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CHEBI ONTOLOGY - ANNOTATIONS

The Chemical Entities of Biological Interest (ChEBI) ontology is downloaded weekly from EMBL-EBI at http://www.ebi.ac.uk/chebi/. The data is made available under the Creative Commons License (CC BY 3.0, http://creativecommons.org/licenses/by/3.0/). For more information see: Degtyarenko et al. (2008) ChEBI: a database and ontology for chemical entities of biological interest. Nucleic Acids Res. 36, D344–D350.
Term:dUMP
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Accession:CHEBI:17622 term browser browse the term
Definition:A pyrimidine 2'-deoxyribonucleoside 5'-monophosphate having uracil as the nucleobase.
Synonyms:exact_synonym: 2'-deoxy-5'-uridylic acid
 related_synonym: 2'-Deoxyuridine 5'-phosphate;   2'-deoxyuridine 5'-monophosphate;   Deoxyuridine 5'-phosphate;   Deoxyuridine monophosphate;   Deoxyuridylic acid;   Formula=C9H13N2O8P;   InChI=1S/C9H13N2O8P/c12-5-3-8(11-2-1-7(13)10-9(11)14)19-6(5)4-18-20(15,16)17/h1-2,5-6,8,12H,3-4H2,(H,10,13,14)(H2,15,16,17)/t5-,6+,8+/m0/s1;   InChIKey=JSRLJPSBLDHEIO-SHYZEUOFSA-N;   SMILES=O[C@H]1C[C@@H](O[C@@H]1COP(O)(O)=O)n1ccc(=O)[nH]c1=O;   deoxyuridylate
 alt_id: CHEBI:10532;   CHEBI:14094;   CHEBI:19263;   CHEBI:42245;   CHEBI:46286;   CHEBI:46288;   CHEBI:47722
 xref: CAS:964-26-1;   DrugBank:DB03800;   HMDB:HMDB0001409;   KEGG:C00365;   KNApSAcK:C00019282
 xref_mesh: MESH:C007267
 xref: MetaCyc:DUMP;   PDBeChem:DU;   PDBeChem:UMP;   PMID:22770225;   PMID:24147825;   Reaxys:42143;   Wikipedia:Deoxyuridine_monophosphate
 cyclic_relationship: is_conjugate_acid_of CHEBI:246422


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dUMP term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abcc5 ATP binding cassette subfamily C member 5 increases export ISO ABCC5 protein results in increased export of 2'-deoxyuridylic acid CTD PMID:15897250 NCBI chr11:80,473,809...80,567,257
Ensembl chr11:80,473,872...80,567,253 		JBrowse link
G Tyms thymidylate synthetase multiple interactions ISO [Fluorouracil results in decreased activity of TYMS protein] which results in increased abundance of 2'-deoxyuridylic acid CTD PMID:29258758 NCBI chr 9:113,313,454...113,329,551
Ensembl chr 9:113,313,452...113,329,536 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  CHEBI ontology 19922
    role 19894
      biological role 19864
        biochemical role 19596
          metabolite 19558
            dUMP 2
              2'-deoxy-5-(4,5-dihydroxypentyl)uridine 5'-monophosphate 0
              5,6-dihydroxy-2'-deoxyuridine 5'-monophosphate 0
              5-carboxy-2'-deoxyuridine 5'-monophosphate 0
              dUMP 3'-end residue 0
              dUMP 5'-end residue 0
              dUMP residue + 0
Path 2
Term Annotations click to browse term
  CHEBI ontology 19922
    subatomic particle 19892
      composite particle 19892
        hadron 19920
          baryon 19892
            nucleon 19920
              atomic nucleus 19892
                atom 19892
                  main group element atom 19866
                    p-block element atom 19866
                      chalcogen 19587
                        oxygen atom 19587
                          oxygen molecular entity 19587
                            hydroxides 19390
                              oxoacid 18821
                                pnictogen oxoacid 14983
                                  phosphorus oxoacid 14581
                                    phosphoric acids 13915
                                      phosphoric acid 13923
                                        phosphoric acid derivative 13828
                                          phosphate 13820
                                            organic phosphate 13820
                                              carbohydrate phosphate 1871
                                                phospho sugar 1714
                                                  aldose phosphate 1713
                                                    aldopentose phosphate 1705
                                                      deoxyaldopentose phosphate 9
                                                        2-deoxyribose phosphate 9
                                                          2'-deoxyribonucleotide 8
                                                            2'-deoxyribonucleoside 5'-phosphate 8
                                                              2'-deoxyribonucleoside 5'-monophosphate 3
                                                                pyrimidine 2'-deoxyribonucleoside 5'-monophosphate 3
                                                                  dUMP 2
                                                                    2'-deoxy-5-(4,5-dihydroxypentyl)uridine 5'-monophosphate 0
                                                                    5,6-dihydroxy-2'-deoxyuridine 5'-monophosphate 0
                                                                    5-carboxy-2'-deoxyuridine 5'-monophosphate 0
                                                                    dUMP 3'-end residue 0
                                                                    dUMP 5'-end residue 0
                                                                    dUMP residue + 0
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