CHEBI ONTOLOGY - ANNOTATIONS
The Chemical Entities of Biological Interest (ChEBI) ontology is downloaded weekly from EMBL-EBI at http://www.ebi.ac.uk/chebi/ . The data is made available under the Creative Commons License (CC BY 3.0, http://creativecommons.org/licenses/by/3.0/ ). For more information see: Degtyarenko et al. (2008) ChEBI: a database and ontology for chemical entities of biological interest. Nucleic Acids Res. 36, D344–D350.
Term: cytidine
Accession: CHEBI:17562
browse the term
Definition: A pyrimidine nucleoside in which cytosine is attached to ribofuranose via a beta-N(1)-glycosidic bond.
Synonyms: related_synonym: 1-beta-D-Ribofuranosylcytosine; 1beta-D-ribofuranosylcytosine; 4-AMINO-1-BETA-D-RIBOFURANOSYL-2(1H)-PYRIMIDINONE; 4-amino-1-beta-D-ribofuranosylpyrimidin-2(1H)-one; 4-amino-1beta-D-ribofuranosyl-2(1H)-pyrimidinone; Cyd; Cytidin; Cytosine riboside; Formula=C9H13N3O5; InChI=1S/C9H13N3O5/c10-5-1-2-12(9(16)11-5)8-7(15)6(14)4(3-13)17-8/h1-2,4,6-8,13-15H,3H2,(H2,10,11,16)/t4-,6-,7-,8-/m1/s1; InChIKey=UHDGCWIWMRVCDJ-XVFCMESISA-N; SMILES=Nc1ccn([C@@H]2O[C@H](CO)[C@@H](O)[C@H]2O)c(=O)n1; Zytidin; cytosine-1beta-D-Ribofuranoside
alt_id: CHEBI:14063; CHEBI:23515; CHEBI:4053; CHEBI:41649; CHEBI:41686; CHEBI:41704
xref: Beilstein:89173; CAS:65-46-3; DrugBank:DB02097; Gmelin:84763; HMDB:HMDB0000089; KEGG:C00475; KEGG:D07769
xref_mesh: MESH:D003562
xref: MetaCyc:CYTIDINE; PDBeChem:CTN; PMID:12591866; PMID:15621516; PMID:19194376; Reaxys:89173; Wikipedia:Cytidine
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Adora1
adenosine A1 receptor
increases activity
EXP
Cytidine results in increased activity of ADORA1 protein
CTD
PMID:18313046
NCBI chr13:45,658,872...45,695,821
Ensembl chr13:45,658,872...45,695,801
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Adora2a
adenosine A2a receptor
increases activity
EXP
Cytidine results in increased activity of ADORA2A protein
CTD
PMID:18313046
NCBI chr20:13,315,848...13,333,386
Ensembl chr20:13,315,853...13,333,386
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Ccl5
C-C motif chemokine ligand 5
multiple interactions
ISO
[Chlorine binds to Cytidine] which results in decreased expression of CCL5 mRNA
CTD
PMID:31066272
NCBI chr10:68,322,826...68,327,380
Ensembl chr10:68,322,829...68,327,377
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Gypa
glycophorin A
multiple interactions
ISO
Cytidine inhibits the reaction [teriflunomide results in increased expression of GYPA protein]
CTD
PMID:12181422
NCBI chr19:27,450,304...27,465,940
Ensembl chr19:27,450,308...27,465,822
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Idh2
isocitrate dehydrogenase (NADP(+)) 2
increases abundance multiple interactions
ISO
IDH2 protein mutant form results in increased abundance of Cytidine Triazines inhibits the reaction [IDH2 protein mutant form results in increased abundance of Cytidine]
CTD
PMID:27469509
NCBI chr 1:134,038,644...134,057,969
Ensembl chr 1:134,029,772...134,058,025
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Il1b
interleukin 1 beta
multiple interactions
ISO
[Chlorine binds to Cytidine] which results in increased expression of IL1B mRNA; [Chlorine binds to Cytidine] which results in increased expression of IL1B protein
CTD
PMID:31066272
NCBI chr 3:116,577,005...116,583,386
Ensembl chr 3:116,577,010...116,583,415
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Slc28a1
solute carrier family 28 member 1
multiple interactions increases transport
ISO
Cytidine inhibits the reaction [SLC28A1 protein results in increased uptake of Uridine] SLC28A1 protein results in increased transport of Cytidine
CTD
PMID:9124315 PMID:10772724
NCBI chr 1:135,079,375...135,122,791
Ensembl chr 1:135,081,385...135,122,464
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Slc29a1
solute carrier family 29 member 1
multiple interactions
ISO EXP
Cytidine inhibits the reaction [SLC29A1 protein results in increased uptake of Uridine]
CTD
PMID:9353301 PMID:11085929
NCBI chr 9:15,399,661...15,414,203
Ensembl chr 9:15,399,612...15,414,203
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Slc29a2
solute carrier family 29 member 2
multiple interactions
ISO
Cytidine inhibits the reaction [SLC29A2 protein results in increased uptake of Uridine]
CTD
PMID:11085929
NCBI chr 1:202,327,641...202,335,185
Ensembl chr 1:202,327,354...202,335,171
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Upp1
uridine phosphorylase 1
increases metabolic processing
ISO
UPP1 protein results in increased metabolism of Cytidine
CTD
PMID:15772079
NCBI chr14:83,809,495...83,829,299
Ensembl chr14:83,809,960...83,829,462
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Aars1
alanyl-tRNA synthetase 1
increases expression
ISO
N(4)-hydroxycytidine results in increased expression of AARS mRNA
CTD
PMID:37748715
NCBI chr19:38,999,130...39,021,152
Ensembl chr19:38,999,163...39,021,147
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Abcf3
ATP binding cassette subfamily F member 3
decreases expression
ISO
N(4)-hydroxycytidine results in decreased expression of ABCF3 mRNA
CTD
PMID:37748715
NCBI chr11:80,340,476...80,352,211
Ensembl chr11:80,339,977...80,352,211
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Ace
angiotensin I converting enzyme
decreases expression
ISO
N(4)-hydroxycytidine results in decreased expression of ACE mRNA
CTD
PMID:37748715
NCBI chr10:90,910,316...90,930,437
Ensembl chr10:90,910,316...90,931,131
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Adap2
ArfGAP with dual PH domains 2
decreases expression
ISO
N(4)-hydroxycytidine results in decreased expression of ADAP2 mRNA
CTD
PMID:37748715
NCBI chr10:65,138,006...65,166,147
Ensembl chr10:65,138,020...65,165,604
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Adgra2
adhesion G protein-coupled receptor A2
decreases expression
ISO
N(4)-hydroxycytidine results in decreased expression of ADGRA2 mRNA
CTD
PMID:37748715
NCBI chr16:64,932,964...64,971,433
Ensembl chr16:64,933,315...64,971,483
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Adgra3
adhesion G protein-coupled receptor A3
decreases expression
ISO
N(4)-hydroxycytidine results in decreased expression of ADGRA3 mRNA
CTD
PMID:37748715
NCBI chr14:60,874,719...60,976,341
Ensembl chr14:60,874,715...60,976,332
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Adgrg1
adhesion G protein-coupled receptor G1
decreases expression
ISO
N(4)-hydroxycytidine results in decreased expression of ADGRG1 mRNA
CTD
PMID:37748715
NCBI chr19:10,003,963...10,041,122
Ensembl chr19:10,003,975...10,041,108
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Akirin1
akirin 1
decreases expression
ISO
N(4)-hydroxycytidine results in decreased expression of AKIRIN1 mRNA
CTD
PMID:37748715
NCBI chr 5:135,989,378...136,004,782
Ensembl chr 5:135,989,465...136,004,762
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Aldh18a1
aldehyde dehydrogenase 18 family, member A1
increases expression
ISO
N(4)-hydroxycytidine results in increased expression of ALDH18A1 mRNA
CTD
PMID:37748715
NCBI chr 1:239,375,657...239,407,956
Ensembl chr 1:239,375,669...239,407,890
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Alkbh5
alkB homolog 5, RNA demethylase
decreases expression
ISO
N(4)-hydroxycytidine results in decreased expression of ALKBH5 mRNA
CTD
PMID:37748715
NCBI chr10:45,344,888...45,366,331
Ensembl chr10:45,343,395...45,366,331
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Apbb1ip
amyloid beta precursor protein binding family B member 1 interacting protein
decreases expression
ISO
N(4)-hydroxycytidine results in decreased expression of APBB1IP mRNA
CTD
PMID:37748715
NCBI chr17:84,941,404...85,033,020
Ensembl chr17:84,982,243...85,033,010
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Apela
apelin receptor early endogenous ligand
decreases expression
ISO
N(4)-hydroxycytidine results in decreased expression of APELA mRNA
CTD
PMID:37748715
NCBI chr16:24,694,356...24,703,466
Ensembl chr16:24,694,324...24,703,465
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Arih2
ariadne RBR E3 ubiquitin protein ligase 2
