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CHEBI ONTOLOGY - ANNOTATIONS

The Chemical Entities of Biological Interest (ChEBI) ontology is downloaded weekly from EMBL-EBI at http://www.ebi.ac.uk/chebi/. The data is made available under the Creative Commons License (CC BY 3.0, http://creativecommons.org/licenses/by/3.0/). For more information see: Degtyarenko et al. (2008) ChEBI: a database and ontology for chemical entities of biological interest. Nucleic Acids Res. 36, D344–D350.
Term:guanosine 5'-monophosphate
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Accession:CHEBI:17345 term browser browse the term
Definition:A purine ribonucleoside 5'-monophosphate having guanine as the nucleobase.
Synonyms:exact_synonym: 5'-guanylic acid;   [(2R,3S,4R,5R)-5-(2-amino-6-oxo-1,6-dihydro-9H-purin-9-yl)-3,4-dihydroxytetrahydrofuran-2-yl]methyl dihydrogen phosphate
 related_synonym: 5'-GMP;   Formula=C10H14N5O8P;   GMP;   Guanosine 5'-phosphate;   Guanosine monophosphate;   Guanylic acid;   InChI=1S/C10H14N5O8P/c11-10-13-7-4(8(18)14-10)12-2-15(7)9-6(17)5(16)3(23-9)1-22-24(19,20)21/h2-3,5-6,9,16-17H,1H2,(H2,19,20,21)(H3,11,13,14,18)/t3-,5-,6-,9-/m1/s1;   InChIKey=RQFCJASXJCIDSX-UUOKFMHZSA-N;   SMILES=Nc1nc2n(cnc2c(=O)[nH]1)[C@@H]1O[C@H](COP(O)(O)=O)[C@@H](O)[C@H]1O;   pG
 alt_id: CHEBI:13341;   CHEBI:14381;   CHEBI:24449;   CHEBI:24450;   CHEBI:40119;   CHEBI:42647;   CHEBI:42831;   CHEBI:42887;   CHEBI:42979;   CHEBI:47450;   CHEBI:5228
 xref: CAS:85-32-5;   DrugBank:DB01972;   HMDB:HMDB0001397;   KEGG:C00144;   KNApSAcK:C00019635
 xref_mesh: MESH:D006157
 xref: MetaCyc:GMP;   PDBeChem:5GP;   PMID:11233304;   PMID:11670950;   PMID:22735334;   PMID:2559771;   PMID:3569407;   Reaxys:59430;   Wikipedia:Guanosine_monophosphate
 cyclic_relationship: is_conjugate_acid_of CHEBI:58115


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guanosine 5'-monophosphate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fut8 fucosyltransferase 8 decreases activity ISO Guanosine Monophosphate results in decreased activity of FUT8 protein CTD PMID:12770769 NCBI chr 6:95,949,246...96,176,677
Ensembl chr 6:95,949,991...96,176,677 		JBrowse link
G Gmds GDP-mannose 4, 6-dehydratase affects binding ISO Guanosine Monophosphate binds to GMDS protein CTD PMID:25526675 NCBI chr17:32,095,315...32,621,975
Ensembl chr17:32,095,386...32,621,961 		JBrowse link
poly(guanylic acid) term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acta2 actin alpha 2, smooth muscle multiple interactions EXP Poly G inhibits the reaction [Particulate Matter results in increased expression of ACTA2 mRNA]; Poly G inhibits the reaction [Particulate Matter results in increased expression of ACTA2 protein]; Poly G inhibits the reaction [Silicon Dioxide results in increased expression of ACTA2 mRNA]; Poly G inhibits the reaction [Silicon Dioxide results in increased expression of ACTA2 protein] CTD PMID:30391304 PMID:31028789 NCBI chr 1:231,746,527...231,759,307
Ensembl chr 1:231,746,548...231,759,554 		JBrowse link
G Atf6 activating transcription factor 6 multiple interactions EXP Poly G inhibits the reaction [Silicon Dioxide results in increased expression of ATF6 protein] CTD PMID:31028789 NCBI chr13:82,927,579...83,106,381
Ensembl chr13:82,930,034...83,107,177 		JBrowse link
G Bnip3 BCL2 interacting protein 3 multiple interactions EXP [Poly G co-treated with Silicon Dioxide] results in decreased expression of BNIP3 mRNA CTD PMID:38523403 NCBI chr 1:193,708,164...193,725,348
Ensembl chr 1:193,708,167...193,725,359 		JBrowse link
G Bnip3l BCL2 interacting protein 3 like multiple interactions EXP Poly G inhibits the reaction [Silicon Dioxide results in decreased expression of BNIP3L mRNA] CTD PMID:38523403 NCBI chr15:41,174,594...41,197,730
Ensembl chr15:41,174,594...41,197,803 		JBrowse link
