Send us a Message



Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   

CHEBI ONTOLOGY - ANNOTATIONS

The Chemical Entities of Biological Interest (ChEBI) ontology is downloaded weekly from EMBL-EBI at http://www.ebi.ac.uk/chebi/. The data is made available under the Creative Commons License (CC BY 3.0, http://creativecommons.org/licenses/by/3.0/). For more information see: Degtyarenko et al. (2008) ChEBI: a database and ontology for chemical entities of biological interest. Nucleic Acids Res. 36, D344–D350.

Term:copper group element atom
go back to main search page
Accession:CHEBI:33366 term browser browse the term
Synonyms:exact_synonym: group 11 elements
 related_synonym: coinage metals;   copper group element;   copper group elements



show annotations for term's descendants           Sort by:
copper atom term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATP7B ATPase copper transporting beta affects binding
multiple interactions
EXP Copper binds to ATP7B protein
Cholera Toxin inhibits the reaction [Copper binds to ATP7B protein]; Colforsin inhibits the reaction [Copper binds to ATP7B protein]; Cyclic AMP inhibits the reaction [Copper binds to ATP7B protein]; PRKACA protein inhibits the reaction [Copper binds to ATP7B protein]
CTD PMID:21084060 NCBI chr11:15,892,549...15,942,070
Ensembl chr11:15,876,612...15,942,064
JBrowse link
G GNRH1 gonadotropin releasing hormone 1 affects binding
multiple interactions
EXP Copper binds to GNRH1 protein
[Copper binds to GNRH1 protein] which results in increased secretion of LHB protein
CTD PMID:16892001 NCBI chr14:9,442,971...9,447,521
Ensembl chr14:9,442,971...9,453,035
JBrowse link
G IGF1 insulin like growth factor 1 increases expression EXP Copper results in increased expression of IGF1 mRNA CTD PMID:22367704 NCBI chr 5:81,762,027...81,909,253
Ensembl chr 5:81,775,970...81,848,033
JBrowse link
G LHB luteinizing hormone subunit beta multiple interactions EXP [Copper binds to GNRH1 protein] which results in increased secretion of LHB protein CTD PMID:16892001 NCBI chr 6:54,263,574...54,269,286
Ensembl chr 6:54,263,576...54,271,086
JBrowse link
G PRKACA protein kinase cAMP-activated catalytic subunit alpha multiple interactions EXP PRKACA protein inhibits the reaction [Copper binds to ATP7B protein] CTD PMID:21084060 NCBI chr 2:65,074,876...65,095,564
Ensembl chr 2:65,074,870...65,095,551
JBrowse link
copper(0) term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATP7B ATPase copper transporting beta multiple interactions
affects binding
EXP Cholera Toxin inhibits the reaction [Copper binds to ATP7B protein]; Colforsin inhibits the reaction [Copper binds to ATP7B protein]; Cyclic AMP inhibits the reaction [Copper binds to ATP7B protein]; PRKACA protein inhibits the reaction [Copper binds to ATP7B protein] CTD PMID:21084060 NCBI chr11:15,892,549...15,942,070
Ensembl chr11:15,876,612...15,942,064
JBrowse link
G GNRH1 gonadotropin releasing hormone 1 affects binding
multiple interactions
EXP Copper binds to GNRH1 protein
[Copper binds to GNRH1 protein] which results in increased secretion of LHB protein
CTD PMID:16892001 NCBI chr14:9,442,971...9,447,521
Ensembl chr14:9,442,971...9,453,035
JBrowse link
G IGF1 insulin like growth factor 1 increases expression EXP Copper results in increased expression of IGF1 mRNA CTD PMID:22367704 NCBI chr 5:81,762,027...81,909,253
Ensembl chr 5:81,775,970...81,848,033
JBrowse link
G LHB luteinizing hormone subunit beta multiple interactions EXP [Copper binds to GNRH1 protein] which results in increased secretion of LHB protein CTD PMID:16892001 NCBI chr 6:54,263,574...54,269,286
Ensembl chr 6:54,263,576...54,271,086
JBrowse link
G PRKACA protein kinase cAMP-activated catalytic subunit alpha multiple interactions EXP PRKACA protein inhibits the reaction [Copper binds to ATP7B protein] CTD PMID:21084060 NCBI chr 2:65,074,876...65,095,564
Ensembl chr 2:65,074,870...65,095,551
JBrowse link
copper(II) chloride term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AOC1 amine oxidase copper containing 1 increases activity EXP cupric chloride results in increased activity of AOC1 protein CTD PMID:16842785 NCBI chr18:6,309,583...6,321,016
Ensembl chr18:6,309,594...6,320,974
JBrowse link
copper(II) sulfate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATOX1 antioxidant 1 copper chaperone increases expression EXP Copper Sulfate results in increased expression of ATOX1 mRNA CTD PMID:22585802 NCBI chr16:71,299,321...71,314,598
Ensembl chr16:71,299,321...71,314,597
JBrowse link
G CCNB1 cyclin B1 increases secretion EXP Copper Sulfate results in increased secretion of CCNB1 protein CTD PMID:24521407 NCBI chr16:47,338,239...47,348,385
Ensembl chr16:47,338,110...47,348,377
JBrowse link
G COX17 cytochrome c oxidase copper chaperone COX17 decreases expression EXP Copper Sulfate results in decreased expression of COX17 mRNA CTD PMID:22585802 NCBI chr13:140,584,286...140,594,636
Ensembl chr13:140,584,363...140,587,621
JBrowse link
G GHRH growth hormone releasing hormone increases expression EXP Copper Sulfate results in increased expression of GHRH mRNA CTD PMID:21110139 NCBI chr17:40,386,725...40,398,312
Ensembl chr17:40,387,344...40,397,857
JBrowse link
G HSP90B1 heat shock protein 90 beta family member 1 increases expression EXP Copper Sulfate results in increased expression of HSP90B1 mRNA CTD PMID:17464326 NCBI chr 5:80,511,513...80,531,016
Ensembl chr 5:80,511,506...80,530,991
JBrowse link
G HSPA5 heat shock protein family A (Hsp70) member 5 increases expression EXP Copper Sulfate results in increased expression of HSPA5 mRNA CTD PMID:17464326 NCBI chr 1:265,930,044...265,934,959
Ensembl chr 1:265,930,045...265,934,894
JBrowse link
G IGF1 insulin like growth factor 1 increases secretion EXP Copper Sulfate results in increased secretion of IGF1 protein CTD PMID:24521407 NCBI chr 5:81,762,027...81,909,253
Ensembl chr 5:81,775,970...81,848,033
JBrowse link
G SST somatostatin decreases expression EXP Copper Sulfate results in decreased expression of SST mRNA; Copper Sulfate results in decreased expression of SST protein CTD PMID:21110139 NCBI chr13:125,337,560...125,338,742
Ensembl chr13:125,337,418...125,338,850
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  CHEBI ontology 5148
    chemical entity 5148
      atom 5139
        metal atom 243
          transition element atom 199
            copper group element atom 13
              copper atom + 13
              copper group molecular entity + 13
              gold atom + 0
              roentgenium atom + 0
              silver atom + 0
Path 2
Term Annotations click to browse term
  CHEBI ontology 5148
    subatomic particle 5139
      composite particle 5139
        hadron 5139
          baryon 5139
            nucleon 5139
              atomic nucleus 5139
                atom 5139
                  metal atom 243
                    transition element atom 199
                      d-block element atom 199
                        copper group element atom 13
                          copper atom + 13
                          copper group molecular entity + 13
                          gold atom + 0
                          roentgenium atom + 0
                          silver atom + 0
paths to the root