decreases expression
ISO
N(4)-hydroxycytidine results in decreased expression of ARIH2 mRNA
CTD
PMID:37748715
NCBI chr 8:109,296,738...109,355,909
Ensembl chr 8:109,296,738...109,355,852
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Arl14ep
ADP-ribosylation factor like GTPase 14 effector protein
decreases expression
ISO
N(4)-hydroxycytidine results in decreased expression of ARL14EP mRNA
CTD
PMID:37748715
NCBI chr 3:93,441,952...93,454,282
Ensembl chr 3:93,443,183...93,454,155
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Arnt
aryl hydrocarbon receptor nuclear translocator
decreases expression
ISO
N(4)-hydroxycytidine results in decreased expression of ARNT mRNA
CTD
PMID:37748715
NCBI chr 2:182,997,731...183,056,584
Ensembl chr 2:182,997,736...183,056,580
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Arrdc4
arrestin domain containing 4
decreases expression
ISO
N(4)-hydroxycytidine results in decreased expression of ARRDC4 mRNA
CTD
PMID:37748715
NCBI chr 1:122,369,355...122,383,351
Ensembl chr 1:122,369,360...122,383,290
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Asb8
ankyrin repeat and SOCS box-containing 8
decreases expression
ISO
N(4)-hydroxycytidine results in decreased expression of ASB8 mRNA
CTD
PMID:37748715
NCBI chr 7:129,261,397...129,297,492
Ensembl chr 7:129,261,397...129,297,485
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Asns
asparagine synthetase (glutamine-hydrolyzing)
increases expression multiple interactions
ISO
N(4)-hydroxycytidine results in increased expression of ASNS mRNA 4-nitrobenzylthioinosine inhibits the reaction [N(4)-hydroxycytidine results in increased expression of ASNS mRNA]
CTD
PMID:37748715
NCBI chr 4:35,784,995...35,803,474
Ensembl chr 4:35,785,237...35,803,423
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Ate1
arginyltransferase 1
decreases expression
ISO
N(4)-hydroxycytidine results in decreased expression of ATE1 mRNA
CTD
PMID:37748715
NCBI chr 1:184,961,548...185,081,112
Ensembl chr 1:184,963,562...185,080,908
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Atf2
activating transcription factor 2
decreases expression
ISO
N(4)-hydroxycytidine results in decreased expression of ATF2 mRNA
CTD
PMID:37748715
NCBI chr 3:58,718,323...58,795,280
Ensembl chr 3:58,718,332...58,795,236
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Atf3
activating transcription factor 3
increases expression
ISO
N(4)-hydroxycytidine results in increased expression of ATF3 mRNA
CTD
PMID:37748715
NCBI chr13:102,751,278...102,800,520
Ensembl chr13:102,751,321...102,764,631
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Atf4
activating transcription factor 4
decreases expression
ISO
N(4)-hydroxycytidine results in decreased expression of ATF4 mRNA
CTD
PMID:37748715
NCBI chr 7:111,804,135...111,806,457
Ensembl chr 7:111,804,183...111,806,446
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Atf5
activating transcription factor 5
decreases expression
ISO
N(4)-hydroxycytidine results in decreased expression of ATF5 mRNA
CTD
PMID:37748715
NCBI chr 1:95,295,602...95,299,755
Ensembl chr 1:95,295,610...95,299,707
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Atf6
activating transcription factor 6
decreases expression
ISO
N(4)-hydroxycytidine results in decreased expression of ATF6 mRNA
CTD
PMID:37748715
NCBI chr13:82,927,579...83,106,381
Ensembl chr13:82,930,034...83,107,177
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Aup1
AUP1, lipid droplet regulating VLDL assembly factor
decreases expression
ISO
N(4)-hydroxycytidine results in decreased expression of AUP1 mRNA
CTD
PMID:37748715
NCBI chr 4:115,560,274...115,563,346
Ensembl chr 4:115,560,261...115,563,346
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Avil
advillin
decreases expression
ISO
N(4)-hydroxycytidine results in decreased expression of AVIL mRNA
CTD
PMID:37748715
NCBI chr 7:62,825,459...62,844,103
Ensembl chr 7:62,826,025...62,844,071
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B3galnt1
beta-1,3-N-acetylgalactosaminyltransferase 1 (globoside blood group)
decreases expression
ISO
N(4)-hydroxycytidine results in decreased expression of B3GALNT1 mRNA
CTD
PMID:37748715
NCBI chr 2:153,847,297...153,877,371
Ensembl chr 2:153,846,474...153,877,332
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Bbx
BBX high mobility group box domain containing
decreases expression
ISO
N(4)-hydroxycytidine results in decreased expression of BBX mRNA
CTD
PMID:37748715
NCBI chr11:50,381,249...50,628,934
Ensembl chr11:50,381,247...50,623,251
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Bglap
bone gamma-carboxyglutamate protein
decreases expression
ISO
N(4)-hydroxycytidine results in decreased expression of BGLAP mRNA
CTD
PMID:37748715
NCBI chr 2:173,838,518...173,839,495
Ensembl chr 2:173,838,518...173,839,495
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Brms1l
BRMS1 like transcriptional repressor
decreases expression
ISO
N(4)-hydroxycytidine results in decreased expression of BRMS1L mRNA
CTD
PMID:37748715
NCBI chr 6:73,266,673...73,300,630
Ensembl chr 6:73,266,691...73,300,631
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Calml4
calmodulin-like 4
decreases expression
ISO
N(4)-hydroxycytidine results in decreased expression of CALML4 mRNA
CTD
PMID:37748715
NCBI chr 8:63,323,426...63,335,234
Ensembl chr 8:63,323,351...63,335,234
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Carhsp1
calcium regulated heat stable protein 1
decreases expression
ISO
N(4)-hydroxycytidine results in decreased expression of CARHSP1 mRNA
CTD
PMID:37748715
NCBI chr10:6,946,036...6,960,556
Ensembl chr10:6,946,959...7,020,019
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Cars1
cysteinyl-tRNA synthetase 1
increases expression
ISO
N(4)-hydroxycytidine results in increased expression of CARS mRNA
CTD
PMID:37748715
NCBI chr 1:198,753,689...198,796,016
Ensembl chr 1:198,753,691...198,795,941
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Cbx7
chromobox 7
decreases expression
ISO
N(4)-hydroxycytidine results in decreased expression of CBX7 mRNA
CTD
PMID:37748715
NCBI chr 7:111,460,656...111,479,231
Ensembl chr 7:111,460,656...111,477,973
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Ccnb2
cyclin B2
decreases expression
ISO
N(4)-hydroxycytidine results in decreased expression of CCNB2 mRNA
CTD
PMID:37748715
NCBI chr 8:71,087,594...71,100,794
Ensembl chr 8:71,087,595...71,100,874
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Cd68
Cd68 molecule
decreases expression
ISO
N(4)-hydroxycytidine results in decreased expression of CD68 mRNA
CTD
PMID:37748715
NCBI chr10:54,381,814...54,383,693
Ensembl chr10:54,381,815...54,383,697
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Cdca3
cell division cycle associated 3
decreases expression
ISO
N(4)-hydroxycytidine results in decreased expression of CDCA3 mRNA
CTD
PMID:37748715
NCBI chr 4:157,634,775...157,638,799
Ensembl chr 4:157,634,928...157,638,799
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Cebpg
CCAAT/enhancer binding protein gamma
decreases expression
ISO
N(4)-hydroxycytidine results in decreased expression of CEBPG mRNA
CTD
PMID:37748715
NCBI chr 1:87,683,060...87,692,772
Ensembl chr 1:87,684,019...87,694,569
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Cep170
centrosomal protein 170
decreases expression
ISO
N(4)-hydroxycytidine results in decreased expression of CEP170 mRNA
CTD
PMID:37748715
NCBI chr13:88,669,672...88,754,011
Ensembl chr13:88,670,358...88,732,226
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Chac1
ChaC glutathione-specific gamma-glutamylcyclotransferase 1
multiple interactions increases expression
ISO
4-nitrobenzylthioinosine inhibits the reaction [N(4)-hydroxycytidine results in increased expression of CHAC1 mRNA]
CTD
PMID:37748715
NCBI chr 3:106,342,302...106,345,526
Ensembl chr 3:106,342,302...106,345,526
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Coa7
cytochrome c oxidase assembly factor 7
decreases expression
ISO
N(4)-hydroxycytidine results in decreased expression of COA7 mRNA