G Casp12 caspase 12 multiple interactions EXP Poly G inhibits the reaction [Silicon Dioxide results in increased expression of CASP12 protein] CTD PMID:31028789 NCBI chr 8:2,642,296...2,669,549
Ensembl chr 8:2,642,434...2,674,037 		JBrowse link
G Cdh1 cadherin 1 multiple interactions EXP Poly G inhibits the reaction [Particulate Matter results in decreased expression of CDH1 mRNA]; Poly G inhibits the reaction [Particulate Matter results in decreased expression of CDH1 protein]; Poly G inhibits the reaction [Silicon Dioxide results in decreased expression of CDH1 mRNA]; Poly G inhibits the reaction [Silicon Dioxide results in decreased expression of CDH1 protein] CTD PMID:30391304 PMID:31028789 PMID:38523403 NCBI chr19:34,492,371...34,561,775
Ensembl chr19:34,492,371...34,561,775 		JBrowse link
G Col1a1 collagen type I alpha 1 chain multiple interactions EXP Poly G inhibits the reaction [Particulate Matter results in increased expression of COL1A1 mRNA]; Poly G inhibits the reaction [Silicon Dioxide results in increased expression of COL1A1 mRNA]; Poly G inhibits the reaction [Silicon Dioxide results in increased expression of COL1A1 protein] CTD PMID:30391304 PMID:31028789 PMID:38523403 NCBI chr10:79,883,622...79,900,625
Ensembl chr10:79,883,622...79,900,624 		JBrowse link
G Col3a1 collagen type III alpha 1 chain multiple interactions EXP Poly G inhibits the reaction [Particulate Matter results in increased expression of COL3A1 mRNA]; Poly G inhibits the reaction [Silicon Dioxide results in increased expression of COL3A1 mRNA]; Poly G inhibits the reaction [Silicon Dioxide results in increased expression of COL3A1 protein] CTD PMID:30391304 PMID:31028789 PMID:38523403 NCBI chr 9:47,374,611...47,410,547
Ensembl chr 9:47,374,593...47,410,547 		JBrowse link
G Ddit3 DNA-damage inducible transcript 3 multiple interactions EXP Poly G inhibits the reaction [Silicon Dioxide results in increased expression of DDIT3 protein] CTD PMID:31028789 NCBI chr 7:63,115,645...63,121,203
Ensembl chr 7:63,116,380...63,121,201 		JBrowse link
G Dnm1l dynamin 1-like multiple interactions EXP [Poly G co-treated with Silicon Dioxide] results in increased expression of DNM1L protein CTD PMID:38523403 NCBI chr11:84,581,216...84,632,382
Ensembl chr11:84,581,216...84,631,482 		JBrowse link
G Ern1 endoplasmic reticulum to nucleus signaling 1 multiple interactions EXP Poly G inhibits the reaction [Silicon Dioxide results in increased expression of ERN1 protein] CTD PMID:31028789 NCBI chr10:91,326,889...91,421,201
Ensembl chr10:91,330,654...91,421,029 		JBrowse link
G Hspa5 heat shock protein family A (Hsp70) member 5 multiple interactions EXP Poly G inhibits the reaction [Silicon Dioxide results in increased expression of HSPA5 protein] CTD PMID:31028789 NCBI chr 3:18,055,507...18,059,969
Ensembl chr 3:18,055,405...18,059,891 		JBrowse link
G Marco macrophage receptor with collagenous structure multiple interactions ISO
EXP		 Poly G inhibits the reaction [MARCO protein binds to and results in increased uptake of Polystyrenes]
Poly G inhibits the reaction [Particulate Matter results in increased expression of MARCO protein]; Poly G inhibits the reaction [Silicon Dioxide results in increased expression of MARCO protein]		 CTD PMID:17361018 PMID:30391304 PMID:31028789 PMID:38523403 NCBI chr13:31,616,278...31,648,521
Ensembl chr13:31,616,278...31,648,521 		JBrowse link
G Mfn2 mitofusin 2 multiple interactions EXP Poly G inhibits the reaction [Silicon Dioxide results in decreased expression of MFN2 protein] CTD PMID:38523403 NCBI chr 5:158,304,285...158,335,502
Ensembl chr 5:158,304,287...158,335,342 		JBrowse link
G Mt-co1 mitochondrially encoded cytochrome c oxidase I multiple interactions EXP Poly G inhibits the reaction [Silicon Dioxide results in decreased expression of COX1 protein] CTD PMID:38523403 NCBI chr MT:5,323...6,867
