Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
Advanced Search (OLGA)

CHEBI ONTOLOGY - ANNOTATIONS

The Chemical Entities of Biological Interest (ChEBI) ontology is downloaded weekly from EMBL-EBI at http://www.ebi.ac.uk/chebi/. The data is made available under the Creative Commons License (CC BY 3.0, http://creativecommons.org/licenses/by/3.0/). For more information see: Degtyarenko et al. (2008) ChEBI: a database and ontology for chemical entities of biological interest. Nucleic Acids Res. 36, D344–D350.
Term:main group element atom
go back to main search page
Accession:CHEBI:33318 term browser browse the term
Definition:An atom belonging to one of the main groups (found in the s- and p- blocks) of the periodic table.
Synonyms:exact_synonym: main group elements
 related_synonym: Hauptgruppenelement;   Hauptgruppenelemente;   main group element

GViewer not supported for the selected species.

show annotations for term's descendants           Sort by:
(S)-nicotine term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CYP2B6 cytochrome P450 family 2 subfamily B member 6 increases expression
multiple interactions		 EXP Nicotine results in increased expression of CYP2B6 protein
[Nicotine co-treated with Ethanol] results in increased expression of CYP2B6 protein		 CTD PMID:22935730 NCBI chr 6:35,392,699...35,418,171
Ensembl chr 6:35,393,342...35,418,106 		JBrowse link
cobalt dichloride term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SOD3 superoxide dismutase 3 decreases expression
multiple interactions		 EXP cobaltous chloride results in decreased expression of SOD3 mRNA; cobaltous chloride results in decreased expression of SOD3 protein
6-hydroxy-2,5,7,8-tetramethylchroman-2-carboxylic acid inhibits the reaction [cobaltous chloride results in decreased expression of SOD3 mRNA]; SB 203580 inhibits the reaction [cobaltous chloride results in decreased expression of SOD3 mRNA]		 CTD PMID:19031313 NCBI chr27:25,554,474...25,559,873
Ensembl chr27:25,555,082...25,555,804 		JBrowse link
ethanol term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CYP2B6 cytochrome P450 family 2 subfamily B member 6 multiple interactions EXP [Nicotine co-treated with Ethanol] results in increased expression of CYP2B6 protein CTD PMID:22935730 NCBI chr 6:35,392,699...35,418,171
Ensembl chr 6:35,393,342...35,418,106 		JBrowse link
nicotine term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CYP2B6 cytochrome P450 family 2 subfamily B member 6 multiple interactions
increases expression		 EXP [Nicotine co-treated with Ethanol] results in increased expression of CYP2B6 protein
Nicotine results in increased expression of CYP2B6 protein		 CTD PMID:22935730 NCBI chr 6:35,392,699...35,418,171
Ensembl chr 6:35,393,342...35,418,106 		JBrowse link
phenobarbital term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CYP2B6 cytochrome P450 family 2 subfamily B member 6 increases expression EXP Phenobarbital results in increased expression of CYP2B6 mRNA CTD PMID:22935730 NCBI chr 6:35,392,699...35,418,171
Ensembl chr 6:35,393,342...35,418,106 		JBrowse link
SB 203580 term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SOD3 superoxide dismutase 3 multiple interactions EXP SB 203580 inhibits the reaction [cobaltous chloride results in decreased expression of SOD3 mRNA] CTD PMID:19031313 NCBI chr27:25,554,474...25,559,873
Ensembl chr27:25,555,082...25,555,804 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  CHEBI ontology 2
    chemical entity 2
      atom 2
        main group element atom 2
          alkali metal atom + 0
          alkaline earth metal atom + 0
          main group molecular entity + 2
          noble gas atom + 0
          p-block element atom + 2
Path 2
Term Annotations click to browse term
  CHEBI ontology 2
    subatomic particle 2
      composite particle 2
        hadron 2
          baryon 2
            nucleon 2
              atomic nucleus 2
                atom 2
                  main group element atom 2
                    alkali metal atom + 0
                    alkaline earth metal atom + 0
                    main group molecular entity + 2
                    noble gas atom + 0
                    p-block element atom + 2
paths to the root