CTD
PMID:37748715
NCBI chr 5:123,069,356...123,080,942
Ensembl chr 5:123,069,371...123,080,199
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Commd5
COMM domain containing 5
decreases expression
ISO
N(4)-hydroxycytidine results in decreased expression of COMMD5 mRNA
CTD
PMID:37748715
NCBI chr 7:108,621,766...108,623,616
Ensembl chr 7:108,598,673...108,624,764
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Cox6a2
cytochrome c oxidase subunit 6A2
decreases expression
ISO
N(4)-hydroxycytidine results in decreased expression of COX6A2 mRNA
CTD
PMID:37748715
NCBI chr 1:182,788,528...182,790,746
Ensembl chr 1:182,788,528...182,789,274
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Cpt1a
carnitine palmitoyltransferase 1A
decreases expression
ISO
N(4)-hydroxycytidine results in decreased expression of CPT1A mRNA
CTD
PMID:37748715
NCBI chr 1:200,564,634...200,627,059
Ensembl chr 1:200,565,613...200,627,055
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Cryzl1
crystallin zeta like 1
decreases expression
ISO
N(4)-hydroxycytidine results in decreased expression of CRYZL1 mRNA
CTD
PMID:37748715
NCBI chr11:30,933,140...30,977,936
Ensembl chr11:30,933,144...30,977,867
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Csf3r
colony stimulating factor 3 receptor
decreases expression
ISO
N(4)-hydroxycytidine results in decreased expression of CSF3R mRNA
CTD
PMID:37748715
NCBI chr 5:138,298,605...138,318,224
Ensembl chr 5:138,301,506...138,317,881
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Ctps2
CTP synthase 2
decreases expression
ISO
N(4)-hydroxycytidine results in decreased expression of CTPS2 mRNA
CTD
PMID:37748715
NCBI chr X:31,645,873...31,786,733
Ensembl chr X:31,645,873...31,786,733
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Cyb5b
cytochrome b5 type B
multiple interactions
ISO
[CYB5B protein co-treated with CYB5R3 protein co-treated with MTARC1 protein] results in increased reduction of N(4)-hydroxycytidine; [CYB5B protein co-treated with CYB5R3 protein co-treated with MTARC2 protein] results in increased reduction of N(4)-hydroxycytidine
CTD
PMID:22924387
NCBI chr19:35,062,871...35,096,741
Ensembl chr19:35,062,813...35,098,249
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Cyb5r3
cytochrome b5 reductase 3
multiple interactions
ISO
[CYB5B protein co-treated with CYB5R3 protein co-treated with MTARC1 protein] results in increased reduction of N(4)-hydroxycytidine; [CYB5B protein co-treated with CYB5R3 protein co-treated with MTARC2 protein] results in increased reduction of N(4)-hydroxycytidine
CTD
PMID:22924387
NCBI chr 7:114,306,686...114,324,247
Ensembl chr 7:114,306,685...114,324,298
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Dcaf15
DDB1 and CUL4 associated factor 15
decreases expression
ISO
N(4)-hydroxycytidine results in decreased expression of DCAF15 mRNA
CTD
PMID:37748715
NCBI chr19:24,053,925...24,061,277
Ensembl chr19:24,053,925...24,061,277
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Ddhd2
DDHD domain containing 2
decreases expression
ISO
N(4)-hydroxycytidine results in decreased expression of DDHD2 mRNA
CTD
PMID:37748715
NCBI chr16:66,319,469...66,349,025
Ensembl chr16:66,319,466...66,349,023
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Ddit3
DNA-damage inducible transcript 3
multiple interactions increases expression
ISO
4-nitrobenzylthioinosine inhibits the reaction [N(4)-hydroxycytidine results in increased expression of DDIT3 mRNA]
CTD
PMID:37748715
NCBI chr 7:63,115,645...63,121,203
Ensembl chr 7:63,116,380...63,121,201
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Ddit4
DNA-damage-inducible transcript 4
increases expression
ISO
N(4)-hydroxycytidine results in increased expression of DDIT4 mRNA
CTD
PMID:37748715
NCBI chr20:27,891,989...27,894,088
Ensembl chr20:27,891,998...27,894,105
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Ddx19b
DEAD-box helicase 19B
decreases expression
ISO
N(4)-hydroxycytidine results in decreased expression of DDX19B mRNA
CTD
PMID:37748715
NCBI chr19:38,968,215...38,998,907
Ensembl chr19:38,968,215...38,997,259
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Ddx4
DEAD-box helicase 4
decreases expression
ISO
N(4)-hydroxycytidine results in decreased expression of DDX4 mRNA
CTD
PMID:37748715
NCBI chr 2:44,227,946...44,282,867
Ensembl chr 2:44,227,946...44,282,723
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Def8
differentially expressed in FDCP 8 homolog
decreases expression
ISO
N(4)-hydroxycytidine results in decreased expression of DEF8 mRNA
CTD
PMID:37748715
NCBI chr19:51,474,783...51,495,638
Ensembl chr19:51,474,878...51,495,638
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Dnajc5g
DnaJ heat shock protein family (Hsp40) member C5 gamma
decreases expression
ISO
N(4)-hydroxycytidine results in decreased expression of DNAJC5G mRNA
CTD
PMID:37748715
NCBI chr 6:25,260,087...25,264,251
Ensembl chr 6:25,260,088...25,264,152
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Dnmt1
DNA methyltransferase 1
decreases expression
ISO
N(4)-hydroxycytidine results in decreased expression of DNMT1 mRNA
CTD
PMID:37748715
NCBI chr 8:19,440,611...19,486,659
Ensembl chr 8:19,440,611...19,486,659
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Dusp11
dual specificity phosphatase 11
decreases expression
ISO
N(4)-hydroxycytidine results in decreased expression of DUSP11 mRNA
CTD
PMID:37748715
NCBI chr 4:118,367,673...118,385,183
Ensembl chr 4:118,368,053...118,385,181
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Dusp16
dual specificity phosphatase 16
decreases expression
ISO
N(4)-hydroxycytidine results in decreased expression of DUSP16 mRNA
CTD
PMID:37748715
NCBI chr 4:167,546,780...167,630,173
Ensembl chr 4:167,548,155...167,629,980
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Dusp19
dual specificity phosphatase 19
decreases expression
ISO
N(4)-hydroxycytidine results in decreased expression of DUSP19 mRNA
CTD
PMID:37748715
NCBI chr 3:65,538,424...65,554,465
Ensembl chr 3:65,538,420...65,553,534
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Dynll1
dynein light chain LC8-type 1
decreases expression
ISO
N(4)-hydroxycytidine results in decreased expression of DYNLL1 mRNA
CTD
PMID:37748715
NCBI chr12:41,312,365...41,316,157
Ensembl chr12:41,312,367...41,314,741
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Dyrk4
dual specificity tyrosine phosphorylation regulated kinase 4
decreases expression
ISO
N(4)-hydroxycytidine results in decreased expression of DYRK4 mRNA
CTD
PMID:37748715
NCBI chr 4:159,715,658...159,757,660
Ensembl chr 4:159,715,417...159,757,627
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E2f8
E2F transcription factor 8
decreases expression
ISO
N(4)-hydroxycytidine results in decreased expression of E2F8 mRNA
CTD
PMID:37748715
NCBI chr 1:98,565,717...98,584,265
Ensembl chr 1:98,565,717...98,584,098
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Eif4ebp1
eukaryotic translation initiation factor 4E binding protein 1
decreases expression
ISO
N(4)-hydroxycytidine results in decreased expression of EIF4EBP1 mRNA
CTD
PMID:37748715
NCBI chr16:64,792,595...64,805,984
Ensembl chr16:64,790,226...64,805,984
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Elf1
E74 like ETS transcription factor 1
decreases expression
ISO
N(4)-hydroxycytidine results in decreased expression of ELF1 mRNA
CTD
PMID:37748715
NCBI chr15:54,890,644...54,986,721
Ensembl chr15:54,865,616...54,986,699
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Emc9
ER membrane protein complex subunit 9
decreases expression
ISO
N(4)-hydroxycytidine results in decreased expression of EMC9 mRNA
CTD
PMID:37748715
NCBI chr15:29,071,881...29,076,098
Ensembl chr15:29,071,883...29,076,098
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Enpep
glutamyl aminopeptidase
decreases expression
ISO
N(4)-hydroxycytidine results in decreased expression of ENPEP mRNA
CTD
PMID:37748715
NCBI chr 2:217,781,985...217,851,947
Ensembl chr 2:217,782,005...217,851,947
G
Epb41l5
