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CHEBI ONTOLOGY - ANNOTATIONS

The Chemical Entities of Biological Interest (ChEBI) ontology is downloaded weekly from EMBL-EBI at http://www.ebi.ac.uk/chebi/. The data is made available under the Creative Commons License (CC BY 3.0, http://creativecommons.org/licenses/by/3.0/). For more information see: Degtyarenko et al. (2008) ChEBI: a database and ontology for chemical entities of biological interest. Nucleic Acids Res. 36, D344–D350.
Term:tridecane
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Accession:CHEBI:35998 term browser browse the term
Definition:A straight chain alkane containing 13 carbon atoms. It forms a component of the essential oils isolated from plants such as Abelmoschus esculentus.
Synonyms:related_synonym: CH3-[CH2]11-CH3;   Formula=C13H28;   InChI=1S/C13H28/c1-3-5-7-9-11-13-12-10-8-6-4-2/h3-13H2,1-2H3;   InChIKey=IIYFAKIEWZDVMP-UHFFFAOYSA-N;   SMILES=CCCCCCCCCCCCC;   Tridekan;   n-tridecane
 alt_id: CHEBI:32901;   CHEBI:35025;   CHEBI:46104
 xref: Beilstein:1733089;   CAS:629-50-5;   Gmelin:1222217;   HMDB:HMDB0034284;   KEGG:C13834;   LIPID_MAPS_instance:LMFA11000001
 xref_mesh: MESH:C094074
 xref: PDBeChem:TRD;   PMID:23768323;   PMID:24010324;   Reaxys:1733089;   Wikipedia:Tridecane


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tridecane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Il1a interleukin 1 alpha multiple interactions ISO tridecane results in increased expression of and results in increased secretion of IL1A protein CTD PMID:19720135 NCBI chr 3:136,979,804...136,990,236
Ensembl chr 3:136,979,805...136,998,013 		JBrowse link
G Il6 interleukin 6 multiple interactions ISO tridecane results in increased expression of and results in increased secretion of IL6 protein CTD PMID:19720135 NCBI chr 4:5,889,999...5,894,575
Ensembl chr 4:5,889,999...5,894,610 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  CHEBI ontology 20862
    role 20820
      biological role 20818
        biochemical role 20264
          volatile oil component 8051
            tridecane 2
              12-methyltridecan-1-ol 0
              2-methyltridecane 0
              tridecan-2-one 0
              tridecanal 0
              tridecanol + 0
              tridecyl group 0
Path 2
Term Annotations click to browse term
  CHEBI ontology 20862
    subatomic particle 20860
      composite particle 20860
        hadron 20860
          baryon 20860
            nucleon 20860
              atomic nucleus 20860
                atom 20860
                  main group element atom 20781
                    main group molecular entity 20781
                      s-block molecular entity 20574
                        hydrogen molecular entity 20558
                          hydrides 19693
                            organic hydride 19079
                              organic fundamental parent 19079
                                hydrocarbon 18731
                                  alkane 14828
                                    long-chain alkane 627
                                      tridecane 2
                                        12-methyltridecan-1-ol 0
                                        2-methyltridecane 0
                                        tridecan-2-one 0
                                        tridecanal 0
                                        tridecanol + 0
                                        tridecyl group 0
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