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CHEBI ONTOLOGY - ANNOTATIONS

The Chemical Entities of Biological Interest (ChEBI) ontology is downloaded weekly from EMBL-EBI at http://www.ebi.ac.uk/chebi/. The data is made available under the Creative Commons License (CC BY 3.0, http://creativecommons.org/licenses/by/3.0/). For more information see: Degtyarenko et al. (2008) ChEBI: a database and ontology for chemical entities of biological interest. Nucleic Acids Res. 36, D344–D350.
Term:all-trans-retinoic acid
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Accession:CHEBI:15367 term browser browse the term
Definition:A retinoic acid in which all four exocyclic double bonds have E- (trans-) geometry.
Synonyms:exact_synonym: (2E,4E,6E,8E)-3,7-dimethyl-9-(2,6,6-trimethylcyclohex-1-en-1-yl)nona-2,4,6,8-tetraenoic acid
 related_synonym: (2E,4E,6E,8E)-3,7-dimethyl-9-(2,6,6-trimethyl-1-cyclohexenyl)nona-2,4,6,8-tetraenoic acid;   (all-E)-3,7-Dimethyl-9-(2,6,6-trimethyl-1-cyclohexen-1-yl)-2,4,6,8-nonatetraenoic acid;   3,7-dimethyl-9-(2,6,6-trimethyl-1-cyclohexene-1-yl)-2,4,6,8-nonatetraenoic acid;   3,7-dimethyl-9-(2,6,6-trimethylcyclohex-1-enyl)nona-2,4,6,8-all-trans-tetraenoic acid;   3,7-dimethyl-9-(2,6,6-trimethylcyclohexen-1-yl)nona-2E,4E,6E,8E-tetraenoic acid;   AGN 100335;   Acide retinoique (French);   Altreno;   Atralin;   Avita;   Betarretin;   Biacna;   Cordes vas;   Dermairol;   Formula=C20H28O2;   InChI=1S/C20H28O2/c1-15(8-6-9-16(2)14-19(21)22)11-12-18-17(3)10-7-13-20(18,4)5/h6,8-9,11-12,14H,7,10,13H2,1-5H3,(H,21,22)/b9-6+,12-11+,15-8+,16-14+;   InChIKey=SHGAZHPCJJPHSC-YCNIQYBTSA-N;   RETINOIC ACID;   Refissa;   Renova;   Retin-A;   Retisol-A;   Ro 1-5488;   SMILES=CC(\\C=C\\C1=C(C)CCCC1(C)C)=C/C=C/C(C)=C/C(O)=O;   Stieva-A;   Tretin M;   Tri-luma;   Veltin;   Vesanoid;   Vitamin A acid;   all-(E)-Retinoic acid;   all-trans-Tretinoin;   all-trans-Vitamin A acid;   all-trans-Vitamin A1 acid;   all-trans-beta-Retinoic acid;   beta-Retinoic acid;   trans-Retinoic acid;   tretinoin;   tretinoina;   tretinoine;   tretinoinum
 alt_id: CHEBI:45376;   CHEBI:8815
 xref: Beilstein:2057223;   CAS:302-79-4;   DrugBank:DB00755;   Drug_Central:2722;   FooDB:FDB022710;   HMDB:HMDB0001852;   KEGG:C00777;   KEGG:D00094;   LIPID_MAPS_instance:LMPR01090019
 xref_mesh: MESH:D014212
 xref: PDBeChem:REA;   PMID:10022884;   PMID:10970886;   PMID:11073974;   PMID:11214352;   PMID:11332619;   PMID:11343416;   PMID:11437362;   PMID:11556813;   PMID:11722649;   PMID:11896294;   PMID:11904404;   PMID:12958591;   PMID:14581379;   PMID:14605492;   PMID:14627725;   PMID:14704332;   PMID:14705145;   PMID:14978018;   PMID:15194426;   PMID:15318809;   PMID:15327395;   PMID:15359008;   PMID:15376324;   PMID:15476854;   PMID:15537748;   PMID:15539337;   PMID:15675886;   PMID:15839997;   PMID:16569247;   PMID:16685080;   PMID:16688769;   PMID:16720557;   PMID:16819260;   PMID:16847436;   PMID:16920920;   PMID:17073551;   PMID:17166212;   PMID:17204142;   PMID:17447762;   PMID:18052213;   PMID:18085670;   PMID:18162363;   PMID:18183617;   PMID:18318655;   PMID:18322276;   PMID:18400206;   PMID:18404486;   PMID:18440196;   PMID:18678272;   PMID:18800767;   PMID:18819820;   PMID:18977311;   PMID:19018099;   PMID:19112091;   PMID:19144697;   PMID:19427305;   PMID:19587328;   PMID:19597529;   PMID:19814868;   PMID:19841174;   PMID:21898109;   PMID:21924320;   PMID:21993673;   PMID:22134377;   PMID:22177959;   PMID:22180426;   PMID:22244299;   PMID:22261335;   PMID:22428994;   PMID:22514600;   PMID:22532966;   PMID:22534100;   PMID:22538278;   PMID:22741806;   PMID:27759097;   PMID:29492455;   PMID:33662750;   PMID:33820492;   PMID:34050114;   PMID:34050360;   PMID:34091189;   PMID:7501014;   PMID:7704533;   PMID:7961949;   Reaxys:2057223;   Wikipedia:Retinoic_acid;   Wikipedia:Tretinoin