erythrocyte membrane protein band 4.1 like 5
decreases expression
ISO
N(4)-hydroxycytidine results in decreased expression of EPB41L5 mRNA
CTD
PMID:37748715
NCBI chr13:30,670,792...30,770,213
Ensembl chr13:30,669,764...30,768,360
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Exosc6
exosome component 6
increases expression
ISO
N(4)-hydroxycytidine results in increased expression of EXOSC6 mRNA
CTD
PMID:37748715
NCBI chr19:39,022,171...39,023,585
Ensembl chr19:39,022,183...39,023,515
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Fam98a
family with sequence similarity 98, member A
decreases expression
ISO
N(4)-hydroxycytidine results in decreased expression of FAM98A mRNA
CTD
PMID:37748715
NCBI chr 6:19,874,082...19,888,744
Ensembl chr 6:19,874,071...19,888,742
G
Fanca
FA complementation group A
decreases expression
ISO
N(4)-hydroxycytidine results in decreased expression of FANCA mRNA
CTD
PMID:37748715
NCBI chr19:51,304,126...51,362,586
Ensembl chr19:51,304,021...51,362,527
G
Fbxl12
F-box and leucine-rich repeat protein 12
decreases expression
ISO
N(4)-hydroxycytidine results in decreased expression of FBXL12 mRNA
CTD
PMID:37748715
NCBI chr 8:19,175,864...19,183,373
Ensembl chr 8:19,160,352...19,183,607
G
Fbxo5
F-box protein 5
decreases expression
ISO
N(4)-hydroxycytidine results in decreased expression of FBXO5 mRNA
CTD
PMID:37748715
NCBI chr 1:42,196,068...42,202,437
Ensembl chr 1:42,196,068...42,202,437
G
Fetub
fetuin B
decreases expression
ISO
N(4)-hydroxycytidine results in decreased expression of FETUB mRNA
CTD
PMID:37748715
NCBI chr11:78,082,158...78,093,022
Ensembl chr11:78,082,156...78,095,135
G
Fhip2b
FHF complex subunit HOOK interacting protein 2B
decreases expression
ISO
N(4)-hydroxycytidine results in decreased expression of FHIP2B mRNA
CTD
PMID:37748715
NCBI chr15:45,656,641...45,674,603
Ensembl chr15:45,656,647...45,674,105
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Foxk2
forkhead box K2
decreases expression
ISO
N(4)-hydroxycytidine results in decreased expression of FOXK2 mRNA
CTD
PMID:37748715
NCBI chr10:106,542,643...106,592,569
Ensembl chr10:106,542,566...106,592,563
G
Fzd4
frizzled class receptor 4
decreases expression
ISO
N(4)-hydroxycytidine results in decreased expression of FZD4 mRNA
CTD
PMID:37748715
NCBI chr 1:143,279,934...143,288,799
Ensembl chr 1:143,280,065...143,285,724
G
Gadd45a
growth arrest and DNA-damage-inducible, alpha
decreases expression
ISO
N(4)-hydroxycytidine results in decreased expression of GADD45A mRNA
CTD
PMID:37748715
NCBI chr 4:96,154,789...96,157,091
Ensembl chr 4:96,154,789...96,157,115
G
Gars1
glycyl-tRNA synthetase 1
decreases expression
ISO
N(4)-hydroxycytidine results in decreased expression of GARS mRNA
CTD
PMID:37748715
NCBI chr 4:84,171,596...84,212,609
Ensembl chr 4:84,171,596...84,212,609
G
Gas2
growth arrest-specific 2
decreases expression
ISO
N(4)-hydroxycytidine results in decreased expression of GAS2 mRNA
CTD
PMID:37748715
NCBI chr 1:101,452,361...101,582,619
Ensembl chr 1:101,482,591...101,582,619
G
Gdf15
growth differentiation factor 15
decreases expression
ISO
N(4)-hydroxycytidine results in decreased expression of GDF15 mRNA
CTD
PMID:37748715
NCBI chr16:18,804,457...18,808,043
Ensembl chr16:18,805,239...18,808,055
G
Gid4
GID complex subunit 4
decreases expression
ISO
N(4)-hydroxycytidine results in decreased expression of GID4 mRNA
CTD
PMID:37748715
NCBI chr10:45,221,556...45,247,627
Ensembl chr10:45,245,754...45,247,621 Ensembl chr10:45,245,754...45,247,621
G
Glb1
galactosidase, beta 1
decreases expression
ISO
N(4)-hydroxycytidine results in decreased expression of GLB1 mRNA
CTD
PMID:37748715
NCBI chr 8:114,085,508...114,158,127
Ensembl chr 8:114,085,508...114,158,127
G
Gpt2
glutamic--pyruvic transaminase 2
decreases expression
ISO
N(4)-hydroxycytidine results in decreased expression of GPT2 mRNA
CTD
PMID:37748715
NCBI chr19:21,526,800...21,561,314
Ensembl chr19:21,517,621...21,560,610
G
Grb10
growth factor receptor bound protein 10
increases expression
ISO
N(4)-hydroxycytidine results in increased expression of GRB10 mRNA
CTD
PMID:37748715
NCBI chr14:86,495,051...86,602,800
Ensembl chr14:86,495,054...86,602,806
G
Grcc10
gene rich cluster, C10 gene
decreases expression
ISO
N(4)-hydroxycytidine results in decreased expression of GRCC10 mRNA
CTD
PMID:37748715
NCBI chr 4:157,551,276...157,552,924
G
Hadha
hydroxyacyl-CoA dehydrogenase trifunctional multienzyme complex subunit alpha
decreases expression
ISO
N(4)-hydroxycytidine results in decreased expression of HADHA mRNA
CTD
PMID:37748715
NCBI chr 6:26,187,969...26,227,605
Ensembl chr 6:26,187,956...26,227,869
G
Hadhb
hydroxyacyl-CoA dehydrogenase trifunctional multienzyme complex subunit beta
decreases expression
ISO
N(4)-hydroxycytidine results in decreased expression of HADHB mRNA
CTD
PMID:37748715
NCBI chr 6:26,153,572...26,187,668
Ensembl chr 6:26,153,578...26,184,869
G
Hax1
HCLS1 associated protein X-1
decreases expression
ISO
N(4)-hydroxycytidine results in decreased expression of HAX1 mRNA
CTD
PMID:37748715
NCBI chr 2:175,434,242...175,437,926
Ensembl chr 2:175,434,238...175,437,714
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Helz
helicase with zinc finger
decreases expression
ISO
N(4)-hydroxycytidine results in decreased expression of HELZ mRNA
CTD
PMID:37748715
NCBI chr10:92,479,403...92,645,234
Ensembl chr10:92,501,518...92,638,383
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Herpud1
homocysteine inducible ER protein with ubiquitin like domain 1
increases expression multiple interactions
ISO
N(4)-hydroxycytidine results in increased expression of HERPUD1 mRNA 4-nitrobenzylthioinosine inhibits the reaction [N(4)-hydroxycytidine results in increased expression of HERPUD1 mRNA]
CTD
PMID:37748715
NCBI chr19:10,598,411...10,609,002
Ensembl chr19:10,598,417...10,618,424
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Herpud2
HERPUD family member 2
decreases expression
ISO
N(4)-hydroxycytidine results in decreased expression of HERPUD2 mRNA
CTD
PMID:37748715
NCBI chr 8:23,573,374...23,618,380
Ensembl chr 8:23,573,379...23,617,874
G
Hexa
hexosaminidase subunit alpha
decreases expression
ISO
N(4)-hydroxycytidine results in decreased expression of HEXA mRNA
CTD
PMID:37748715
NCBI chr 8:59,936,526...59,961,654
Ensembl chr 8:59,936,660...59,962,013
G
Hexim1
HEXIM P-TEFb complex subunit 1
decreases expression
ISO
N(4)-hydroxycytidine results in decreased expression of HEXIM1 mRNA
CTD
PMID:37748715
NCBI chr10:88,062,808...88,064,920
Ensembl chr10:88,062,803...88,066,189
G
Hmox1
heme oxygenase 1
decreases expression
ISO
N(4)-hydroxycytidine results in decreased expression of HMOX1 mRNA
CTD
PMID:37748715
NCBI chr19:13,466,287...13,474,082
Ensembl chr19:13,467,244...13,474,079
G
Iars1
isoleucyl-tRNA synthetase 1
decreases expression
ISO
N(4)-hydroxycytidine results in decreased expression of IARS mRNA
CTD
PMID:37748715
NCBI chr17:14,940,919...14,987,277
Ensembl chr17:14,940,924...14,987,237
G
Id2
inhibitor of DNA binding 2
decreases expression
ISO
N(4)-hydroxycytidine results in decreased expression of ID2 mRNA
CTD
PMID:37748715
NCBI chr 6:41,740,556...41,742,393
Ensembl chr 6:41,728,946...41,744,400
G
Inip
INTS3 and NABP interacting protein
decreases expression
ISO
N(4)-hydroxycytidine results in decreased expression of INIP mRNA
CTD
PMID:37748715
NCBI chr 5:74,648,392...74,662,628
Ensembl chr 5:74,648,392...74,662,628
G
Irak1bp1
interleukin-1 receptor-associated kinase 1 binding protein 1
decreases expression
ISO
N(4)-hydroxycytidine results in decreased expression of IRAK1BP1 mRNA
CTD
PMID:37748715
NCBI chr 8:83,731,512...83,748,289
Ensembl chr 8:83,731,507...83,748,289
G
Irf2bp2
interferon regulatory factor 2 binding protein 2
decreases expression
ISO
N(4)-hydroxycytidine results in decreased expression of IRF2BP2 mRNA
CTD
PMID:37748715
NCBI chr19:54,559,417...54,565,096
Ensembl chr19:54,560,128...54,566,642
G
Jam3
junctional adhesion molecule 3
decreases expression
ISO
N(4)-hydroxycytidine results in decreased expression of JAM3 mRNA
CTD
PMID:37748715
NCBI chr 8:25,508,461...25,569,306
