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CHEBI ONTOLOGY - ANNOTATIONS

The Chemical Entities of Biological Interest (ChEBI) ontology is downloaded weekly from EMBL-EBI at http://www.ebi.ac.uk/chebi/. The data is made available under the Creative Commons License (CC BY 3.0, http://creativecommons.org/licenses/by/3.0/). For more information see: Degtyarenko et al. (2008) ChEBI: a database and ontology for chemical entities of biological interest. Nucleic Acids Res. 36, D344–D350.
Term:elemental selenium
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Accession:CHEBI:36904 term browser browse the term
Synonyms:xref: CAS:7782-49-2
 xref_mesh: MESH:D012643


show annotations for term's descendants           Sort by:
elemental selenium term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATF4 activating transcription factor 4 multiple interactions EXP Selenium analog inhibits the reaction [deoxynivalenol results in increased expression of ATF4 protein] CTD PMID:37442268 NCBI chr 5:8,742,964...8,745,752
Ensembl chr 5:8,742,967...8,745,368 		JBrowse link
G BAX BCL2 associated X, apoptosis regulator multiple interactions EXP Selenium inhibits the reaction [Cadmium results in increased expression of BAX protein] CTD PMID:19135140 NCBI chr 6:54,222,341...54,228,150
Ensembl chr 6:54,222,336...54,228,147 		JBrowse link
G BCL2 BCL2 apoptosis regulator multiple interactions EXP Selenium inhibits the reaction [Cadmium results in decreased expression of BCL2 protein] CTD PMID:19135140 NCBI chr 1:158,337,403...158,518,214
Ensembl chr 1:158,337,522...158,518,879 		JBrowse link
G CASP3 caspase 3 multiple interactions EXP Selenium inhibits the reaction [Cadmium Chloride results in increased activity of CASP3 protein]; Selenium inhibits the reaction [Cadmium results in increased activity of CASP3 protein] CTD PMID:17383151 PMID:19135140 NCBI chr15:45,744,320...45,753,252
Ensembl chr15:45,742,751...45,764,213 		JBrowse link
G CASP9 caspase 9 multiple interactions EXP Selenium inhibits the reaction [Cadmium results in increased activity of CASP9 protein] CTD PMID:19135140 NCBI chr 6:74,707,597...74,730,033
Ensembl chr 6:74,706,516...74,730,007 		JBrowse link
G CLDN1 claudin 1 multiple interactions EXP Selenium analog inhibits the reaction [deoxynivalenol results in decreased expression of CLDN1 protein] CTD PMID:37442268 NCBI chr13:127,714,857...127,730,628
Ensembl chr13:127,712,777...127,730,657 		JBrowse link
G CXCL8 C-X-C motif chemokine ligand 8 multiple interactions EXP Selenium analog inhibits the reaction [deoxynivalenol results in increased expression of CXCL8 protein] CTD PMID:37442268 NCBI chr 8:69,932,646...69,935,861
Ensembl chr 8:69,932,643...69,935,861 		JBrowse link
G DDIT3 DNA damage inducible transcript 3 multiple interactions EXP Selenium analog inhibits the reaction [deoxynivalenol results in increased expression of DDIT3 protein] CTD PMID:37442268 NCBI chr 5:22,785,441...22,789,867
Ensembl chr 5:22,785,445...22,789,829 		JBrowse link
G EIF2A eukaryotic translation initiation factor 2A multiple interactions EXP Selenium analog inhibits the reaction [deoxynivalenol results in increased phosphorylation of EIF2A protein] CTD PMID:37442268 NCBI chr13:90,761,453...90,804,274
Ensembl chr13:90,761,465...90,804,274 		JBrowse link
G EIF2AK3 eukaryotic translation initiation factor 2 alpha kinase 3 multiple interactions EXP Selenium analog inhibits the reaction [deoxynivalenol results in increased phosphorylation of EIF2AK3 protein] CTD PMID:37442268 NCBI chr 3:57,423,894...57,506,247
Ensembl chr 3:57,423,943...57,506,245 		JBrowse link
G GAPDH glyceraldehyde-3-phosphate dehydrogenase multiple interactions EXP Selenium inhibits the reaction [Paraquat results in decreased activity of GAPDH protein] CTD PMID:17055214 NCBI chr 5:64,129,678...64,135,194
Ensembl chr 5:64,129,679...64,133,991 		JBrowse link
G GPX1 glutathione peroxidase 1 increases activity EXP Selenium analog results in increased activity of GPX1 protein CTD PMID:37442268 NCBI chr13:31,916,269...31,917,337
Ensembl chr13:31,916,246...31,917,433 		JBrowse link
G HSPA5 heat shock protein family A (Hsp70) member 5 multiple interactions EXP Selenium analog inhibits the reaction [deoxynivalenol results in increased expression of HSPA5 protein] CTD PMID:37442268 NCBI chr 1:265,930,044...265,934,959
