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Gene-Chemical Interaction Annotations
Gene-Chemical Interaction AnnotationsTerm | Qualifier | Evidence | With | Reference | Notes | Source | Original Reference(s) | 17alpha-ethynylestradiol | affects expression | EXP | | 6480464 | Ethinyl Estradiol affects the expression of KRT5 mRNA | CTD | PMID:20170705 | 17alpha-ethynylestradiol | affects expression | ISO | RGD:727894 | 6480464 | Ethinyl Estradiol affects the expression of KRT5 mRNA | CTD | PMID:17351261 | 17alpha-ethynylestradiol | increases expression | ISO | RGD:727894 | 6480464 | Ethinyl Estradiol results in increased expression of KRT5 mRNA | CTD | PMID:15576828 | 17alpha-ethynylestradiol | affects expression | ISO | RGD:1553117 | 6480464 | Ethinyl Estradiol affects the expression of KRT5 mRNA | CTD | PMID:17555576 | 17beta-estradiol | decreases expression | EXP | | 6480464 | Estradiol results in decreased expression of KRT5 mRNA | CTD | PMID:23019147 | 3,3',4,4'-tetrachlorobiphenyl | multiple interactions | ISO | RGD:1553117 | 6480464 | 3,4,3',4'-tetrachlorobiphenyl inhibits the reaction [Dietary Fats results in increased expression of KRT5 mRNA] | CTD | PMID:19467301 | 4,4'-diaminodiphenylmethane | decreases expression | ISO | RGD:1553117 | 6480464 | 4,4'-diaminodiphenylmethane results in decreased expression of KRT5 mRNA | CTD | PMID:18648102 | 5-aza-2'-deoxycytidine | increases expression | EXP | | 6480464 | decitabine results in increased expression of KRT5 mRNA | CTD | PMID:17908484 | 5-fluorouracil | affects response to substance | EXP | | 6480464 | KRT5 protein affects the susceptibility to Fluorouracil | CTD | PMID:15352031 | 5-fluorouracil | decreases expression | EXP | | 6480464 | Fluorouracil results in decreased expression of KRT5 protein | CTD | PMID:15352031 | 7,12-dimethyltetraphene | multiple interactions | ISO | RGD:727894 | 6480464 | [9,10-Dimethyl-1,2-benzanthracene co-treated with Isoflavones] results in increased expression of KRT5 protein | CTD | PMID:22248470 | 7,12-dimethyltetraphene | increases expression | ISO | RGD:727894 | 6480464 | 9,10-Dimethyl-1,2-benzanthracene results in increased expression of KRT5 mRNA | CTD | PMID:12376462 | 9-cis-retinoic acid | decreases expression | EXP | | 6480464 | alitretinoin results in decreased expression of KRT5 mRNA | CTD | PMID:15982314 | all-trans-retinoic acid | decreases expression | EXP | | 6480464 | Tretinoin metabolite results in decreased expression of KRT5 mRNA; more ... | CTD | PMID:15982314 | ammonium chloride | affects expression | ISO | RGD:727894 | 6480464 | Ammonium Chloride affects the expression of KRT5 mRNA | CTD | PMID:16483693 | andrographolide | multiple interactions | ISO | RGD:1553117 | 6480464 | [andrographolide co-treated with beta-Naphthoflavone] results in increased expression of KRT5 mRNA | CTD | PMID:19737545 | arsenite(3-) | increases expression | EXP | | 6480464 | arsenite results in increased expression of KRT5 protein; more ... | CTD | PMID:22011395 | benzo[a]pyrene | increases expression | ISO | RGD:1553117 | 6480464 | Benzo(a)pyrene results in increased expression of KRT5 mRNA | CTD | PMID:21715664 PMID:19770486 | benzo[a]pyrene | increases expression | ISO | RGD:1553117 | 6480464 | Benzo(a)pyrene results in increased expression of KRT5 mRNA | CTD | PMID:19770486 PMID:21715664 | benzo[a]pyrene | increases expression | ISO | RGD:1553117 | 6480464 | Benzo(a)pyrene results in increased expression of KRT5 mRNA | CTD | PMID:21715664 | bis(2-chloroethyl) sulfide | multiple interactions | EXP | | 6480464 | Mustard Gas promotes the reaction [KRT14 protein binds to KRT5 protein]; more ... | CTD | PMID:14644625 | bis(2-chloroethyl) sulfide | increases phosphorylation | EXP | | 6480464 | Mustard Gas results in increased phosphorylation of KRT5 protein | CTD | PMID:19845377 | bis(2-chloroethyl) sulfide | increases alkylation | EXP | | 6480464 | Mustard Gas results in increased alkylation of KRT5 protein | CTD | PMID:18342354 | bisphenol A | affects expression | EXP | | 6480464 | bisphenol A affects the expression of KRT5 mRNA | CTD | PMID:20170705 | cadmium atom | increases expression | EXP | | 6480464 | Cadmium results in increased expression of KRT5 protein | CTD | PMID:20049202 | chlorogenic acid | increases expression | EXP | | 6480464 | Chlorogenic Acid results in increased expression of KRT5 mRNA | CTD | PMID:20706672 | choline | multiple interactions | ISO | RGD:1553117 | 6480464 | [Methionine deficiency co-treated with Choline deficiency co-treated with Folic Acid deficiency] results in increased expression of KRT5 mRNA | CTD | PMID:20938992 | diuron | increases expression | ISO | RGD:727894 | 6480464 | Diuron results in increased expression of KRT5 mRNA | CTD | PMID:21551480 | folic acid | multiple interactions | ISO | RGD:1553117 | 6480464 | [Methionine deficiency co-treated with Choline deficiency co-treated with Folic Acid deficiency] results in increased expression of KRT5 mRNA | CTD | PMID:20938992 | genistein | increases expression | ISO | RGD:727894 | 6480464 | Genistein results in increased expression of KRT5 mRNA | CTD | PMID:17341692 | genistein | decreases expression | EXP | | 6480464 | Genistein results in decreased expression of KRT5 mRNA | CTD | PMID:20706672 | imatinib | increases expression | EXP | | 6480464 | imatinib results in increased expression of KRT5 protein | CTD | PMID:15764042 | isotretinoin | decreases expression | EXP | | 6480464 | Isotretinoin results in decreased expression of KRT5 mRNA | CTD | PMID:15982314 | L-methionine | multiple interactions | ISO | RGD:1553117 | 6480464 | [Methionine deficiency co-treated with Choline deficiency co-treated with Folic Acid deficiency] results in increased expression of KRT5 mRNA | CTD | PMID:20938992 | morphine | decreases expression | ISO | RGD:727894 | 6480464 | Morphine results in decreased expression of KRT5 protein | CTD | PMID:23056601 | N-nitrosodiethylamine | multiple interactions | ISO | RGD:727894 | 6480464 | [Phenobarbital co-treated with Diethylnitrosamine] results in increased expression of KRT5 protein | CTD | PMID:20935162 | paracetamol | decreases expression | EXP | | 6480464 | Acetaminophen results in decreased expression of KRT5 mRNA | CTD | PMID:22230336 | phenobarbital | multiple interactions | ISO | RGD:727894 | 6480464 | [Phenobarbital co-treated with Diethylnitrosamine] results in increased expression of KRT5 protein | CTD | PMID:20935162 | resveratrol | increases expression | EXP | | 6480464 | resveratrol results in increased expression of KRT5 mRNA | CTD | PMID:20706672 | tamoxifen | affects expression | ISO | RGD:1553117 | 6480464 | Tamoxifen affects the expression of KRT5 mRNA | CTD | PMID:17555576 | trans-resveratrol | increases expression | EXP | | 6480464 | resveratrol results in increased expression of KRT5 mRNA | CTD | PMID:20706672 | | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Gene Ontology Annotations
Molecular Pathway Annotations| External Database Links | |