Ensembl chr 8:25,507,057...25,569,355
G
Jdp2
Jun dimerization protein 2
decreases expression
ISO
N(4)-hydroxycytidine results in decreased expression of JDP2 mRNA
CTD
PMID:37748715
NCBI chr 6:105,261,619...105,302,386
Ensembl chr 6:105,261,373...105,301,485
G
Lgals1
galectin 1
multiple interactions decreases expression
ISO
4-nitrobenzylthioinosine inhibits the reaction [N(4)-hydroxycytidine results in decreased expression of LGALS1 mRNA]
CTD
PMID:37748715
NCBI chr 7:110,485,239...110,488,345
Ensembl chr 7:110,481,392...110,488,345
G
Lig1
DNA ligase 1
decreases expression
ISO
N(4)-hydroxycytidine results in decreased expression of LIG1 mRNA
CTD
PMID:37748715
NCBI chr 1:74,165,688...74,204,400
Ensembl chr 1:74,165,842...74,204,413
G
Lrfn1
leucine rich repeat and fibronectin type III domain containing 1
decreases expression
ISO
N(4)-hydroxycytidine results in decreased expression of LRFN1 mRNA
CTD
PMID:37748715
NCBI chr 1:83,742,442...83,761,450
Ensembl chr 1:83,682,964...83,761,449
G
Lyrm7
LYR motif containing 7
decreases expression
ISO
N(4)-hydroxycytidine results in decreased expression of LYRM7 mRNA
CTD
PMID:37748715
NCBI chr10:38,964,299...38,983,628
Ensembl chr10:38,964,311...38,983,601
G
Map2k5
mitogen activated protein kinase kinase 5
decreases expression
ISO
N(4)-hydroxycytidine results in decreased expression of MAP2K5 mRNA
CTD
PMID:37748715
NCBI chr 8:63,625,220...63,852,090
Ensembl chr 8:63,625,221...63,851,983
G
Mapre3
microtubule-associated protein, RP/EB family, member 3
decreases expression
ISO
N(4)-hydroxycytidine results in decreased expression of MAPRE3 mRNA
CTD
PMID:37748715
NCBI chr 6:25,513,800...25,558,876
Ensembl chr 6:25,513,800...25,558,881
G
Mcam
melanoma cell adhesion molecule
decreases expression
ISO
N(4)-hydroxycytidine results in decreased expression of MCAM mRNA
CTD
PMID:37748715
NCBI chr 8:44,479,391...44,487,575
Ensembl chr 8:44,479,376...44,487,571
G
Mdh1
malate dehydrogenase 1
decreases expression
ISO
N(4)-hydroxycytidine results in decreased expression of MDH1 mRNA
CTD
PMID:37748715
NCBI chr14:95,630,625...95,645,920
Ensembl chr14:95,630,306...95,645,925
G
Midn
midnolin
decreases expression
ISO
N(4)-hydroxycytidine results in decreased expression of MIDN mRNA
CTD
PMID:37748715
NCBI chr 7:9,548,100...9,559,605
Ensembl chr 7:9,549,650...9,559,752
G
Mknk1
MAPK interacting serine/threonine kinase 1
decreases expression
ISO
N(4)-hydroxycytidine results in decreased expression of MKNK1 mRNA
CTD
PMID:37748715
NCBI chr 5:129,318,128...129,357,641
Ensembl chr 5:129,318,170...129,357,639
G
Mob4
MOB family member 4, phocein
decreases expression
ISO
N(4)-hydroxycytidine results in decreased expression of MOB4 mRNA
CTD
PMID:37748715
NCBI chr 9:56,617,374...56,641,336
Ensembl chr 9:56,617,368...56,641,329
G
Mrps12
mitochondrial ribosomal protein S12
decreases expression
ISO
N(4)-hydroxycytidine results in decreased expression of MRPS12 mRNA
CTD
PMID:37748715
NCBI chr 1:84,025,896...84,028,896
Ensembl chr 1:84,025,899...84,028,780
G
Mrps27
mitochondrial ribosomal protein S27
decreases expression
ISO
N(4)-hydroxycytidine results in decreased expression of MRPS27 mRNA
CTD
PMID:37748715
NCBI chr 2:30,740,007...30,808,577
Ensembl chr 2:30,740,033...30,808,577
G
Msmo1
methylsterol monooxygenase 1
decreases expression
ISO
N(4)-hydroxycytidine results in decreased expression of MSMO1 mRNA
CTD
PMID:37748715
NCBI chr16:24,980,680...24,997,927
Ensembl chr16:24,980,697...24,998,016
G
Mt2A
metallothionein 2A
decreases expression
ISO
N(4)-hydroxycytidine results in decreased expression of MT2 mRNA
CTD
PMID:37748715
NCBI chr19:10,832,009...10,832,783
Ensembl chr19:10,832,002...10,832,784
G
Mtarc1
mitochondrial amidoxime reducing component 1
multiple interactions
ISO
[CYB5B protein co-treated with CYB5R3 protein co-treated with MTARC1 protein] results in increased reduction of N(4)-hydroxycytidine
CTD
PMID:22924387
NCBI chr13:96,324,377...96,362,677
Ensembl chr13:96,339,757...96,397,796
G
Mtarc2
mitochondrial amidoxime reducing component 2
multiple interactions
ISO
[CYB5B protein co-treated with CYB5R3 protein co-treated with MTARC2 protein] results in increased reduction of N(4)-hydroxycytidine
CTD
PMID:22924387
NCBI chr13:96,362,810...96,397,284
G
Mtbp
MDM2 binding protein
decreases expression
ISO
N(4)-hydroxycytidine results in decreased expression of MTBP mRNA
CTD
PMID:37748715
NCBI chr 7:86,973,215...87,055,775
Ensembl chr 7:86,973,069...87,050,827
G
Mthfd1l
methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like
decreases expression
ISO
N(4)-hydroxycytidine results in decreased expression of MTHFD1L mRNA
CTD
PMID:37748715
NCBI chr 1:40,443,926...40,632,911
Ensembl chr 1:40,444,008...40,632,905
G
Mthfd2
methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase
multiple interactions increases expression
ISO
4-nitrobenzylthioinosine inhibits the reaction [N(4)-hydroxycytidine results in increased expression of MTHFD2 mRNA]
CTD
PMID:37748715
NCBI chr 4:115,811,135...115,822,663
Ensembl chr 4:115,811,139...115,822,608
G
Mtx1
Metaxin 1
decreases expression
ISO
N(4)-hydroxycytidine results in decreased expression of MTX1 mRNA
CTD
PMID:37748715
NCBI chr 2:174,615,460...174,621,383
Ensembl chr 2:174,615,461...174,620,982
G
Myc
MYC proto-oncogene, bHLH transcription factor
decreases expression
ISO
N(4)-hydroxycytidine results in decreased expression of MYC mRNA
CTD
PMID:37748715
NCBI chr 7:93,593,705...93,598,633
Ensembl chr 7:93,593,705...93,598,630
G
Nabp1
nucleic acid binding protein 1
decreases expression
ISO
N(4)-hydroxycytidine results in decreased expression of NABP1 mRNA
CTD
PMID:37748715
NCBI chr 9:50,098,552...50,133,982
Ensembl chr 9:50,126,726...50,134,107
G
Nars1
asparaginyl-tRNA synthetase 1
decreases expression
ISO
N(4)-hydroxycytidine results in decreased expression of NARS mRNA
CTD
PMID:37748715
NCBI chr18:57,989,308...58,005,584
Ensembl chr18:57,989,308...58,005,622
G
Ncapd2
non-SMC condensin I complex, subunit D2
decreases expression
ISO
N(4)-hydroxycytidine results in decreased expression of NCAPD2 mRNA
CTD
PMID:37748715
NCBI chr 4:157,968,814...157,992,314
Ensembl chr 4:157,968,815...157,992,020
G
Ncapg
non-SMC condensin I complex, subunit G
decreases expression
ISO
N(4)-hydroxycytidine results in decreased expression of NCAPG mRNA
CTD
PMID:37748715
NCBI chr14:65,403,930...65,432,902
Ensembl chr14:65,404,163...65,432,902
G
Ncor1
nuclear receptor co-repressor 1
decreases expression
ISO
N(4)-hydroxycytidine results in decreased expression of NCOR1 mRNA
CTD
PMID:37748715
NCBI chr10:46,999,536...47,142,294
Ensembl chr10:46,999,536...47,141,032
G
Nectin1
nectin cell adhesion molecule 1
decreases expression
ISO
N(4)-hydroxycytidine results in decreased expression of PVRL1 mRNA
CTD
PMID:37748715
NCBI chr 8:44,101,776...44,164,863
Ensembl chr 8:44,101,776...44,189,787
G
Nsf
N-ethylmaleimide sensitive factor, vesicle fusing ATPase
decreases expression
ISO
N(4)-hydroxycytidine results in decreased expression of NSF mRNA
CTD
PMID:37748715
NCBI chr10:88,727,912...88,857,375
Ensembl chr10:88,727,912...88,857,386
G
Nsun3
NOP2/Sun RNA methyltransferase 3
decreases expression
ISO
N(4)-hydroxycytidine results in decreased expression of NSUN3 mRNA
CTD
PMID:37748715
NCBI chr11:37,490,832...37,575,607
Ensembl chr11:37,490,838...37,568,543
G
Ntaq1
N-terminal glutamine amidase 1
decreases expression
ISO
N(4)-hydroxycytidine results in decreased expression of WDYHV1 mRNA
CTD
PMID:37748715
NCBI chr 7:89,684,318...89,704,484
Ensembl chr 7:89,684,323...89,704,474
G
Nup85
nucleoporin 85
decreases expression
ISO
N(4)-hydroxycytidine results in decreased expression of NUP85 mRNA
CTD
PMID:37748715
NCBI chr10:100,806,482...100,825,029
Ensembl chr10:100,806,437...100,825,043
G
Nupr1
nuclear protein 1, transcriptional regulator
multiple interactions increases expression
ISO
4-nitrobenzylthioinosine inhibits the reaction [N(4)-hydroxycytidine results in increased expression of NUPR1 mRNA]
CTD
PMID:37748715
NCBI chr 1:181,213,292...181,215,327
Ensembl chr 1:181,213,368...181,215,281
G
Nxf7
nuclear RNA export factor 7
increases expression
