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CHEBI ONTOLOGY - ANNOTATIONS

The Chemical Entities of Biological Interest (ChEBI) ontology is downloaded weekly from EMBL-EBI at http://www.ebi.ac.uk/chebi/. The data is made available under the Creative Commons License (CC BY 3.0, http://creativecommons.org/licenses/by/3.0/). For more information see: Degtyarenko et al. (2008) ChEBI: a database and ontology for chemical entities of biological interest. Nucleic Acids Res. 36, D344–D350.
Term:uridine 5'-monophosphate
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Accession:CHEBI:16695 term browser browse the term
Definition:A pyrimidine ribonucleoside 5'-monophosphate having uracil as the nucleobase.
Synonyms:related_synonym: 5'-UMP;   5'Uridylic acid;   Formula=C9H13N2O9P;   InChI=1S/C9H13N2O9P/c12-5-1-2-11(9(15)10-5)8-7(14)6(13)4(20-8)3-19-21(16,17)18/h1-2,4,6-8,13-14H,3H2,(H,10,12,15)(H2,16,17,18)/t4-,6-,7-,8-/m1/s1;   InChIKey=DJJCXFVJDGTHFX-XVFCMESISA-N;   SMILES=O[C@@H]1[C@@H](COP(O)(O)=O)O[C@H]([C@@H]1O)n1ccc(=O)[nH]c1=O;   UMP;   Uridine monophosphate;   Uridylic acid;   pU;   uridine 5'-(dihydrogen phosphate);   uridine 5'-phosphate;   uridine 5'-phosphoric acid;   uridylate
 alt_id: CHEBI:13508;   CHEBI:13509;   CHEBI:27231;   CHEBI:46362;   CHEBI:46381;   CHEBI:46382;   CHEBI:47721;   CHEBI:9849
 xref: Beilstein:47486;   CAS:58-97-9;   DrugBank:DB03685;   Gmelin:310455;   HMDB:HMDB0000288;   KEGG:C00105;   KNApSAcK:C00007311
 xref_mesh: MESH:D014542
 xref: MetaCyc:UMP;   PDBeChem:U5PrF10;   PDBeChem:UrF10;   PMID:22735334;   PMID:2559771;   Reaxys:47486;   Wikipedia:Uridine_monophosphate
 cyclic_relationship: is_conjugate_acid_of CHEBI:57865


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uridine 5'-monophosphate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bsg basigin decreases expression ISO Uridine Monophosphate results in decreased expression of BSG protein CTD PMID:36574092 NCBI chr 7:9,993,170...10,000,387
Ensembl chr 7:9,993,170...10,000,387 		JBrowse link
sofosbuvir term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Klrc1 killer cell lectin like receptor C1 decreases expression ISO sofosbuvir co-treated with ledipasvir decreased expression of NCR1 protein in natural killer cells RGD PMID:31218578 RGD:40400920 NCBI chr 4:163,142,142...163,152,425
Ensembl chr 4:163,147,189...163,152,425 		JBrowse link
G Ncr1 natural cytotoxicity triggering receptor 1 affects expression ISO sofosbuvir co-treated with ledipasvir affects expression of NCR1 protein in natural killer cells RGD PMID:31218578 RGD:40400920 NCBI chr 1:69,614,744...69,622,594
Ensembl chr 1:69,616,601...69,660,558 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  CHEBI ontology 19922
    role 19894
      biological role 19864
        biochemical role 19596
          metabolite 19558
            prokaryotic metabolite 18602
              bacterial metabolite 18602
                Escherichia coli metabolite 18538
                  uridine 5'-monophosphate 3
                    2'-O-methyluridine 5'-monophosphate + 0
                    5,6-dihydrouridine 5'-monophosphate + 0
                    5-(2-methoxy-2-oxoethyl)uridine 5'-monophosphate + 0
                    5-aminomethyl-2-thiouridine 5'-monophosphate + 0
                    5-bromouridine 5'-monophosphate 0
                    5-carboxymethylaminomethyl-2'-O-methyluridine 5'-monophosphate + 0
                    5-carboxymethylaminomethyluridine 5'-monophosphate + 0
                    5-fluorouridine 5'-monophosphate 0
                    5-methylaminomethyl-2-thiouridine 5'-monophosphate + 0
                    6-oxouridine 5'-phosphate 0
                    N(3)-methyluridine 5'-monophosphate + 0
                    O(4')-(5'-uridylyl)-L-tyrosine 0
                    UMP 3'-end residue + 0
                    UMP 5'-end residue + 0
                    ddhUMP 0
                    sofosbuvir + 2
                    uracil octosyl acid 5'-phosphate 0
                    uridine 5'-monophosphate residue + 0
Path 2
Term Annotations click to browse term
  CHEBI ontology 19922
    subatomic particle 19892
      composite particle 19892
        hadron 19920
          baryon 19892
            nucleon 19920
              atomic nucleus 19892
                atom 19892
                  main group element atom 19866
                    p-block element atom 19866
                      chalcogen 19587
                        oxygen atom 19587
                          oxygen molecular entity 19587
                            hydroxides 19390
                              oxoacid 18821
                                pnictogen oxoacid 14983
                                  phosphorus oxoacid 14581
                                    phosphoric acids 13915
                                      phosphoric acid 13923
                                        phosphoric acid derivative 13828
                                          phosphate 13820
                                            organic phosphate 13820
                                              carbohydrate phosphate 1871
                                                phospho sugar 1714
                                                  aldose phosphate 1713
                                                    aldopentose phosphate 1705
                                                      ribose phosphate 1700
                                                        ribonucleotide 1662
                                                          ribonucleoside 5'-phosphate 652
                                                            ribonucleoside 5'-monophosphate 366
                                                              pyrimidine ribonucleoside 5'-monophosphate 330
                                                                uridine 5'-monophosphate 3
                                                                  2'-O-methyluridine 5'-monophosphate + 0
                                                                  5,6-dihydrouridine 5'-monophosphate + 0
                                                                  5-(2-methoxy-2-oxoethyl)uridine 5'-monophosphate + 0
                                                                  5-aminomethyl-2-thiouridine 5'-monophosphate + 0
                                                                  5-bromouridine 5'-monophosphate 0
                                                                  5-carboxymethylaminomethyl-2'-O-methyluridine 5'-monophosphate + 0
                                                                  5-carboxymethylaminomethyluridine 5'-monophosphate + 0
                                                                  5-fluorouridine 5'-monophosphate 0
                                                                  5-methylaminomethyl-2-thiouridine 5'-monophosphate + 0
                                                                  6-oxouridine 5'-phosphate 0
                                                                  N(3)-methyluridine 5'-monophosphate + 0
                                                                  O(4')-(5'-uridylyl)-L-tyrosine 0
                                                                  UMP 3'-end residue + 0
                                                                  UMP 5'-end residue + 0
                                                                  ddhUMP 0
                                                                  sofosbuvir + 2
                                                                  uracil octosyl acid 5'-phosphate 0
                                                                  uridine 5'-monophosphate residue + 0
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