| Pathway Interaction Database | Glucocorticoid receptor regulatory network (PID:200091) |
| Validated transcriptional targets of deltaNp63 isoforms (PID:200186) | |
Disease Annotations
Gene-Chemical Interaction Annotations
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Gene Ontology Annotations
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Molecular Pathway Annotations| External Database Links | |
| Pathway Interaction Database | Glucocorticoid receptor regulatory network (PID:200091) |
| Validated transcriptional targets of deltaNp63 isoforms (PID:200186) | |
References - curated| 1. |
GOA_HUMAN data from the GO Consortium |
| 2. |
Lane EB, etal., Nature. 1992 Mar 19;356(6366):244-6. |
| 3. |
Nan L, etal., Cancer Lett. 1993 Dec 10;75(2):87-93. |
| 4. |
RGD automated import pipeline for gene-chemical interactions |
| 5. |
RGD Automated Pipelines |
References - uncurated| PubMed | 10234505 |
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RGD Disease Portals
Comparative Map Data| KRT5 (Homo sapiens) |
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| Krt5 (Mus musculus) |
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| Krt5 (Rattus norvegicus) |
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Position Markers| D12S759 |
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| SHGC-153281 |
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| STS-D29027 |
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| D12S2098 |
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| RH77823 |
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QTLs in Region (Human Genome Assembly GRCh37)| The following QTLs overlap with this region. | ![]() | Full Report | ![]() | CSV | ![]() | TAB | ![]() | Printer | ![]() | Gviewer |
Nucleotide Sequences| Nucleotide RefSeqs | NG_008297 | (Get FASTA) | Search GEO for Microarray Profiles |
| NM_000424 | (Get FASTA) | Search GEO for Microarray Profiles | |
| GenBank Nucleotide | ABBA01008292 | (Get FASTA) | Search GEO for Microarray Profiles |
| AC055736 | (Get FASTA) | Search GEO for Microarray Profiles | |
| AF274874 | (Get FASTA) | Search GEO for Microarray Profiles | |
| AK093720 | (Get FASTA) | Search GEO for Microarray Profiles | |
| AK296823 | (Get FASTA) | Search GEO for Microarray Profiles | |
| AK303972 | (Get FASTA) | Search GEO for Microarray Profiles | |
| AK310827 | (Get FASTA) | Search GEO for Microarray Profiles | |
| AMYH01004474 | (Get FASTA) | Search GEO for Microarray Profiles | |
| AY373434 | (Get FASTA) | Search GEO for Microarray Profiles | |
| BC024292 | (Get FASTA) | Search GEO for Microarray Profiles | |
| BC042132 | (Get FASTA) | Search GEO for Microarray Profiles | |
| BC071906 | (Get FASTA) | Search GEO for Microarray Profiles | |
| CH471054 | (Get FASTA) | Search GEO for Microarray Profiles | |
| D50666 | (Get FASTA) | Search GEO for Microarray Profiles | |
| M19723 | (Get FASTA) | Search GEO for Microarray Profiles | |
| M21389 | (Get FASTA) | Search GEO for Microarray Profiles | |
| M28496 | (Get FASTA) | Search GEO for Microarray Profiles | |
| S56203 | (Get FASTA) | Search GEO for Microarray Profiles |
| RefSeq Acc Id: | NM_000424 | |||||||||||||||||||||||||
| RefSeq Status: | REVIEWED | |||||||||||||||||||||||||
| Type: | CODING | |||||||||||||||||||||||||
| Protein Acc Id: | NP_000415 | |||||||||||||||||||||||||
| Position: |
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Protein Sequences| Protein RefSeqs | NP_000415 | (Get FASTA) |
| GenBank Protein | AAA36143 | (Get FASTA) |
