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CHEBI ONTOLOGY - ANNOTATIONS

The Chemical Entities of Biological Interest (ChEBI) ontology is downloaded weekly from EMBL-EBI at http://www.ebi.ac.uk/chebi/. The data is made available under the Creative Commons License (CC BY 3.0, http://creativecommons.org/licenses/by/3.0/). For more information see: Degtyarenko et al. (2008) ChEBI: a database and ontology for chemical entities of biological interest. Nucleic Acids Res. 36, D344–D350.
Term:2'-deoxyguanosine 5'-monophosphate
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Accession:CHEBI:16192 term browser browse the term
Definition:A purine 2'-deoxyribonucleoside 5'-monophosphate having guanine as the nucleobase.
Synonyms:exact_synonym: 2'-deoxy-5'-guanylic acid
 related_synonym: 2'-Deoxy-GMP;   2'-Deoxyguanosine 5'-(dihydrogen phosphate);   2'-Deoxyguanosine 5'-phosphate;   2'-Deoxyguanylic acid;   2'-dGMP;   Deoxy-GMP;   Deoxyguanosine 5'-monophosphate;   Deoxyguanosine 5'-phosphate;   Deoxyguanosine monophosphate;   Deoxyguanylic acid;   Formula=C10H14N5O7P;   InChI=1S/C10H14N5O7P/c11-10-13-8-7(9(17)14-10)12-3-15(8)6-1-4(16)5(22-6)2-21-23(18,19)20/h3-6,16H,1-2H2,(H2,18,19,20)(H3,11,13,14,17)/t4-,5+,6+/m0/s1;   InChIKey=LTFMZDNNPPEQNG-KVQBGUIXSA-N;   SMILES=Nc1nc2n(cnc2c(=O)[nH]1)[C@H]1C[C@H](O)[C@@H](COP(O)(O)=O)O1;   dGMP
 alt_id: CHEBI:10496;   CHEBI:14074;   CHEBI:19246;   CHEBI:41902;   CHEBI:41939;   CHEBI:42676;   CHEBI:42726;   CHEBI:42733;   CHEBI:47449
 xref: CAS:902-04-5;   DrugBank:DB04457;   ECMDB:ECMDB01044;   HMDB:HMDB0001044;   KEGG:C00362;   KNApSAcK:C00019356
 xref_mesh: MESH:C007257
 xref: MetaCyc:DGMP;   PDBeChem:DGP;   PMID:13610867;   PMID:20085298;   PMID:21720611;   PMID:23365666;   PMID:2559771;   PMID:9858930;   Reaxys:58430;   Wikipedia:Deoxyguanosine_monophosphate;   YMDB:YMDB00506
 cyclic_relationship: is_conjugate_acid_of CHEBI:57673;   is_enantiomer_of CHEBI:41945;   is_tautomer_of CHEBI:45049


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2'-deoxyguanosine 5'-monophosphate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Idh2 isocitrate dehydrogenase (NADP(+)) 2 multiple interactions
increases abundance		 ISO Triazines inhibits the reaction [IDH2 protein mutant form results in increased abundance of 2'-deoxyguanosine 5'-phosphate] CTD PMID:27469509 NCBI chr 1:134,038,644...134,057,969
Ensembl chr 1:134,029,772...134,058,025 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  CHEBI ontology 19917
    role 19887
      biological role 19885
        biochemical role 19569
          metabolite 19577
            prokaryotic metabolite 18622
              bacterial metabolite 18622
                Escherichia coli metabolite 18508
                  2'-deoxyguanosine 5'-monophosphate 1
                    2'-deoxyguanosine 5'-monophosphate residue + 0
                    8,5'-cyclo-2'-deoxyguanosine monophosphate 0
                    cis-diammine[bis(dGMP)]platinum 0
                    dGMP 3'-end residue + 0
                    dGMP 5'-end residue + 0
Path 2
Term Annotations click to browse term
  CHEBI ontology 19917
    subatomic particle 19915
      composite particle 19915
        hadron 19915
          baryon 19915
            nucleon 19915
              atomic nucleus 19915
                atom 19915
                  main group element atom 19855
                    p-block element atom 19855
                      chalcogen 19583
                        oxygen atom 19576
                          oxygen molecular entity 19576
                            hydroxides 19380
                              oxoacid 18792
                                pnictogen oxoacid 14981
                                  phosphorus oxoacid 14583
                                    phosphoric acids 13930
                                      phosphoric acid 13930
                                        phosphoric acid derivative 13839
                                          phosphate 13838
                                            organic phosphate 13838
                                              carbohydrate phosphate 1964
                                                phospho sugar 1809
                                                  aldose phosphate 1806
                                                    aldopentose phosphate 1798
                                                      deoxyaldopentose phosphate 9
                                                        2-deoxyribose phosphate 9
                                                          2'-deoxyribonucleotide 8
                                                            2'-deoxyribonucleoside 5'-phosphate 8
                                                              2'-deoxyribonucleoside 5'-monophosphate 3
                                                                purine 2'-deoxyribonucleoside 5'-monophosphate 1
                                                                  2'-deoxyguanosine 5'-monophosphate 1
                                                                    2'-deoxyguanosine 5'-monophosphate residue + 0
                                                                    8,5'-cyclo-2'-deoxyguanosine monophosphate 0
                                                                    cis-diammine[bis(dGMP)]platinum 0
                                                                    dGMP 3'-end residue + 0
                                                                    dGMP 5'-end residue + 0
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