Ensembl chr 1:265,930,045...265,934,894 		JBrowse link
G IL10 interleukin 10 multiple interactions EXP Selenium analog inhibits the reaction [deoxynivalenol results in decreased expression of IL10 protein] CTD PMID:37442268 NCBI chr 9:67,400,727...67,405,941
Ensembl chr 9:67,400,728...67,405,378 		JBrowse link
G IL6 interleukin 6 multiple interactions EXP Selenium analog inhibits the reaction [deoxynivalenol results in increased expression of IL6 protein] CTD PMID:37442268 NCBI chr 9:91,506,421...91,510,830
Ensembl chr 9:91,506,421...91,511,263 		JBrowse link
G ITPR1 inositol 1,4,5-trisphosphate receptor type 1 multiple interactions EXP Selenium analog inhibits the reaction [deoxynivalenol results in increased expression of ITPR1 protein] CTD PMID:37442268 NCBI chr13:61,068,131...61,398,918
Ensembl chr13:61,068,126...61,398,912 		JBrowse link
G MAPK8 mitogen-activated protein kinase 8 multiple interactions EXP Selenium inhibits the reaction [Cadmium Chloride results in increased phosphorylation of MAPK8 protein] CTD PMID:17383151 NCBI chr14:88,988,914...89,108,875
Ensembl chr14:88,988,949...89,108,874 		JBrowse link
G MAPK9 mitogen-activated protein kinase 9 multiple interactions EXP Selenium inhibits the reaction [Cadmium Chloride results in increased phosphorylation of MAPK9 protein] CTD PMID:17383151 NCBI chr 2:78,338,466...78,399,108
Ensembl chr 2:78,338,376...78,399,100 		JBrowse link
G OCLN occludin multiple interactions EXP Selenium analog inhibits the reaction [deoxynivalenol results in decreased expression of OCLN protein] CTD PMID:37442268 NCBI chr16:47,600,175...47,652,435
Ensembl chr16:47,600,212...47,654,033 		JBrowse link
G SOD1 superoxide dismutase 1 multiple interactions EXP Selenium analog inhibits the reaction [deoxynivalenol results in increased activity of SOD1 protein] CTD PMID:37442268 NCBI chr13:195,326,573...195,335,273
Ensembl chr13:195,326,649...195,337,729 		JBrowse link
G TGFB1 transforming growth factor beta 1 multiple interactions EXP Selenium analog inhibits the reaction [deoxynivalenol results in decreased expression of TGFB1 protein] CTD PMID:37442268 NCBI chr 6:49,332,169...49,348,642
Ensembl chr 6:49,332,173...49,349,046 		JBrowse link
G TJP1 tight junction protein 1 multiple interactions EXP Selenium analog inhibits the reaction [deoxynivalenol results in decreased expression of TJP1 protein] CTD PMID:37442268 NCBI chr 1:144,930,387...145,195,857
Ensembl chr 1:144,930,370...145,195,836 		JBrowse link
G TXNRD1 thioredoxin reductase 1 increases expression
multiple interactions
increases activity		 EXP Selenium results in increased expression of TXNRD1 mRNA
Selenium inhibits the reaction [Paraquat results in decreased activity of TXNRD1 protein]
Selenium analog results in increased activity of TXNRD1 protein; Selenium results in increased activity of TXNRD1 protein		 CTD PMID:16908641 PMID:17055214 PMID:37442268 NCBI chr 5:80,170,334...80,213,889
Ensembl chr 5:80,172,260...80,236,219 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  CHEBI ontology 5151
    chemical entity 5151
      atom 5142
        nonmetal atom 5108
          selenium atom 40
            selenium molecular entity 40
              elemental selenium 23
                cyclooctaselenium 0
                diselenium 0
                selenide + 0
                selenide(.1-) 0
                selenium ion + 0
Path 2
Term Annotations click to browse term
  CHEBI ontology 5151
    subatomic particle 5142
      composite particle 5142
        hadron 5142
          baryon 5142
            nucleon 5142
              atomic nucleus 5142
                atom 5142
                  main group element atom 5115
                    p-block element atom 5112
                      p-block molecular entity 5112
                        chalcogen molecular entity 5009
                          selenium molecular entity 40
                            elemental selenium 23
                              cyclooctaselenium 0
                              diselenium 0
                              selenide + 0
                              selenide(.1-) 0
                              selenium ion + 0
paths to the root