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CHEBI ONTOLOGY - ANNOTATIONS

The Chemical Entities of Biological Interest (ChEBI) ontology is downloaded weekly from EMBL-EBI at http://www.ebi.ac.uk/chebi/. The data is made available under the Creative Commons License (CC BY 3.0, http://creativecommons.org/licenses/by/3.0/). For more information see: Degtyarenko et al. (2008) ChEBI: a database and ontology for chemical entities of biological interest. Nucleic Acids Res. 36, D344–D350.

Term:farnesal
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Accession:CHEBI:24012 term browser browse the term
Definition:A farnesane sesquiterpenoid that has formula C15H24O.
Synonyms:exact_synonym: 3,7,11-trimethyldodeca-2,6,10-trienal
 related_synonym: 3,7,11-trimethyl-2,6,10-dodecatrienal;   Formula=C15H24O;   InChI=1S/C15H24O/c1-13(2)7-5-8-14(3)9-6-10-15(4)11-12-16/h7,9,11-12H,5-6,8,10H2,1-4H3;   InChIKey=YHRUHBBTQZKMEX-UHFFFAOYSA-N;   SMILES=[H]C(=O)C=C(C)CCC=C(C)CCC=C(C)C
 xref: Beilstein:1723427;   CAS:19317-11-4;   Gmelin:1784234;   KEGG:C16501;   KNApSAcK:C00030246
 xref_mesh: MESH:C084519



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farnesal term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Akr1b10 aldo-keto reductase family 1 member B10 increases reduction ISO AKR1B10 protein results in increased reduction of farnesal CTD PMID:21187079 NCBI chr 4:64,005,632...64,027,860 JBrowse link
G Akr1c2 aldo-keto reductase family 1, member C2 increases expression ISO farnesal results in increased expression of AKR1C2 mRNA CTD PMID:20491607 NCBI chr17:70,669,684...70,717,935 JBrowse link
G Akr1c3 aldo-keto reductase family 1, member C3 increases reduction ISO AKR1C3 protein results in increased reduction of farnesal CTD PMID:21187079 NCBI chr17:71,020,884...71,037,779 JBrowse link
G Gclc glutamate-cysteine ligase, catalytic subunit increases expression ISO farnesal results in increased expression of GCLC mRNA CTD PMID:20491607 NCBI chr 8:87,510,251...87,548,896 JBrowse link
G Mt2A metallothionein 2A increases expression ISO farnesal results in increased expression of MT2A mRNA CTD PMID:20491607 NCBI chr19:10,837,934...10,838,708 JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  CHEBI ontology 19898
    chemical entity 19896
      atom 19896
        nonmetal atom 19818
          carbon atom 19770
            organic molecular entity 19770
              olefinic compound 16992
                enal 3111
                  farnesal 5
                    (2-cis,6-trans)-farnesal 0
                    (2-trans,6-trans)-farnesal 0
Path 2
Term Annotations click to browse term
  CHEBI ontology 19898
    subatomic particle 19896
      composite particle 19896
        hadron 19896
          baryon 19896
            nucleon 19896
              atomic nucleus 19896
                atom 19896
                  main group element atom 19835
                    p-block element atom 19835
                      carbon group element atom 19774
                        carbon atom 19770
                          organic molecular entity 19770
                            heteroorganic entity 19535
                              organochalcogen compound 19296
                                organooxygen compound 19213
                                  carbon oxoacid 18682
                                    carboxylic acid 18679
                                      carboacyl group 17726
                                        univalent carboacyl group 17726
                                          formyl group 9386
                                            aldehyde 9386
                                              alpha,beta-unsaturated aldehyde 3111
                                                enal 3111
                                                  farnesal 5
                                                    (2-cis,6-trans)-farnesal 0
                                                    (2-trans,6-trans)-farnesal 0
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