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CHEBI ONTOLOGY - ANNOTATIONS

The Chemical Entities of Biological Interest (ChEBI) ontology is downloaded weekly from EMBL-EBI at http://www.ebi.ac.uk/chebi/. The data is made available under the Creative Commons License (CC BY 3.0, http://creativecommons.org/licenses/by/3.0/). For more information see: Degtyarenko et al. (2008) ChEBI: a database and ontology for chemical entities of biological interest. Nucleic Acids Res. 36, D344–D350.
Term:prenyl diphosphate
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Accession:CHEBI:16057 term browser browse the term
Definition:A prenol phosphate that is a phosphoantigen comprising the O-pyrophosphate of prenol.
Synonyms:related_synonym: 2-Isopentenyl diphosphate;   3,3-dimethylallyl pyrophosphate;   3-methylbut-2-en-1-yl trihydrogen diphosphate;   3-methylbut-2-enyl phosphono hydrogen phosphate;   DIMETHYLALLYL DIPHOSPHATE;   DMAPP;   Dimethylallyl pyrophosphate;   Monoprenyl diphosphate;   Prenol pyrophosphate;   delta-Prenyl diphosphate;   delta2-Isopentenyl diphosphate
 alt_id: CHEBI:12280;   CHEBI:14169;   CHEBI:14883;   CHEBI:18108;   CHEBI:23803;   CHEBI:26245;   CHEBI:341937;   CHEBI:42074;   CHEBI:4616;   CHEBI:8394
 xref: Beilstein:1713791;   CAS:358-72-5;   DrugBank:DB01785;   KNApSAcK:C00007294
 xref_mesh: MESH:C043060
 xref: Reaxys:1713791;   kegg.compound:C00235;   kegg.compound:C17627;   lipidmaps:LMPR01010001;   pdb-ccd:DMA;   pubmed:10608778;   pubmed:11355861;   pubmed:22300296;   pubmed:23262281;   pubmed:27356974
 chemrof_formula: C5H12O7P2
 chemrof_inchikey: CBIDRCWHNCKSTO-UHFFFAOYSA-N
 chemrof_smiles: CC(C)=CCOP(=O)(O)OP(=O)(O)O
 chemrof_inchi: InChI=1S/C5H12O7P2/c1-5(2)3-4-11-14(9,10)12-13(6,7)8/h3H,4H2,1-2H3,(H,9,10)(H2,6,7,8)
 cyclic_relationship: is_conjugate_acid_of CHEBI:57623


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prenyl diphosphate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Il12rb1 interleukin 12 receptor subunit beta 1 increases expression ISO 3,3-dimethylallyl pyrophosphate results in increased expression of IL12RB1 protein CTD PMID:12932289 NCBI chr16:18,654,207...18,668,887
Ensembl chr16:18,654,207...18,666,824 		JBrowse link
G Mvk mevalonate kinase decreases activity
multiple interactions 		ISO 3,3-dimethylallyl pyrophosphate results in decreased activity of MVK protein
3,3-dimethylallyl pyrophosphate inhibits the reaction [MVK protein results in increased hydrolysis of Adenosine Triphosphate]; 3,3-dimethylallyl pyrophosphate inhibits the reaction [MVK protein results in increased phosphorylation of Mevalonic Acid] 		CTD PMID:9392419 NCBI chr12:47,802,002...47,819,503
Ensembl chr12:47,802,002...47,819,503 		JBrowse link
G Tnfrsf1b TNF receptor superfamily member 1B increases expression ISO 3,3-dimethylallyl pyrophosphate results in increased expression of TNFRSF1B protein CTD PMID:12932289 NCBI chr 5:162,356,250...162,387,411
Ensembl chr 5:162,353,848...162,387,411 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  CHEBI ontology 20874
    role 20844
      biological role 20831
        epitope 6462
          prenyl diphosphate 3
Path 2
Term Annotations click to browse term
  CHEBI ontology 20874
    subatomic particle 20883
      composite particle 20883
        hadron 20872
          baryon 20883
            nucleon 20872
              atomic nucleus 20883
                atom 20872
                  main group element atom 20796
                    p-block element atom 20796
                      pnictogen 19695
                        phosphorus atom 14760
                          phosphorus molecular entity 14760
                            phosphorus oxoacids and derivatives 14745
                              phosphorus oxoacid derivative 14118
                                phosphoric acid derivative 13866
                                  phosphate 13865
                                    organic phosphate 13865
                                      phospholipid 326
                                        isoprenoid phosphate 75
                                          prenol phosphate 75
                                            prenyl diphosphate 3
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