ISO
N(4)-hydroxycytidine results in increased expression of NXF2 mRNA
CTD
PMID:37748715
NCBI chr X:98,535,374...98,552,562
Ensembl chr X:98,535,375...98,552,526
G
Ogdh
oxoglutarate dehydrogenase
decreases expression
ISO
N(4)-hydroxycytidine results in decreased expression of OGDH mRNA
CTD
PMID:37748715
NCBI chr14:81,150,021...81,217,479
Ensembl chr14:81,150,091...81,217,479
G
Oip5
Opa interacting protein 5
decreases expression
ISO
N(4)-hydroxycytidine results in decreased expression of OIP5 mRNA
CTD
PMID:37748715
NCBI chr 3:106,593,746...106,603,281
Ensembl chr 3:106,593,760...106,603,250
G
Optn
optineurin
decreases expression
ISO
N(4)-hydroxycytidine results in decreased expression of OPTN mRNA
CTD
PMID:37748715
NCBI chr17:73,209,572...73,260,251
Ensembl chr17:73,209,575...73,260,251
G
Osgepl1
O-sialoglycoprotein endopeptidase-like 1
decreases expression
ISO
N(4)-hydroxycytidine results in decreased expression of OSGEPL1 mRNA
CTD
PMID:37748715
NCBI chr 9:48,214,995...48,229,440
Ensembl chr 9:48,215,402...48,229,388
G
P2rx3
purinergic receptor P2X 3
decreases expression
ISO
N(4)-hydroxycytidine results in decreased expression of P2RX3 mRNA
CTD
PMID:37748715
NCBI chr 3:70,080,850...70,124,664
Ensembl chr 3:70,080,851...70,125,178
G
P2rx7
purinergic receptor P2X 7
increases expression
ISO
N(4)-hydroxycytidine results in increased expression of P2RX7 mRNA
CTD
PMID:37748715
NCBI chr12:33,889,709...33,934,168
Ensembl chr12:33,879,745...33,934,619
G
P4ha2
prolyl 4-hydroxylase subunit alpha 2
decreases expression
ISO
N(4)-hydroxycytidine results in decreased expression of P4HA2 mRNA
CTD
PMID:37748715
NCBI chr10:38,243,136...38,271,983
Ensembl chr10:38,243,139...38,287,314
G
Pak2
p21 (RAC1) activated kinase 2
decreases expression
ISO
N(4)-hydroxycytidine results in decreased expression of PAK2 mRNA
CTD
PMID:37748715
NCBI chr11:68,707,940...68,768,816
Ensembl chr11:68,707,969...68,768,816
G
Pde3a
phosphodiesterase 3A
decreases expression
ISO
N(4)-hydroxycytidine results in decreased expression of PDE3A mRNA
CTD
PMID:37748715
NCBI chr 4:174,172,804...174,443,944
Ensembl chr 4:174,172,868...174,438,274
G
Pde4dip
phosphodiesterase 4D interacting protein
decreases expression
ISO
N(4)-hydroxycytidine results in decreased expression of PDE4DIP mRNA
CTD
PMID:37748715
NCBI chr 2:185,293,236...185,490,100
Ensembl chr 2:185,293,214...185,468,379
G
Pds5b
PDS5 cohesin associated factor B
decreases expression
ISO
N(4)-hydroxycytidine results in decreased expression of PDS5B mRNA
CTD
PMID:37748715
NCBI chr12:202,481...345,596
Ensembl chr12:255,313...345,596
G
Pex1
peroxisomal biogenesis factor 1
decreases expression
ISO
N(4)-hydroxycytidine results in decreased expression of PEX1 mRNA
CTD
PMID:37748715
NCBI chr 4:30,519,950...30,558,953
Ensembl chr 4:30,519,955...30,558,921
G
Pgam2
phosphoglycerate mutase 2
decreases expression
ISO
N(4)-hydroxycytidine results in decreased expression of PGAM2 mRNA
CTD
PMID:37748715
NCBI chr14:80,681,796...80,683,907
Ensembl chr14:80,681,776...80,683,940
G
Pgp
phosphoglycolate phosphatase
decreases expression
ISO
N(4)-hydroxycytidine results in decreased expression of PGP mRNA
CTD
PMID:37748715
NCBI chr10:13,495,232...13,497,858
Ensembl chr10:13,494,291...13,497,858
G
Pmch
pro-melanin-concentrating hormone
decreases expression
ISO
N(4)-hydroxycytidine results in decreased expression of PMCH mRNA
CTD
PMID:37748715
NCBI chr 7:22,511,934...22,513,250
Ensembl chr 7:22,511,934...22,513,250
G
Polr2a
RNA polymerase II subunit A
decreases expression
ISO
N(4)-hydroxycytidine results in decreased expression of POLR2A mRNA
CTD
PMID:37748715
NCBI chr10:54,452,438...54,478,486
Ensembl chr10:54,452,441...54,478,455
G
Ppp1r15a
protein phosphatase 1, regulatory subunit 15A
decreases expression
ISO
N(4)-hydroxycytidine results in decreased expression of PPP1R15A mRNA
CTD
PMID:37748715
NCBI chr 1:96,000,053...96,003,128
Ensembl chr 1:96,000,058...96,003,171
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Ppp1r3c
protein phosphatase 1, regulatory subunit 3C
decreases expression
ISO
N(4)-hydroxycytidine results in decreased expression of PPP1R3C mRNA
CTD
PMID:37748715
NCBI chr 1:234,460,958...234,465,961
Ensembl chr 1:234,460,652...234,465,961
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Psat1
phosphoserine aminotransferase 1
decreases expression
ISO
N(4)-hydroxycytidine results in decreased expression of PSAT1 mRNA
CTD
PMID:37748715
NCBI chr 1:213,196,709...213,218,564
Ensembl chr 1:213,196,709...213,218,682
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Psph
phosphoserine phosphatase
increases expression
ISO
N(4)-hydroxycytidine results in increased expression of PSPH mRNA
CTD
PMID:37748715
NCBI chr12:26,882,524...26,905,084
Ensembl chr12:26,883,133...26,905,074
G
Ptk2
protein tyrosine kinase 2
decreases expression
ISO
N(4)-hydroxycytidine results in decreased expression of PTK2 mRNA
CTD
PMID:37748715
NCBI chr 7:105,126,725...105,331,848
Ensembl chr 7:105,126,728...105,331,783
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Rab21
RAB21, member RAS oncogene family
decreases expression
ISO
N(4)-hydroxycytidine results in decreased expression of RAB21 mRNA
CTD
PMID:37748715
NCBI chr 7:50,904,050...50,928,890
Ensembl chr 7:50,904,057...50,928,839
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Rabggta
Rab geranylgeranyltransferase subunit alpha
decreases expression
ISO
N(4)-hydroxycytidine results in decreased expression of RABGGTA mRNA
CTD
PMID:37748715
NCBI chr15:29,206,328...29,213,398
Ensembl chr15:29,206,157...29,213,348
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Rad54l
RAD54 like
decreases expression
ISO
N(4)-hydroxycytidine results in decreased expression of RAD54L mRNA
CTD
PMID:37748715
NCBI chr 5:129,575,431...129,605,100
Ensembl chr 5:129,575,378...129,605,070
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Reep6
receptor accessory protein 6
increases expression
ISO
N(4)-hydroxycytidine results in increased expression of REEP6 mRNA
CTD
PMID:37748715
NCBI chr 7:9,373,927...9,380,845
Ensembl chr 7:9,373,927...9,380,597
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Rfc2
replication factor C subunit 2
decreases expression
ISO
N(4)-hydroxycytidine results in decreased expression of RFC2 mRNA
CTD
PMID:37748715
NCBI chr12:22,120,449...22,133,576
Ensembl chr12:22,120,010...22,133,557
G
Rhbdd1
rhomboid domain containing 1
decreases expression
ISO
N(4)-hydroxycytidine results in decreased expression of RHBDD1 mRNA
CTD
PMID:37748715
NCBI chr 9:83,630,037...83,748,690
Ensembl chr 9:83,630,063...83,748,689
G
Rragc
Ras-related GTP binding C
decreases expression
ISO
N(4)-hydroxycytidine results in decreased expression of RRAGC mRNA
CTD
PMID:37748715
NCBI chr 5:136,148,239...136,167,773
Ensembl chr 5:136,148,276...136,167,767
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Rspry1
ring finger and SPRY domain containing 1
decreases expression
ISO
N(4)-hydroxycytidine results in decreased expression of RSPRY1 mRNA
CTD
PMID:37748715
NCBI chr19:10,352,449...10,403,015
Ensembl chr19:10,353,821...10,401,102
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Samm50
SAMM50 sorting and assembly machinery component
decreases expression
ISO
N(4)-hydroxycytidine results in decreased expression of SAMM50 mRNA
CTD
PMID:37748715
NCBI chr 7:115,317,472...115,341,682
Ensembl chr 7:115,317,404...115,341,682
G
Sars1
seryl-tRNA synthetase 1
decreases expression
ISO
N(4)-hydroxycytidine results in decreased expression of SARS mRNA
CTD
PMID:37748715
NCBI chr 2:196,065,543...196,081,240
Ensembl chr 2:196,065,430...196,081,277
G
Sema6a
semaphorin 6A
decreases expression
ISO
N(4)-hydroxycytidine results in decreased expression of SEMA6A mRNA
CTD
PMID:37748715
NCBI chr18:40,050,623...40,171,954
Ensembl chr18:40,050,624...40,171,954
G
Sesn1
sestrin 1
decreases expression
ISO
N(4)-hydroxycytidine results in decreased expression of SESN1 mRNA
CTD
PMID:37748715
NCBI chr20:45,294,876...45,387,698
Ensembl chr20:45,294,871...45,387,697
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Sesn2
sestrin 2
decreases expression
