Gene: Pdx1 (pancreatic and duodenal homeobox 1) Rattus norvegicus
Symbol: Pdx1
Name: pancreatic and duodenal homeobox 1
Description: ENCODES a protein that exhibits core promoter sequence-specific DNA binding; protein complex binding; protein heterodimerization activity; INVOLVED IN cell differentiation; central nervous system development; detection of glucose; PARTICIPATES IN forkhead class A signaling pathway; maturity onset diabetes of the young pathway; type 2 diabetes mellitus pathway; ASSOCIATED WITH Diabetes Mellitus, Experimental; Diabetes Mellitus, Type 2; Fetal Growth Retardation; FOUND IN cytoplasm; nucleus; intracellular (ortholog); INTERACTS WITH 17beta-estradiol; 9-cis-retinoic acid; aldehydo-D-glucose
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: IDX-1; Idx1; Insulin promoter factor 1; insulin promotor factor 1; IPF-1; Ipf1; islet/duodenum homeobox 1; islet/duodenum homeobox-1; pancreas/duodenum homeobox protein 1; pancreatic and duodenal homeobox gene 1; somatostatin transactivating factor 1; somatostatin-transactivating factor 1; STF-1; Stf1
Orthologs:
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
NCBI Annotation Information: Annotation category: partial on reference assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0129,496,044 - 9,501,211 (-)NCBIRnor6.0rn6Rnor6.0
Rnor_5.01211,609,488 - 11,614,655 (-)NCBIRnor5.0rn5Rnor5.0
Celera129,495,501 - 9,500,668 (-)NCBI
Cytogenetic Map12 NCBImapview
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated
RGD Disease Portals

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants

Additional Information

External Database Links
Nomenclature History
RGD Curation Notes
 
More on Pdx1
Entrez Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Map Viewer
Vista
Vista + UCSC

RGD Object Information
RGD ID: 62387
Created: 2001-04-26
Species: Rattus norvegicus
Last Modified: 2016-05-10
Status: ACTIVE