gallium 0
                gallane + 0
                gallium salt + 32
                gallium(3+) 0
Path 2
Term Annotations click to browse term
  CHEBI ontology 20862
    subatomic particle 20860
      composite particle 20860
        hadron 20860
          baryon 20860
            nucleon 20860
              atomic nucleus 20860
                atom 20860
                  main group element atom 20781
                    main group molecular entity 20781
                      p-block molecular entity 20781
                        boron group molecular entity 1166
                          gallium molecular entity 32
                            elemental gallium + 0
                            flotufolastat F-18 gallium 0
                            gallane + 0
                            gallium salt + 32
                            gallium(3+) 0
paths to the root