 cyclic_relationship: is_conjugate_acid_of CHEBI:35291


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    Path 1
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      CHEBI ontology 19911
        role 19854
          chemical role 19507
            antioxidant 16171
              all-trans-retinoic acid 9915
                1-O-all-trans-retinoyl-beta-glucuronic acid 0
                4-hydroxyphenyl retinamide 3994
                5,6-epoxyretinoic acid + 0
                SR11302 0
                all-trans-13,14-dihydroretinoic acid + 0
                all-trans-16-hydroxyretinoic acid 0
                all-trans-18-hydroxyretinoic acid 0
                all-trans-3,4-didehydroretinoic acid 0
                all-trans-4,16-dihydroxyretinoic acid 0
                all-trans-4,18-dihydroxyretinoic acid 0
                all-trans-4-hydroxyretinoic acid + 9
                all-trans-4-oxo-16-hydroxyretinoic acid 0
                all-trans-4-oxo-18-hydroxyretinoic acid 0
                all-trans-4-oxoretinoic acid + 108
    Path 2
    Term Annotations click to browse term
      CHEBI ontology 19911
        subatomic particle 19909
          composite particle 19909
            hadron 19880
              baryon 19880
                nucleon 19909
                  atomic nucleus 19880
                    atom 19909
                      main group element atom 19849
                        main group molecular entity 19849
                          s-block molecular entity 19681
                            hydrogen molecular entity 19662
                              hydrides 19167
                                organic hydride 18711
                                  organic fundamental parent 18711
                                    hydrocarbon 18454
                                      terpene 14053
                                        terpenoid 13751
                                          diterpenoid 13043
                                            retinoid 10285
                                              vitamin A 9952
                                                all-trans-retinoic acid 9915
                                                  1-O-all-trans-retinoyl-beta-glucuronic acid 0
                                                  4-hydroxyphenyl retinamide 3994
                                                  5,6-epoxyretinoic acid + 0
                                                  SR11302 0
                                                  all-trans-13,14-dihydroretinoic acid + 0
                                                  all-trans-16-hydroxyretinoic acid 0
                                                  all-trans-18-hydroxyretinoic acid 0
                                                  all-trans-3,4-didehydroretinoic acid 0
                                                  all-trans-4,16-dihydroxyretinoic acid 0
                                                  all-trans-4,18-dihydroxyretinoic acid 0
                                                  all-trans-4-hydroxyretinoic acid + 9
                                                  all-trans-4-oxo-16-hydroxyretinoic acid 0
                                                  all-trans-4-oxo-18-hydroxyretinoic acid 0
                                                  all-trans-4-oxoretinoic acid + 108
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