ISO
N(4)-hydroxycytidine results in decreased expression of SESN2 mRNA
CTD
PMID:37748715
NCBI chr 5:144,702,287...144,721,241
Ensembl chr 5:144,701,530...144,721,260
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Sh3tc1
SH3 domain and tetratricopeptide repeats 1
decreases expression
ISO
N(4)-hydroxycytidine results in decreased expression of SH3TC1 mRNA
CTD
PMID:37748715
NCBI chr14:75,005,691...75,050,001
Ensembl chr14:75,016,875...75,049,995
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Shmt2
serine hydroxymethyltransferase 2
decreases expression
ISO
N(4)-hydroxycytidine results in decreased expression of SHMT2 mRNA
CTD
PMID:37748715
NCBI chr 7:63,358,961...63,364,293
Ensembl chr 7:63,358,961...63,364,236
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Ska2
spindle and kinetochore associated complex subunit 2
decreases expression
ISO
N(4)-hydroxycytidine results in decreased expression of SKA2 mRNA
CTD
PMID:37748715
NCBI chr10:71,921,474...71,939,461
Ensembl chr10:71,921,582...71,939,458
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Slc1a4
solute carrier family 1 member 4
increases expression
ISO
N(4)-hydroxycytidine results in increased expression of SLC1A4 mRNA
CTD
PMID:37748715
NCBI chr14:94,530,801...94,560,190
Ensembl chr14:94,529,084...94,560,418
G
Slc1a5
solute carrier family 1 member 5
decreases expression
ISO
N(4)-hydroxycytidine results in decreased expression of SLC1A5 mRNA
CTD
PMID:37748715
NCBI chr 1:77,456,849...77,470,952
Ensembl chr 1:77,456,694...77,470,952
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Slc25a31
solute carrier family 25 member 31
decreases expression
ISO
N(4)-hydroxycytidine results in decreased expression of SLC25A31 mRNA
CTD
PMID:37748715
NCBI chr 2:123,695,387...123,711,275
Ensembl chr 2:123,695,408...123,710,795
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Slc25a36
solute carrier family 25 member 36
decreases expression
ISO
N(4)-hydroxycytidine results in decreased expression of SLC25A36 mRNA
CTD
PMID:37748715
NCBI chr 8:97,659,848...97,693,735
Ensembl chr 8:97,662,127...97,693,703
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Slc25a4
solute carrier family 25 member 4
decreases expression
ISO
N(4)-hydroxycytidine results in decreased expression of SLC25A4 mRNA
CTD
PMID:37748715
NCBI chr16:46,072,935...46,076,730
Ensembl chr16:46,072,939...46,076,733
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Slc26a2
solute carrier family 26 member 2
decreases expression
ISO
N(4)-hydroxycytidine results in decreased expression of SLC26A2 mRNA
CTD
PMID:37748715
NCBI chr18:54,648,276...54,666,627
Ensembl chr18:54,652,951...54,666,626
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Slc2a1
solute carrier family 2 member 1
decreases expression
ISO
N(4)-hydroxycytidine results in decreased expression of SLC2A1 mRNA
CTD
PMID:37748715
NCBI chr 5:132,717,196...132,745,416
Ensembl chr 5:132,717,196...132,745,416
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Slc35a4
solute carrier family 35, member A4
decreases expression
ISO
N(4)-hydroxycytidine results in decreased expression of SLC35A4 mRNA
CTD
PMID:37748715
NCBI chr18:28,280,483...28,284,610
Ensembl chr18:28,279,750...28,284,725
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Slc38a1
solute carrier family 38, member 1
decreases expression
ISO
N(4)-hydroxycytidine results in decreased expression of SLC38A1 mRNA
CTD
PMID:37748715
NCBI chr 7:127,733,230...127,802,541
Ensembl chr 7:127,738,226...127,802,218
G
Slc38a2
solute carrier family 38, member 2
decreases expression
ISO
N(4)-hydroxycytidine results in decreased expression of SLC38A2 mRNA
CTD
PMID:37748715
NCBI chr 7:127,851,267...127,863,482
Ensembl chr 7:127,851,267...127,863,436
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Slc38a7
solute carrier family 38, member 7
decreases expression
ISO
N(4)-hydroxycytidine results in decreased expression of SLC38A7 mRNA
CTD
PMID:37748715
NCBI chr19:9,209,203...9,225,472
Ensembl chr19:9,209,257...9,225,454
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Slc39a4
solute carrier family 39 member 4
decreases expression
ISO
N(4)-hydroxycytidine results in decreased expression of SLC39A4 mRNA
CTD
PMID:37748715
NCBI chr 7:108,333,368...108,337,553
Ensembl chr 7:108,333,381...108,337,553
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Slc3a2
solute carrier family 3 member 2
decreases expression
ISO
N(4)-hydroxycytidine results in decreased expression of SLC3A2 mRNA
CTD
PMID:37748715
NCBI chr 1:205,604,468...205,618,931
Ensembl chr 1:205,604,468...205,618,931
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Slc44a4
solute carrier family 44, member 4
multiple interactions decreases expression
ISO
4-nitrobenzylthioinosine inhibits the reaction [N(4)-hydroxycytidine results in decreased expression of SLC44A4 mRNA]
CTD
PMID:37748715
NCBI chr20:3,903,099...3,919,215
Ensembl chr20:3,903,099...3,919,215
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Slc6a9
solute carrier family 6 member 9
decreases expression
ISO
N(4)-hydroxycytidine results in decreased expression of SLC6A9 mRNA
CTD
PMID:37748715
NCBI chr 5:131,374,562...131,408,733
Ensembl chr 5:131,374,542...131,408,728
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Slc7a1
solute carrier family 7 member 1
multiple interactions increases expression
ISO
4-nitrobenzylthioinosine inhibits the reaction [N(4)-hydroxycytidine results in increased expression of SLC7A1 mRNA]
CTD
PMID:37748715
NCBI chr12:6,628,288...6,703,849
Ensembl chr12:6,628,007...6,703,849
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Slc7a3
solute carrier family 7 member 3
increases expression
ISO
N(4)-hydroxycytidine results in increased expression of SLC7A3 mRNA
CTD
PMID:37748715
NCBI chr X:66,210,071...66,216,482
Ensembl chr X:66,210,081...66,215,708
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Slc7a5
solute carrier family 7 member 5
decreases expression
ISO
N(4)-hydroxycytidine results in decreased expression of SLC7A5 mRNA
CTD
PMID:37748715
NCBI chr19:49,935,220...49,963,823
Ensembl chr19:49,935,220...49,963,823
G
Slc7a7
solute carrier family 7 member 7
decreases expression
ISO
N(4)-hydroxycytidine results in decreased expression of SLC7A7 mRNA
CTD
PMID:37748715
NCBI chr15:27,822,088...27,873,121
Ensembl chr15:27,822,091...27,865,648
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Smcr8
SMCR8-C9orf72 complex subunit
decreases expression
ISO
N(4)-hydroxycytidine results in decreased expression of SMCR8 mRNA
CTD
PMID:37748715
NCBI chr10:45,457,962...45,465,101
Ensembl chr10:45,457,605...45,468,876
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Smim22
small integral membrane protein 22
decreases expression
ISO
N(4)-hydroxycytidine results in decreased expression of SMIM22 mRNA
CTD
PMID:37748715
NCBI chr10:10,572,146...10,574,339
G
Snord1c
small nucleolar RNA, C/D box 1C
decreases expression
ISO
N(4)-hydroxycytidine results in decreased expression of SNORD1C mRNA
CTD
PMID:37748715
NCBI chr10:101,905,797...101,905,872
Ensembl chr10:101,905,797...101,905,872
G
Snx4
sorting nexin 4
decreases expression
ISO
N(4)-hydroxycytidine results in decreased expression of SNX4 mRNA
CTD
PMID:37748715
NCBI chr11:67,460,872...67,518,143
Ensembl chr11:67,460,870...67,518,174
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Spag7
sperm associated antigen 7
decreases expression
ISO
N(4)-hydroxycytidine results in decreased expression of SPAG7 mRNA
CTD
PMID:37748715
NCBI chr10:55,377,249...55,383,404
Ensembl chr10:55,377,249...55,383,404
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Sqle
squalene epoxidase
decreases expression
ISO
N(4)-hydroxycytidine results in decreased expression of SQLE mRNA
CTD
PMID:37748715
NCBI chr 7:90,867,973...90,883,623
Ensembl chr 7:90,868,011...90,883,618
G
Srxn1
sulfiredoxin 1
decreases expression
ISO
N(4)-hydroxycytidine results in decreased expression of SRXN1 mRNA
CTD
PMID:37748715
NCBI chr 3:140,604,490...140,610,050
Ensembl chr 3:140,599,608...140,628,448
G
Stc2
stanniocalcin 2
multiple interactions increases expression