NCBI chr MT:5,323...6,867
NCBI chr MT:5,323...6,867
NCBI chr MT:5,323...6,867
NCBI chr MT:5,323...6,867
NCBI chr MT:5,323...6,867
NCBI chr MT:5,323...6,867
Ensembl chr MT:5,323...6,867 		JBrowse link
G Mt-nd1 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 1 multiple interactions EXP Poly G inhibits the reaction [Silicon Dioxide results in decreased expression of ND1 protein] CTD PMID:38523403 NCBI chr MT:2,740...3,694
NCBI chr MT:2,740...3,694
NCBI chr MT:2,740...3,694
NCBI chr MT:2,740...3,694
NCBI chr MT:2,740...3,694
NCBI chr MT:2,740...3,694
NCBI chr MT:2,740...3,694
NCBI chr MT:2,740...3,694
NCBI chr MT:2,740...3,694
Ensembl chr MT:2,740...3,694 		JBrowse link
G Ppargc1a PPARG coactivator 1 alpha multiple interactions EXP Poly G inhibits the reaction [Silicon Dioxide results in decreased expression of PPARGC1A mRNA]; Poly G inhibits the reaction [Silicon Dioxide results in decreased expression of PPARGC1A protein] CTD PMID:38523403 NCBI chr14:58,860,752...59,516,525
Ensembl chr14:58,861,144...59,512,656 		JBrowse link
G Prkn parkin RBR E3 ubiquitin protein ligase multiple interactions EXP [Poly G co-treated with Silicon Dioxide] results in decreased expression of PRKN mRNA CTD PMID:38523403 NCBI chr 1:48,688,651...49,882,520
Ensembl chr 1:48,690,556...49,882,555 		JBrowse link
G Sdha succinate dehydrogenase complex flavoprotein subunit A multiple interactions EXP Poly G inhibits the reaction [Silicon Dioxide results in decreased expression of SDHA protein] CTD PMID:38523403 NCBI chr 1:28,935,965...28,960,936
Ensembl chr 1:28,940,164...28,961,535 		JBrowse link
G Tfam transcription factor A, mitochondrial multiple interactions EXP [Poly G co-treated with Silicon Dioxide] results in increased expression of TFAM protein CTD PMID:38523403 NCBI chr20:17,356,243...17,368,293
Ensembl chr20:17,356,197...17,368,292 		JBrowse link
G Vim vimentin multiple interactions EXP Poly G inhibits the reaction [Particulate Matter results in increased expression of VIM mRNA]; Poly G inhibits the reaction [Particulate Matter results in increased expression of VIM protein]; Poly G inhibits the reaction [Silicon Dioxide results in increased expression of VIM mRNA]; Poly G inhibits the reaction [Silicon Dioxide results in increased expression of VIM protein] CTD PMID:30391304 PMID:31028789 NCBI chr17:76,668,701...76,677,186
Ensembl chr17:76,668,647...76,677,187 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  CHEBI ontology 19922
    role 19894
      biological role 19864
        biochemical role 19596
          metabolite 19558
            guanosine 5'-monophosphate 23
              (R)-lipoyl-GMP 0
              2'-O-methylguanosine 5'-monophosphate + 0
              4-demethylwyosine 5'-monophosphate + 0
              7-methylguanosine 5'-phosphate(1+) 0
              8-oxo-GMP 0
              GMP 3'-end residue + 21
              GMP 5'-end residue + 21
              N(1)-methylguanosine 5'-monophosphate + 0
              N(2),N(2),N(7)-trimethylguanosine 5'-phosphate 0
              N(2),N(2)-dimethylguanosine 5'-monophosphate + 0
              N(2)-methylguanosine 5'-monophosphate + 0
              N(6)-(5'-guanylyl)-L-lysine 0
              N(7)-methylguanosine 5'-phosphate + 0
              N(epsilon)-(5'-guanylyl)-N(alpha)-acetyl-L-lysine methyl ester(1-) 0
              N(epsilon)-GMP-N(alpha)-acetyl-L-lysine methyl ester 0
              beta-hydroxywybutosine 5'-monophosphate + 0
              coenzyme F390-G 0
              ddhGMP 0
              guanosine 5'-monophosphate residue + 21
              wybutosine 5'-monophosphate + 0
Path 2
Term Annotations click to browse term
  CHEBI ontology 19922
    subatomic particle 19892
      composite particle 19892
        hadron 19920
          baryon 19892
            nucleon 19920
