Each pathway diagram contains links to genes and related pathways. Additional diagrams will be added on a regular basis, so check back often.

classic metabolic pathway

• citrate cycle pathway
• gluconeogenesis pathway
• glycolysis pathway
• glycogen biosynthetic pathway
• glycogen degradation pathway
• hexosamine biosynthetic pathway
• pentose phosphate pathway
• pyruvate metabolic pathway

signaling pathway

• adenosine monophosphate-activated protein kinase (AMPK) signaling pathway
• canonical Wnt signaling pathway
  • altered canonical Wnt signaling pathway
• insulin signaling pathway
  • altered insulin signaling pathway
• integrin mediated signaling pathway
• Jak-Stat signaling pathway
• leptin system pathway 
• mitogen activated protein kinase signaling pathway 
  • c-Jun N-terminal kinases MAPK signaling pathway
  • Erk5 MAPK signaling pathway 
  • the extracellular signal-regulated Raf/Mek/Erk signaling pathway 
  • p38 MAPK signaling pathway
• mTOR signaling pathway
• Notch signaling pathway
• nuclear factor kappa B signaling pathway
• phosphatidylinositol 3-kinase-Akt signaling pathway 
• the planar cell polarity Wnt signaling pathway
• protein kinase A (PKA) signaling pathway
• scatter factor/hepatocyte growth factor signaling pathway 
• transforming growth factor-beta Smad dependent signaling pathway
  • altered transforming growth factor-beta Smad dependent signaling pathway
• tumor necrosis factor mediated signaling pathway
• vascular endothelial growth factor signaling pathway
• vasopressin signaling pathway

regulatory pathway

• insulin responsive facilitative sugar transporter mediated glucose transport pathway
• insulin secretion pathway
  • altered insulin secretion pathway
• intrinsic apoptotic pathway
• mismatch repair pathway

disease pathway

• colorectal cancer pathway
• type 2 diabetes mellitus pathway

Each term links to its ontology report.  Select the tree icon () to view a list of other pathways in that category 

classic metabolic pathway
altered metabolic pathway +
amines and polyamines metabolic pathway +
amino acid metabolic pathway +
carbohydrate metabolic pathway +
energy metabolic pathway +
glycan metabolic pathway +
lipid metabolic pathway +
metabolic pathway of cofactors and vitamins +
metabolic pathway of other amino acids +
metabolic pathway of prosthetic groups, electron carriers and reductants +
metabolic pathway of secondary metabolites +
metabolic pathway pertinent to the brain +
nucleotide metabolic pathway +
xenobiotics biodegradation pathway +
disease pathway
cardiovascular disease pathway +
cerebrovascular disease pathway +
diabetes pathway +
neurodegenerative disease pathway +
neurological disorder disease pathway +
neuropsychiatric disease pathway +
obesity disease pathway
renal disease, renal disorder pathway +
regulatory pathway
altered regulatory pathway +
cell death pathway +
cellular detoxification pathway +
homeostasis pathway +
immune response pathway +
pathways of protein folding, sorting, modification, degradation +
pathways of replication, gene expression, protein biosynthesis +
stress response pathway +
transport pathway +
signaling pathway
G protein signaling pathway +
Hedgehog signaling pathway +
JAK-STAT signaling pathway +
Wnt signaling pathway +
adenosine monophosphate-activated protein kinase (AMPK) signaling pathway
altered signaling pathway +
apelin signaling pathway
calcium/calmodulin dependent signaling pathway +
cell-cell signaling pathway +
cytokine and chemokine signaling pathway +
growth factor signaling pathway +
hormone signaling pathway +
kallikrein-kinin system signaling pathway
mTOR signaling pathway +
mitogen activated protein kinase signaling pathway +
pathway pertinent to signaling in the brain +
renin-angiotensin system signaling pathway +
signaling pathways involving second messengers +
small G proteins - the Ras superfamily signaling pathway +