ISO
4-nitrobenzylthioinosine inhibits the reaction [N(4)-hydroxycytidine results in increased expression of STC2 mRNA]
CTD
PMID:37748715
NCBI chr10:16,251,046...16,260,815
Ensembl chr10:16,250,853...16,262,973
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Stil
STIL, centriolar assembly protein
decreases expression
ISO
N(4)-hydroxycytidine results in decreased expression of STIL mRNA
CTD
PMID:37748715
NCBI chr 5:128,520,837...128,573,732
Ensembl chr 5:128,520,953...128,573,730
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Stx7
syntaxin 7
decreases expression
ISO
N(4)-hydroxycytidine results in decreased expression of STX7 mRNA
CTD
PMID:37748715
NCBI chr 1:21,197,075...21,237,320
Ensembl chr 1:21,197,075...21,237,279
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Svil
supervillin
decreases expression
ISO
N(4)-hydroxycytidine results in decreased expression of SVIL mRNA
CTD
PMID:37748715
NCBI chr17:52,648,502...52,844,114
Ensembl chr17:52,648,502...52,793,404
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Sycp1
synaptonemal complex protein 1
decreases expression
ISO
N(4)-hydroxycytidine results in decreased expression of SYCP1 mRNA
CTD
PMID:37748715
NCBI chr 2:190,296,688...190,456,687
Ensembl chr 2:190,296,954...190,456,737
G
Tars1
threonyl-tRNA synthetase 1
decreases expression
ISO
N(4)-hydroxycytidine results in decreased expression of TARS mRNA
CTD
PMID:37748715
NCBI chr 2:60,368,893...60,387,715
Ensembl chr 2:60,367,796...60,387,717
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Tas2r108
taste receptor, type 2, member 108
decreases expression
ISO
N(4)-hydroxycytidine results in decreased expression of TAS2R108 mRNA
CTD
PMID:37748715
NCBI chr 4:69,287,667...69,288,581
Ensembl chr 4:69,287,667...69,288,581
G
Tat
tyrosine aminotransferase
decreases expression
ISO
N(4)-hydroxycytidine results in decreased expression of TAT mRNA
CTD
PMID:37748715
NCBI chr19:37,947,153...37,957,717
Ensembl chr19:37,947,112...37,958,031
G
Tbcc
tubulin folding cofactor C
decreases expression
ISO
N(4)-hydroxycytidine results in decreased expression of TBCC mRNA
CTD
PMID:37748715
NCBI chr 9:14,098,855...14,100,043
Ensembl chr 9:14,098,868...14,100,042
G
Tdg
thymine-DNA glycosylase
decreases expression
ISO
N(4)-hydroxycytidine results in decreased expression of TDG mRNA
CTD
PMID:37748715
NCBI chr 7:21,077,853...21,097,617
Ensembl chr 7:21,077,853...21,097,567
G
Tec
tec protein tyrosine kinase
decreases expression
ISO
N(4)-hydroxycytidine results in decreased expression of TEC mRNA
CTD
PMID:37748715
NCBI chr14:35,352,551...35,461,585
Ensembl chr14:35,352,829...35,461,557
G
Terf1
telomeric repeat binding factor 1
decreases expression
ISO
N(4)-hydroxycytidine results in decreased expression of TERF1 mRNA
CTD
PMID:37748715
NCBI chr 5:3,443,103...3,472,377
Ensembl chr 5:3,443,106...3,472,340
G
Thap4
THAP domain containing 4
decreases expression
ISO
N(4)-hydroxycytidine results in decreased expression of THAP4 mRNA
CTD
PMID:37748715
NCBI chr 9:94,242,581...94,282,312
Ensembl chr 9:94,242,581...94,282,306
G
Tmppe
transmembrane protein with metallophosphoesterase domain
decreases expression
ISO
N(4)-hydroxycytidine results in decreased expression of TMPPE mRNA
CTD
PMID:37748715
NCBI chr 8:114,085,497...114,093,388
Ensembl chr 8:114,084,831...114,094,286
G
Top2a
DNA topoisomerase II alpha
decreases expression
ISO
N(4)-hydroxycytidine results in decreased expression of TOP2A mRNA
CTD
PMID:37748715
NCBI chr10:83,945,731...83,976,874
Ensembl chr10:83,945,735...83,976,874
G
Tor1aip1
torsin 1A interacting protein 1
decreases expression
ISO
N(4)-hydroxycytidine results in decreased expression of TOR1AIP1 mRNA
CTD
PMID:37748715
NCBI chr13:68,196,681...68,226,121
Ensembl chr13:68,196,681...68,225,862
G
Tp53inp1
tumor protein p53 inducible nuclear protein 1
decreases expression
ISO
N(4)-hydroxycytidine results in decreased expression of TRP53INP1 mRNA
CTD
PMID:37748715
NCBI chr 5:24,253,986...24,272,250
Ensembl chr 5:24,260,568...24,267,968
G
Tpcn2
two pore segment channel 2
decreases expression
ISO
N(4)-hydroxycytidine results in decreased expression of TPCN2 mRNA
CTD
PMID:37748715
NCBI chr 1:200,416,538...200,446,252
Ensembl chr 1:200,416,540...200,446,236
G
Trib3
tribbles pseudokinase 3
increases expression multiple interactions
ISO
N(4)-hydroxycytidine results in increased expression of TRIB3 mRNA 4-nitrobenzylthioinosine inhibits the reaction [N(4)-hydroxycytidine results in increased expression of TRIB3 mRNA]
CTD
PMID:37748715
NCBI chr 3:140,809,634...140,815,230
Ensembl chr 3:140,809,043...140,814,497
G
Trim32
tripartite motif-containing 32
decreases expression
ISO
N(4)-hydroxycytidine results in decreased expression of TRIM32 mRNA
CTD
PMID:37748715
NCBI chr 5:79,005,139...79,016,615
Ensembl chr 5:78,999,389...79,022,018
G
Trip12
thyroid hormone receptor interactor 12
decreases expression
ISO
N(4)-hydroxycytidine results in decreased expression of TRIP12 mRNA
CTD
PMID:37748715
NCBI chr 9:85,916,691...86,043,312
Ensembl chr 9:85,916,691...86,051,403
G
Trpm6
transient receptor potential cation channel, subfamily M, member 6
decreases expression
ISO
N(4)-hydroxycytidine results in decreased expression of TRPM6 mRNA
CTD
PMID:37748715
NCBI chr 1:216,136,407...216,320,523
Ensembl chr 1:216,170,038...216,320,520
G
Tubb5
tubulin, beta 5 class I
decreases expression
ISO
N(4)-hydroxycytidine results in decreased expression of TUBB5 mRNA
CTD
PMID:37748715
NCBI chr20:2,912,779...2,916,928
Ensembl chr20:2,912,778...2,916,940
G
Tug1
taurine up-regulated 1
decreases expression
ISO
N(4)-hydroxycytidine results in decreased expression of TUG1 mRNA
CTD
PMID:37748715
NCBI chr14:78,519,894...78,526,927
Ensembl chr14:78,522,506...78,526,927
G
Txnip
thioredoxin interacting protein
decreases expression
ISO
N(4)-hydroxycytidine results in decreased expression of TXNIP mRNA
CTD
PMID:37748715
NCBI chr 2:184,093,079...184,096,882
Ensembl chr 2:184,092,991...184,096,886
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Ugdh
UDP-glucose 6-dehydrogenase
decreases expression
ISO
N(4)-hydroxycytidine results in decreased expression of UGDH mRNA
CTD
PMID:37748715
NCBI chr14:42,848,704...42,872,351
Ensembl chr14:42,848,854...42,872,354
G
Vangl1
VANGL planar cell polarity protein 1
decreases expression
ISO
N(4)-hydroxycytidine results in decreased expression of VANGL1 mRNA
CTD
PMID:37748715
NCBI chr 2:189,586,681...189,637,609
Ensembl chr 2:189,589,229...189,637,619
G
Vegfa
vascular endothelial growth factor A
decreases expression
ISO
N(4)-hydroxycytidine results in decreased expression of VEGFA mRNA
CTD
PMID:37748715
NCBI chr 9:14,955,300...14,970,641
Ensembl chr 9:14,955,300...14,970,641
G
Vtcn1
V-set domain containing T cell activation inhibitor 1
decreases expression
ISO
N(4)-hydroxycytidine results in decreased expression of VTCN1 mRNA
CTD
PMID:37748715
NCBI chr 2:188,253,594...188,321,658
Ensembl chr 2:188,253,594...188,321,658
G
Yars1
tyrosyl-tRNA synthetase 1
decreases expression
ISO
N(4)-hydroxycytidine results in decreased expression of YARS mRNA
CTD
PMID:37748715
NCBI chr 5:141,535,815...141,564,029
Ensembl chr 5:141,535,759...141,563,833
G
Yipf2
Yip1 domain family, member 2
decreases expression
ISO
N(4)-hydroxycytidine results in decreased expression of YIPF2 mRNA
CTD
PMID:37748715
NCBI chr 8:20,141,148...20,145,349
Ensembl chr 8:20,141,155...20,145,339
G
Ypel5
yippee-like 5
decreases expression
ISO
N(4)-hydroxycytidine results in decreased expression of YPEL5 mRNA
CTD
PMID:37748715
NCBI chr 6:22,656,284...22,671,741
Ensembl chr 6:22,656,285...22,671,691
G
Zfp516
zinc finger protein 516
decreases expression
ISO
N(4)-hydroxycytidine results in decreased expression of ZFP516 mRNA
CTD
PMID:37748715
NCBI chr18:76,286,453...76,386,526
Ensembl chr18:76,302,096...76,385,269
G
Zswim5
zinc finger, SWIM-type containing 5
decreases expression
ISO
N(4)-hydroxycytidine results in decreased expression of ZSWIM5 mRNA
CTD
PMID:37748715
NCBI chr 5:130,346,733...130,463,791
Ensembl chr 5:130,343,034...130,463,784
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