              atomic nucleus 19892
                atom 19892
                  main group element atom 19866
                    p-block element atom 19866
                      chalcogen 19587
                        oxygen atom 19587
                          oxygen molecular entity 19587
                            hydroxides 19390
                              oxoacid 18821
                                pnictogen oxoacid 14983
                                  phosphorus oxoacid 14581
                                    phosphoric acids 13915
                                      phosphoric acid 13923
                                        phosphoric acid derivative 13828
                                          phosphate 13820
                                            organic phosphate 13820
                                              carbohydrate phosphate 1871
                                                phospho sugar 1714
                                                  aldose phosphate 1713
                                                    aldopentose phosphate 1705
                                                      ribose phosphate 1700
                                                        ribonucleotide 1662
                                                          purine ribonucleotide 1620
                                                            guanyl ribonucleotide 148
                                                              guanosine phosphate 81
                                                                guanosine 5'-phosphate 81
                                                                  guanosine 5'-monophosphate 23
                                                                    (R)-lipoyl-GMP 0
                                                                    2'-O-methylguanosine 5'-monophosphate + 0
                                                                    4-demethylwyosine 5'-monophosphate + 0
                                                                    7-methylguanosine 5'-phosphate(1+) 0
                                                                    8-oxo-GMP 0
                                                                    GMP 3'-end residue + 21
                                                                    GMP 5'-end residue + 21
                                                                    N(1)-methylguanosine 5'-monophosphate + 0
                                                                    N(2),N(2),N(7)-trimethylguanosine 5'-phosphate 0
                                                                    N(2),N(2)-dimethylguanosine 5'-monophosphate + 0
                                                                    N(2)-methylguanosine 5'-monophosphate + 0
                                                                    N(6)-(5'-guanylyl)-L-lysine 0
                                                                    N(7)-methylguanosine 5'-phosphate + 0
                                                                    N(epsilon)-(5'-guanylyl)-N(alpha)-acetyl-L-lysine methyl ester(1-) 0
                                                                    N(epsilon)-GMP-N(alpha)-acetyl-L-lysine methyl ester 0
                                                                    beta-hydroxywybutosine 5'-monophosphate + 0
                                                                    coenzyme F390-G 0
                                                                    ddhGMP 0
                                                                    guanosine 5'-monophosphate residue + 21
                                                                    wybutosine 5'-monophosphate + 0
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