| AAA36145 | (Get FASTA) | |
| AAD14917 | (Get FASTA) | |
| AAF97931 | (Get FASTA) | |
| AAH24292 | (Get FASTA) | |
| AAH42132 | (Get FASTA) | |
| AAH71906 | (Get FASTA) | |
| AAQ81588 | (Get FASTA) | |
| ABM83772 | (Get FASTA) | |
| ABM87091 | (Get FASTA) | |
| BAA09320 | (Get FASTA) | |
| BAG59394 | (Get FASTA) | |
| BAG64893 | (Get FASTA) | |
| EAW96632 | (Get FASTA) | |
| EAW96633 | (Get FASTA) | |
| EAW96634 | (Get FASTA) | |
| EAW96635 | (Get FASTA) | |
| P13647 | (Get FASTA) |
Promoters| RGD ID: | 6852612 | ||||||||||
| Promoter ID: | EP74118 | ||||||||||
| Type: | multiple initiation site | ||||||||||
| Name: | HS_KRT5 | ||||||||||
| Description: | Keratin 5 (epidermolysis bullosa simplex, types)-Meara/Kobner/Weber-Cockayne types). | ||||||||||
| SO ACC ID: | SO:0000170 | ||||||||||
| Source: | EPD (Eukaryotic Promoter Database, http://epd.vital-it.ch/) | ||||||||||
| Experiment Methods: | Mammalian gene collection (MGC) full-length cDNA cloning | ||||||||||
| Position: |
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External Database Links| Database | Acc Id | Source(s) |
| COSMIC | KRT5 | COSMIC |
| Ensembl Genes | ENSG00000186081 | ENTREZGENE |
| Ensembl Protein | ENSP00000252242 | ENTREZGENE |
| Ensembl Transcript | ENST00000252242 | ENTREZGENE |
| Entrez Gene | 3852 | ENTREZGENE |
| Germonline | ENSG00000186081 | |
| HGNC ID | 6442 | ENTREZGENE |
| HomoloGene Group ID | 55461 | ENTREZGENE |
| HPRD ID | 01010 | ENTREZGENE |
| InterPro | Intermediate_filament_CS | UniProtKB/Swiss-Prot |
| IPR001664 | UniProtKB/Swiss-Prot | |
| IPR016044 | UniProtKB/Swiss-Prot | |
| Keratin_II | UniProtKB/Swiss-Prot | |
| IPI | IPI00009867 | UniProtKB/Swiss-Prot |
| IPI01020679 | UniProtKB/TrEMBL | |
| IPI01022815 | UniProtKB/TrEMBL | |
| IPI01023004 | UniProtKB/TrEMBL | |
| KEGG Report | hsa:3852 | ENTREZGENE, UniProtKB/Swiss-Prot |
| OMIM | 131760 | OMIM |
| 131800 | OMIM | |
| 131900 | OMIM | |
| 131960 | OMIM | |
| 148040 | OMIM | |
| 179850 | OMIM | |
| 609352 | OMIM | |
| PANTHER | Keratin_II | UniProtKB/Swiss-Prot |
| PTHR23239 | UniProtKB/Swiss-Prot | |
| Pfam | Filament | UniProtKB/Swiss-Prot |
| PharmGKB | PA30230 | PharmGKB |
| PRINTS | TYPE2KERATIN | UniProtKB/Swiss-Prot |
| PROSITE | PS00226 | UniProtKB/Swiss-Prot |
| UniGene | Hs.433845 | ENTREZGENE |
| UniProt | F8VU69_HUMAN | UniProtKB/TrEMBL |
| F8VV57_HUMAN | UniProtKB/TrEMBL | |
| F8W0C6_HUMAN | UniProtKB/TrEMBL | |
| H0YI76_HUMAN | UniProtKB/TrEMBL | |
| H0YIN9_HUMAN | UniProtKB/TrEMBL | |
| K2C5_HUMAN | UniProtKB/Swiss-Prot |
Nomenclature History| Date | Current Symbol | Current Name | Previous Symbol | Previous Name | Description | Reference | Status |
|---|---|---|---|---|---|---|---|
| 2011-08-16 | KRT5 | keratin 5 | KRT5 | keratin 5 | Symbol and/or name change | 39860 | APPROVED |
| More on KRT5 | |||
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Entrez Gene | ||
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Ensembl Gene | ||
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HGNC Report | ||
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NCBI Map Viewer | ||
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Vista | ||
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Vista + UCSC | ||
| RGD Object Information | |
| RGD ID: | 1343872 |
| Created: | 2005-03-08 |
| Species: | Homo sapiens |
| Last Modified: | 2013-04-16 |
| Status: | ACTIVE |
© Bioinformatics Program, HMGC at the Medical College of Wisconsin
RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.




