Send us a Message



Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   

CHEBI ONTOLOGY - ANNOTATIONS

The Chemical Entities of Biological Interest (ChEBI) ontology is downloaded weekly from EMBL-EBI at http://www.ebi.ac.uk/chebi/. The data is made available under the Creative Commons License (CC BY 3.0, http://creativecommons.org/licenses/by/3.0/). For more information see: Degtyarenko et al. (2008) ChEBI: a database and ontology for chemical entities of biological interest. Nucleic Acids Res. 36, D344–D350.

Term:vernakalant
go back to main search page
Accession:CHEBI:135956 term browser browse the term
Synonyms:related_synonym: Formula=C20H31NO4;   InChI=1S/C20H31NO4/c1-23-19-8-7-15(13-20(19)24-2)10-12-25-18-6-4-3-5-17(18)21-11-9-16(22)14-21/h7-8,13,16-18,22H,3-6,9-12,14H2,1-2H3/t16-,17-,18-/m1/s1;   InChIKey=VBHQKCBVWWUUKN-KZNAEPCWSA-N;   RSD1235;   SMILES=O(CCC1=CC(OC)=C(C=C1)OC)[C@H]2[C@@H](CCCC2)N3CC[C@H](C3)O;   brinavess;   vernakalant HCl;   vernakalant hydrochloride
 xref: CAS:794466-70-9;   Drug_Central:4365
 xref_mesh: MESH:C524581



show annotations for term's descendants           Sort by:
vernakalant term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cyp2d4 cytochrome P450, family 2, subfamily d, polypeptide 4 increases metabolic processing ISO CYP2D6 protein results in increased metabolism of vernakalant CTD PMID:18927241 NCBI chr 7:113,882,584...113,891,754
Ensembl chr 7:113,881,618...113,891,759
JBrowse link
G Kcna5 potassium voltage-gated channel subfamily A member 5 affects binding
multiple interactions
ISO vernakalant binds to KCNA5 protein
vernakalant binds to and results in decreased activity of KCNA5 protein
CTD PMID:17872968 PMID:19713139 NCBI chr 4:159,354,689...159,358,173
Ensembl chr 4:159,350,097...159,357,697
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  CHEBI ontology 19880
    chemical entity 19878
      molecular entity 19878
        polyatomic entity 19830
          heteroatomic molecular entity 19787
            hydroxides 19347
              organic hydroxy compound 18957
                alcohol 15719
                  vernakalant 2
Path 2
Term Annotations click to browse term
  CHEBI ontology 19880
    subatomic particle 19878
      composite particle 19878
        hadron 19878
          baryon 19878
            nucleon 19878
              atomic nucleus 19878
                atom 19878
                  main group element atom 19817
                    p-block element atom 19817
                      carbon group element atom 19757
                        carbon atom 19754
                          organic molecular entity 19754
                            organic molecule 19706
                              organic cyclic compound 19495
                                organic aromatic compound 19360
                                  phenols 18655
                                    vernakalant 2
paths to the root